View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0935_low_10 (Length: 328)
Name: NF0935_low_10
Description: NF0935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0935_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 98 - 245
Target Start/End: Complemental strand, 52796237 - 52796090
Alignment:
| Q |
98 |
ccaatcactggccaacatcttggtccaggtggaagctgatgaccaagtttcactcttatatgtttcatcaccattgccaaccacatccataccaaaacgg |
197 |
Q |
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| T |
52796237 |
ccaaccactggccaacatcttggtccaggtggaagctgatgaccaagtttcactcttatatgtttcatcaccattgccaaccaaatccataccaaaacgg |
52796138 |
T |
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| Q |
198 |
ctagtaccaaacccacaaccccgtaatattccatatttacttcgtctg |
245 |
Q |
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| T |
52796137 |
ctagtaccaaacccacaaccccgtaatattccatatttacttcgtctg |
52796090 |
T |
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