View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0935_high_1 (Length: 384)

Name: NF0935_high_1
Description: NF0935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0935_high_1
NF0935_high_1
[»] chr8 (43 HSPs)
chr8 (145-336)||(23625285-23625479)
chr8 (1-51)||(3875999-3876049)
chr8 (1-51)||(28496355-28496405)
chr8 (1-50)||(24193131-24193180)
chr8 (1-51)||(513398-513448)
chr8 (1-51)||(9056338-9056388)
chr8 (1-51)||(15847203-15847253)
chr8 (1-51)||(23972295-23972345)
chr8 (1-51)||(35884430-35884480)
chr8 (1-51)||(38208844-38208894)
chr8 (1-51)||(41536527-41536577)
chr8 (1-51)||(260068-260118)
chr8 (1-51)||(440931-440981)
chr8 (1-51)||(655803-655853)
chr8 (1-51)||(841538-841588)
chr8 (1-51)||(1293577-1293627)
chr8 (1-51)||(2533363-2533413)
chr8 (5-51)||(24430571-24430617)
chr8 (1-51)||(35443402-35443452)
chr8 (1-51)||(36400070-36400120)
chr8 (1-51)||(38107190-38107240)
chr8 (1-51)||(42988227-42988276)
chr8 (1-51)||(43806533-43806583)
chr8 (1-51)||(13797179-13797229)
chr8 (1-51)||(28707446-28707496)
chr8 (1-51)||(36218781-36218831)
chr8 (1-51)||(37933733-37933783)
chr8 (1-51)||(38633710-38633760)
chr8 (1-51)||(40301893-40301943)
chr8 (2-46)||(39513344-39513388)
chr8 (5-51)||(4649245-4649291)
chr8 (117-147)||(9884671-9884701)
chr8 (5-51)||(22683988-22684034)
chr8 (5-51)||(33651936-33651982)
chr8 (117-146)||(24430476-24430505)
chr8 (117-146)||(33652048-33652077)
chr8 (117-146)||(41536432-41536461)
chr8 (117-145)||(5720427-5720455)
chr8 (117-145)||(8137338-8137366)
chr8 (117-145)||(15846955-15846983)
chr8 (117-145)||(24430868-24430896)
chr8 (117-145)||(35443518-35443546)
chr8 (117-145)||(43468909-43468937)
[»] chr7 (48 HSPs)
chr7 (1-51)||(47272072-47272122)
chr7 (1-51)||(48628896-48628946)
chr7 (1-51)||(1469493-1469543)
chr7 (1-51)||(11476556-11476606)
chr7 (1-51)||(23842396-23842446)
chr7 (1-51)||(31684134-31684184)
chr7 (1-51)||(42888940-42888990)
chr7 (1-51)||(42979338-42979388)
chr7 (1-51)||(47281124-47281174)
chr7 (1-50)||(44544500-44544549)
chr7 (1-50)||(47219236-47219285)
chr7 (5-51)||(221370-221416)
chr7 (5-51)||(2960640-2960686)
chr7 (1-51)||(8162712-8162762)
chr7 (1-51)||(11050261-11050311)
chr7 (1-51)||(30798368-30798418)
chr7 (1-51)||(30876350-30876400)
chr7 (1-51)||(35600122-35600172)
chr7 (1-51)||(37393998-37394048)
chr7 (1-51)||(38427563-38427613)
chr7 (1-51)||(40851365-40851415)
chr7 (1-51)||(41113468-41113518)
chr7 (1-51)||(43752776-43752826)
chr7 (1-51)||(43968259-43968309)
chr7 (1-51)||(47294291-47294341)
chr7 (1-50)||(33884410-33884459)
chr7 (2-51)||(47120083-47120134)
chr7 (1-51)||(27364339-27364389)
chr7 (117-151)||(31684034-31684068)
chr7 (5-51)||(44800410-44800456)
chr7 (1-51)||(41139408-41139462)
chr7 (117-147)||(11476852-11476882)
chr7 (5-51)||(18353239-18353285)
chr7 (117-147)||(27772980-27773010)
chr7 (1-51)||(30971941-30971991)
chr7 (117-155)||(31684401-31684439)
chr7 (117-151)||(39033872-39033906)
chr7 (117-146)||(2960545-2960574)
chr7 (1-46)||(4923307-4923352)
chr7 (5-50)||(29248437-29248482)
chr7 (117-146)||(45723396-45723425)
chr7 (117-146)||(47119836-47119865)
chr7 (117-146)||(47294196-47294225)
chr7 (117-145)||(11476462-11476490)
chr7 (117-145)||(43968555-43968583)
chr7 (117-145)||(47218962-47218990)
chr7 (117-145)||(47281422-47281450)
chr7 (117-145)||(48629012-48629040)
[»] chr6 (29 HSPs)
chr6 (1-51)||(2390356-2390406)
chr6 (1-51)||(17428272-17428322)
chr6 (1-51)||(2707550-2707600)
chr6 (1-51)||(3408280-3408330)
chr6 (1-51)||(10256328-10256378)
chr6 (1-51)||(12612971-12613021)
chr6 (1-51)||(12626727-12626777)
chr6 (1-51)||(29050363-29050413)
chr6 (1-51)||(30379108-30379158)
chr6 (1-50)||(6503809-6503858)
chr6 (1-51)||(1915343-1915393)
chr6 (1-51)||(8178249-8178299)
chr6 (1-51)||(9382610-9382660)
chr6 (1-51)||(31376008-31376058)
chr6 (2-51)||(2598099-2598148)
chr6 (1-51)||(11133965-11134015)
chr6 (1-51)||(16193401-16193451)
chr6 (1-51)||(17943127-17943177)
chr6 (1-50)||(25820550-25820599)
chr6 (347-378)||(2295276-2295307)
chr6 (1-51)||(3258807-3258858)
chr6 (1-51)||(26196321-26196372)
chr6 (1-51)||(1077328-1077378)
chr6 (9-51)||(26230932-26230974)
chr6 (1-51)||(26393009-26393059)
chr6 (10-51)||(6785101-6785142)
chr6 (117-146)||(12626843-12626872)
chr6 (117-146)||(26393305-26393334)
chr6 (117-145)||(2598006-2598034)
[»] chr5 (53 HSPs)
chr5 (1-51)||(3352002-3352052)
chr5 (1-51)||(6739955-6740005)
chr5 (1-51)||(4015874-4015924)
chr5 (1-51)||(6252063-6252113)
chr5 (1-51)||(6600136-6600186)
chr5 (1-51)||(8215991-8216041)
chr5 (1-51)||(11000728-11000778)
chr5 (5-51)||(11935540-11935586)
chr5 (1-51)||(14717696-14717746)
chr5 (1-51)||(16095960-16096010)
chr5 (1-51)||(20079258-20079308)
chr5 (1-51)||(20408624-20408674)
chr5 (1-51)||(27457197-27457247)
chr5 (1-51)||(30297749-30297799)
chr5 (1-51)||(39824647-39824697)
chr5 (1-51)||(40075041-40075091)
chr5 (1-51)||(1052624-1052674)
chr5 (1-51)||(14952415-14952465)
chr5 (1-51)||(26593280-26593330)
chr5 (1-51)||(28078405-28078455)
chr5 (1-51)||(30208402-30208452)
chr5 (1-51)||(31710373-31710423)
chr5 (1-51)||(33760470-33760520)
chr5 (1-51)||(38964114-38964164)
chr5 (2-51)||(19659501-19659550)
chr5 (1-50)||(41282433-41282482)
chr5 (2-51)||(43166269-43166318)
chr5 (5-51)||(8689667-8689713)
chr5 (1-51)||(11692147-11692197)
chr5 (1-51)||(27116099-27116149)
chr5 (1-51)||(39002025-39002075)
chr5 (1-51)||(42993609-42993659)
chr5 (1-50)||(30863344-30863393)
chr5 (7-51)||(6332873-6332917)
chr5 (117-148)||(11001024-11001055)
chr5 (117-148)||(26593576-26593607)
chr5 (1-51)||(27510062-27510112)
chr5 (5-51)||(19398193-19398239)
chr5 (1-51)||(23128913-23128963)
chr5 (1-51)||(35342271-35342321)
chr5 (117-146)||(6252179-6252208)
chr5 (117-146)||(19659406-19659435)
chr5 (117-146)||(33003248-33003277)
chr5 (117-145)||(4016169-4016197)
chr5 (117-145)||(6600432-6600460)
chr5 (117-145)||(8215717-8215745)
chr5 (117-145)||(11935294-11935322)
chr5 (117-145)||(14717421-14717449)
chr5 (117-145)||(17002452-17002480)
chr5 (117-145)||(20408740-20408768)
chr5 (117-145)||(26035272-26035300)
chr5 (117-145)||(35861501-35861529)
chr5 (117-145)||(38964020-38964048)
[»] chr4 (70 HSPs)
chr4 (1-51)||(4544985-4545035)
chr4 (1-51)||(23135006-23135056)
chr4 (1-51)||(5227481-5227531)
chr4 (1-51)||(24458631-24458681)
chr4 (1-51)||(26017514-26017564)
chr4 (1-51)||(28264734-28264784)
chr4 (1-51)||(28812287-28812337)
chr4 (1-51)||(31208835-31208885)
chr4 (1-51)||(31591166-31591216)
chr4 (1-51)||(32318044-32318094)
chr4 (1-51)||(33807780-33807830)
chr4 (1-51)||(39995167-39995217)
chr4 (1-51)||(42273893-42273943)
chr4 (1-51)||(44490410-44490460)
chr4 (1-51)||(48149590-48149640)
chr4 (1-51)||(49118702-49118752)
chr4 (1-51)||(50276138-50276188)
chr4 (2-51)||(25734223-25734272)
chr4 (1-51)||(2055369-2055419)
chr4 (1-51)||(9339123-9339173)
chr4 (1-51)||(12196560-12196610)
chr4 (1-51)||(14564887-14564937)
chr4 (1-51)||(15985101-15985151)
chr4 (1-51)||(17847096-17847146)
chr4 (1-51)||(17993017-17993067)
chr4 (1-51)||(19496102-19496152)
chr4 (1-51)||(20534256-20534306)
chr4 (1-51)||(30141108-30141158)
chr4 (1-51)||(31973682-31973732)
chr4 (1-51)||(33693333-33693383)
chr4 (1-51)||(35930130-35930180)
chr4 (1-51)||(48707733-48707783)
chr4 (1-51)||(51371047-51371097)
chr4 (1-51)||(55517185-55517235)
chr4 (1-50)||(32118805-32118854)
chr4 (1-50)||(40988724-40988773)
chr4 (1-49)||(10588671-10588719)
chr4 (1-51)||(8882013-8882063)
chr4 (5-51)||(25730335-25730381)
chr4 (1-51)||(30467003-30467053)
chr4 (2-51)||(28159953-28160002)
chr4 (1-50)||(33174021-33174070)
chr4 (1-50)||(37381937-37381986)
chr4 (2-51)||(48551764-48551813)
chr4 (117-148)||(51371372-51371403)
chr4 (20-51)||(56555165-56555196)
chr4 (117-148)||(56555440-56555471)
chr4 (5-51)||(11795154-11795200)
chr4 (5-51)||(22298613-22298659)
chr4 (117-147)||(28264487-28264517)
chr4 (117-147)||(33173924-33173954)
chr4 (5-51)||(39700140-39700186)
chr4 (1-51)||(50542354-50542404)
chr4 (117-146)||(17847002-17847031)
chr4 (117-154)||(33808077-33808114)
chr4 (117-146)||(36444587-36444616)
chr4 (117-145)||(2055102-2055130)
chr4 (117-145)||(5227597-5227625)
chr4 (117-145)||(17847420-17847448)
chr4 (117-145)||(19169062-19169090)
chr4 (117-145)||(19496442-19496470)
chr4 (117-145)||(22298336-22298364)
chr4 (117-149)||(23553271-23553303)
chr4 (117-145)||(26017269-26017297)
chr4 (117-145)||(28160251-28160279)
chr4 (117-145)||(28264850-28264878)
chr4 (117-145)||(30141373-30141401)
chr4 (117-153)||(33807679-33807715)
chr4 (117-145)||(42273648-42273676)
chr4 (117-145)||(50276431-50276459)
[»] chr3 (57 HSPs)
chr3 (1-51)||(33151787-33151837)
chr3 (1-51)||(37248047-37248097)
chr3 (1-51)||(1017135-1017185)
chr3 (1-51)||(1687742-1687792)
chr3 (1-51)||(3697237-3697287)
chr3 (1-51)||(21564587-21564637)
chr3 (1-51)||(42016964-42017014)
chr3 (1-51)||(42107099-42107149)
chr3 (1-51)||(50287657-50287707)
chr3 (2-51)||(44798359-44798408)
chr3 (1-51)||(10618480-10618530)
chr3 (1-51)||(20760071-20760121)
chr3 (1-51)||(21656609-21656659)
chr3 (1-51)||(21890261-21890311)
chr3 (1-51)||(27070739-27070789)
chr3 (1-51)||(31122753-31122803)
chr3 (1-51)||(35346471-35346521)
chr3 (1-51)||(36314972-36315022)
chr3 (1-51)||(38446567-38446617)
chr3 (1-51)||(38923998-38924048)
chr3 (1-51)||(48651339-48651389)
chr3 (1-51)||(52821049-52821099)
chr3 (1-46)||(19664632-19664677)
chr3 (1-43)||(12748482-12748524)
chr3 (1-51)||(20086314-20086364)
chr3 (1-51)||(20913754-20913804)
chr3 (1-51)||(20921872-20921922)
chr3 (1-51)||(26455673-26455723)
chr3 (5-51)||(33473239-33473285)
chr3 (1-51)||(40922165-40922215)
chr3 (5-51)||(51562257-51562303)
chr3 (1-51)||(53925979-53926029)
chr3 (6-51)||(53196110-53196155)
chr3 (1-45)||(22852087-22852131)
chr3 (117-148)||(1448638-1448669)
chr3 (117-147)||(1016888-1016918)
chr3 (1-51)||(20813441-20813491)
chr3 (1-51)||(32650820-32650870)
chr3 (5-51)||(35608131-35608177)
chr3 (5-51)||(41250981-41251027)
chr3 (9-51)||(44152772-44152814)
chr3 (1-51)||(47329175-47329225)
chr3 (117-147)||(49799015-49799045)
chr3 (117-146)||(8097228-8097257)
chr3 (118-147)||(20086218-20086247)
chr3 (1-50)||(29677567-29677616)
chr3 (117-146)||(36315268-36315297)
chr3 (117-146)||(38446293-38446322)
chr3 (117-146)||(44152516-44152545)
chr3 (117-146)||(44152880-44152909)
chr3 (117-145)||(1687858-1687886)
chr3 (117-145)||(19664358-19664386)
chr3 (117-145)||(20760367-20760395)
chr3 (117-145)||(21564342-21564370)
chr3 (117-145)||(21656725-21656753)
chr3 (117-145)||(33151932-33151960)
chr3 (117-145)||(50287383-50287411)
[»] chr2 (51 HSPs)
chr2 (1-51)||(12759750-12759800)
chr2 (1-51)||(2057017-2057067)
chr2 (1-51)||(2094410-2094460)
chr2 (1-51)||(9276665-9276715)
chr2 (1-51)||(9331847-9331897)
chr2 (1-51)||(14630705-14630755)
chr2 (1-51)||(16246193-16246243)
chr2 (1-51)||(17484550-17484600)
chr2 (1-51)||(27328675-27328725)
chr2 (1-51)||(33865267-33865317)
chr2 (1-51)||(37838388-37838438)
chr2 (1-51)||(40854700-40854750)
chr2 (1-50)||(17134320-17134369)
chr2 (2-51)||(34253234-34253283)
chr2 (1-50)||(38751139-38751188)
chr2 (1-51)||(921113-921163)
chr2 (1-51)||(2456101-2456151)
chr2 (5-51)||(11949426-11949472)
chr2 (1-51)||(19180512-19180562)
chr2 (1-51)||(28650426-28650476)
chr2 (1-51)||(33106969-33107019)
chr2 (1-51)||(41500502-41500552)
chr2 (1-50)||(36444229-36444278)
chr2 (2-51)||(37732193-37732242)
chr2 (1-45)||(771981-772025)
chr2 (117-153)||(36211254-36211290)
chr2 (1-44)||(3430631-3430674)
chr2 (5-51)||(7297234-7297280)
chr2 (1-51)||(7379054-7379104)
chr2 (1-51)||(23671811-23671861)
chr2 (1-46)||(36211137-36211182)
chr2 (117-148)||(2094314-2094345)
chr2 (1-51)||(1106559-1106609)
chr2 (5-51)||(2314975-2315021)
chr2 (1-51)||(8899773-8899822)
chr2 (1-51)||(25087796-25087846)
chr2 (1-51)||(29737839-29737889)
chr2 (5-51)||(45124214-45124260)
chr2 (117-146)||(920838-920867)
chr2 (117-154)||(2094677-2094714)
chr2 (117-146)||(7297170-7297199)
chr2 (117-146)||(37732098-37732127)
chr2 (117-145)||(2057132-2057160)
chr2 (117-149)||(16246489-16246521)
chr2 (117-145)||(23671718-23671746)
chr2 (117-145)||(27328791-27328819)
chr2 (117-145)||(28650332-28650360)
chr2 (117-145)||(37654301-37654329)
chr2 (117-145)||(37838504-37838532)
chr2 (117-145)||(38750864-38750892)
chr2 (117-149)||(42630169-42630201)
[»] chr1 (62 HSPs)
chr1 (1-51)||(12143163-12143213)
chr1 (1-51)||(33325818-33325868)
chr1 (1-51)||(7553016-7553066)
chr1 (1-51)||(9878784-9878834)
chr1 (1-51)||(18892420-18892470)
chr1 (1-51)||(38473626-38473676)
chr1 (1-51)||(41106107-41106157)
chr1 (1-51)||(49094711-49094761)
chr1 (1-51)||(50690034-50690084)
chr1 (1-50)||(19274650-19274699)
chr1 (1-50)||(50533474-50533523)
chr1 (1-48)||(24204474-24204521)
chr1 (1-51)||(45670486-45670537)
chr1 (1-51)||(5400961-5401011)
chr1 (1-51)||(6711531-6711581)
chr1 (1-51)||(16705961-16706011)
chr1 (1-51)||(19315731-19315781)
chr1 (1-51)||(21929617-21929667)
chr1 (1-51)||(21965156-21965206)
chr1 (1-51)||(23228194-23228244)
chr1 (1-51)||(23767414-23767464)
chr1 (5-51)||(25988271-25988317)
chr1 (1-51)||(26549479-26549529)
chr1 (1-51)||(28425363-28425413)
chr1 (5-51)||(34971175-34971221)
chr1 (1-51)||(36781172-36781222)
chr1 (5-51)||(37216991-37217037)
chr1 (1-51)||(46051541-46051591)
chr1 (5-51)||(46095075-46095121)
chr1 (1-51)||(46825622-46825672)
chr1 (1-51)||(48669396-48669446)
chr1 (1-51)||(48802331-48802381)
chr1 (1-51)||(52349924-52349974)
chr1 (1-51)||(45350717-45350765)
chr1 (1-51)||(7608766-7608816)
chr1 (1-51)||(7651753-7651803)
chr1 (1-51)||(8141486-8141536)
chr1 (1-51)||(9962842-9962892)
chr1 (1-51)||(25800733-25800782)
chr1 (5-51)||(26069987-26070033)
chr1 (1-51)||(33674108-33674158)
chr1 (5-51)||(33714361-33714407)
chr1 (2-51)||(40721435-40721484)
chr1 (1-49)||(41982237-41982285)
chr1 (117-148)||(34971275-34971306)
chr1 (1-51)||(17983898-17983948)
chr1 (117-147)||(25800848-25800878)
chr1 (117-147)||(28425267-28425297)
chr1 (21-51)||(36157678-36157708)
chr1 (117-147)||(49594866-49594896)
chr1 (1-51)||(49814391-49814441)
chr1 (118-147)||(24036576-24036605)
chr1 (117-146)||(24204376-24204405)
chr1 (120-153)||(33673826-33673859)
chr1 (117-146)||(46051657-46051686)
chr1 (117-145)||(6711678-6711706)
chr1 (117-145)||(16508195-16508223)
chr1 (117-145)||(19274765-19274793)
chr1 (117-145)||(26549205-26549233)
chr1 (117-145)||(36157973-36158001)
chr1 (117-145)||(37217103-37217131)
chr1 (117-145)||(48802237-48802265)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-51)||(218977-219027)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-51)||(252438-252488)
[»] scaffold1986 (2 HSPs)
scaffold1986 (1-51)||(205-255)
scaffold1986 (117-146)||(293-322)
[»] scaffold0693 (1 HSPs)
scaffold0693 (5-51)||(5027-5073)
[»] scaffold1562 (1 HSPs)
scaffold1562 (1-51)||(630-680)
[»] scaffold1158 (1 HSPs)
scaffold1158 (1-51)||(1913-1963)
[»] scaffold0952 (1 HSPs)
scaffold0952 (1-51)||(3371-3421)
[»] scaffold0717 (1 HSPs)
scaffold0717 (1-51)||(1908-1958)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-51)||(48053-48103)
[»] scaffold0727 (1 HSPs)
scaffold0727 (117-149)||(5392-5424)
[»] scaffold0117 (1 HSPs)
scaffold0117 (117-145)||(14495-14523)


Alignment Details
Target: chr8 (Bit Score: 112; Significance: 2e-56; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 145 - 336
Target Start/End: Original strand, 23625285 - 23625479
Alignment:
Q  145 ttttaaaaattcaccgaagccagcacataaaatatcttcattcatgaattattgcaagatcat-----------atgcaaatgacggaatatctagatgg 233  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||           |||||||||| |||||||||||||||    
T  23625285 ttttaaaaattcaccgaagccagcacataaattatcttcattcatggattattgtaagatcatctagtaaagtaatgcaaatgatggaatatctagatgg 23625384  T
Q  234 ttagaatactgtagggtatctaaattttaaatcaaaaccaacaagctcattgttattttgttattatacgaaaatcaaatggtttcacattaacaatgtc 333  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||| |||||||||||||||    
T  23625385 ttagaatactatagggtatctaaattttaaatcaaaaccaacaagctca--------ttgttattatacgaaaatcaaatggttccacattaacaatgtc 23625476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3875999 - 3876049
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3875999 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgattc 3876049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28496405 - 28496355
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28496405 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgattc 28496355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 24193180 - 24193131
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24193180 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgatt 24193131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 513398 - 513448
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  513398 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 513448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9056388 - 9056338
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  9056388 gaagcaattaccaactatgttatctacaataggacttgtttgaaacaattc 9056338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15847203 - 15847253
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  15847203 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 15847253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23972345 - 23972295
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  23972345 gaagcaattaccaactatgttatctacaatatgacttgtttgaaacgattc 23972295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35884480 - 35884430
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  35884480 gaagcaattaccaactatgttatctacaataagacttgtttgaaacgattc 35884430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38208844 - 38208894
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  38208844 gaagcaattaccaactatgttatctacaatatgacttgtttgaaacgattc 38208894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41536577 - 41536527
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  41536577 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 41536527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 260068 - 260118
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  260068 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacgattc 260118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 440931 - 440981
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  440931 gaagcaattaccaactatgctatatacaataggacttgtttgaaacgattc 440981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 655853 - 655803
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  655853 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacgattc 655803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 841588 - 841538
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  841588 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacgattc 841538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1293577 - 1293627
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||| | |||||||||||||||||||    
T  1293577 gaagcaattaccaactatgttatctacaacatgacttgtttgaaacgattc 1293627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2533363 - 2533413
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  2533363 gaagcaattaccaactatgatatctacaatatgacttgtttgaaacgattc 2533413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 24430617 - 24430571
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||    
T  24430617 caattatcaactatactatctacaataggacttgtttgaaacgattc 24430571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35443402 - 35443452
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  35443402 gaagcaattaccaactatgctatctacaatagaacttgtttgaaacgattc 35443452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36400120 - 36400070
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  36400120 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacgattc 36400070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38107190 - 38107240
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  38107190 gaagcaattaccaactatgctatctacaataagacttgtttgaaacgattc 38107240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42988276 - 42988227
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  42988276 gaagcaattatcaactatattatctacaataggactt-tttgaaacgattc 42988227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43806583 - 43806533
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  43806583 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacgattc 43806533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13797179 - 13797229
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||| |||||||||| ||||||||||||||||    
T  13797179 gaagcaattaccaactatgctatatacaataggatttgtttgaaacgattc 13797229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28707496 - 28707446
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| |||  |||||||||||||| ||||||||||||||||    
T  28707496 gaagcaattaccaattatgatatctacaataggatttgtttgaaacgattc 28707446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36218831 - 36218781
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||||||||||||||||  | |||||||||||||||||||    
T  36218831 gaagcaattatcaactatattatctacatcatgacttgtttgaaacgattc 36218781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37933733 - 37933783
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||| ||| |||||||||||||||||||    
T  37933733 gaagcaattaccaactatgctatctacgataagacttgtttgaaacgattc 37933783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38633760 - 38633710
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||| ||| ||||||||||||||||||    
T  38633760 gaagcaattaccaactatgctatctacattagaacttgtttgaaacgattc 38633710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40301943 - 40301893
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| ||||| |||||||||||||    
T  40301943 gaagcaattaccaactatgctatctacaatatgacttttttgaaacgattc 40301893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 39513388 - 39513344
Alignment:
Q  2 aagcaattaccaactatattatctacaataggacttgtttgaaac 46  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||||    
T  39513388 aagcaattaccaactatgttatctacattaggacttatttgaaac 39513344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 4649245 - 4649291
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||  |||||||||| ||||||||||||||||||||    
T  4649245 caattaccaattatgctatctacaattggacttgtttgaaacgattc 4649291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 9884701 - 9884671
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttt 147  Q
    |||||||||||||||||||||||||||||||    
T  9884701 cttaaaggacctttagatgcatttgaccttt 9884671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 22684034 - 22683988
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  ||||||||||| ||||||||||||| |||||    
T  22684034 caattaccaactatgatatctacaatatgacttgtttgaaatgattc 22683988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 33651936 - 33651982
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||| ||||||  ||||||| |||||||||||||||||||||||    
T  33651936 caattacaaactatgctatctacgataggacttgtttgaaacgattc 33651982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 24430505 - 24430476
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  24430505 cttaaaggacctttagatgcatttgacctt 24430476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 33652048 - 33652077
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  33652048 cttaaaggacctttagatgcatttgacctt 33652077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 41536461 - 41536432
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  41536461 cttaaaggacctttagatgcatttgacctt 41536432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 5720455 - 5720427
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  5720455 cttaaaggacctttagatgcatttgacct 5720427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 8137338 - 8137366
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  8137338 cttaaaggacctttagatgcatttgacct 8137366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 15846983 - 15846955
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  15846983 cttaaaggacctttagatgcatttgacct 15846955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 24430868 - 24430896
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  24430868 cttaaaggacctttagatgcatttgacct 24430896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 35443518 - 35443546
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  35443518 cttaaaggacctttagatgcatttgacct 35443546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 43468937 - 43468909
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  43468937 cttaaaggacctttagatgcatttgacct 43468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 47272072 - 47272122
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  47272072 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgattc 47272122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 48628896 - 48628946
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  48628896 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgattc 48628946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1469543 - 1469493
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  1469543 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 1469493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11476606 - 11476556
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  11476606 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 11476556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23842396 - 23842446
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  23842396 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 23842446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31684184 - 31684134
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  31684184 gaagcaattaccaactattctatctacaataggacttgtttgaaacgattc 31684134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42888940 - 42888990
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  42888940 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 42888990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42979388 - 42979338
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  42979388 gaagcaattaccaactatgttatctacagtaggacttgtttgaaacgattc 42979338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47281174 - 47281124
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  47281174 gaagcaattaccaactatggtatctacaataggacttgtttgaaacgattc 47281124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44544500 - 44544549
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  44544500 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgatt 44544549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 47219236 - 47219285
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  47219236 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgatt 47219285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 221370 - 221416
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  221370 caattaccaactatgctatctacaataggacttgtttgaaacgattc 221416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 2960686 - 2960640
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  2960686 caattaccaactatgctatctacaataggacttgtttgaaacgattc 2960640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8162762 - 8162712
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  8162762 gaagcaattaccaactatgctatctacaataggacttgtttgaaacaattc 8162712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11050311 - 11050261
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  11050311 gaagcaattaccaaatatgctatctacaataggacttgtttgaaacgattc 11050261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30798418 - 30798368
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  30798418 gaagcaattaccaactatgctatctacaataggatttgtttgaaacgattc 30798368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30876350 - 30876400
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  30876350 gaagcaattaccaactatgctatctacaatagcacttgtttgaaacgattc 30876400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35600172 - 35600122
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  35600172 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacgattc 35600122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37394048 - 37393998
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  37394048 gaagcaactaccaactatgctatctacaataggacttgtttgaaacgattc 37393998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38427613 - 38427563
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  38427613 gaagcaattaccaactatgctatctataataggacttgtttgaaacgattc 38427563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40851365 - 40851415
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  || ||||||||||||||||||||||||||||    
T  40851365 gaagcaattaccaactattctacctacaataggacttgtttgaaacgattc 40851415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41113468 - 41113518
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  41113468 gaagcaattaccaactatgctatctacaataggacttgtttgaaatgattc 41113518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43752826 - 43752776
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  43752826 gaagcaattaccaattatgctatctacaataggacttgtttgaaacgattc 43752776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43968309 - 43968259
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||    
T  43968309 gaagcaattaccaactacgctatctacaataggacttgtttgaaacgattc 43968259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47294341 - 47294291
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  47294341 gaagcaattaccaacgatgctatctacaataggacttgtttgaaacgattc 47294291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33884410 - 33884459
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  33884410 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacgatt 33884459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 47120083 - 47120134
Alignment:
Q  2 aagcaattaccaactatat--tatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  47120083 aagcaattaccaactatatgctctctacaataggacttgtttgaaacgattc 47120134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27364389 - 27364339
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||| ||||||||||||| |||||||||||||||  |||||||||||||||    
T  27364389 gaagtaattaccaactatgttatctacaataggatctgtttgaaacgattc 27364339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 151
Target Start/End: Complemental strand, 31684068 - 31684034
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttttaaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  31684068 cttaaaggacctttagatgcatttgaccttttaaa 31684034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 44800456 - 44800410
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||||    
T  44800456 caattaccaactatgttatctacaacaggacttgtttgaaacaattc 44800410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41139462 - 41139408
Alignment:
Q  1 gaagcaattaccaactatat----tatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||||    ||| |||||||||||||||||||||||||||    
T  41139462 gaagcaattaccaactatatatgctatttacaataggacttgtttgaaacgattc 41139408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 11476852 - 11476882
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttt 147  Q
    |||||||||||||||||||||||||||||||    
T  11476852 cttaaaggacctttagatgcatttgaccttt 11476882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 18353239 - 18353285
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  |||||||  ||||||||||||||||||||||    
T  18353239 caattaccaactatgctatctaccttaggacttgtttgaaacgattc 18353285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 27773010 - 27772980
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttt 147  Q
    |||||||||||||||||||||||||||||||    
T  27773010 cttaaaggacctttagatgcatttgaccttt 27772980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30971991 - 30971941
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||| |||||||||||||   |||||||||| |||||||||||||||||||    
T  30971991 gaagtaattaccaactatgccatctacaatatgacttgtttgaaacgattc 30971941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 155
Target Start/End: Original strand, 31684401 - 31684439
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttttaaaaatt 155  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  31684401 cttaaaggacctttagatgcatttgacctatttaaaatt 31684439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 151
Target Start/End: Complemental strand, 39033906 - 39033872
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttttaaa 151  Q
    ||||||||||||||||||||||||||||| |||||    
T  39033906 cttaaaggacctttagatgcatttgacctattaaa 39033872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 2960574 - 2960545
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  2960574 cttaaaggacctttagatgcatttgacctt 2960545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4923307 - 4923352
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaac 46  Q
    |||| |||||||||||||  |||| |||||||||||||||||||||    
T  4923307 gaagtaattaccaactatgctatccacaataggacttgtttgaaac 4923352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 29248437 - 29248482
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||||||  ||||||||||| ||||||||||||| ||||    
T  29248437 caattaccaactatgctatctacaataagacttgtttgaaatgatt 29248482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 45723425 - 45723396
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  45723425 cttaaaggacctttagatgcatttgacctt 45723396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 47119865 - 47119836
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  47119865 cttaaaggacctttagatgcatttgacctt 47119836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 47294225 - 47294196
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  47294225 cttaaaggacctttagatgcatttgacctt 47294196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 11476490 - 11476462
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  11476490 cttaaaggacctttagatgcatttgacct 11476462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 43968555 - 43968583
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  43968555 cttaaaggacctttagatgcatttgacct 43968583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 47218990 - 47218962
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  47218990 cttaaaggacctttagatgcatttgacct 47218962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 47281422 - 47281450
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  47281422 cttaaaggacctttagatgcatttgacct 47281450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 48629012 - 48629040
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  48629012 cttaaaggacctttagatgcatttgacct 48629040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2390356 - 2390406
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2390356 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgattc 2390406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17428322 - 17428272
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17428322 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgattc 17428272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2707550 - 2707600
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  2707550 gaagcaattaccaactatgatatctacaataggacttgtttgaaacgattc 2707600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3408280 - 3408330
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  3408280 gaagcaattaccaactatactatctacaatatgacttgtttgaaacgattc 3408330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10256328 - 10256378
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  10256328 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 10256378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12613021 - 12612971
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  12613021 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 12612971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12626727 - 12626777
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  12626727 gaagcaattaccaactattctatctacaataggacttgtttgaaacgattc 12626777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29050363 - 29050413
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  29050363 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 29050413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30379108 - 30379158
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  30379108 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 30379158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6503809 - 6503858
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  6503809 gaagcaattaccaactatgatatctacaataggacttgtttgaaacgatt 6503858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1915393 - 1915343
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  1915393 gaagcaattaccaactatgctatctacaataggacttgtttgaaactattc 1915343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8178299 - 8178249
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  8178299 gaagcaattaccaactatgctatctacaataggacatgtttgaaacgattc 8178249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9382610 - 9382660
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||||||    
T  9382610 gaagcaattaccaactatgttatctacatcaggacttgtttgaaacgattc 9382660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31376008 - 31376058
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  31376008 gaagcaattaacaactatgctatctacaataggacttgtttgaaacgattc 31376058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 2598148 - 2598099
Alignment:
Q  2 aagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  2598148 aagcaattaccaactatgatatctacaatatgacttgtttgaaacgattc 2598099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11133965 - 11134015
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||| ||||  ||||||| |||||||||||||||||||||||    
T  11133965 gaagcaattaccatctatgctatctacgataggacttgtttgaaacgattc 11134015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16193401 - 16193451
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||| || ||| ||||||||||||||||||    
T  16193401 gaagcaattaccaactattttatctgcattagaacttgtttgaaacgattc 16193451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17943127 - 17943177
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| |||  |||||||| ||||||||||||||||||||||    
T  17943127 gaagcaattaccaattatgctatctacattaggacttgtttgaaacgattc 17943177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25820599 - 25820550
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||||||||||  ||||||| |||||| |||||||||||||||    
T  25820599 gaagcaattaccaactatgctatctacgataggaattgtttgaaacgatt 25820550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 378
Target Start/End: Original strand, 2295276 - 2295307
Alignment:
Q  347 taatcaagctttcattggttgggcaccgtacg 378  Q
    ||||||||||||||||||||||||||||||||    
T  2295276 taatcaagctttcattggttgggcaccgtacg 2295307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3258858 - 3258807
Alignment:
Q  1 gaagcaattaccaa-ctatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| ||||  |||||||||||| ||||||||||||||||||    
T  3258858 gaagcaattaccaaactatggtatctacaatagaacttgtttgaaacgattc 3258807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26196372 - 26196321
Alignment:
Q  1 gaagcaattaccaa-ctatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||| ||||||    
T  26196372 gaagcaattaccaaactatgttatctacaataggacttggttgaaccgattc 26196321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1077328 - 1077378
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||| | ||||| |||||||||||||    
T  1077328 gaagcaattaccaactatgctatctacaacatgacttatttgaaacgattc 1077378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 26230974 - 26230932
Alignment:
Q  9 taccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||| |||| ||||||||||||||||||||||    
T  26230974 taccaactatgttatttacattaggacttgtttgaaacgattc 26230932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26393059 - 26393009
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||| | || |||||||||||||    
T  26393059 gaagcaattaccaactatgctatctacaatagaagttttttgaaacgattc 26393009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 6785142 - 6785101
Alignment:
Q  10 accaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||    
T  6785142 accaattatgttatctacattaggacttgtttgaaacgattc 6785101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 12626843 - 12626872
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  12626843 cttaaaggacctttagatgcatttgacctt 12626872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 26393305 - 26393334
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  26393305 cttaaaggacctttagatgcatttgacctt 26393334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 2598034 - 2598006
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  2598034 cttaaaggacctttagatgcatttgacct 2598006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3352052 - 3352002
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3352052 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgattc 3352002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6740005 - 6739955
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6740005 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgattc 6739955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4015924 - 4015874
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  4015924 gaagcaattaccaactatgttatctacaataggacttgcttgaaacgattc 4015874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6252063 - 6252113
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  6252063 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 6252113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6600186 - 6600136
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  6600186 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 6600136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8215991 - 8216041
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  8215991 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 8216041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11000778 - 11000728
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  11000778 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 11000728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 11935540 - 11935586
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  11935540 caattaccaactatgttatctacaataggacttgtttgaaacgattc 11935586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14717696 - 14717746
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  14717696 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 14717746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16096010 - 16095960
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  16096010 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 16095960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20079308 - 20079258
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  20079308 gaagcaattaccaactatgttatctacattaggacttgtttgaaacgattc 20079258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20408624 - 20408674
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  20408624 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 20408674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27457247 - 27457197
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  27457247 gaagcaattaccaactatgttatctacaatatgacttgtttgaaacgattc 27457197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30297799 - 30297749
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  30297799 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 30297749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39824647 - 39824697
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  39824647 gaagcaattaccaactatgtcatctacaataggacttgtttgaaacgattc 39824697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40075041 - 40075091
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  40075041 gaagcaattaccaactatgttatctacaataggacttgtttgaaacaattc 40075091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1052624 - 1052674
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  1052624 gaagcaattaccaactatgctatctacaataggacttgtttgaaacaattc 1052674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14952415 - 14952465
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||| | |||||||||||||||||||    
T  14952415 gaagcaattaccaactatgttatctacaacaagacttgtttgaaacgattc 14952465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26593330 - 26593280
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  26593330 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacgattc 26593280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28078455 - 28078405
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  28078455 gaagcaattaccaactatgctatctacattaggacttgtttgaaacgattc 28078405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30208452 - 30208402
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||    
T  30208452 gaagcaattaccaactatgttatctacaatagaacttgtttgaaatgattc 30208402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31710373 - 31710423
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||| || |||||||||||||||||||    
T  31710373 gaagcaattaccaactatgttatctacattatgacttgtttgaaacgattc 31710423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33760520 - 33760470
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  33760520 gaagtaattaccaactatgctatctacaataggacttgtttgaaacgattc 33760470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38964164 - 38964114
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  38964164 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacgattc 38964114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 19659550 - 19659501
Alignment:
Q  2 aagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||  ||||||||||||||||| |||||||||||||    
T  19659550 aagcaattaccaactatgctatctacaataggacttatttgaaacgattc 19659501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41282433 - 41282482
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  41282433 gaagcaattaccaactatgctatctacaataggacttgtttgaaatgatt 41282482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 43166318 - 43166269
Alignment:
Q  2 aagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  43166318 aagcaattaccaactatgctatctacaataggacttgtttgaaacaattc 43166269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 8689667 - 8689713
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||    
T  8689667 caattaccaactatgttatctacattatgacttgtttgaaacgattc 8689713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11692197 - 11692147
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||| ||||| |||||||||||||||||||    
T  11692197 gaagcaattaccaactatgctatctgcaatatgacttgtttgaaacgattc 11692147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27116149 - 27116099
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||||||||||||| ||| |||||    
T  27116149 gaagcaattaccaactatgctatctacaataggacttgtttaaaatgattc 27116099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39002075 - 39002025
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||| ||||    
T  39002075 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacaattc 39002025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42993609 - 42993659
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||| ||||    
T  42993609 gaagcaattaccaactatgctatctacaataggaattgtttgaaacaattc 42993659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 30863344 - 30863393
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||||||||||  |||||||| || ||||||||||||||||||    
T  30863344 gaagcaattaccaactatgctatctacattatgacttgtttgaaacgatt 30863393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 6332873 - 6332917
Alignment:
Q  7 attaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||    
T  6332873 attaccaactattctatctacaatagaacttgtttgaaacgattc 6332917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 148
Target Start/End: Original strand, 11001024 - 11001055
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctttt 148  Q
    ||||||||||||||||||||||||||||||||    
T  11001024 cttaaaggacctttagatgcatttgacctttt 11001055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 148
Target Start/End: Original strand, 26593576 - 26593607
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctttt 148  Q
    ||||||||||||||||||||||||||||||||    
T  26593576 cttaaaggacctttagatgcatttgacctttt 26593607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27510062 - 27510112
Alignment:
Q  1 gaagcaattaccaactata-ttatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  27510062 gaagcaattaccaactatgcttat-tacaataggacttgtttgaaacgattc 27510112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 19398239 - 19398193
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  |||||||||||| |||||||||||| |||||    
T  19398239 caattaccaactatgctatctacaatagaacttgtttgaaatgattc 19398193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23128963 - 23128913
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| |||  ||||||| ||| |||||||||||||||||||    
T  23128963 gaagcaattaccaattatgctatctacgatatgacttgtttgaaacgattc 23128913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35342271 - 35342321
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||||||  ||||||||||  |||||||||||||||||||    
T  35342271 gaagcaattatcaactatgctatctacaatgagacttgtttgaaacgattc 35342321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 6252179 - 6252208
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  6252179 cttaaaggacctttagatgcatttgacctt 6252208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 19659435 - 19659406
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  19659435 cttaaaggacctttagatgcatttgacctt 19659406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 33003248 - 33003277
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  33003248 cttaaaggacctttagatgcatttgacctt 33003277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 4016169 - 4016197
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  4016169 cttaaaggacctttagatgcatttgacct 4016197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 6600432 - 6600460
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  6600432 cttaaaggacctttagatgcatttgacct 6600460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 8215745 - 8215717
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  8215745 cttaaaggacctttagatgcatttgacct 8215717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 11935322 - 11935294
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  11935322 cttaaaggacctttagatgcatttgacct 11935294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 14717449 - 14717421
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  14717449 cttaaaggacctttagatgcatttgacct 14717421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 17002452 - 17002480
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  17002452 cttaaaggacctttagatgcatttgacct 17002480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 20408740 - 20408768
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  20408740 cttaaaggacctttagatgcatttgacct 20408768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 26035300 - 26035272
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  26035300 cttaaaggacctttagatgcatttgacct 26035272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 35861501 - 35861529
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  35861501 cttaaaggacctttagatgcatttgacct 35861529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 38964048 - 38964020
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  38964048 cttaaaggacctttagatgcatttgacct 38964020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4545035 - 4544985
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4545035 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgattc 4544985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23135056 - 23135006
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23135056 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgattc 23135006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5227481 - 5227531
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  5227481 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 5227531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24458681 - 24458631
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  24458681 gaagcaattaccaactatgttatctacaataagacttgtttgaaacgattc 24458631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26017514 - 26017564
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  26017514 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 26017564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28264734 - 28264784
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  28264734 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 28264784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28812337 - 28812287
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  28812337 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 28812287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31208835 - 31208885
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  31208835 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 31208885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31591166 - 31591216
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  31591166 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 31591216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32318044 - 32318094
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  32318044 gaagcaattaccaactatgttatctacaataggacttgtttgaaatgattc 32318094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33807830 - 33807780
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  33807830 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 33807780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39995217 - 39995167
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  39995217 gaagcaattaccaactatgttatctacaatagaacttgtttgaaacgattc 39995167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42273893 - 42273943
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  42273893 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 42273943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44490410 - 44490460
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  44490410 gaagcaattaccaactatgatatctacaataggacttgtttgaaacgattc 44490460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 48149590 - 48149640
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  48149590 gaagcaattaccaactatgttatctacattaggacttgtttgaaacgattc 48149640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 49118702 - 49118752
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  49118702 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 49118752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 50276188 - 50276138
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  50276188 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 50276138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 25734272 - 25734223
Alignment:
Q  2 aagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  25734272 aagcaattaccaactatgttatctacaataggacttgtttgaaatgattc 25734223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2055369 - 2055419
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  2055369 gaagcaattatcaactatgttatctacaatatgacttgtttgaaacgattc 2055419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9339173 - 9339123
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  9339173 gaagcaattaccaactatgttatctacaatatgacttgtttgaaatgattc 9339123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12196560 - 12196610
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  12196560 gaagcaattaccaactatgctatctacaataggacttgtttgaaatgattc 12196610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14564887 - 14564937
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  14564887 gaagcaattaccaactatgctatatacaataggacttgtttgaaacgattc 14564937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15985101 - 15985151
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||||||||    
T  15985101 gaagcaattaccaactatgttatctagaatatgacttgtttgaaacgattc 15985151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17847146 - 17847096
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  17847146 gaagcaattaccaattatgctatctacaataggacttgtttgaaacgattc 17847096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17993067 - 17993017
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  17993067 gaagcaattaccaactatgctatttacaataggacttgtttgaaacgattc 17993017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19496152 - 19496102
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  19496152 gaagcaattaccaactatggtatctacaataggacttgtttgaaacaattc 19496102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20534256 - 20534306
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  20534256 gaagcaattaccaactatgctatcaacaataggacttgtttgaaacgattc 20534306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30141158 - 30141108
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  30141158 gaagcaattaccaactatgctatcaacaataggacttgtttgaaacgattc 30141108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31973682 - 31973732
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  31973682 gaagcaattaccaactatgctatctacaatagaacttgtttgaaacgattc 31973732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33693383 - 33693333
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  33693383 gaagcaattaccaactatgctatctacaacaggacttgtttgaaacgattc 33693333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35930130 - 35930180
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  35930130 gaagcaattaccaactatgctatctacaatagaacttgtttgaaacgattc 35930180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48707783 - 48707733
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  48707783 gaagcaattaccaactatgctatctacaataggacttgtttgaaaagattc 48707733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 51371097 - 51371047
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  51371097 gaagcaattaccaactatgctatctacaatagaacttgtttgaaacgattc 51371047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 55517235 - 55517185
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  55517235 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacgattc 55517185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 32118805 - 32118854
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  32118805 gaagcaattaccaactatgctatctacaatagaacttgtttgaaacgatt 32118854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40988724 - 40988773
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    |||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  40988724 gaagcaattatcaactatgctatctacaataggacttgtttgaaacgatt 40988773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10588671 - 10588719
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgat 49  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  10588671 gaagcaattaccaactatgctatctacaatacgacttgtttgaaacgat 10588719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8882063 - 8882013
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||||||  |||||| ||||||||||||||||||||||||    
T  8882063 gaagcaattatcaactatgctatctagaataggacttgtttgaaacgattc 8882013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 25730335 - 25730381
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  25730335 caattaccaactatgctatctacaatatgacttgtttgaaacgattc 25730381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30467053 - 30467003
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||| |||||||||||||  |||||||||||| ||||||||||||||||||    
T  30467053 gaagaaattaccaactatgctatctacaatagaacttgtttgaaacgattc 30467003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 28160002 - 28159953
Alignment:
Q  2 aagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||  ||||||||||| ||||||||||||| |||||    
T  28160002 aagcaattaccaactatggtatctacaataagacttgtttgaaatgattc 28159953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33174070 - 33174021
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||||||||||   |||||||||| ||||||||||||||||||    
T  33174070 gaagcaattaccaactatgaaatctacaataagacttgtttgaaacgatt 33174021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37381937 - 37381986
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||| ||||    
T  37381937 gaagcaattaccaactatgctatctacaatatgacttgtttgaaatgatt 37381986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 48551813 - 48551764
Alignment:
Q  2 aagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| ||  ||||||||||| |||||||||||||||||||    
T  48551813 aagcaattaccaaccatgctatctacaatatgacttgtttgaaacgattc 48551764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 148
Target Start/End: Original strand, 51371372 - 51371403
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctttt 148  Q
    ||||||||||||||||||||||||||||||||    
T  51371372 cttaaaggacctttagatgcatttgacctttt 51371403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 51
Target Start/End: Complemental strand, 56555196 - 56555165
Alignment:
Q  20 ttatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||||||||||||||||    
T  56555196 ttatctacaataggacttgtttgaaacgattc 56555165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 148
Target Start/End: Original strand, 56555440 - 56555471
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctttt 148  Q
    ||||||||||||||||||||||||||||||||    
T  56555440 cttaaaggacctttagatgcatttgacctttt 56555471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 11795200 - 11795154
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  |||||| |||| |||||||||||||||||||    
T  11795200 caattaccaactatgctatctagaatatgacttgtttgaaacgattc 11795154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 22298613 - 22298659
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||  ||||||||||||| |||||||||||||||||    
T  22298613 caattaccaattatgctatctacaatagggcttgtttgaaacgattc 22298659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 28264517 - 28264487
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttt 147  Q
    |||||||||||||||||||||||||||||||    
T  28264517 cttaaaggacctttagatgcatttgaccttt 28264487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 33173954 - 33173924
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttt 147  Q
    |||||||||||||||||||||||||||||||    
T  33173954 cttaaaggacctttagatgcatttgaccttt 33173924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 39700140 - 39700186
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| ||| ||||||| |||| |||||||||||||||||||    
T  39700140 caattaccaattatgttatctataataagacttgtttgaaacgattc 39700186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 50542404 - 50542354
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| || |||||| |||||||||    
T  50542404 gaagcaattaccaactatgctatctacaataagatttgtttaaaacgattc 50542354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 17847031 - 17847002
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  17847031 cttaaaggacctttagatgcatttgacctt 17847002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 33808077 - 33808114
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttttaaaaat 154  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  33808077 cttaaagaacctttagatgcatttgaccttttgaaaat 33808114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 36444616 - 36444587
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  36444616 cttaaaggacctttagatgcatttgacctt 36444587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 2055130 - 2055102
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  2055130 cttaaaggacctttagatgcatttgacct 2055102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 5227597 - 5227625
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  5227597 cttaaaggacctttagatgcatttgacct 5227625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 17847420 - 17847448
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  17847420 cttaaaggacctttagatgcatttgacct 17847448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 19169062 - 19169090
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  19169062 cttaaaggacctttagatgcatttgacct 19169090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 19496442 - 19496470
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  19496442 cttaaaggacctttagatgcatttgacct 19496470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 22298364 - 22298336
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  22298364 cttaaaggacctttagatgcatttgacct 22298336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 23553271 - 23553303
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctttta 149  Q
    |||||||||||||||||||||||||||| ||||    
T  23553271 cttaaaggacctttagatgcatttgaccattta 23553303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 26017297 - 26017269
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  26017297 cttaaaggacctttagatgcatttgacct 26017269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 28160251 - 28160279
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  28160251 cttaaaggacctttagatgcatttgacct 28160279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 28264850 - 28264878
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  28264850 cttaaaggacctttagatgcatttgacct 28264878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 30141373 - 30141401
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  30141373 cttaaaggacctttagatgcatttgacct 30141401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 33807715 - 33807679
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttttaaaaa 153  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  33807715 cttaaatgacctttagatgcatttgaccttttcaaaa 33807679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 42273676 - 42273648
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  42273676 cttaaaggacctttagatgcatttgacct 42273648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 50276431 - 50276459
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  50276431 cttaaaggacctttagatgcatttgacct 50276459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33151787 - 33151837
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33151787 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgattc 33151837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37248047 - 37248097
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37248047 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgattc 37248097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1017135 - 1017185
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  1017135 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 1017185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1687742 - 1687792
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  1687742 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 1687792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3697237 - 3697287
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  3697237 gaagcaattaccaactatactatctacaataggacttgtttgaaaggattc 3697287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21564587 - 21564637
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  21564587 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 21564637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42016964 - 42017014
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  42016964 gaagcaattaccaactatgttatctacaatatgacttgtttgaaacgattc 42017014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42107149 - 42107099
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  42107149 gaagtaattaccaactatactatctacaataggacttgtttgaaacgattc 42107099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50287657 - 50287707
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  50287657 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 50287707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 44798359 - 44798408
Alignment:
Q  2 aagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  44798359 aagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 44798408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10618530 - 10618480
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||||    
T  10618530 gaagcaattaccaattatgtcatctacaataggacttgtttgaaacgattc 10618480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20760121 - 20760071
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  20760121 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacgattc 20760071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21656609 - 21656659
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  21656609 gaagcaattaccaactatgctatatacaataggacttgtttgaaacgattc 21656659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21890261 - 21890311
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  21890261 gaagcaattaccaaatatgttatctataataggacttgtttgaaacgattc 21890311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27070789 - 27070739
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  27070789 gaagcaattaccaactatgctatctacaataagacttgtttgaaacgattc 27070739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31122753 - 31122803
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  31122753 gaagcaattaccaactatgctatctacaataagacttgtttgaaacgattc 31122803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35346521 - 35346471
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  35346521 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacgattc 35346471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36315022 - 36314972
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  36315022 gaagcaattaccaactatgctatctacaataggacttgtttgaaacaattc 36314972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38446567 - 38446617
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  38446567 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacgattc 38446617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38924048 - 38923998
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||||| ||||    
T  38924048 gaagcaattaccaactattttatctacgataggacttgtttgaaacaattc 38923998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 48651339 - 48651389
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  48651339 gaagcaattaccaactatgctatctacattaggacttgtttgaaacgattc 48651389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 52821099 - 52821049
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  52821099 gaagcaattaccaactatgttatctacaacaggacttgtttaaaacgattc 52821049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19664632 - 19664677
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaac 46  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||    
T  19664632 gaagcaattaccaactatgctatctacaataggacttgtttgaaac 19664677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12748482 - 12748524
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttga 43  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  12748482 gaagcaattaccaactatgctatctacaataggacttgtttga 12748524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20086364 - 20086314
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| |||  |||||| ||||||||||||||||||||||||    
T  20086364 gaagcaattaccaagtatgctatctataataggacttgtttgaaacgattc 20086314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20913804 - 20913754
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||||||  |||||||||||| ||||||||||||||||||    
T  20913804 gaagcaattatcaactatgctatctacaatagaacttgtttgaaacgattc 20913754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20921922 - 20921872
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||||||  |||||||||||| ||||||||||||||||||    
T  20921922 gaagcaattatcaactatgctatctacaatagaacttgtttgaaacgattc 20921872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26455673 - 26455723
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||| | |||||||||||||||||||    
T  26455673 gaagcaattaccaactatgctatctacaacatgacttgtttgaaacgattc 26455723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 33473285 - 33473239
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||    
T  33473285 caattaccaactatgttatctacaataaaacttgtttgaaacgattc 33473239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40922215 - 40922165
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||| |||||||||||||  ||||||||||| |||||||||||||||||||    
T  40922215 gaagtaattaccaactatgctatctacaatacgacttgtttgaaacgattc 40922165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 51562257 - 51562303
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  51562257 caattaccaactatgttatctacattagaacttgtttgaaacgattc 51562303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 53926029 - 53925979
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||||| |||||    
T  53926029 gaagcaattaccaactatactatctacaatatgacttatttgaaatgattc 53925979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 53196110 - 53196155
Alignment:
Q  6 aattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||| |||||||||||| ||||| |||||||||||||    
T  53196110 aattaccaactatgttatctacaataagacttctttgaaacgattc 53196155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22852087 - 22852131
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaa 45  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||    
T  22852087 gaagcaattaccaactatgctatctacaataggacttatttgaaa 22852131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 148
Target Start/End: Complemental strand, 1448669 - 1448638
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctttt 148  Q
    ||||||||||||||||||||||||||||||||    
T  1448669 cttaaaggacctttagatgcatttgacctttt 1448638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 1016918 - 1016888
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttt 147  Q
    |||||||||||||||||||||||||||||||    
T  1016918 cttaaaggacctttagatgcatttgaccttt 1016888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20813491 - 20813441
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| |||  |||||||| || |||||||||||||||||||    
T  20813491 gaagcaattaccaattatgctatctacattatgacttgtttgaaacgattc 20813441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32650870 - 32650820
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||| ||||| |||||||||||| |||||    
T  32650870 gaagcaattaccaactatgctatctataatagaacttgtttgaaatgattc 32650820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 35608177 - 35608131
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||  ||||||||||||||||| |||||||||||||    
T  35608177 caattaccaattatgctatctacaataggacttatttgaaacgattc 35608131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 41250981 - 41251027
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  ||||||||||| |||||||||||||| ||||    
T  41250981 caattaccaactatgctatctacaataagacttgtttgaaacaattc 41251027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 44152772 - 44152814
Alignment:
Q  9 taccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| ||||||| |||| |||||||||||||||||||    
T  44152772 taccaactatgttatctataatatgacttgtttgaaacgattc 44152814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47329225 - 47329175
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||| ||| |||||||| ||||||||||    
T  47329225 gaagcaattaccaactatgctatctacgatatgacttgttggaaacgattc 47329175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 49799045 - 49799015
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttt 147  Q
    |||||||||||||||||||||||||||||||    
T  49799045 cttaaaggacctttagatgcatttgaccttt 49799015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 8097228 - 8097257
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  8097228 cttaaaggacctttagatgcatttgacctt 8097257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 147
Target Start/End: Complemental strand, 20086247 - 20086218
Alignment:
Q  118 ttaaaggacctttagatgcatttgaccttt 147  Q
    ||||||||||||||||||||||||||||||    
T  20086247 ttaaaggacctttagatgcatttgaccttt 20086218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29677567 - 29677616
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||| ||||||  ||||||| ||||||| ||||||||||||||    
T  29677567 gaagcaattacaaactatgatatctacgataggacctgtttgaaacgatt 29677616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 36315268 - 36315297
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  36315268 cttaaaggacctttagatgcatttgacctt 36315297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 38446322 - 38446293
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  38446322 cttaaaggacctttagatgcatttgacctt 38446293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 44152545 - 44152516
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  44152545 cttaaaggacctttagatgcatttgacctt 44152516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 44152880 - 44152909
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  44152880 cttaaaggacctttagatgcatttgacctt 44152909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 1687858 - 1687886
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  1687858 cttaaaggacctttagatgcatttgacct 1687886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 19664386 - 19664358
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  19664386 cttaaaggacctttagatgcatttgacct 19664358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 20760367 - 20760395
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  20760367 cttaaaggacctttagatgcatttgacct 20760395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 21564370 - 21564342
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  21564370 cttaaaggacctttagatgcatttgacct 21564342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 21656725 - 21656753
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  21656725 cttaaaggacctttagatgcatttgacct 21656753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 33151932 - 33151960
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  33151932 cttaaaggacctttagatgcatttgacct 33151960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 50287411 - 50287383
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  50287411 cttaaaggacctttagatgcatttgacct 50287383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12759800 - 12759750
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12759800 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgattc 12759750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2057017 - 2057067
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  2057017 gaagcaattaccaactatgttatctacaataagacttgtttgaaacgattc 2057067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2094460 - 2094410
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  2094460 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 2094410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9276665 - 9276715
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  9276665 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 9276715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9331847 - 9331897
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  9331847 gaagcaattaccaacaatactatctacaataggacttgtttgaaacgattc 9331897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14630705 - 14630755
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  14630705 gaagcaattaccaactatgttatctacaatatgacttgtttgaaacgattc 14630755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16246243 - 16246193
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  16246243 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 16246193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17484600 - 17484550
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  17484600 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 17484550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27328675 - 27328725
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  27328675 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 27328725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33865317 - 33865267
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  33865317 gaagcaattaccaactatgttatctacaataagacttgtttgaaacgattc 33865267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37838388 - 37838438
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  37838388 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 37838438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40854700 - 40854750
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  40854700 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 40854750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17134320 - 17134369
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  17134320 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgatt 17134369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 34253234 - 34253283
Alignment:
Q  2 aagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  34253234 aagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 34253283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38751139 - 38751188
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  38751139 gaagcaattaccaactatactatctacattaggacttgtttgaaacgatt 38751188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 921113 - 921163
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  921113 gaagcaattatcaactatgctatctacaataggacttgtttgaaacgattc 921163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2456101 - 2456151
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  2456101 gaagcaattaccaactatgctatctacaataggacttgtttgaaacaattc 2456151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 11949472 - 11949426
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  11949472 caattaccaactatgctatctacaataggacttgtttgaaacgattc 11949426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19180512 - 19180562
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  19180512 gaagcaattactaactatactatctacaataagacttgtttgaaacgattc 19180562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28650476 - 28650426
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  28650476 gaagaaattaccaactatgctatctacaataggacttgtttgaaacgattc 28650426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33107019 - 33106969
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  33107019 gaagcaattaccaactatgatatctacaataggactcgtttgaaacgattc 33106969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41500552 - 41500502
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  41500552 gaagcaattaccaactatgctatgtacaataggacttgtttgaaacgattc 41500502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36444278 - 36444229
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  36444278 gaagcaattaccaactatgctatctactataggacttgtttgaaacgatt 36444229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 37732242 - 37732193
Alignment:
Q  2 aagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  37732242 aagcaattaccaactatgttatttacaataagacttgtttgaaacgattc 37732193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 772025 - 771981
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaa 45  Q
    ||||||||||||||||||  |||||||||||||||||||||||||    
T  772025 gaagcaattaccaactatgctatctacaataggacttgtttgaaa 771981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 36211254 - 36211290
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttttaaaaa 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  36211254 cttaaaggacctttagatgcatttgaccttttaaaaa 36211290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3430674 - 3430631
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaa 44  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  3430674 gaagcaattaccaactatgctatctacaataggacttgtttgaa 3430631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 7297280 - 7297234
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  7297280 caattaccaactatgctatctacaatatgacttgtttgaaacgattc 7297234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7379054 - 7379104
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||| || |||||||||||||||||||    
T  7379054 gaagcaattaccaactattctatctacattatgacttgtttgaaacgattc 7379104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23671861 - 23671811
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||| || ||||||| |||| |||||||||||||||||||    
T  23671861 gaagcaattaccaaccatgttatctataataagacttgtttgaaacgattc 23671811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36211137 - 36211182
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaac 46  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||    
T  36211137 gaagcaattacaaactatgttatctagaataggacttgtttgaaac 36211182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 148
Target Start/End: Complemental strand, 2094345 - 2094314
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctttt 148  Q
    ||||||||||||||||||||||||||||||||    
T  2094345 cttaaaggacctttagatgcatttgacctttt 2094314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1106609 - 1106559
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| |||  ||||||||||||||||| ||||||| |||||    
T  1106609 gaagcaattaccaattatgctatctacaataggacttatttgaaatgattc 1106559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 2315021 - 2314975
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  ||||||||||| |||||||||||||| ||||    
T  2315021 caattaccaactatgctatctacaataagacttgtttgaaacaattc 2314975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8899773 - 8899822
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||| ||||||||||||    
T  8899773 gaagcaattaccaactatgctatctacaatatgacttg-ttgaaacgattc 8899822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25087846 - 25087796
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| ||||||| |||| ||||||| |||||||||||||| ||||    
T  25087846 gaagcaattatcaactatgttatatacaataagacttgtttgaaacaattc 25087796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29737839 - 29737889
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||||||  |||| ||||||||||||||||||||| ||||    
T  29737839 gaagcaattatcaactatgctatcgacaataggacttgtttgaaacaattc 29737889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 45124214 - 45124260
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  ||||||||||| || ||||||||||||||||    
T  45124214 caattaccaactatgctatctacaataagatttgtttgaaacgattc 45124260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 920867 - 920838
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  920867 cttaaaggacctttagatgcatttgacctt 920838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 2094677 - 2094714
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttttaaaaat 154  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  2094677 cttaaaggacctttaaatgcatttgacctattaaaaat 2094714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 7297199 - 7297170
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  7297199 cttaaaggacctttagatgcatttgacctt 7297170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 37732127 - 37732098
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  37732127 cttaaaggacctttagatgcatttgacctt 37732098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 2057132 - 2057160
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  2057132 cttaaaggacctttagatgcatttgacct 2057160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 16246489 - 16246521
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctttta 149  Q
    |||||||||||||||||||||||||||| ||||    
T  16246489 cttaaaggacctttagatgcatttgaccattta 16246521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 23671746 - 23671718
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  23671746 cttaaaggacctttagatgcatttgacct 23671718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 27328791 - 27328819
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  27328791 cttaaaggacctttagatgcatttgacct 27328819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 28650360 - 28650332
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  28650360 cttaaaggacctttagatgcatttgacct 28650332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 37654301 - 37654329
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  37654301 cttaaaggacctttagatgcatttgacct 37654329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 37838504 - 37838532
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  37838504 cttaaaggacctttagatgcatttgacct 37838532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 38750892 - 38750864
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  38750892 cttaaaggacctttagatgcatttgacct 38750864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 42630169 - 42630201
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctttta 149  Q
    |||||| ||||||||||||||||||||||||||    
T  42630169 cttaaaagacctttagatgcatttgacctttta 42630201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12143163 - 12143213
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12143163 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgattc 12143213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33325818 - 33325868
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33325818 gaagcaattaccaactatgttatctacaataggacttgtttgaaacgattc 33325868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7553066 - 7553016
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  7553066 gaagcaattaccaactatgttatctacaatatgacttgtttgaaacgattc 7553016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9878834 - 9878784
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  9878834 gaagcaattaccaactattttatctacaatatgacttgtttgaaacgattc 9878784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18892420 - 18892470
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  18892420 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 18892470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38473676 - 38473626
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  38473676 gaagcaattaccaactatgatatctacaataggacttgtttgaaacgattc 38473626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41106107 - 41106157
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  41106107 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 41106157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 49094761 - 49094711
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  49094761 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 49094711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50690034 - 50690084
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  50690034 gaagcaattaccaactatgttatctacaatatgacttgtttgaaacgattc 50690084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19274650 - 19274699
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  19274650 gaagcaattaccagctatgttatctacaataggacttgtttgaaacgatt 19274699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 50533474 - 50533523
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgatt 50  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  50533474 gaagcaattaccaactatgttatctataataggacttgtttgaaacgatt 50533523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24204521 - 24204474
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacga 48  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  24204521 gaagcaattaccaactatgctatctacaataggacttgtttgaaacga 24204474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 45670537 - 45670486
Alignment:
Q  1 gaagcaattaccaa-ctatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  45670537 gaagcaattaccaaactatgttatctacaataggacttgtttgaaacgattc 45670486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5400961 - 5401011
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  5400961 gaagcaattaccaactatgctatctacaataggacttgtttgaaaagattc 5401011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6711531 - 6711581
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||| | ||||||||| |||||||||||||||||||    
T  6711531 gaagcaattaccaactataatgtctacaatatgacttgtttgaaacgattc 6711581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16705961 - 16706011
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||||||||    
T  16705961 gaagcaattaccaactatgttatctaaaataagacttgtttgaaacgattc 16706011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19315731 - 19315781
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  19315731 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacgattc 19315781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21929617 - 21929667
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  21929617 gaagcaattaccaactatgctatctacaatagaacttgtttgaaacgattc 21929667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21965156 - 21965206
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||||    
T  21965156 gaagcaattaccaattatgtcatctacaataggacttgtttgaaacgattc 21965206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23228244 - 23228194
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  23228244 gaagcaattaccaactatgctatctacaatagtacttgtttgaaacgattc 23228194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23767464 - 23767414
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  23767464 gaagcaattaccaactatgctatctacaatatgacttgtttgaaacgattc 23767414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 25988317 - 25988271
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  25988317 caattaccaactatgctatctacaataggacttgtttgaaacgattc 25988271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26549479 - 26549529
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  26549479 gaagcaattaccaactatgctatctacaataggacttgtttaaaacgattc 26549529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28425413 - 28425363
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  28425413 gaagcaattaccaactatgctatctgcaataggacttgtttgaaacgattc 28425363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 34971175 - 34971221
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  34971175 caattaccaactatgttatctacattaggacttgtttgaaacgattc 34971221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36781222 - 36781172
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  36781222 gaagcaattaccaactatgatatctacaataagacttgtttgaaacgattc 36781172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 37216991 - 37217037
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  37216991 caattaccaactatgctatctacaataggacttgtttgaaacgattc 37217037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 46051541 - 46051591
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  46051541 gaagcaattaccaactatgctatctacaacaggacttgtttgaaacgattc 46051591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 46095121 - 46095075
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  46095121 caattaccaactatgctatctacaataggacttgtttgaaacgattc 46095075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 46825622 - 46825672
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  46825622 gaagcaattaccaattatgctatctacaataggacttgtttgaaacgattc 46825672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48669446 - 48669396
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  48669446 gaagcaatcaccaactatgctatctacaataggacttgtttgaaacgattc 48669396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48802381 - 48802331
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  48802381 gaagcaattaccaactatgctatctacaataagacttgtttgaaacgattc 48802331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 52349974 - 52349924
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  52349974 gaagcaattaccaactatgctatttacaataggacttgtttgaaacgattc 52349924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 45350765 - 45350717
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  45350765 gaagcaattaccaactatgttatctacaatagg--ttgtttgaaacgattc 45350717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7608816 - 7608766
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||||||  |||||| ||||||||||||||||||||||||    
T  7608816 gaagcaattatcaactatgctatctataataggacttgtttgaaacgattc 7608766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7651753 - 7651803
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||||||  ||||||||||| |||||||||||||||||||    
T  7651753 gaagcaattatcaactatgctatctacaatatgacttgtttgaaacgattc 7651803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8141536 - 8141486
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||| || |||  |||||||||||||||||||||||||||||||    
T  8141536 gaagcaattacaaattatgctatctacaataggacttgtttgaaacgattc 8141486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9962842 - 9962892
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||||||||| || ||||||||||||||||||    
T  9962842 gaagcaattaccaactatgctatctacaacagaacttgtttgaaacgattc 9962892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25800733 - 25800782
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||| || |||||||||||| |||||||||||||||||||    
T  25800733 gaagcaattaccaac-atgttatctacaataagacttgtttgaaacgattc 25800782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 26069987 - 26070033
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  26069987 caattaccaactatgatatctacaatatgacttgtttgaaacgattc 26070033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33674108 - 33674158
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||| ||||  ||||||||||||||||||||||| |||||||    
T  33674108 gaagcaattaccagctatgctatctacaataggacttgtttgacacgattc 33674158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 33714407 - 33714361
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  33714407 caattatcaactatgttatctacaataggatttgtttgaaacgattc 33714361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 40721435 - 40721484
Alignment:
Q  2 aagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||| |||||||  |||||||||||||||||||| ||||||||||    
T  40721435 aagcaattatcaactatgctatctacaataggacttgttggaaacgattc 40721484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41982285 - 41982237
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgat 49  Q
    |||| ||||| ||||||| |||||||||||| |||||||||||||||||    
T  41982285 gaagtaattatcaactatgttatctacaatatgacttgtttgaaacgat 41982237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 148
Target Start/End: Original strand, 34971275 - 34971306
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctttt 148  Q
    ||||||||||||||||||||||||||||||||    
T  34971275 cttaaaggacctttagatgcatttgacctttt 34971306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17983948 - 17983898
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||| |||||| |||| |||| ||||||||| ||||||||||||    
T  17983948 gaagcaattacaaactatgttatttacattaggacttggttgaaacgattc 17983898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 25800848 - 25800878
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttt 147  Q
    |||||||||||||||||||||||||||||||    
T  25800848 cttaaaggacctttagatgcatttgaccttt 25800878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 28425297 - 28425267
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttt 147  Q
    |||||||||||||||||||||||||||||||    
T  28425297 cttaaaggacctttagatgcatttgaccttt 28425267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 36157708 - 36157678
Alignment:
Q  21 tatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||||||||||||||||    
T  36157708 tatctacaataggacttgtttgaaacgattc 36157678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 49594896 - 49594866
Alignment:
Q  117 cttaaaggacctttagatgcatttgaccttt 147  Q
    |||||||||||||||||||||||||||||||    
T  49594896 cttaaaggacctttagatgcatttgaccttt 49594866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 49814391 - 49814441
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||| |||| ||||| |||||||||||||    
T  49814391 gaagcaattaccaactatgctatctagaatatgacttatttgaaacgattc 49814441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 147
Target Start/End: Complemental strand, 24036605 - 24036576
Alignment:
Q  118 ttaaaggacctttagatgcatttgaccttt 147  Q
    ||||||||||||||||||||||||||||||    
T  24036605 ttaaaggacctttagatgcatttgaccttt 24036576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 24204405 - 24204376
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  24204405 cttaaaggacctttagatgcatttgacctt 24204376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 33673859 - 33673826
Alignment:
Q  120 aaaggacctttagatgcatttgaccttttaaaaa 153  Q
    |||||||||||||||||||||||||||| |||||    
T  33673859 aaaggacctttagatgcatttgacctttaaaaaa 33673826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 46051657 - 46051686
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  46051657 cttaaaggacctttagatgcatttgacctt 46051686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 6711678 - 6711706
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  6711678 cttaaaggacctttagatgcatttgacct 6711706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 16508195 - 16508223
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  16508195 cttaaaggacctttagatgcatttgacct 16508223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 19274765 - 19274793
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  19274765 cttaaaggacctttagatgcatttgacct 19274793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 26549233 - 26549205
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  26549233 cttaaaggacctttagatgcatttgacct 26549205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 36157973 - 36158001
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  36157973 cttaaaggacctttagatgcatttgacct 36158001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 37217103 - 37217131
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  37217103 cttaaaggacctttagatgcatttgacct 37217131  T

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Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 48802265 - 48802237
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  48802265 cttaaaggacctttagatgcatttgacct 48802237  T

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Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 218977 - 219027
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  218977 gaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 219027  T

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Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 252488 - 252438
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  252488 gaagcaattaccaactatgctatatacaataggacttgtttgaaacgattc 252438  T

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Target: scaffold1986 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 205 - 255
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||| |||||  |||||||| ||||||||||||||||||||||    
T  205 gaagcaattaccgactatgctatctacattaggacttgtttgaaacgattc 255  T

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Target: scaffold1986; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 293 - 322
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctt 146  Q
    ||||||||||||||||||||||||||||||    
T  293 cttaaaggacctttagatgcatttgacctt 322  T

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Target: scaffold0693 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 5073 - 5027
Alignment:
Q  5 caattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  5073 caattaccaactatgctatctacaatatgacttgtttgaaacgattc 5027  T

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Target: scaffold1562 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 630 - 680
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||  ||| ||||||||||||||||||||||    
T  630 gaagcaattaccaactatgctattaacattaggacttgtttgaaacgattc 680  T

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Target: scaffold1158 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1963 - 1913
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||  ||| ||||||||||||||||||||||    
T  1963 gaagcaattaccaactatgctattaacattaggacttgtttgaaacgattc 1913  T

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Target: scaffold0952 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3421 - 3371
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    ||||||||||||||||||  |||| ||| |||||||| |||||||||||||    
T  3421 gaagcaattaccaactatgctatcaacattaggacttatttgaaacgattc 3371  T

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Target: scaffold0717 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1908 - 1958
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||| |||||||  |||| ||| ||||||||||||||||||||||    
T  1908 gaagcaattatcaactatgctatcaacattaggacttgtttgaaacgattc 1958  T

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Target: scaffold0096 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 48053 - 48103
Alignment:
Q  1 gaagcaattaccaactatattatctacaataggacttgtttgaaacgattc 51  Q
    |||||||||||||||||| | || |||||| |||||||||| |||||||||    
T  48053 gaagcaattaccaactatgtgatatacaatcggacttgtttaaaacgattc 48103  T

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Target: scaffold0727 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 5392 - 5424
Alignment:
Q  117 cttaaaggacctttagatgcatttgacctttta 149  Q
    |||||||||||||||||||||||||||| ||||    
T  5392 cttaaaggacctttagatgcatttgaccattta 5424  T

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Target: scaffold0117 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 14523 - 14495
Alignment:
Q  117 cttaaaggacctttagatgcatttgacct 145  Q
    |||||||||||||||||||||||||||||    
T  14523 cttaaaggacctttagatgcatttgacct 14495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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