View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0933_low_7 (Length: 220)

Name: NF0933_low_7
Description: NF0933
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0933_low_7
NF0933_low_7
[»] chr2 (18 HSPs)
chr2 (1-220)||(44615311-44615530)
chr2 (4-220)||(44624684-44624900)
chr2 (7-220)||(39152964-39153174)
chr2 (7-133)||(39196577-39196700)
chr2 (7-215)||(39216567-39216772)
chr2 (7-126)||(39387561-39387677)
chr2 (7-215)||(39396719-39396924)
chr2 (29-220)||(39138551-39138739)
chr2 (11-130)||(39205813-39205929)
chr2 (14-133)||(39421257-39421373)
chr2 (22-127)||(39371115-39371217)
chr2 (7-220)||(44895174-44895384)
chr2 (137-185)||(44749731-44749779)
chr2 (7-70)||(39413096-39413159)
chr2 (7-46)||(39472831-39472870)
chr2 (92-166)||(39380643-39380717)
chr2 (57-128)||(39099584-39099652)
chr2 (7-121)||(39223715-39223826)
[»] chr5 (2 HSPs)
chr5 (4-219)||(17060552-17060764)
chr5 (21-133)||(33562281-33562390)
[»] chr6 (1 HSPs)
chr6 (12-215)||(16114277-16114477)
[»] chr8 (4 HSPs)
chr8 (4-83)||(44730154-44730233)
chr8 (15-133)||(45342957-45343072)
chr8 (113-183)||(44950036-44950106)
chr8 (4-82)||(44949959-44950037)
[»] chr7 (1 HSPs)
chr7 (29-128)||(19808900-19808996)
[»] scaffold0283 (1 HSPs)
scaffold0283 (4-82)||(5939-6017)


Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 44615530 - 44615311
Alignment:
Q  1 gagcctccaaagaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44615530 gagcctccaaagaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttgg 44615431  T
Q  101 tgagattatcatcagttgttctagcagatagatccagccttcatcaataatcacagctttgtctcctttcctaggcagtggaatcgtagggtttagtatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  44615430 tgagattatcatcagttgttctagcagatagatccagccttcatcaataatcaccgctttgtctcctttcttaggcagtggaatcgtagggtttagtatt 44615331  T
Q  201 atatccaaaacaagttttgc 220  Q
    ||||||||||||||||||||    
T  44615330 atatccaaaacaagttttgc 44615311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 4 - 220
Target Start/End: Complemental strand, 44624900 - 44624684
Alignment:
Q  4 cctccaaagaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtga 103  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||   |||||||||||||    
T  44624900 cctccaaataattttcagtattttctttcatgttagctttcaactcacgcgctagcttcaatgcttcatctcttacacaaggtt---taatatttggtga 44624804  T
Q  104 gattatcatcagttgttctagcagatagatccagc---cttcatcaataatcacagctttgtctcctttcctaggcagtggaatcgtagggtttagtatt 200  Q
    |||| ||||||||| ||||||||||||||| | ||   | |||||||||||||||||||||||||||||| |||| ||||| ||  | ||||| ||||||    
T  44624803 gattgtcatcagtttttctagcagatagatgcggctttcatcatcaataatcacagctttgtctcctttcttaggaagtgggataatggggttcagtatt 44624704  T
Q  201 atatccaaaacaagttttgc 220  Q
    ||||||||||||| ||||||    
T  44624703 atatccaaaacaatttttgc 44624684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 7 - 220
Target Start/End: Complemental strand, 39153174 - 39152964
Alignment:
Q  7 ccaaagaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagat 106  Q
    ||||||||||||| ||||||||||| || ||||||||||| |||   || || ||||| ||||| ||||||||||||| ||||||    || ||||||||    
T  39153174 ccaaagaattttcagtattttcttttattttagctttcaaatcatgtgcgagtttcaatgcttcttctcttacacaaggtttaatc---ttcggtgagat 39153078  T
Q  107 tatcatcagttgttctagcagatagatccagccttcatcaataatcacagctttgtctcctttcctaggcagtggaatcgtagggtttagtattatatcc 206  Q
    | |||||||||||||||||||| |||| ||||   |||| ||||||||||| | |||||| ||| ||  | |||||||  | |||||  |||||||||||    
T  39153077 tctcatcagttgttctagcagaaagatgcagctaccatctataatcacagcatggtctccgttcttataccgtggaataattgggttctgtattatatcc 39152978  T
Q  207 aaaacaagttttgc 220  Q
    || |||| ||||||    
T  39152977 aacacaatttttgc 39152964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 39196577 - 39196700
Alignment:
Q  7 ccaaagaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagat 106  Q
    ||||||||||||| ||||| || ||||||||||||||||| ||| | ||||||||||| ||||| | ||| ||||||| ||   |||||| |||||||||    
T  39196577 ccaaagaattttcagtattgtcattcatgttagctttcaaatcaaatgctagcttcaatgcttcttttctcacacaaggtt---taatatctggtgagat 39196673  T
Q  107 tatcatcagttgttctagcagatagat 133  Q
    | ||||||||||||| |||||||||||    
T  39196674 tctcatcagttgttccagcagatagat 39196700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 7 - 215
Target Start/End: Complemental strand, 39216772 - 39216567
Alignment:
Q  7 ccaaagaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagat 106  Q
    ||||||||||||  ||||||||  ||||||||| |||||| ||| | ||||||||||| ||||| ||||||||||||| |||||||  |   ||||||||    
T  39216772 ccaaagaatttttagtattttcactcatgttagatttcaaatcaaatgctagcttcaatgcttcttctcttacacaaggtttaatatga---ggtgagat 39216676  T
Q  107 tatcatcagttgttctagcagatagatccagccttcatcaataatcacagctttgtctcctttcctaggcagtggaatcgtagggtttagtattatatcc 206  Q
    | |||||||||||||||||  ||| ||   |   ||| ||||||||||||| |||||||| ||| ||  || | |||| ||||||||  |||| ||||||    
T  39216675 tttcatcagttgttctagcgaataaatatggtaatcagcaataatcacagcattgtctcccttcttacacaattgaatagtagggttctgtatcatatcc 39216576  T
Q  207 aaaacaagt 215  Q
    |||||||||    
T  39216575 aaaacaagt 39216567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 39387561 - 39387677
Alignment:
Q  7 ccaaagaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagat 106  Q
    ||||||||||||| ||||||||||||||||||||||| || |||| |||||||||||| ||||| | | ||||||||| ||    ||| ||||||||| |    
T  39387561 ccaaagaattttcagtattttctttcatgttagcttttaaatcacgcgctagcttcaatgcttctttttttacacaagttt---caatttttggtgaggt 39387657  T
Q  107 tatcatcagttgttctagca 126  Q
    | ||||||||||||||||||    
T  39387658 tctcatcagttgttctagca 39387677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 215
Target Start/End: Original strand, 39396719 - 39396924
Alignment:
Q  7 ccaaagaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagat 106  Q
    ||||||||||||| ||||||||| | |||| |||| |||| |||   ||||||||||  ||||| ||||||||||||| |    ||||| ||||||||||    
T  39396719 ccaaagaattttcagtattttctctaatgtaagctctcaaatcatgtgctagcttcagtgcttcttctcttacacaaggt---ctaatagttggtgagat 39396815  T
Q  107 tatcatcagttgttctagcagatagatccagccttcatcaataatcacagctttgtctcctttcctaggcagtggaatcgtagggtttagtattatatcc 206  Q
    | ||||||||| ||||||||  |||||   ||  || ||||||| |||| | |||||||| ||| ||  |||||||||  | |||||| |||||||||||    
T  39396816 tctcatcagttcttctagcacgtagatgtggctatcctcaataaccacaccattgtctcccttcttacacagtggaataatggggttttgtattatatcc 39396915  T
Q  207 aaaacaagt 215  Q
    |||||||||    
T  39396916 aaaacaagt 39396924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 29 - 220
Target Start/End: Complemental strand, 39138739 - 39138551
Alignment:
Q  29 tttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagattatcatcagttgttctagcaga 128  Q
    |||||||||||||||||  | |   ||||||||||| ||||| |||||||||  || ||||||    || ||||||||| ||||||||||||||||||||    
T  39138739 tttcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcaggtttaatc---ttcggtgagattctcatcagttgttctagcaga 39138643  T
Q  129 tagatccagccttcatcaataatcacagctttgtctcctttcctaggcagtggaatcgtagggtttagtattatatccaaaacaagttttgc 220  Q
     |||| ||||| ||||||||||||||||| |  ||||| ||| ||  | |||||||  | || ||  |||||||||||||||||| ||||||    
T  39138642 aagatgcagccatcatcaataatcacagcatgttctccattcttacaccgtggaataattggcttctgtattatatccaaaacaacttttgc 39138551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 39205813 - 39205929
Alignment:
Q  11 agaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagattatc 110  Q
    ||||||||| |||||||||||||| ||||||||||| ||| | ||||||||||| ||||  ||||| ||||||| || |||||    |||||||||| ||    
T  39205813 agaattttcagtattttctttcatcttagctttcaagtcaaatgctagcttcaatgctttttctctcacacaaggttcaataa---ctggtgagattctc 39205909  T
Q  111 atcagttgttctagcagata 130  Q
    ||||||||||| ||||||||    
T  39205910 atcagttgttcaagcagata 39205929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 39421257 - 39421373
Alignment:
Q  14 attttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagattatcatc 113  Q
    |||||| |||||||||| ||| ||||||||||| |||   || |||||||| ||||| ||| ||||||||| ||   |||||| |||||||||| |||||    
T  39421257 attttcagtattttcttccatattagctttcaaatcaagagcgagcttcaatgcttcttcttttacacaagttt---taatatgtggtgagattttcatc 39421353  T
Q  114 agttgttctagcagatagat 133  Q
    ||||||||||||||| ||||    
T  39421354 agttgttctagcagaaagat 39421373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 39371217 - 39371115
Alignment:
Q  22 tattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagattatcatcagttgttc 121  Q
    |||||||||||||||| |||||||  |||   ||||||||||| |||||||||||||||||||  |    |||||||||||||||| |||| ||||||||    
T  39371217 tattttctttcatgttggctttcatatcaagtgctagcttcaatgcttcatctcttacacaaggct---caatatttggtgagattttcataagttgttc 39371121  T
Q  122 tagcag 127  Q
    ||||||    
T  39371120 tagcag 39371115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 220
Target Start/End: Original strand, 44895174 - 44895384
Alignment:
Q  7 ccaaagaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagat 106  Q
    ||||||||||||| |||||| |||| ||||||||||| || | |   ||||||||||| ||||  |||||||||| || ||||||||   ||||||| ||    
T  44895174 ccaaagaattttcagtatttccttttatgttagctttgaatttatgtgctagcttcaatgcttgttctcttacacgaggtttaataa---ttggtgacat 44895270  T
Q  107 tatcatcagttgttctagcagatagatccagccttcatcaataatcacagctttgtctcctttcctaggcagtggaatcgtagggtttagtattatatcc 206  Q
    |  |||||||  ||||||||||||||| |  |  |||||||||| || | | |||||  | ||| ||  |||||| ||  |||||||  |||||||||||    
T  44895271 tcccatcagtgtttctagcagatagatgcgccaatcatcaataaccaaatcattgtcatccttcttactcagtggcatactagggttctgtattatatcc 44895370  T
Q  207 aaaacaagttttgc 220  Q
    ||||||||||||||    
T  44895371 aaaacaagttttgc 44895384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 44749779 - 44749731
Alignment:
Q  137 gccttcatcaataatcacagctttgtctcctttcctaggcagtggaatc 185  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  44749779 gccttcatcaataatcacagctttgtcacccttcttaggcagtggaatc 44749731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 39413096 - 39413159
Alignment:
Q  7 ccaaagaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttc 70  Q
    ||||||| ||||||||||||||||||| |||||||||||| |||   ||||||||||| |||||    
T  39413096 ccaaagagttttcggtattttctttcaagttagctttcaaatcaagtgctagcttcaatgcttc 39413159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 39472831 - 39472870
Alignment:
Q  7 ccaaagaattttcggtattttctttcatgttagctttcaa 46  Q
    ||||||||||||| |||||||||||||||||| |||||||    
T  39472831 ccaaagaattttcagtattttctttcatgttaactttcaa 39472870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 39380643 - 39380717
Alignment:
Q  92 aatatttggtgagattatcatcagttgttctagcagatagatccagccttcatcaataatcacagctttgtctcc 166  Q
    |||||| ||||||| | |||||||||||||||||||| |||| | ||  |||| || ||||||||| ||||||||    
T  39380643 aatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaatcacagcattgtctcc 39380717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 39099652 - 39099584
Alignment:
Q  57 agcttcaacgcttcatctcttacacaagatttaataatatttggtgagattatcatcagttgttctagcaga 128  Q
    ||||||| |||||| ||||||||||||| ||| |||   | |||||||||| ||||||||||||| ||||||    
T  39099652 agcttcatcgcttcttctcttacacaaggtttgata---tgtggtgagattctcatcagttgttcgagcaga 39099584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 39223826 - 39223715
Alignment:
Q  7 ccaaagaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagat 106  Q
    ||||||| ||||| ||||| |||||||||||  |||| || ||| | ||||||||||| ||||  |||||  |||||| ||    ||||| |||||||||    
T  39223826 ccaaagatttttcagtattgtctttcatgttttcttttaaatcatatgctagcttcaatgctttttctctctcacaaggtt---caatatctggtgagat 39223730  T
Q  107 tatcatcagttgttc 121  Q
    | |||||||||||||    
T  39223729 tctcatcagttgttc 39223715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 219
Target Start/End: Complemental strand, 17060764 - 17060552
Alignment:
Q  4 cctccaaagaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtga 103  Q
    ||||||| |||| ||| |||||| |||| ||||||||||||||||||   ||||||||||| ||||| ||| |||||||||||||||||   ||||||||    
T  17060764 cctccaatgaatattcagtatttgcttttatgttagctttcaactcatgtgctagcttcaaagcttcgtcttttacacaagatttaata---tttggtga 17060668  T
Q  104 gattatcatcagttgttctagcagatagatccagccttcatcaataatcacagctttgtctcctttcctaggcagtggaatcgtagggtttagtattata 203  Q
     |||||||||||||||||||||| | |||| | || |||||||||||||||| |||||||||| ||| |||| ||||||||  | ||||| | ||||| |    
T  17060667 cattatcatcagttgttctagcataaagatgcggctttcatcaataatcacaactttgtctcccttcttaggtagtggaataatggggttcattattaca 17060568  T
Q  204 tccaaaacaagttttg 219  Q
    |||||||||| |||||    
T  17060567 tccaaaacaatttttg 17060552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 33562390 - 33562281
Alignment:
Q  21 gtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagattatcatcagttgtt 120  Q
    |||||||||||||||||||||||||| ||| | ||||||||||| ||||| | ||| ||||||| ||    ||||| |||||||||| ||||||||||||    
T  33562390 gtattttctttcatgttagctttcaaatcaaatgctagcttcaatgcttcttttctcacacaaggtt---caatatctggtgagattctcatcagttgtt 33562294  T
Q  121 ctagcagatagat 133  Q
    | || ||||||||    
T  33562293 ccagaagatagat 33562281  T

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Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 16114477 - 16114277
Alignment:
Q  12 gaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagattatca 111  Q
    |||||||  ||||| ||| |||||| ||||||||| || | |||||||||||| ||||  |||||||||| || ||||||| |   |||||| ||| |||    
T  16114477 gaatttttagtattctctctcatgtaagctttcaaatcgcgcgctagcttcaatgctttttctcttacacgaggtttaatagt---tggtgatattctca 16114381  T
Q  112 tcagttgttctagcagatagatccagccttcatcaataatcacagctttgtctcctttcctaggcagtggaatcgtagggtttagtattatatccaaaac 211  Q
    |||||| ||||| |||||||||   || |||||||||||||||||| |||||||| ||| ||  ||||||| |    |||||  ||||||||||||||||    
T  16114380 tcagttcttctaacagatagatgtggcattcatcaataatcacagcattgtctcccttcttacacagtggagtaccggggttctgtattatatccaaaac 16114281  T
Q  212 aagt 215  Q
    ||||    
T  16114280 aagt 16114277  T

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Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 44730233 - 44730154
Alignment:
Q  4 cctccaaagaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaa 83  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||||   ||||||||||| ||||||||||||||||||    
T  44730233 cctcctaagaattttcagtattttcttttatgttagctttcaactcatgtgctagcttcaaagcttcatctcttacacaa 44730154  T

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Target: chr8; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 45343072 - 45342957
Alignment:
Q  15 ttttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagattatcatca 114  Q
    ||||| |||||| |||||| ||||||||||||||||   |||||||| || ||||| ||||||||||||| ||||||| |   |||  ||||| ||||||    
T  45343072 ttttcagtatttcctttcacgttagctttcaactcaagtgctagcttgaatgcttcttctcttacacaaggtttaatact---tggcaagattctcatca 45342976  T
Q  115 gttgttctagcagatagat 133  Q
    |||||||||| ||||||||    
T  45342975 gttgttctaggagatagat 45342957  T

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Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 44950036 - 44950106
Alignment:
Q  113 cagttgttctagcagatagatccagccttcatcaataatcacagctttgtctcctttcctaggcagtggaa 183  Q
    |||||||||||| |||||||  | || ||||||||||||||||||||||||||| ||| |||||| |||||    
T  44950036 cagttgttctagaagatagacgcggctttcatcaataatcacagctttgtctcccttcttaggcaatggaa 44950106  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 44949959 - 44950037
Alignment:
Q  4 cctccaaagaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacaca 82  Q
    |||||||||||||||  ||||||||||| || |||  ||||||||||   ||||||||||| ||||||||||| |||||    
T  44949959 cctccaaagaatttttagtattttcttttattttaaatttcaactcatgtgctagcttcaaagcttcatctctaacaca 44950037  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 19808996 - 19808900
Alignment:
Q  29 tttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagattatcatcagttgttctagcaga 128  Q
    |||||||||||||||||| |||   ||||||||||| | ||| |||||||||| || ||   |||| || ||||||||| ||||||||||||||||||||    
T  19808996 tttcatgttagctttcaaatcaagtgctagcttcaatgtttcttctcttacaccaggtt---taatcttcggtgagattctcatcagttgttctagcaga 19808900  T

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Target: scaffold0283 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 5939 - 6017
Alignment:
Q  4 cctccaaagaattttcggtattttctttcatgttagctttcaactcacacgctagcttcaacgcttcatctcttacaca 82  Q
    |||||||||||||||  ||||||||||| || |||  ||||||||||   ||||||||||| ||||||||||| |||||    
T  5939 cctccaaagaatttttagtattttcttttattttaaatttcaactcatgtgctagcttcaaagcttcatctctaacaca 6017  T

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