View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0931_low_69 (Length: 226)
Name: NF0931_low_69
Description: NF0931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0931_low_69 |
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Alignment Details
Target: chr4 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 39883092 - 39882944
Alignment:
| Q |
1 |
cagcttcaaactactttgaagttgaagaacgtcctggtataaaactaccttcatgttgtgagaccacataaggcatgatattccttattctataagccaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39883092 |
cagcttcaaactactttgaagttgaagaacgtcctggtataaaactacttgcatgttgtgagaccacataaggcatgatattccttattctataagccaa |
39882993 |
T |
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| Q |
101 |
gatttttcaaattattttatagctcgcgttacataaagcaatgggtctg |
149 |
Q |
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||||||| ||||||||||||||||| ||||||||||||||||||||||| |
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| T |
39882992 |
gattttttaaattattttatagctcacgttacataaagcaatgggtctg |
39882944 |
T |
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