View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0931_low_58 (Length: 251)

Name: NF0931_low_58
Description: NF0931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0931_low_58
NF0931_low_58
[»] chr3 (9 HSPs)
chr3 (41-107)||(47509042-47509108)
chr3 (41-88)||(11233926-11233973)
chr3 (41-103)||(43176309-43176371)
chr3 (41-103)||(42424345-42424407)
chr3 (41-107)||(22153974-22154040)
chr3 (41-107)||(622354-622420)
chr3 (41-103)||(35425567-35425629)
chr3 (41-82)||(46473263-46473304)
chr3 (43-107)||(37323777-37323841)
[»] chr5 (11 HSPs)
chr5 (41-107)||(18638736-18638802)
chr5 (41-104)||(21062895-21062958)
chr5 (41-103)||(33743228-33743290)
chr5 (41-107)||(3722971-3723037)
chr5 (41-107)||(27340979-27341045)
chr5 (45-107)||(8725315-8725377)
chr5 (41-107)||(34952300-34952366)
chr5 (41-88)||(30301339-30301386)
chr5 (41-88)||(39840598-39840645)
chr5 (41-106)||(14914481-14914546)
chr5 (41-106)||(20125501-20125566)
[»] chr7 (8 HSPs)
chr7 (41-93)||(36186789-36186841)
chr7 (41-107)||(30391256-30391322)
chr7 (41-107)||(17500807-17500873)
chr7 (41-107)||(17552341-17552407)
chr7 (41-106)||(31436528-31436592)
chr7 (41-107)||(47644819-47644885)
chr7 (41-88)||(5724167-5724214)
chr7 (41-107)||(49089059-49089125)
[»] chr6 (7 HSPs)
chr6 (41-107)||(7693425-7693491)
chr6 (41-107)||(28647330-28647396)
chr6 (41-107)||(30622134-30622200)
chr6 (41-107)||(2333485-2333551)
chr6 (41-103)||(3821518-3821580)
chr6 (41-107)||(19788971-19789037)
chr6 (41-107)||(9200220-9200286)
[»] chr4 (10 HSPs)
chr4 (41-107)||(10096637-10096703)
chr4 (41-79)||(41154166-41154204)
chr4 (41-107)||(42516744-42516810)
chr4 (41-107)||(11012235-11012301)
chr4 (41-107)||(17363340-17363406)
chr4 (41-107)||(29525968-29526034)
chr4 (41-107)||(34114012-34114078)
chr4 (41-93)||(7795124-7795176)
chr4 (41-93)||(42882579-42882631)
chr4 (41-81)||(45274399-45274439)
[»] chr1 (18 HSPs)
chr1 (41-83)||(21154357-21154399)
chr1 (41-107)||(30530294-30530360)
chr1 (41-107)||(4511672-4511738)
chr1 (41-107)||(33669718-33669784)
chr1 (41-107)||(49596351-49596417)
chr1 (41-103)||(51250186-51250248)
chr1 (41-107)||(52369006-52369072)
chr1 (41-89)||(50884665-50884713)
chr1 (45-84)||(44503553-44503592)
chr1 (41-107)||(34002215-34002281)
chr1 (45-103)||(42792397-42792455)
chr1 (44-105)||(5315323-5315384)
chr1 (41-107)||(8464408-8464474)
chr1 (41-107)||(24611954-24612020)
chr1 (41-107)||(33422114-33422180)
chr1 (41-107)||(44112564-44112630)
chr1 (41-83)||(50017318-50017360)
chr1 (41-107)||(52417641-52417707)
[»] scaffold0072 (1 HSPs)
scaffold0072 (41-107)||(14444-14510)
[»] chr8 (9 HSPs)
chr8 (41-107)||(34996255-34996321)
chr8 (46-107)||(5642290-5642351)
chr8 (46-107)||(5644231-5644292)
chr8 (41-93)||(11155777-11155829)
chr8 (41-107)||(323975-324041)
chr8 (41-88)||(9550318-9550365)
chr8 (41-88)||(27631076-27631123)
chr8 (41-106)||(7129644-7129709)
chr8 (41-105)||(8074620-8074684)
[»] chr2 (7 HSPs)
chr2 (41-107)||(11442782-11442848)
chr2 (41-107)||(42665707-42665773)
chr2 (41-106)||(36909738-36909803)
chr2 (41-88)||(42554903-42554950)
chr2 (41-107)||(546280-546346)
chr2 (41-91)||(38912496-38912546)
chr2 (41-105)||(7497886-7497950)
[»] scaffold0020 (1 HSPs)
scaffold0020 (41-107)||(156016-156082)
[»] scaffold0154 (1 HSPs)
scaffold0154 (41-88)||(4443-4490)
[»] scaffold0057 (1 HSPs)
scaffold0057 (41-107)||(21469-21535)


Alignment Details
Target: chr3 (Bit Score: 59; Significance: 4e-25; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 47509042 - 47509108
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  47509042 tgatatatgtacaaccatttgatacaactttgatgacaatttttatttgttcttttcttattggtcc 47509108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 11233926 - 11233973
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttattt 88  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11233926 tgatatatgtacaaccatttggtacaactttgatgacaacttttattt 11233973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 43176371 - 43176309
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattg 103  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| ||| || ||||||    
T  43176371 tgatatatatacaaccatttgatacaactttgatgataacttttatttgctctctttttattg 43176309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 42424407 - 42424345
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattg 103  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| |||| |||| |||| ||||    
T  42424407 tgatatatgtacatccatttggtacaactttgatgacaactttcatttattctcttctcattg 42424345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 22154040 - 22153974
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||| |||||||||||||| ||||||||| ||||||||||| ||||| ||| || | ||||||||    
T  22154040 tgatatttgtacaaccatttggtacaactttaatgacaactttcatttgctctcttttcattggtcc 22153974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 622354 - 622420
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||  |||||||||||  ||||||||| |||||||||||||||  ||| |||| ||||||||    
T  622354 tgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtcc 622420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 35425567 - 35425629
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattg 103  Q
    ||||||||||| || |||||| |||| |||||||||||||||| ||||| ||| |||| ||||    
T  35425567 tgatatatgtataatcatttggtacatctttgatgacaactttcatttgctctcttctcattg 35425629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 46473304 - 46473263
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaactt 82  Q
    |||||| || ||||||||||||||||||||| ||||||||||    
T  46473304 tgatatttgaacaaccatttgatacaacttttatgacaactt 46473263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 37323841 - 37323777
Alignment:
Q  43 atatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||| |||||  |||||||||||||||| ||| ||||  ||  |||||||||||||    
T  37323841 atatatgtacaactatttgggacaactttgatgacaattttcattttctcccttcttattggtcc 37323777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 18638736 - 18638802
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||  ||| |||||||||||||    
T  18638736 tgatatatgtacaaccatttgggacaactttgatgacaacttttattttctcttttcttattggtcc 18638802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 21062958 - 21062895
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattgg 104  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| ||||| ||| ||||||||||    
T  21062958 tgatatatgtacaaccatttggtacaattttgatgacaactttcatttgctcttttcttattgg 21062895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 33743228 - 33743290
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattg 103  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||| ||| |||| ||||    
T  33743228 tgatatatgtacaatcatttggtacaactttgatgacaacttttatttgctctcttctcattg 33743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 3722971 - 3723037
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||  ||| || ||||||||||    
T  3722971 tgatatatgtacaaccatttgggacaactttgatgacaactttcattttctctctttttattggtcc 3723037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 27341045 - 27340979
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||| |||||| ||||| ||||||||||||||| ||||| ||| || ||||||||||    
T  27341045 tgatatatgtacaatcatttggtacaattttgatgacaactttcatttgctctctttttattggtcc 27340979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 8725315 - 8725377
Alignment:
Q  45 atatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||| ||||||||||||  |||||||||||||||||||| ||||  ||| |||||||||||||    
T  8725315 atatatacaaccatttgggacaactttgatgacaactttcattttctcttttcttattggtcc 8725377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 34952300 - 34952366
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||||  |||||  | |||||||||||||||||||||||  ||| |||||||||||||    
T  34952300 tgatatatgtacaattatttgggataactttgatgacaacttttattttctctcttcttattggtcc 34952366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 30301386 - 30301339
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttattt 88  Q
    |||||||||||||||||| ||  |||||||||||||||||||| ||||    
T  30301386 tgatatatgtacaaccatatgtaacaactttgatgacaactttcattt 30301339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 39840598 - 39840645
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttattt 88  Q
    ||||||||||||||| |||||  | |||||||||||||||||||||||    
T  39840598 tgatatatgtacaactatttgtgataactttgatgacaacttttattt 39840645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 14914546 - 14914481
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtc 106  Q
    |||||| |||||| |||||| ||| ||||||||||||||||||  |||  ||| ||||||||||||    
T  14914546 tgatatttgtacatccatttcatataactttgatgacaactttgtttttatctcttcttattggtc 14914481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 20125566 - 20125501
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtc 106  Q
    |||||||| |||||| |||||  |||||||||||||||||||| ||||  ||| |||| |||||||    
T  20125566 tgatatatatacaactatttgggacaactttgatgacaactttcattttctctcttctcattggtc 20125501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 36186789 - 36186841
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttct 93  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  36186789 tgatatatgtacaaccatttggtataactttgatgacaacttttatttgttct 36186841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 30391322 - 30391256
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||  ||| |||| ||||||||    
T  30391322 tgatatatgtacaatcatttggtacaactttgatgacaacttttatttactctcttctcattggtcc 30391256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 17500873 - 17500807
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||||||||||  ||||||||||||| |||||| ||||  ||| |||||||||||||    
T  17500873 tgatatatgtacaaccatttgggacaactttgatgataactttcattttctctcttcttattggtcc 17500807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 17552341 - 17552407
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||||||||||  ||||||||||||| |||||| ||||  ||| |||||||||||||    
T  17552341 tgatatatgtacaaccatttgggacaactttgatgataactttcattttctctcttcttattggtcc 17552407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 31436592 - 31436528
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtc 106  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||  ||| |||| |||||||    
T  31436592 tgatatatgtacaaccatttgatacaa-tttgatgacaactttcattttatctcttctcattggtc 31436528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 47644885 - 47644819
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||||  ||||| || |||||||||||||||||| ||||| ||| |||| ||||||||    
T  47644885 tgatatatgtacaattatttggtataactttgatgacaactttcatttgctctcttctcattggtcc 47644819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 5724214 - 5724167
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttattt 88  Q
    |||||||||||||||||||| | |||| || |||||||||||||||||    
T  5724214 tgatatatgtacaaccatttaagacaaattggatgacaacttttattt 5724167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 49089059 - 49089125
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||||| ||||   |||||||||||||||||||| ||||  ||| |||| ||||||||    
T  49089059 tgatatatgtacaacaatttctgacaactttgatgacaactttcattttctctcttctcattggtcc 49089125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 7693491 - 7693425
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||||||||||  |||||||||||||||| ||||||||  ||| |||||||||||||    
T  7693491 tgatatatgtacaaccatttgggacaactttgatgacaatttttattttctctcttcttattggtcc 7693425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 28647330 - 28647396
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||| ||||||| |||||||||| |||||||||| ||||||||| |||| ||||||||    
T  28647330 tgatatatgtacatccatttggtacaactttgttgacaactttaatttgttctcttctcattggtcc 28647396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 30622200 - 30622134
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||||| |||||  |||||||||||||||||||| |||| |||| |||||||||||||    
T  30622200 tgatatatgtacaactatttgggacaactttgatgacaactttcattttttctcttcttattggtcc 30622134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 2333551 - 2333485
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||| ||||||| |||| ||||||||||| ||||||||  ||| |||||||| ||||    
T  2333551 tgatatatgtacaatcatttgaaacaattttgatgacaatttttattttctctcttcttattagtcc 2333485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 3821580 - 3821518
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattg 103  Q
    |||||||||||||  |||||| || |||||||||||||| ||||||||||||| |||| ||||    
T  3821580 tgatatatgtacattcatttggtataactttgatgacaatttttatttgttctcttctcattg 3821518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 19788971 - 19789037
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||||||||||  |||||||||||||||||| | ||||  ||| |||| ||||||||    
T  19788971 tgatatatgtacaaccatttgggacaactttgatgacaactctgattttctctcttctcattggtcc 19789037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 9200286 - 9200220
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||| ||||||||||| |   |||||||||||||||||||||||||  ||| ||| |||||||||    
T  9200286 tgatatttgtacaaccatatctaacaactttgatgacaacttttatttactctcttcctattggtcc 9200220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 10096637 - 10096703
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| ||||| ||| |||| ||||||||    
T  10096637 tgatatatgtacagccatttggtacaactttgatgacaactttcatttgctctcttctcattggtcc 10096703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 41154204 - 41154166
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaa 79  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41154204 tgatatatgtacaaccatttgatacaactttgatgacaa 41154166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 42516810 - 42516744
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||||||||||  |||| ||||||||||||||| |||| |||| |||| ||||||||    
T  42516810 tgatatatgtacaaccatttgtgacaattttgatgacaactttcattttttctcttctcattggtcc 42516744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 11012301 - 11012235
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||| ||| ||  |||||||||||||||||||| ||||  ||| |||||||||||||    
T  11012301 tgatatatgtacaatcatatgtgacaactttgatgacaactttcattttctcttttcttattggtcc 11012235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 17363406 - 17363340
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||| |||| |||||||| |||||||||||||||||||||| ||||| ||| || | ||||||||    
T  17363406 tgatatttgtaaaaccattttatacaactttgatgacaactttcatttgctctcttttcattggtcc 17363340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 29526034 - 29525968
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||| ||||||| || || |||| |||||||||| ||||||||| |||| ||||||||    
T  29526034 tgatatatgtacatccatttggtataattttgttgacaactttaatttgttctcttctcattggtcc 29525968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 34114012 - 34114078
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||| ||||||  ||||||||||||  |||||| ||||  ||| |||||||||||||    
T  34114012 tgatatatgtacaatcatttggaacaactttgatggtaactttcattttctctcttcttattggtcc 34114078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 7795176 - 7795124
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttct 93  Q
    |||||| || |||||||||||||||||| || |||||||||||| ||| ||||    
T  7795176 tgatatttgaacaaccatttgatacaacctttatgacaacttttttttcttct 7795124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 42882631 - 42882579
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttct 93  Q
    |||||||||||||||||| ||  |||||||||||||||| ||| |||| ||||    
T  42882631 tgatatatgtacaaccatgtgtgacaactttgatgacaattttcattttttct 42882579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 45274439 - 45274399
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaact 81  Q
    ||||||||||||||| |||||  ||||||||||||||||||    
T  45274439 tgatatatgtacaactatttgggacaactttgatgacaact 45274399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 21154399 - 21154357
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttt 83  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21154399 tgatatatgtacaaccatttgatacaactttgatgacaacttt 21154357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 30530294 - 30530360
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||  ||| |||||||||||||    
T  30530294 tgatatatgtacaaccatttgggacaactttgatgacaactttcattttctctcttcttattggtcc 30530360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 4511672 - 4511738
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||||||||||  ||||||| |||||||||||| |||| |||| |||| ||||||||    
T  4511672 tgatatatgtacaaccatttgggacaacttagatgacaactttcattttttctcttctcattggtcc 4511738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 33669718 - 33669784
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||||||||||  |||||||||||||||||| | |||| |||| |||| ||||||||    
T  33669718 tgatatatgtacaaccatttgggacaactttgatgacaactctcattttttctcttctcattggtcc 33669784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 49596417 - 49596351
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||||||||||| |||||||||||||| |||||| ||||| ||  |||| ||||||||    
T  49596417 tgatatatgtacaaccatttggtacaactttgatgataactttaatttgctccattctcattggtcc 49596351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 51250186 - 51250248
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattg 103  Q
    |||||||||||||| ||||||| | |||||||||||||||||||||||  ||| |||||||||    
T  51250186 tgatatatgtacaatcatttgaaataactttgatgacaacttttattttctctcttcttattg 51250248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 52369006 - 52369072
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||||| ||||  ||||||||||||||||||||| ||||| ||| |||| ||||||||    
T  52369006 tgatatatgtacaactatttagtacaactttgatgacaactttcatttgctctattctcattggtcc 52369072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 50884665 - 50884713
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttg 89  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  50884665 tgatatatgtacaaccatttggtacaactttgatgaaaactttcatttg 50884713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 44503553 - 44503592
Alignment:
Q  45 atatgtacaaccatttgatacaactttgatgacaactttt 84  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  44503553 atatgtacaatcatttgatacaactttgatgacaactttt 44503592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 34002215 - 34002281
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||||| |||||  ||||||||||| |||||||| ||||  ||| |||||||||||||    
T  34002215 tgatatatgtacaactatttgggacaactttgatcacaactttcattttctctcttcttattggtcc 34002281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 42792455 - 42792397
Alignment:
Q  45 atatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattg 103  Q
    |||||||||| ||||| |||||||||||||||||| |||||||| |||| || ||||||    
T  42792455 atatgtacaatcattttatacaactttgatgacaatttttatttattctctttttattg 42792397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 5315384 - 5315323
Alignment:
Q  44 tatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggt 105  Q
    ||||||||||||||||| | |||||||||||||| ||||| ||||  ||| |||||||||||    
T  5315384 tatatgtacaaccattttagacaactttgatgacgactttcattttctcttttcttattggt 5315323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 8464408 - 8464474
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||||||| |||   ||||||||||||||||||| ||||  ||| || ||||||||||    
T  8464408 tgatatatgtacaaccacttgggccaactttgatgacaactttcattttctctctttttattggtcc 8464474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 24612020 - 24611954
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||| ||||||||||| |   ||||||||||||||||||||||||| |||  || ||||||||||    
T  24612020 tgatatttgtacaaccatatctaacaactttgatgacaacttttatttattcaatttttattggtcc 24611954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 33422114 - 33422180
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||  |||||||||||  ||||||||| |||||||||||||||  ||| |||| ||||||||    
T  33422114 tgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtcc 33422180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 44112630 - 44112564
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||  |||||||||||  ||||||||| |||||||||||||||  ||| |||| ||||||||    
T  44112630 tgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtcc 44112564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 50017318 - 50017360
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttt 83  Q
    |||||||||||||||||||||| ||||||||| ||| ||||||    
T  50017318 tgatatatgtacaaccatttgagacaactttgttgataacttt 50017360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 52417707 - 52417641
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||| |||||| |||||  ||||||||||||| |||||| ||||  ||| |||||||||||||    
T  52417707 tgatatatatacaactatttggaacaactttgatgataactttcattttctctcttcttattggtcc 52417641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 14444 - 14510
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||| ||||||| |||||||||| |||||| ||| ||||||||| |||| ||||||||    
T  14444 tgatatatgtacatccatttggtacaactttgttgacaattttaatttgttctcttctcattggtcc 14510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 34996255 - 34996321
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| ||||| ||| || | ||||||||    
T  34996255 tgatatatgtacaactatttggtacaactttgatgacaactttcatttgctctcttttcattggtcc 34996321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 5642290 - 5642351
Alignment:
Q  46 tatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||| |||||| | |||||||||||||||||||||||  ||| |||||||||||||    
T  5642290 tatgtacaactatttgagataactttgatgacaacttttattttctctcttcttattggtcc 5642351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 5644231 - 5644292
Alignment:
Q  46 tatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||| |||||| | |||||||||||||||||||||||  ||| |||||||||||||    
T  5644231 tatgtacaactatttgagataactttgatgacaacttttattttctctcttcttattggtcc 5644292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 11155777 - 11155829
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttct 93  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||| ||||    
T  11155777 tgatatatgtagaaccatttgtgacaactttgatgacaacttttattttttct 11155829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 323975 - 324041
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||| ||||||||||| |   |||||||||||||||||||||||||  ||| |||||||||||||    
T  323975 tgatatctgtacaaccatatctaacaactttgatgacaacttttatttactctcttcttattggtcc 324041  T

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Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 9550318 - 9550365
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttattt 88  Q
    |||||||||||||||  |||||||||||||| ||||||||||| ||||    
T  9550318 tgatatatgtacaactctttgatacaactttcatgacaactttaattt 9550365  T

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Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 27631123 - 27631076
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttattt 88  Q
    ||||||||||||||||||| |  |||||||||||||||||| ||||||    
T  27631123 tgatatatgtacaaccattggtgacaactttgatgacaactattattt 27631076  T

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Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 7129709 - 7129644
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtc 106  Q
    |||||| ||||||  ||||| ||||||||||||||||||||||  |||  ||| ||||||||||||    
T  7129709 tgatatttgtacattcatttcatacaactttgatgacaactttgtttttctctcttcttattggtc 7129644  T

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Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 8074620 - 8074684
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggt 105  Q
    |||||||||||||| ||| |   |||||||||||||||||||| ||||  ||| |||||||||||    
T  8074620 tgatatatgtacaatcatatttgacaactttgatgacaactttcattttctctcttcttattggt 8074684  T

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Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 11442848 - 11442782
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||||||| ||||||| |||||||||| |||||||||| ||||||||| || | ||||||||    
T  11442848 tgatatatgtacatccatttggtacaactttgttgacaactttaatttgttctcttttcattggtcc 11442782  T

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Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 42665707 - 42665773
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||||| ||| || | ||||||||    
T  42665707 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctcttttttcattggtcc 42665773  T

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Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 36909738 - 36909803
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtc 106  Q
    |||||| |||||| |||||| ||||||||||||||||||||||  |||  ||| ||||||||||||    
T  36909738 tgatatttgtacatccatttcatacaactttgatgacaactttgtttttctctcttcttattggtc 36909803  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 42554950 - 42554903
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttattt 88  Q
    ||||||| ||||||||||||| |||||||||||| |||||||| ||||    
T  42554950 tgatataagtacaaccatttggtacaactttgataacaactttcattt 42554903  T

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Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 546280 - 546346
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    ||||||||  |||||||||||  ||||||||| |||||||||||||||  ||| |||| ||||||||    
T  546280 tgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtcc 546346  T

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Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 38912496 - 38912546
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgtt 91  Q
    ||||||||||||||||||||| ||||||||| || | |||||| |||||||    
T  38912496 tgatatatgtacaaccatttggtacaactttaataataactttcatttgtt 38912546  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 7497886 - 7497950
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggt 105  Q
    ||||||||  |||||||||||  ||||||||| |||||||||||||||  ||| |||| ||||||    
T  7497886 tgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggt 7497950  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 156082 - 156016
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||||||||||  |||||||||||||||||| | ||||  ||| |||| ||||||||    
T  156082 tgatatatgtacaaccatttgggacaactttgatgacaactctcattttctctcttctcattggtcc 156016  T

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Target: scaffold0154 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 4490 - 4443
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttattt 88  Q
    ||||||||||||||||||| |  |||||||||||||||||| ||||||    
T  4490 tgatatatgtacaaccattggtgacaactttgatgacaactattattt 4443  T

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Target: scaffold0057 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 21469 - 21535
Alignment:
Q  41 tgatatatgtacaaccatttgatacaactttgatgacaacttttatttgttctgttcttattggtcc 107  Q
    |||||||||||||| ||||||  ||||||||||| |||||||| ||||  ||| |||| ||||||||    
T  21469 tgatatatgtacaatcatttgtgacaactttgataacaactttcattttctctcttctcattggtcc 21535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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