View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0935_low_17 (Length: 251)
Name: NF0935_low_17
Description: NF0935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0935_low_17 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 6 - 251
Target Start/End: Original strand, 43984282 - 43984527
Alignment:
| Q |
6 |
agcagcagagaaatgaccaaaattagtaannnnnnnngcaccgagagctataataaactatgaagtatggcttaacttacaatacttgtgagtcatgcta |
105 |
Q |
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| T |
43984282 |
agcagcaaagaaatgaccaaaattagtaattttttttgcaccgagagctataataaactatgaagtatggcttaacttacaatacttgtgagtcatgcta |
43984381 |
T |
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| Q |
106 |
attagctccaaacacttgattagcacacaagtatacacatgcatgatagtactgctacaatatatgcaacagagttttaccaaatgaactcaattgagtt |
205 |
Q |
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| T |
43984382 |
attagctccaaacacttgattagcacacaagtatacacatgcatgatagtactgttacaatatatgcaacagagttttaccaaatgaactcaattgagtt |
43984481 |
T |
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| Q |
206 |
ttcccaatgatcagaaacttccaaccaacttagaattctatacgat |
251 |
Q |
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| T |
43984482 |
ttcccaatgatcagaaacttgcaaccaacttagaattctatacgat |
43984527 |
T |
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