View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0935_low_8 (Length: 378)

Name: NF0935_low_8
Description: NF0935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0935_low_8
NF0935_low_8
[»] chr5 (38 HSPs)
chr5 (35-137)||(27118431-27118533)
chr5 (154-303)||(9751566-9751714)
chr5 (154-303)||(28819555-28819704)
chr5 (154-303)||(35600427-35600576)
chr5 (231-300)||(9750543-9750612)
chr5 (154-303)||(28820445-28820593)
chr5 (154-303)||(35599332-35599481)
chr5 (231-303)||(19600069-19600141)
chr5 (154-300)||(19601159-19601304)
chr5 (253-300)||(32145824-32145871)
chr5 (254-303)||(4602896-4602945)
chr5 (254-295)||(11889997-11890038)
chr5 (141-190)||(11890101-11890150)
chr5 (231-294)||(29321202-29321265)
chr5 (253-300)||(32144980-32145027)
chr5 (255-301)||(15395662-15395708)
chr5 (136-190)||(21149103-21149157)
chr5 (157-190)||(9750470-9750503)
chr5 (141-188)||(10011623-10011671)
chr5 (141-188)||(10012810-10012858)
chr5 (263-303)||(29320240-29320280)
chr5 (141-190)||(29321309-29321360)
chr5 (231-294)||(4602265-4602328)
chr5 (141-187)||(15615108-15615155)
chr5 (253-283)||(5699872-5699902)
chr5 (141-190)||(15061825-15061875)
chr5 (154-188)||(19599990-19600024)
chr5 (254-300)||(23932348-23932394)
chr5 (129-190)||(21776908-21776972)
chr5 (141-181)||(23932466-23932507)
chr5 (231-283)||(11466610-11466662)
chr5 (154-190)||(11956159-11956195)
chr5 (154-190)||(11957650-11957686)
chr5 (154-190)||(15060183-15060219)
chr5 (154-190)||(15616501-15616537)
chr5 (127-182)||(30796570-30796626)
chr5 (154-190)||(41064164-41064200)
chr5 (154-190)||(41065658-41065694)
[»] chr6 (33 HSPs)
chr6 (141-294)||(14328544-14328698)
chr6 (141-294)||(14421554-14421708)
chr6 (231-303)||(3062285-3062357)
chr6 (141-300)||(3063376-3063535)
chr6 (231-303)||(26470145-26470216)
chr6 (231-303)||(20754462-20754534)
chr6 (231-303)||(26469102-26469172)
chr6 (253-293)||(20753400-20753440)
chr6 (141-190)||(54812-54861)
chr6 (231-300)||(3119416-3119485)
chr6 (154-285)||(14327388-14327518)
chr6 (154-285)||(14420398-14420528)
chr6 (132-190)||(22056478-22056538)
chr6 (231-300)||(30408683-30408751)
chr6 (231-283)||(18983013-18983065)
chr6 (131-276)||(23270126-23270271)
chr6 (232-300)||(32614268-32614336)
chr6 (232-283)||(18983914-18983964)
chr6 (261-300)||(25385465-25385504)
chr6 (141-190)||(56114-56164)
chr6 (312-370)||(26470162-26470220)
chr6 (255-301)||(26644583-26644629)
chr6 (255-301)||(26750549-26750595)
chr6 (136-181)||(5953162-5953207)
chr6 (141-181)||(7922322-7922363)
chr6 (231-300)||(12239793-12239862)
chr6 (148-181)||(26644099-26644132)
chr6 (148-181)||(26750065-26750098)
chr6 (141-181)||(17441407-17441447)
chr6 (154-190)||(22058280-22058316)
chr6 (154-190)||(24234349-24234385)
chr6 (141-190)||(24235632-24235683)
chr6 (231-283)||(30409579-30409630)
[»] chr4 (37 HSPs)
chr4 (154-303)||(34027084-34027232)
chr4 (206-303)||(51162146-51162243)
chr4 (141-300)||(550678-550838)
chr4 (231-303)||(7515678-7515750)
chr4 (231-300)||(34026011-34026079)
chr4 (231-300)||(44071193-44071262)
chr4 (231-300)||(47765348-47765417)
chr4 (254-303)||(48029529-48029578)
chr4 (231-303)||(44070179-44070250)
chr4 (252-291)||(12760650-12760689)
chr4 (231-293)||(937751-937813)
chr4 (239-301)||(41331874-41331936)
chr4 (137-181)||(35539605-35539650)
chr4 (141-190)||(44199856-44199905)
chr4 (231-303)||(54054273-54054345)
chr4 (255-302)||(39865870-39865917)
chr4 (253-284)||(48030184-48030215)
chr4 (253-300)||(54053687-54053734)
chr4 (156-190)||(9410284-9410318)
chr4 (141-190)||(21994332-21994382)
chr4 (250-300)||(43860624-43860674)
chr4 (141-190)||(43860915-43860965)
chr4 (141-190)||(50881424-50881474)
chr4 (141-190)||(54554388-54554438)
chr4 (141-170)||(1386039-1386068)
chr4 (141-181)||(41331774-41331815)
chr4 (141-190)||(53231779-53231828)
chr4 (154-190)||(9136406-9136442)
chr4 (256-300)||(12352351-12352395)
chr4 (141-190)||(12566940-12566991)
chr4 (154-190)||(13910853-13910889)
chr4 (154-190)||(34739908-34739944)
chr4 (154-190)||(34741395-34741431)
chr4 (256-300)||(39865130-39865174)
chr4 (256-300)||(43860804-43860848)
chr4 (231-283)||(47766079-47766131)
chr4 (154-190)||(51164022-51164058)
[»] scaffold0725 (2 HSPs)
scaffold0725 (141-300)||(3919-4079)
scaffold0725 (154-300)||(4848-4994)
[»] chr3 (40 HSPs)
chr3 (141-300)||(29184873-29185033)
chr3 (231-303)||(18141034-18141106)
chr3 (141-303)||(31173475-31173636)
chr3 (141-303)||(54567634-54567795)
chr3 (253-303)||(48044388-48044438)
chr3 (154-295)||(18142094-18142235)
chr3 (232-303)||(29183828-29183899)
chr3 (231-300)||(38344273-38344342)
chr3 (231-300)||(43112122-43112191)
chr3 (231-303)||(4217773-4217844)
chr3 (148-190)||(54566524-54566566)
chr3 (231-303)||(43112928-43113000)
chr3 (231-303)||(54566606-54566678)
chr3 (255-294)||(48076442-48076481)
chr3 (134-190)||(10615273-10615330)
chr3 (253-294)||(34061463-34061504)
chr3 (255-300)||(38243596-38243641)
chr3 (231-283)||(24909477-24909528)
chr3 (253-300)||(51545099-51545146)
chr3 (141-190)||(37977508-37977558)
chr3 (141-190)||(46610014-46610064)
chr3 (231-280)||(4218779-4218828)
chr3 (231-300)||(11359553-11359621)
chr3 (141-190)||(24528393-24528442)
chr3 (231-280)||(38343280-38343328)
chr3 (256-301)||(45291539-45291584)
chr3 (255-300)||(49263149-49263194)
chr3 (158-190)||(4218868-4218900)
chr3 (154-190)||(10616775-10616811)
chr3 (154-182)||(12210047-12210075)
chr3 (154-190)||(14824770-14824806)
chr3 (154-190)||(15086242-15086278)
chr3 (154-182)||(18140959-18140987)
chr3 (135-190)||(29313787-29313843)
chr3 (255-295)||(34062233-34062273)
chr3 (154-190)||(34062340-34062376)
chr3 (154-182)||(45291439-45291467)
chr3 (231-283)||(46207875-46207927)
chr3 (205-270)||(48044650-48044715)
chr3 (255-283)||(49265201-49265229)
[»] chr8 (35 HSPs)
chr8 (154-300)||(34901521-34901667)
chr8 (141-300)||(2269047-2269208)
chr8 (154-303)||(34902626-34902775)
chr8 (231-293)||(39515018-39515080)
chr8 (231-300)||(31986122-31986191)
chr8 (231-303)||(35322359-35322431)
chr8 (154-303)||(39513886-39514032)
chr8 (231-285)||(2270197-2270250)
chr8 (231-300)||(37402581-37402650)
chr8 (141-190)||(39808654-39808703)
chr8 (141-285)||(31985016-31985163)
chr8 (255-300)||(39451624-39451669)
chr8 (154-190)||(9768306-9768342)
chr8 (247-295)||(34504080-34504128)
chr8 (231-294)||(6819980-6820043)
chr8 (141-190)||(2270293-2270343)
chr8 (141-190)||(27164660-27164710)
chr8 (261-295)||(34375033-34375067)
chr8 (141-190)||(4105282-4105331)
chr8 (141-186)||(26447589-26447634)
chr8 (256-285)||(27407492-27407521)
chr8 (231-283)||(6819292-6819344)
chr8 (154-190)||(27163136-27163172)
chr8 (141-181)||(34374234-34374274)
chr8 (141-181)||(34504188-34504227)
chr8 (154-190)||(35322466-35322502)
chr8 (238-301)||(37125291-37125355)
chr8 (231-283)||(37403368-37403420)
chr8 (141-181)||(38500525-38500565)
chr8 (154-190)||(39452353-39452389)
chr8 (141-180)||(39515134-39515174)
chr8 (154-190)||(39810088-39810124)
chr8 (141-181)||(40652665-40652705)
chr8 (154-190)||(40702012-40702048)
chr8 (154-190)||(42348981-42349017)
[»] chr1 (53 HSPs)
chr1 (231-303)||(47145246-47145318)
chr1 (231-303)||(24545553-24545625)
chr1 (231-300)||(24546523-24546592)
chr1 (232-300)||(13903296-13903363)
chr1 (231-303)||(31645330-31645401)
chr1 (231-295)||(48716418-48716482)
chr1 (154-295)||(1826331-1826472)
chr1 (141-285)||(26095819-26095964)
chr1 (231-300)||(4414008-4414076)
chr1 (231-282)||(26096939-26096990)
chr1 (141-285)||(1825299-1825441)
chr1 (231-285)||(31648494-31648548)
chr1 (253-303)||(32131818-32131868)
chr1 (231-300)||(32130740-32130809)
chr1 (231-303)||(31648171-31648243)
chr1 (253-293)||(47146286-47146326)
chr1 (253-300)||(14978426-14978473)
chr1 (231-294)||(35978816-35978879)
chr1 (253-303)||(4415063-4415113)
chr1 (255-300)||(22591400-22591445)
chr1 (255-300)||(28414858-28414903)
chr1 (231-300)||(33645857-33645926)
chr1 (132-181)||(45832158-45832207)
chr1 (231-300)||(49201276-49201345)
chr1 (206-295)||(20132453-20132541)
chr1 (154-190)||(33667634-33667670)
chr1 (231-283)||(44753394-44753446)
chr1 (231-294)||(13902157-13902219)
chr1 (232-291)||(31837799-31837857)
chr1 (231-282)||(33667533-33667584)
chr1 (253-300)||(51471073-51471120)
chr1 (148-190)||(7780223-7780265)
chr1 (141-190)||(14625375-14625425)
chr1 (141-190)||(26097029-26097079)
chr1 (255-300)||(24962783-24962828)
chr1 (231-300)||(25601809-25601878)
chr1 (157-190)||(31648098-31648131)
chr1 (255-300)||(45833069-45833114)
chr1 (254-303)||(48717205-48717254)
chr1 (154-190)||(12277455-12277491)
chr1 (154-182)||(13903381-13903409)
chr1 (154-190)||(13917272-13917308)
chr1 (154-190)||(16785741-16785777)
chr1 (154-182)||(20132401-20132429)
chr1 (255-295)||(22592229-22592269)
chr1 (154-190)||(24730205-24730241)
chr1 (154-190)||(31648588-31648624)
chr1 (154-190)||(33934657-33934693)
chr1 (231-283)||(35979492-35979543)
chr1 (141-188)||(43635840-43635888)
chr1 (141-182)||(47146378-47146421)
chr1 (232-300)||(47221836-47221904)
chr1 (154-190)||(52084827-52084863)
[»] chr7 (22 HSPs)
chr7 (154-303)||(1589405-1589554)
chr7 (231-300)||(5218929-5218998)
chr7 (231-303)||(5217862-5217934)
chr7 (231-303)||(27159275-27159347)
chr7 (231-300)||(24757882-24757951)
chr7 (231-300)||(45865545-45865614)
chr7 (231-300)||(3766609-3766678)
chr7 (141-284)||(1594032-1594176)
chr7 (231-295)||(45864525-45864589)
chr7 (141-190)||(16902340-16902388)
chr7 (141-190)||(48104514-48104563)
chr7 (231-280)||(48945280-48945329)
chr7 (256-295)||(21237247-21237286)
chr7 (141-190)||(48168855-48168905)
chr7 (141-182)||(48896484-48896526)
chr7 (141-181)||(21298256-21298297)
chr7 (231-284)||(38092132-38092185)
chr7 (154-190)||(5219038-5219074)
chr7 (253-293)||(9351569-9351609)
chr7 (141-190)||(17763341-17763392)
chr7 (141-181)||(44414089-44414129)
chr7 (154-190)||(45865653-45865689)
[»] chr2 (37 HSPs)
chr2 (154-303)||(15747770-15747918)
chr2 (141-303)||(44241102-44241264)
chr2 (154-303)||(22468116-22468262)
chr2 (154-303)||(22474337-22474483)
chr2 (136-303)||(22466981-22467151)
chr2 (257-303)||(11829972-11830018)
chr2 (231-303)||(28461160-28461231)
chr2 (231-303)||(44242245-44242317)
chr2 (231-294)||(28142788-28142851)
chr2 (233-300)||(28462384-28462451)
chr2 (231-300)||(15748901-15748970)
chr2 (231-294)||(28141786-28141849)
chr2 (260-303)||(38528600-38528643)
chr2 (148-190)||(43015203-43015245)
chr2 (141-182)||(38935950-38935991)
chr2 (132-190)||(44366863-44366923)
chr2 (141-190)||(7576330-7576381)
chr2 (141-181)||(9011996-9012036)
chr2 (141-183)||(5970763-5970805)
chr2 (141-190)||(15809377-15809427)
chr2 (141-190)||(16670504-16670554)
chr2 (141-190)||(30371390-30371440)
chr2 (148-181)||(11101106-11101139)
chr2 (141-181)||(18701556-18701597)
chr2 (141-181)||(28484603-28484644)
chr2 (141-186)||(29098256-29098300)
chr2 (255-300)||(34404483-34404528)
chr2 (154-190)||(1902950-1902986)
chr2 (154-190)||(1904410-1904446)
chr2 (154-190)||(15749010-15749046)
chr2 (154-190)||(19684222-19684258)
chr2 (154-190)||(23834601-23834637)
chr2 (154-182)||(28462503-28462531)
chr2 (141-181)||(37200352-37200392)
chr2 (141-188)||(38937512-38937560)
chr2 (154-190)||(39341285-39341321)
chr2 (253-301)||(45323785-45323833)
[»] scaffold0039 (1 HSPs)
scaffold0039 (237-300)||(111436-111499)
[»] scaffold0014 (2 HSPs)
scaffold0014 (231-300)||(228480-228549)
scaffold0014 (141-285)||(227374-227521)
[»] scaffold0095 (1 HSPs)
scaffold0095 (255-300)||(10474-10519)
[»] scaffold0250 (1 HSPs)
scaffold0250 (257-293)||(4687-4723)
[»] scaffold0007 (1 HSPs)
scaffold0007 (231-283)||(14926-14978)
[»] scaffold0246 (1 HSPs)
scaffold0246 (141-190)||(15877-15927)
[»] scaffold0136 (1 HSPs)
scaffold0136 (231-285)||(36650-36704)
[»] scaffold1797 (1 HSPs)
scaffold1797 (154-190)||(680-716)
[»] scaffold0176 (1 HSPs)
scaffold0176 (141-190)||(289-340)


Alignment Details
Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 35 - 137
Target Start/End: Original strand, 27118431 - 27118533
Alignment:
Q  35 catattgtggattcttaaaattgtaaaacggattatgttgttttcacatagtgatggggtttgggaagtgcattagaaatgataaatggagttaattaat 134  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  27118431 catattgtggattcttaaccttgtaaaacggattattttgttttcacatagtgatggggtttgggaagtgcattagaaataataaagggagttaattaat 27118530  T
Q  135 ttg 137  Q
    |||    
T  27118531 ttg 27118533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 303
Target Start/End: Complemental strand, 9751714 - 9751566
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    ||||||||||||||||||||||||||||| |||||||           ||| |||| |||||||||||||       ||||||||||||||| || || |    
T  9751714 ccctgtaatataggtcacttttggttttgccccctgtaaattttttttttt-gattcggtccttgtaaaatttttttgttttggaaaacccccctagacc 9751616  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  9751615 agctgactgtgcatttttgctgatgtggcatgttgtgtcagcctttttgg 9751566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 154 - 303
Target Start/End: Original strand, 28819555 - 28819704
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    ||||||||||||||||||||||||||||| |||||||           ||| |||| |||||||||||||       ||||||||||||||| || || |    
T  28819555 ccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaaatttggattcggtccttgtaaaaaaattttgttttggaaaacccccctagacc 28819654  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||||||||||||||||||||| || |||||| | |||||||||||||||    
T  28819655 agctgactgtgcatttttgctgttggggcatgctacgtcaccctttttgg 28819704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 154 - 303
Target Start/End: Complemental strand, 35600576 - 35600427
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    ||||||||||||||||||||||||||||| ||| |||           ||||||||||||||||||||||       |||||| |||||||| || || |    
T  35600576 ccctgtaatataggtcacttttggttttgccccttgtaaaaaaaaatttttagatttggtccttgtaaaatttttttgttttgaaaaacccccctagacc 35600477  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||| ||||||||||||||||||||||||||| | ||||||| |||||||    
T  35600476 agctaactgtgcatttttgctgatgtggcatgctccgtcaccttttttgg 35600427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 9750543 - 9750612
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9750543 gttttggaaaacccccctagaccagctgactgtgcatttttgctgatgtggcatgttgcgtcaccttttt 9750612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 303
Target Start/End: Complemental strand, 28820593 - 28820445
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    ||||||||||||||||||||||| ||||| |||||||            || |||| |||||||||||||       ||||||||||||||| || || |    
T  28820593 ccctgtaatataggtcacttttgattttgccccctgtaaaaaaaaaaaattggattcggtccttgtaaaaattttttgttttggaaaacccc-ctagacc 28820495  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  28820494 agctgacggtgcatttttgctgatgtggcatgttgtgtcaccctttttgg 28820445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 303
Target Start/End: Original strand, 35599332 - 35599481
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    ||||||||||||||||||||||||||||| |||||||           |||||||| |||||||||||         ||||||||||||||| || || |    
T  35599332 ccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaaatttagattcggtccttgtaatttttttttgttttggaaaacccccctagacc 35599431  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||||||||||||||||| ||||||||||||| | ||||||| |||||||    
T  35599432 agctgactgtgcattttttctgatgtggcatgctccgtcaccttttttgg 35599481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 19600069 - 19600141
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||| || || |||| ||||||||||||||||| |||||||||||||| |||||||||||||    
T  19600069 gttttggaaaacccccctagaccagccgactgtgcatttttgctaatgtggcatgttgcttcaccctttttgg 19600141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 300
Target Start/End: Complemental strand, 19601304 - 19601159
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    |||||||||||||||||||||||||||||   |||||           ||| |||| |||||||||||||       ||||||||||||||| || || |    
T  19601304 ccctgtaatataggtcacttttggttttgcatcctgtaaaaaaaaaattttggattcggtccttgtaaaatttttttgttttggaaaacccc-ctagacc 19601206  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  19601205 agctgactgtgcatttttgttgatgtggcatgatgcgtcaccttttt 19601159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 253 - 300
Target Start/End: Complemental strand, 32145871 - 32145824
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32145871 cagctgactgtgcatttttgctgatgtggcatgttgcgtcaccttttt 32145824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 4602945 - 4602896
Alignment:
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||||||||||||||||||||||||||||||||||| ||| | |||||||    
T  4602945 agctgactgtgcatttttgctgatgtggcatgttgcatcatcttttttgg 4602896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 11890038 - 11889997
Alignment:
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcacc 295  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  11890038 agctgactgtgcatttttgctgatgtggcatgttgtgtcacc 11889997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 11890150 - 11890101
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  11890150 aataggcctttacccctgtaatataggtcacttttggttttgccccctgt 11890101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 29321265 - 29321202
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcac 294  Q
    |||||||||||| || || || ||||||| ||||||||| ||||||||||||||| ||||||||    
T  29321265 gttttggaaaactcccctagaccagctgaatgtgcatttatgctgatgtggcatgctgcgtcac 29321202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 300
Target Start/End: Original strand, 32144980 - 32145027
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||||||||||||||||||||| || |||||| ||||    
T  32144980 cagctgactgtgcatttttgctgatgtggcatgctgtgtcaccttttt 32145027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 301
Target Start/End: Original strand, 15395662 - 15395708
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcacccttttt 301  Q
    ||||||||||||||||||||||||||||||| || |||||| |||||    
T  15395662 gctgactgtgcatttttgctgatgtggcatgctgtgtcacctttttt 15395708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 21149157 - 21149103
Alignment:
Q  136 tggtcaataggtctttatccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||| | ||||||    
T  21149157 tggttaataggtctttacccctgtaatataggtcatttttggttttcttccctgt 21149103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 9750470 - 9750503
Alignment:
Q  157 tgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||||||||||||||||||||||    
T  9750470 tgtaatataggtcacttttggttttgtcccctgt 9750503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 10011623 - 10011671
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccct 188  Q
    |||||||||||||||| ||||||||||| |||||||||||||| |||||    
T  10011623 aataggtctttatcccgtgtaatataggacacttttggttttgccccct 10011671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 10012858 - 10012810
Alignment:
Q  141 aataggtctttatcc-ctgtaatataggtcacttttggttttgtcccct 188  Q
    ||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  10012858 aataggtctttatcctctgtaatatagggtacttttggttttgtcccct 10012810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 303
Target Start/End: Original strand, 29320240 - 29320280
Alignment:
Q  263 tgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||||||||||| |||||| ||||||||||    
T  29320240 tgcatttttgctgatgtggcatgctgcgtcgccctttttgg 29320280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 29321360 - 29321309
Alignment:
Q  141 aataggtctttatccc--tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||||   |||||||||||||| |||||||||||||||||||    
T  29321360 aataggtctttatcctcatgtaatataggtcatttttggttttgtcccctgt 29321309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 4602265 - 4602328
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcac 294  Q
    ||||||||||||||  || |  ||| |||||||||||||||||||||||| ||||||| |||||    
T  4602265 gttttggaaaaccctcctaggccagttgactgtgcatttttgctgatgtgacatgttgtgtcac 4602328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 15615108 - 15615155
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccc 187  Q
    |||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  15615108 aataggtctttaccccctgtaatatagggcacttttggttttgtcccc 15615155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 283
Target Start/End: Original strand, 5699872 - 5699902
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggca 283  Q
    |||||||||||||||||||||||||||||||    
T  5699872 cagctgactgtgcatttttgctgatgtggca 5699902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 15061875 - 15061825
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||| ||||||||||| |||||||||||||| |||||||    
T  15061875 aataggtctttaccccctgtaatatagggcacttttggttttgccccctgt 15061825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 19599990 - 19600024
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccct 188  Q
    ||||||||||||||||||||||||||||| |||||    
T  19599990 ccctgtaatataggtcacttttggttttgccccct 19600024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 300
Target Start/End: Complemental strand, 23932394 - 23932348
Alignment:
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||||| |||||||||||||| || |||||| ||||    
T  23932394 agctgactgtgcattttcgctgatgtggcatgctgagtcaccgtttt 23932348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 21776972 - 21776908
Alignment:
Q  129 attaatttgg-tcaataggtctttatccct--gtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||| | |||||||||||| ||||  |||||||||| |||||||||||||| |||||||    
T  21776972 attaatttgggttaataggtctttacccctctgtaatatagggcacttttggttttgccccctgt 21776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 23932507 - 23932466
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggtttt 181  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  23932507 aataggtctttatcccctgcaatataggtcacttttggtttt 23932466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 11466662 - 11466610
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggca 283  Q
    ||||||||| ||||  || | ||||||||||||||||||| ||||||||||||    
T  11466662 gttttggaataccctcctaggtcagctgactgtgcattttcgctgatgtggca 11466610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 11956159 - 11956195
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  11956159 ccctgtaatatagggcacttttggttttggcccctgt 11956195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 11957686 - 11957650
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  11957686 ccctgtaatatagggcacttttggttttgccccctgt 11957650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 15060183 - 15060219
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  15060183 ccctgtaatataggacacttttggttttgccccctgt 15060219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 15616537 - 15616501
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  15616537 ccctgtaatataggacacttttggttttgccccctgt 15616501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 30796570 - 30796626
Alignment:
Q  127 taattaatttggtcaataggtctttatccc-tgtaatataggtcacttttggttttg 182  Q
    ||||||||| ||| |||||||||||| ||| | ||||||||| ||||||||||||||    
T  30796570 taattaattgggttaataggtctttaccccctataatatagggcacttttggttttg 30796626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 41064164 - 41064200
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  41064164 ccctgtaatatagggcacttttggttttgccccctgt 41064200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 41065694 - 41065658
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  41065694 ccctgtaatatagggcacttttggttttggcccctgt 41065658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 294
Target Start/End: Complemental strand, 14328698 - 14328544
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaa 239  Q
    |||||||||||| ||| |||||||||||||||||||||||||| |||||||           |||||||| | |||||||||||       |||||||||    
T  14328698 aataggtctttaccccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaactttagattcgatccttgtaaaatttttttgttttggaa 14328599  T
Q  240 aacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcac 294  Q
    |||||| || || ||||||||||||||||||||||||||||||||||| ||||||    
T  14328598 aacccccctagaccagctgactgtgcatttttgctgatgtggcatgttccgtcac 14328544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 294
Target Start/End: Complemental strand, 14421708 - 14421554
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaa 239  Q
    |||||||||||| ||| |||||||||||||||||||||||||| |||||||           |||||||| | |||||||||||       |||||||||    
T  14421708 aataggtctttaccccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaactttagattcgatccttgtaaaatttttttgttttggaa 14421609  T
Q  240 aacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcac 294  Q
    |||||| || || ||||||||||||||||||||||||||||||||||| ||||||    
T  14421608 aacccccctagaccagctgactgtgcatttttgctgatgtggcatgttccgtcac 14421554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 3062285 - 3062357
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||| || || |||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  3062285 gttttggaaaacccccctagaccagctgactgtgcatttttgctgatgtggcatgttgtgtcacccattttgg 3062357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 141 - 300
Target Start/End: Complemental strand, 3063535 - 3063376
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaa 239  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||| ||             || |||| |||||||||||||       |||||||||    
T  3063535 aataggtctttaccccctgtaatataggtcacttttggttttgccccttgaaaaaaaaaaaaattggattcggtccttgtaaaatttttttgttttggaa 3063436  T
Q  240 aacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||| || || ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  3063435 aacccc-ctagaccagctgactgtgcatttttgctgatgtggcatgctgcgtcaccttttt 3063376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 26470216 - 26470145
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||| || || ||| ||||||||||||||||||||||||||||| ||||||||| |||||||    
T  26470216 gttttggaaaacccc-ctagaccagttgactgtgcatttttgctgatgtggcatgctgcgtcaccttttttgg 26470145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 20754534 - 20754462
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||  || || ||||||||||| ||||||||||||| || |||||||||||||| |||||||    
T  20754534 gttttggaaaacccacctagaccagctgactgtacatttttgctgatatgacatgttgcgtcaccttttttgg 20754462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 26469102 - 26469172
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||| || || || |||||||  ||||||||||||||||||||| ||||||||| |||||||    
T  26469102 gttttggaaaacccccctagaccaactgactg--catttttgctgatgtggcatgctgcgtcaccttttttgg 26469172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 20753400 - 20753440
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggcatgttgcgtca 293  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  20753400 cagctgactgtgcatttttgctgatgtggcatgctgcgtca 20753440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 54812 - 54861
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||   ||||||||||||| ||||||||||||||||||||||    
T  54812 aataggtctttcctcctgtaatataggacacttttggttttgtcccctgt 54861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 3119416 - 3119485
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| || |  |||||||||||||||||| |||||||||||| | || |||||| ||||    
T  3119416 gttttggaaaacccccctaggccagctgactgtgcattttcgctgatgtggcacgctgagtcaccatttt 3119485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 285
Target Start/End: Original strand, 14327388 - 14327518
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    |||||||||||| |||||||||||||||| |||||||           ||| |||| |||| ||||||||       |||||||||||||||| | || |    
T  14327388 ccctgtaatatacgtcacttttggttttgccccctgtaaaaaaaaaactttcgattcggtctttgtaaaatttttttgttttggaaaacccct-tagacc 14327486  T
Q  254 agctgactgtgcatttttgctgatgtggcatg 285  Q
    ||||||||||  ||||||||||||||||||||    
T  14327487 agctgactgtatatttttgctgatgtggcatg 14327518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 285
Target Start/End: Original strand, 14420398 - 14420528
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    |||||||||||| |||||||||||||||| |||||||           ||| |||| |||| ||||||||       |||||||||||||||| | || |    
T  14420398 ccctgtaatatacgtcacttttggttttgccccctgtaaaaaaaaaactttcgattcggtctttgtaaaatttttttgttttggaaaacccct-tagacc 14420496  T
Q  254 agctgactgtgcatttttgctgatgtggcatg 285  Q
    ||||||||||  ||||||||||||||||||||    
T  14420497 agctgactgtatatttttgctgatgtggcatg 14420528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 22056478 - 22056538
Alignment:
Q  132 aatttggtcaataggtcttta--tccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||| ||| ||||||||||||  ||||||||||||||| |||||||||||||| |||||||    
T  22056478 aattgggttaataggtctttaactccctgtaatatagggcacttttggttttgccccctgt 22056538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 30408683 - 30408751
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| || |  |||||||||||||||||| |||||||||||||| || |||||| ||||    
T  30408683 gttttggaaaacccc-ctaggccagctgactgtgcattttcgctgatgtggcatgctgagtcaccatttt 30408751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 18983013 - 18983065
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggca 283  Q
    ||||||||||||||| || |  |||||||||||||||||| ||||||||||||    
T  18983013 gttttggaaaacccccctaggccagctgactgtgcattttcgctgatgtggca 18983065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 276
Target Start/End: Complemental strand, 23270271 - 23270126
Alignment:
Q  131 taatttggtcaataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnn 229  Q
    ||||| ||| |||||||||||| ||| | |||||||||||||||||| |||||||| ||||           ||| |||| |||||||||||||          
T  23270271 taattgggttaataggtctttaccccctttaatataggtcacttttgattttgtcctctgtaaaattattttttt-gattcggtccttgtaaaaaaaatt 23270173  T
Q  230 ngttttggaaaacccctctggatcagctgactgtgcatttttgctga 276  Q
     ||||| ||||||||| || || ||||||||||||||||||||||||    
T  23270172 tgttttcgaaaacccccctagaccagctgactgtgcatttttgctga 23270126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 32614268 - 32614336
Alignment:
Q  232 ttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||||| || |  ||||||||||||||||||| |||||||| |||| ||| ||||| ||||    
T  32614268 ttttggaaaacccccctaggccagctgactgtgcatttttactgatgtgacatgatgcctcaccttttt 32614336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 18983964 - 18983914
Alignment:
Q  232 ttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggca 283  Q
    |||||||||||||| || | ||||||||||||||||||| ||||||||||||    
T  18983964 ttttggaaaacccc-ctaggtcagctgactgtgcattttcgctgatgtggca 18983914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 25385465 - 25385504
Alignment:
Q  261 tgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  25385465 tgtgcatttttgctgaggtggcatgttgcgtcaccttttt 25385504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 56164 - 56114
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||| ||||||||||| |||||||| |||||||||||||    
T  56164 aataggtctttaccccctgtaatatagggcacttttgattttgtcccctgt 56114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 26470162 - 26470220
Alignment:
Q  312 gcatgccacaacagcaaaaatgcacagtccacttgtccaaggggttttcccacacaaaa 370  Q
    |||||||||| |||||||||||||||||| ||| ||| | |||||||||| | ||||||    
T  26470162 gcatgccacatcagcaaaaatgcacagtcaactggtctagggggttttccaaaacaaaa 26470220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 301
Target Start/End: Complemental strand, 26644629 - 26644583
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcacccttttt 301  Q
    |||||||||||||||||||||||||||  ||||| |||||| |||||    
T  26644629 gctgactgtgcatttttgctgatgtggattgttgggtcacctttttt 26644583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 301
Target Start/End: Complemental strand, 26750595 - 26750549
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcacccttttt 301  Q
    |||||||||||||||||||||||||||  ||||| |||||| |||||    
T  26750595 gctgactgtgcatttttgctgatgtggattgttgggtcacctttttt 26750549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 5953162 - 5953207
Alignment:
Q  136 tggtcaataggtctttatccctgtaatataggtcacttttggtttt 181  Q
    |||| |||||||||||| ||||||||||||||||| || |||||||    
T  5953162 tggttaataggtctttacccctgtaatataggtcatttctggtttt 5953207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 7922322 - 7922363
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggtttt 181  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  7922322 aataggtctttatcccctgtaatataggtcatttttggtttt 7922363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 12239862 - 12239793
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| || |  |||||||||||||||||  |||||||||||| | || |||||| ||||    
T  12239862 gttttggaaaacccccctaggccagctgactgtgcatttccgctgatgtggcacggtgagtcaccatttt 12239793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 26644099 - 26644132
Alignment:
Q  148 ctttatccctgtaatataggtcacttttggtttt 181  Q
    ||||| ||||||||||||||||||||||||||||    
T  26644099 ctttacccctgtaatataggtcacttttggtttt 26644132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 26750065 - 26750098
Alignment:
Q  148 ctttatccctgtaatataggtcacttttggtttt 181  Q
    ||||| ||||||||||||||||||||||||||||    
T  26750065 ctttacccctgtaatataggtcacttttggtttt 26750098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 17441407 - 17441447
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggtttt 181  Q
    |||||||||||| ||||||||||||||||| ||| ||||||    
T  17441407 aataggtctttacccctgtaatataggtcattttcggtttt 17441447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 22058316 - 22058280
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  22058316 ccctgtaatatagggcacttttggttttgccccctgt 22058280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 24234349 - 24234385
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  24234349 ccctgtaatataggacacttttggttttgccccctgt 24234385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 24235683 - 24235632
Alignment:
Q  141 aataggtctttatccct--gtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||||  |||||||||| |||||||||||||| |||||||    
T  24235683 aataggtctttacccctctgtaatatagggcacttttggttttgccccctgt 24235632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 30409630 - 30409579
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggca 283  Q
    ||||||||||||||| || |  |||||||||||||||||| ||||||||||||    
T  30409630 gttttggaaaacccc-ctaggccagctgactgtgcattttcgctgatgtggca 30409579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 303
Target Start/End: Complemental strand, 34027232 - 34027084
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    ||||||||||||||||||||||||||||| |||||||           ||| |||| |||||||||||||       ||||||||||||||| || || |    
T  34027232 ccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaacttttcgattcggtccttgtaaaatttttttgttttggaaaacccc-ctagacc 34027134  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  34027133 agctgactgtgcatttttgctgatgtggcatgttgtgtcagcctttttgg 34027084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 303
Target Start/End: Original strand, 51162146 - 51162243
Alignment:
Q  206 gatttggtccttgtaaaannnnnnngttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||||||       ||||||||||||||| || || || ||||||||||||||||| |||||||||||||||||||||| |||||||    
T  51162146 gatttggtccttgtaaaaaaaatttgttttggaaaacccccctagaccaactgactgtgcatttttgttgatgtggcatgttgcgtcaccttttttgg 51162243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 550678 - 550838
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaa 239  Q
    |||||||||||| ||| |||||||||||||| |||| |||||| ||| |||           ||| |||| |||||||||||||       |||||||||    
T  550678 aataggtctttaccccctgtaatataggtcatttttagttttgccccttgtaaaattttttttttggattcggtccttgtaaaatttttttgttttggaa 550777  T
Q  240 aacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||| || || ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  550778 aacccccctagaccagctgactgtgcatttttgctgatgtggcatgctgcgtcaccttttt 550838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 7515750 - 7515678
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||| || ||  |||| | ||||||||||||||||||||||||| |||||||||||||||||    
T  7515750 gttttggaaaacccccctagactagctaattgtgcatttttgctgatgtggcatgctgcgtcaccctttttgg 7515678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 34026011 - 34026079
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| || || ||| |||||||| ||||||||||||||| |||||||||||||| ||||    
T  34026011 gttttggaaaacccc-ctagaccagttgactgtgtatttttgctgatgtgacatgttgcgtcaccttttt 34026079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 44071262 - 44071193
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| ||  | || |||||||||||||||| ||||||||||||| ||||||||| ||||    
T  44071262 gttttggaaaacccccctaaaccaactgactgtgcatttttactgatgtggcatgctgcgtcaccttttt 44071193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 47765348 - 47765417
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||||||||| |  |||||||||||||||||| |||||||||||| | || |||||| ||||    
T  47765348 gttttggaaaacccctctaggccagctgactgtgcattttcgctgatgtggcacgctgagtcaccatttt 47765417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 48029529 - 48029578
Alignment:
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||||||||||||| ||||||||| |||||| |||||||    
T  48029529 agctgactgtgcatttttgctgatgaggcatgttgtgtcaccttttttgg 48029578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 44070179 - 44070250
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||| || || |||||||||||||||||||||||||||| ||||   ||||||| |||||||    
T  44070179 gttttggaaaacccc-ctagaccagctgactgtgcatttttgctgatgtgacatgcaacgtcaccttttttgg 44070250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 291
Target Start/End: Complemental strand, 12760689 - 12760650
Alignment:
Q  252 tcagctgactgtgcatttttgctgatgtggcatgttgcgt 291  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  12760689 tcagctgactgtgcattttcgctgatgtggcatgttgcgt 12760650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 937751 - 937813
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtca 293  Q
    ||||||||||||||| || |  ||||||||||| |||||||||||||||| |||||| |||||    
T  937751 gttttggaaaaccccactaggccagctgactgtacatttttgctgatgtgacatgttccgtca 937813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 41331874 - 41331936
Alignment:
Q  239 aaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcacccttttt 301  Q
    ||||||| || ||||||||||||||||||||| |||||||||||| | || |||||| |||||    
T  41331874 aaacccccctagatcagctgactgtgcattttcgctgatgtggcacgctgagtcacctttttt 41331936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 35539605 - 35539650
Alignment:
Q  137 ggtcaataggtctttatccc-tgtaatataggtcacttttggtttt 181  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||    
T  35539605 ggtcaataggtctttatcccctgtaatataggtcatttttggtttt 35539650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 44199905 - 44199856
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||| |||||||| ||||||||| |||||||||||||||| |||||||    
T  44199905 aataggcctttatccttgtaatatacgtcacttttggttttgccccctgt 44199856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 54054345 - 54054273
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||| | || |  ||||||||||||||||||| ||||||||||||| ||  ||||| |||||||    
T  54054345 gttttggaaaacctccctaggccagctgactgtgcatttttactgatgtggcatgatgtctcaccttttttgg 54054273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 39865917 - 39865870
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttg 302  Q
    |||||||||||||||||||||||||| |||| || |||||| ||||||    
T  39865917 gctgactgtgcatttttgctgatgtgacatgatgtgtcaccttttttg 39865870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 284
Target Start/End: Complemental strand, 48030215 - 48030184
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggcat 284  Q
    ||||||||||||||||||||||||||||||||    
T  48030215 cagctgactgtgcatttttgctgatgtggcat 48030184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 300
Target Start/End: Original strand, 54053687 - 54053734
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||| |||||||||||||||||||| ||| ||||| ||||    
T  54053687 cagctgactgtgtatttttgctgatgtggcatgatgcatcaccttttt 54053734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 190
Target Start/End: Complemental strand, 9410318 - 9410284
Alignment:
Q  156 ctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||||||||||||||||||||||    
T  9410318 ctgtaatatagggcacttttggttttgtcccctgt 9410284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 21994332 - 21994382
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||| ||||||||||| |||||||| |||||||||||||    
T  21994332 aataggtctttaccccctgtaatataggacacttttgattttgtcccctgt 21994382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 43860624 - 43860674
Alignment:
Q  250 gatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||||||||| |||||||||||| | ||  ||||||||||    
T  43860624 gatcagctgactgtgcattttcgctgatgtggcacgctgattcaccctttt 43860674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 43860965 - 43860915
Alignment:
Q  141 aataggtctttatc-cctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| | ||||||||||||| |||||||||||||||| |||||    
T  43860965 aataggtctttacctcctgtaatatagggcacttttggttttgtctcctgt 43860915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 50881474 - 50881424
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||| ||||||||||| |||||||||||||| |||||||    
T  50881474 aataggtctttaccccctgtaatataggccacttttggttttgccccctgt 50881424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 54554388 - 54554438
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||| ||||||||||| |||||||||||||| |||||||    
T  54554388 aataggtctttaccccctgtaatatagggcacttttggttttgccccctgt 54554438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 170
Target Start/End: Original strand, 1386039 - 1386068
Alignment:
Q  141 aataggtctttatccctgtaatataggtca 170  Q
    ||||||||||||||||||||||||||||||    
T  1386039 aataggtctttatccctgtaatataggtca 1386068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 41331774 - 41331815
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggtttt 181  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  41331774 aataggtctttatcccctgcaatataggtcacttttggtttt 41331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 53231779 - 53231828
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||| |||||| ||||||||||||||||| |||||||||| ||| ||||    
T  53231779 aatagatctttacccctgtaatataggtcatttttggttttttcctctgt 53231828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 9136442 - 9136406
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  9136442 ccctgtaatatagatcacttttggttttgccccctgt 9136406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 12352395 - 12352351
Alignment:
Q  256 ctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||| ||||| |||||||||||||| ||||||||| ||||    
T  12352395 ctgactgtgaattttcgctgatgtggcatgctgcgtcaccttttt 12352351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 12566991 - 12566940
Alignment:
Q  141 aataggtctttatccc--tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| |||  ||||||||||| |||||||||||||| |||||||    
T  12566991 aataggtctttacccccttgtaatatagggcacttttggttttgccccctgt 12566940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 13910889 - 13910853
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  13910889 ccctgtaatataggtcatttttggttttctcccctgt 13910853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 34739908 - 34739944
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  34739908 ccctgtaatatagggcacttttggttttggcccctgt 34739944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 34741431 - 34741395
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  34741431 ccctgtaatatagggcacttttggttttgccccctgt 34741395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 39865130 - 39865174
Alignment:
Q  256 ctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||||| |||||||||||| || |||||| ||||    
T  39865130 ctgactgtgcatttttggtgatgtggcatgatgtgtcaccttttt 39865174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 43860848 - 43860804
Alignment:
Q  256 ctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| |||||||||||||| || |||||| ||||    
T  43860848 ctgactgtgcattttcgctgatgtggcatgctgagtcaccttttt 43860804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 47766131 - 47766079
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggca 283  Q
    |||||||||||||||||| |  |||||||||||| |||||  |||||||||||    
T  47766131 gttttggaaaacccctctaggccagctgactgtgtattttcactgatgtggca 47766079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 51164058 - 51164022
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||| |||||||||||||||||||||||| |||||||    
T  51164058 ccctataatataggtcacttttggttttgccccctgt 51164022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 3919 - 4079
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaa 239  Q
    |||||||||||| ||| |||||| |||| |||||||||||||| |||||||           ||| |||| |||||||||||||       |||||||||    
T  3919 aataggtctttaccccctgtaatgtaggacacttttggttttgccccctgtaaaaaatttttttttgattcggtccttgtaaaaaaattttgttttggaa 4018  T
Q  240 aacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||| || || ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4019 aacccccctagaccagctgactgtgcatttttgctgatgtggcatgttgcgtcaccttttt 4079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 300
Target Start/End: Complemental strand, 4994 - 4848
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    ||||||||||||||||||||||||||||| |||||||           ||| |||| |||||||||||||       ||||||||||||||  || ||||    
T  4994 ccctgtaatataggtcacttttggttttgccccctgtaaattttttttttttgattcggtccttgtaaaatttttttgttttggaaaacccacctagatc 4895  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||||    
T  4894 agctgactgtgcatttttgctgatgtggcatgctccgtcaccttttt 4848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 7e-25; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 300
Target Start/End: Complemental strand, 29185033 - 29184873
Alignment:
Q  141 aataggtcttta-tccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaa 239  Q
    |||||| ||||| |||||||||||||||||||||||||||||| | |||||           ||| |||| | |||||||||||       |||||||||    
T  29185033 aataggcctttactccctgtaatataggtcacttttggttttgcctcctgtaaaaaaaaaaatttggattcgatccttgtaaaatttttttgttttggaa 29184934  T
Q  240 aacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||| || || ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29184933 aacccccctagaccagctgactgtgcatttttgctgatgtggcatgttgcgtcaccttttt 29184873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 18141034 - 18141106
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  18141034 gttttggaaaacccccctagaccagctgactgtgcatttttgctgatgtggcatgctgcatcaccctttttgg 18141106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 303
Target Start/End: Complemental strand, 31173636 - 31173475
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaa 240  Q
    |||||||||||| ||||||||||||| ||||||||||||||| |||||             ||| ||||  ||||||||||||       ||||||||||    
T  31173636 aataggtctttacccctgtaatatagatcacttttggttttgcccccttgtaattttttttttttgattcagtccttgtaaaatttttttgttttggaaa 31173537  T
Q  241 acccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||| || || ||||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  31173536 acccc-ctagaccagctgactgtgcatttttgcagatgtggcatgctgcgtcaccttttttgg 31173475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 303
Target Start/End: Complemental strand, 54567795 - 54567634
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaa 239  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||| |           ||| |||| |||||||||||||       |||||||||    
T  54567795 aataggtctttaccccctgtaatataggtcacttttggttttgccccctataaaaaaaaaa-tttggattcggtccttgtaaaatttttttgttttggaa 54567697  T
Q  240 aacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||||| || || ||||||||||||||||||||||||||||||||| || |||||| |||||||    
T  54567696 aacccc-ctagaccagctgactgtgcatttttgctgatgtggcatgctgtgtcaccttttttgg 54567634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 303
Target Start/End: Original strand, 48044388 - 48044438
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48044388 cagctgactgtgcatttttgctgatgtggcatgttgcgtcaccttttttgg 48044438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 18142235 - 18142094
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    ||||||||||||||||||||||||||||| |||||||            || |||| ||||||||||||        ||||||||||||||| || || |    
T  18142235 ccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaaaattggattaggtccttgtaaattttttttgttttggaaaacccccctagacc 18142136  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcacc 295  Q
    |||||| ||||||||||||||||||||||||| | |||||||    
T  18142135 agctgattgtgcatttttgctgatgtggcatgctacgtcacc 18142094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 29183828 - 29183899
Alignment:
Q  232 ttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||||||||||||| || || ||||||||||||||||||||||||| || ||||||| |||| |||||||||    
T  29183828 ttttggaaaacccccctagaccagctgactgtgcatttttgctgatatgacatgttgtgtcagcctttttgg 29183899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 38344342 - 38344273
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||  || || |||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  38344342 gttttggaaaaccctcctagaccagctgactgtgcatttttgctgatgtgacatgctgcgtcaccttttt 38344273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 43112122 - 43112191
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||||||||| || ||||||| ||| ||||||||||||||||||||| ||| ||||| ||||    
T  43112122 gttttggaaaacccctctagaccagctgattgtacatttttgctgatgtggcatgctgcatcaccttttt 43112191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 4217773 - 4217844
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||||||||||||||| | || ||||| ||||||||||||||||||||||||||| ||||||||  |||||||    
T  4217773 gttttggaaaacccct-tagaccagctaactgtgcatttttgctgatgtggcatgctgcgtcactttttttgg 4217844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 54566524 - 54566566
Alignment:
Q  148 ctttatccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  54566524 ctttacccctgtaatataggtcacttttggttttgtcccctgt 54566566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 43113000 - 43112928
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||||| |||||||| ||  | ||||||||| |||||||||| |||||||||||| ||||||||| |||||||    
T  43113000 gttttgaaaaacccccctaaaccagctgactatgcatttttgttgatgtggcatgctgcgtcaccttttttgg 43112928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 54566606 - 54566678
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||| || || ||||| ||| |||||||||||| |||||||||| || |||||| |||||||    
T  54566606 gttttggaaaacccccctagaccagctaactatgcatttttgctaatgtggcatgatgtgtcaccttttttgg 54566678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 48076442 - 48076481
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcac 294  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  48076442 gctgactgtgcatttttgctgatgtggcatgatgcgtcac 48076481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 10615273 - 10615330
Alignment:
Q  134 tttggtcaataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||| |||||||||||| ||| ||||||||||| |||||||||||||| |||||||    
T  10615273 tttggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgt 10615330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 294
Target Start/End: Original strand, 34061463 - 34061504
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggcatgttgcgtcac 294  Q
    ||||||||||||||||||||||||||||||||| ||| ||||    
T  34061463 cagctgactgtgcatttttgctgatgtggcatgctgcatcac 34061504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 38243641 - 38243596
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||||    
T  38243641 gctgactgtgcatttttgcttatgtggcatgatgcgtcaccttttt 38243596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 24909477 - 24909528
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggca 283  Q
    ||||||||||||||| || || ||||||||| |||||||||||||||||||||    
T  24909477 gttttggaaaacccc-ctagaccagctgactatgcatttttgctgatgtggca 24909528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 300
Target Start/End: Complemental strand, 51545146 - 51545099
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||| |||||||| |||||||||||||||||||| ||| ||||    
T  51545146 cagctgactatgcattttcgctgatgtggcatgttgcgttaccttttt 51545099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 37977558 - 37977508
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||| ||||||||||| |||||||||||||| |||||||    
T  37977558 aataggtctttaccccctgtaatataggacacttttggttttgccccctgt 37977508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 46610014 - 46610064
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||| ||||||||||| |||||||||||||| |||||||    
T  46610014 aataggtctttaccccctgtaatatagggcacttttggttttgccccctgt 46610064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 280
Target Start/End: Complemental strand, 4218828 - 4218779
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtg 280  Q
    ||||||||||||||| ||  | ||||||||||| ||||||||||||||||    
T  4218828 gttttggaaaacccccctaaaccagctgactgtacatttttgctgatgtg 4218779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 11359553 - 11359621
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||| |||||||| || | ||||||||||||||||||| |||||||||||| | || |||||| ||||    
T  11359553 gttttgaaaaacccc-ctagctcagctgactgtgcattttcgctgatgtggcacgctgagtcaccgtttt 11359621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 24528393 - 24528442
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||| ||||| ||||||||||||| | | |||||||||||||||||||    
T  24528393 aatagggctttacccctgtaatatagattatttttggttttgtcccctgt 24528442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 280
Target Start/End: Original strand, 38343280 - 38343328
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtg 280  Q
    |||||||||||||||  | || ||||||||||||||||||||||||||||    
T  38343280 gttttggaaaacccca-tagaccagctgactgtgcatttttgctgatgtg 38343328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 45291539 - 45291584
Alignment:
Q  256 ctgactgtgcatttttgctgatgtggcatgttgcgtcacccttttt 301  Q
    ||||||||||||||| ||| ||||| |||||||||||||| |||||    
T  45291539 ctgactgtgcattttcgctaatgtgacatgttgcgtcacctttttt 45291584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 49263149 - 49263194
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||||| ||||||||||||| || |||||| ||||    
T  49263149 gctgactgtgcatttttcctgatgtggcatgctgtgtcaccttttt 49263194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 4218900 - 4218868
Alignment:
Q  158 gtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||||||||||||| |||||||    
T  4218900 gtaatataggtcacttttggttttgccccctgt 4218868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 10616811 - 10616775
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  10616811 ccctgtaatatagggcacttttggttttgccccctgt 10616775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 182
Target Start/End: Original strand, 12210047 - 12210075
Alignment:
Q  154 ccctgtaatataggtcacttttggttttg 182  Q
    |||||||||||||||||||||||||||||    
T  12210047 ccctgtaatataggtcacttttggttttg 12210075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 14824770 - 14824806
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  14824770 ccctgtaatataggtcacttttgattttgccccctgt 14824806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 15086242 - 15086278
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  15086242 ccctgtaatatagggcacttttggttttgccccctgt 15086278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 182
Target Start/End: Original strand, 18140959 - 18140987
Alignment:
Q  154 ccctgtaatataggtcacttttggttttg 182  Q
    |||||||||||||||||||||||||||||    
T  18140959 ccctgtaatataggtcacttttggttttg 18140987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 29313787 - 29313843
Alignment:
Q  135 ttggtcaataggtctttatc-cctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||| |||||||||||| | |||||||||||||||| ||| |||||| ||||||||    
T  29313787 ttggttaataggtctttacctcctgtaatataggtcattttcggttttctcccctgt 29313843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 34062273 - 34062233
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcacc 295  Q
    ||||||||||||||||||||||||||| | |||| ||||||    
T  34062273 gctgactgtgcatttttgctgatgtggtaagttgtgtcacc 34062233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 34062376 - 34062340
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||||||||||||||||  |||||||    
T  34062376 ccctgtaatataggtcacttttggtttttccccctgt 34062340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 182
Target Start/End: Original strand, 45291439 - 45291467
Alignment:
Q  154 ccctgtaatataggtcacttttggttttg 182  Q
    |||||||||||||||||||||||||||||    
T  45291439 ccctgtaatataggtcacttttggttttg 45291467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 46207927 - 46207875
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggca 283  Q
    ||||||||||||||| || |  |||||||||||||||||| ||| ||||||||    
T  46207927 gttttggaaaacccccctagggcagctgactgtgcattttcgctaatgtggca 46207875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 48044715 - 48044650
Alignment:
Q  205 agatttggtccttgtaaaannnnnnngttttggaaaacccctctggatcagctgactgtgcatttt 270  Q
    |||||| ||||||||||||       |||||||||||||||||| || ||||||||||||| ||||    
T  48044715 agatttcgtccttgtaaaaattttttgttttggaaaacccctctagaccagctgactgtgcctttt 48044650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 49265229 - 49265201
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggca 283  Q
    |||||||||||||||||||||||||||||    
T  49265229 gctgactgtgcatttttgctgatgtggca 49265201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 300
Target Start/End: Original strand, 34901521 - 34901667
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    ||||||||||||||||||||||||||||| |||||||           ||| |||| ||||||||||||        ||||||||||||||| || || |    
T  34901521 ccctgtaatataggtcacttttggttttgccccctgtaaaaatatttttttggattcggtccttgtaaattttttttgttttggaaaacccccctagacc 34901620  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||    
T  34901621 agctgactgtgcatttttgctgatgtggcatgctgcgtcaccttttt 34901667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 2269047 - 2269208
Alignment:
Q  141 aataggtcttta--tccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttgga 238  Q
    ||||||||||||  ||| |||||||||||||||||||||||||| || | ||           ||| ||||||||||||||||||       ||||||||    
T  2269047 aataggtctttacctccttgtaatataggtcacttttggttttgccctcagtaaatttttttttttggatttggtccttgtaaaatttttttgttttgga 2269146  T
Q  239 aaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||| || || |||||||||||||||||||| |||||||||||||| ||| |||||| ||||    
T  2269147 aaactcccctagatcagctgactgtgcatttatgctgatgtggcattttgtgtcaccttttt 2269208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 303
Target Start/End: Complemental strand, 34902775 - 34902626
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    ||||||||||||||| ||||||||||||  |||||||           ||| |||| |||||||||||||       ||||||| ||||||| || || |    
T  34902775 ccctgtaatataggttacttttggttttcccccctgtaattttttttttttggattcggtccttgtaaaatttttttgttttggcaaacccccctagacc 34902676  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    | |||||||||||||||||||||||||||||||||||||||  |||||||    
T  34902675 aactgactgtgcatttttgctgatgtggcatgttgcgtcactttttttgg 34902626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 39515080 - 39515018
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtca 293  Q
    ||||||||||||||  || || ||||||||||||||||||||||||||||||||| |||||||    
T  39515080 gttttggaaaaccctcctagaccagctgactgtgcatttttgctgatgtggcatgctgcgtca 39515018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 31986191 - 31986122
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| || ||  |||||||||||||||||||||||||||||||| | ||||||| ||||    
T  31986191 gttttggaaaacccccctagactagctgactgtgcatttttgctgatgtggcatgctccgtcaccttttt 31986122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 35322431 - 35322359
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||||||||||||||  | || ||||||||||||| ||||||||||||||||||| ||| ||||| |||||||    
T  35322431 gttttggaaaacccccatagaccagctgactgtgcttttttgctgatgtggcatgatgcctcaccttttttgg 35322359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 303
Target Start/End: Original strand, 39513886 - 39514032
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    ||||||||||||||||||||||||||||| |||||||            || |||| |||||||||||||       ||||||||||||||| || || |    
T  39513886 ccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaa--ttggattcggtccttgtaaaatatttttgttttggaaaacccc-ctagacc 39513982  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||| ||||| | ||||||||||||||||||| ||||||||| |||||||    
T  39513983 agcttactgtacttttttgctgatgtggcatgctgcgtcaccttttttgg 39514032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 2270250 - 2270197
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatg 285  Q
    ||||||||||||||| || || |||||||||||||||||||||||||||||||||    
T  2270250 gttttggaaaacccc-ctagaccagctgactgtgcatttttgctgatgtggcatg 2270197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 37402581 - 37402650
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| || | ||||||||||||||||||| |||||||||||| | || |||||| ||||    
T  37402581 gttttggaaaacccccctaggtcagctgactgtgcattttcgctgatgtggcacgctgagtcaccatttt 37402650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 39808654 - 39808703
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||||    
T  39808654 aataggtctttacccctgtaatatagggcacttttggttttgccccctgt 39808703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 285
Target Start/End: Original strand, 31985016 - 31985163
Alignment:
Q  141 aataggtcttta--tccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnnttta-gatttggtccttgtaaaannnnnnngttttgg 237  Q
    ||||||||||||  |||||||||||||||||||||||||||||| ||||| |           |||  |||| |||||||||||||       |||||||    
T  31985016 aataggtctttacctccctgtaatataggtcacttttggttttgccccctataatttttattttttttgattcggtccttgtaaaatgtttttgttttgg 31985115  T
Q  238 aaaacccctctggatcagctgactgtgcatttttgctgatgtggcatg 285  Q
    |||||||| ||  |  ||||||||||||||||||| ||||||||||||    
T  31985116 aaaacccccctaaacaagctgactgtgcatttttgttgatgtggcatg 31985163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 39451624 - 39451669
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||||    
T  39451624 gctgactgtgcatttttgcttatgtggcatgatgcgtcaccttttt 39451669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 9768342 - 9768306
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||||||||||| |||||||||||||    
T  9768342 ccctgtaatataggtcacttttgattttgtcccctgt 9768306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 34504128 - 34504080
Alignment:
Q  247 ctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcacc 295  Q
    |||| ||||||||||||||||||  ||||||||||||||||| ||||||    
T  34504128 ctgggtcagctgactgtgcatttccgctgatgtggcatgttgtgtcacc 34504080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 6820043 - 6819980
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcac 294  Q
    |||||| |||||||| || |  |||||||||||||||||| |||||||||||||| || |||||    
T  6820043 gttttgaaaaacccccctagcccagctgactgtgcattttcgctgatgtggcatgctgagtcac 6819980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 2270343 - 2270293
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||| |||| ||||||||||||||||||||| |||||||    
T  2270343 aataggtctttaccccctgtattataggtcacttttggttttgccccctgt 2270293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 27164710 - 27164660
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||| ||||||||||| |||||||||||||| |||||||    
T  27164710 aataggtctttaccccctgtaatatagggcacttttggttttgccccctgt 27164660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 295
Target Start/End: Complemental strand, 34375067 - 34375033
Alignment:
Q  261 tgtgcatttttgctgatgtggcatgttgcgtcacc 295  Q
    |||||||||||||||||||||||||||| ||||||    
T  34375067 tgtgcatttttgctgatgtggcatgttgtgtcacc 34375033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 4105331 - 4105282
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||||||||||||||||| |||| ||||| ||| ||||    
T  4105331 aataggtctttacccctgtaatataggtcattttttgttttctcctctgt 4105282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 26447634 - 26447589
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggttttgtccc 186  Q
    |||||||||||| ||||||||||||||||| ||||| |||| ||||    
T  26447634 aataggtctttacccctgtaatataggtcatttttgattttttccc 26447589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 27407492 - 27407521
Alignment:
Q  256 ctgactgtgcatttttgctgatgtggcatg 285  Q
    ||||||||||||||||||||||||||||||    
T  27407492 ctgactgtgcatttttgctgatgtggcatg 27407521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 6819292 - 6819344
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggca 283  Q
    |||||| |||||||| || |  |||||||||||||||||| ||||||||||||    
T  6819292 gttttgaaaaacccccctagcccagctgactgtgcattttcgctgatgtggca 6819344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 27163136 - 27163172
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  27163136 ccctgtaatatagggcacttttggttttggcccctgt 27163172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 34374234 - 34374274
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggtttt 181  Q
    |||||||||||| ||||||||||||||||| ||||| ||||    
T  34374234 aataggtctttacccctgtaatataggtcaattttgatttt 34374274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 34504227 - 34504188
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggtttt 181  Q
    |||||||||||| |||||||||||| |||||||||||||||    
T  34504227 aataggtcttta-ccctgtaatatatgtcacttttggtttt 34504188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 35322502 - 35322466
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  35322502 ccctgtaatatagatcacttttggttttgtccactgt 35322466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 37125355 - 37125291
Alignment:
Q  238 aaaacccctctggatc-agctgactgtgcatttttgctgatgtggcatgttgcgtcacccttttt 301  Q
    |||||||||||||  | ||||||||||||||||  |||||||||||| | ||||||||| |||||    
T  37125355 aaaacccctctggcgctagctgactgtgcatttacgctgatgtggcacgctgcgtcacctttttt 37125291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 37403420 - 37403368
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggca 283  Q
    ||||||||||||||| || |  ||||||||||||||||||  |||||||||||    
T  37403420 gttttggaaaacccccctaggccagctgactgtgcattttcactgatgtggca 37403368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 38500565 - 38500525
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggtttt 181  Q
    |||||||||||| ||||||||||||||||| ||| ||||||    
T  38500565 aataggtctttacccctgtaatataggtcattttcggtttt 38500525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 39452389 - 39452353
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  39452389 ccctgtaatataagtcacttttggttttttcccctgt 39452353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 39515174 - 39515134
Alignment:
Q  141 aataggtcttta-tccctgtaatataggtcacttttggttt 180  Q
    |||||| ||||| ||||||||||||||||||||||||||||    
T  39515174 aataggcctttactccctgtaatataggtcacttttggttt 39515134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 39810124 - 39810088
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  39810124 ccctgtaatatagggcacttttggttttgccccctgt 39810088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 40652705 - 40652665
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggtttt 181  Q
    |||||||||||| ||||||||||||||||| || |||||||    
T  40652705 aataggtctttacccctgtaatataggtcatttctggtttt 40652665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 40702048 - 40702012
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||||||||||| |||||| |||||||    
T  40702048 ccctgtaatataggtcacttttcgttttgccccctgt 40702012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 42348981 - 42349017
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  42348981 ccctgtaatatagggcacttttggttttgccccctgt 42349017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 47145246 - 47145318
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47145246 gttttggaaaaccccgctagaccagctgactgtgcatttttgctgatgtggcatgttgcgtcaccttttttgg 47145318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 24545553 - 24545625
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||||| |||||||| || || ||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  24545553 gttttgaaaaacccccctagaccagctgactgtgcatttttgctgatgtggcatgctgcgtcaccttttttgg 24545625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 24546592 - 24546523
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||| ||| || || ||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  24546592 gttttggaaaaaccccctagaccagctgactgtgcatttttgctgatgtggcatgttgcatcaccttttt 24546523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 13903363 - 13903296
Alignment:
Q  232 ttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13903363 ttttggaaaaccccccaggc-cagctgactgtgcatttttgctgatgtggcatgttgcgtcaccttttt 13903296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 31645330 - 31645401
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||| || || |||||||||||||||||||||||||||| |||| ||||||||| |||||||    
T  31645330 gttttggaaaacccc-ctagaccagctgactgtgcatttttgctgatgtgacatgctgcgtcaccttttttgg 31645401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 48716418 - 48716482
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcacc 295  Q
    |||||| |||||||| || || ||||||||| |||||||||||||||||||||||||||||||||    
T  48716418 gttttgaaaaacccccctagaccagctgactatgcatttttgctgatgtggcatgttgcgtcacc 48716482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 1826472 - 1826331
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    ||||||||||||||||||||||| ||||| |||||||           ||| |||  |||||||||||||       |||||||||||||||  | || |    
T  1826472 ccctgtaatataggtcacttttgattttgccccctgtaaattttttttttttgatccggtccttgtaaaaaaattttgttttggaaaacccccttagacc 1826373  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcacc 295  Q
    || |||||||||||||||||||||||||||||||| ||||||    
T  1826372 agttgactgtgcatttttgctgatgtggcatgttgtgtcacc 1826331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 141 - 285
Target Start/End: Original strand, 26095819 - 26095964
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaa 239  Q
    |||||||||||| ||| ||||||||||||||||| |||||||| |||||||           ||| |||| |||||||||||||       |||||| ||    
T  26095819 aataggtctttaccccctgtaatataggtcacttatggttttgccccctgtaaaaaaaaattttttgattcggtccttgtaaaatttttttgttttgaaa 26095918  T
Q  240 aacccctctggatcagctgactgtgcatttttgctgatgtggcatg 285  Q
     ||||| || || |||||||||||||||||||||||||||||||||    
T  26095919 tacccccctagaccagctgactgtgcatttttgctgatgtggcatg 26095964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 4414008 - 4414076
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| || |  |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  4414008 gttttggaaaacccc-ctaggccagctgactgtgcatttttgctaatgtggcatgttgcgtcaccttttt 4414076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 282
Target Start/End: Complemental strand, 26096990 - 26096939
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggc 282  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||||    
T  26096990 gttttggaaaacccccctagaccagctgactgtgcatttttgctgatgtggc 26096939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 285
Target Start/End: Original strand, 1825299 - 1825441
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaa 239  Q
    |||||||||||| ||| |||||||||||||||||||||||||| |||||||           |||  ||| |||||||||||||       |||||||||    
T  1825299 aataggtctttaccccctgtaatataggtcacttttggttttgccccctgt---aaatattttttttattcggtccttgtaaaaaaaatttgttttggaa 1825395  T
Q  240 aacccctctggatcagctgactgtgcatttttgctgatgtggcatg 285  Q
    |||||| || || ||| ||| |||||||||||||||||||||||||    
T  1825396 aacccccctagaccagttgagtgtgcatttttgctgatgtggcatg 1825441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 31648548 - 31648494
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatg 285  Q
    ||||||||||||||| ||  | |||||||||||||||||||||||||||||||||    
T  31648548 gttttggaaaacccccctaaaccagctgactgtgcatttttgctgatgtggcatg 31648494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 32131868 - 32131818
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  32131868 cagctgactgtgcatttttgctgatttggcatgctgcgtcaccttttttgg 32131818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 32130740 - 32130809
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||| ||  | || |||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  32130740 gttttggaaaacacccgtagaccagctgactgtgcatttttgctgatgtgacatgttgtgtcaccttttt 32130809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 31648171 - 31648243
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||| | || || ||||||||||||||||||| |||||||| |||| || |||||| |||||||    
T  31648171 gttttggaaaaccgccctagaccagctgactgtgcatttttactgatgtgacatgatgtgtcaccttttttgg 31648243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 47146326 - 47146286
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggcatgttgcgtca 293  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  47146326 cagctgactgtgcatttttgctgatgtgacatgttgcgtca 47146286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 300
Target Start/End: Original strand, 14978426 - 14978473
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| ||||    
T  14978426 cagctgactatgcatttttgctgatgtggcatgttacgtcaccttttt 14978473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 35978816 - 35978879
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcac 294  Q
    ||||||||||||||| || | |||||||||||||||||||||  ||||||||||| || |||||    
T  35978816 gttttggaaaacccccctaggtcagctgactgtgcatttttgtagatgtggcatgctgtgtcac 35978879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 4415113 - 4415063
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||||||||||||||||||||||||||| ||||||| || ||| |||||||    
T  4415113 cagctgactgtgcatttttgctgatgtgacatgttgtgttaccttttttgg 4415063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 22591400 - 22591445
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||||    
T  22591400 gctgactgtgcatttttgctaatgtggcatgatgcgtcaccttttt 22591445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 28414858 - 28414903
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||||||||||||||||||| || |||||| ||||    
T  28414858 gctgactgtgcatttttgctgatgtggcatgctgtgtcaccttttt 28414903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 33645926 - 33645857
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||||| ||| || ||||||||| || |||||| ||||||||||||| || |||||| ||||    
T  33645926 gttttggaaaacccttctagaccagctgactatgtatttttactgatgtggcatgctgggtcaccttttt 33645857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 45832158 - 45832207
Alignment:
Q  132 aatttggtcaataggtctttatccctgtaatataggtcacttttggtttt 181  Q
    |||| ||| ||||||| |||||||||||||||||| ||||||||||||||    
T  45832158 aattgggttaataggtatttatccctgtaatatagatcacttttggtttt 45832207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 49201345 - 49201276
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| || |  |||||||||||||||||| |||||||||||| | || |||||| ||||    
T  49201345 gttttggaaaacccccctaggccagctgactgtgcattttcgctgatgtggcacgctgagtcaccgtttt 49201276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 20132453 - 20132541
Alignment:
Q  206 gatttggtccttgtaaaannnnnnngttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcacc 295  Q
    ||||||||||||||||||       ||||||||||||||| || |  |||||| |  ||||||||||||||||||||||| |||||||||    
T  20132453 gatttggtccttgtaaaatttgtttgttttggaaaacccc-ctaggccagctggcaatgcatttttgctgatgtggcatgctgcgtcacc 20132541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 33667670 - 33667634
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||||||||||||||||| |||||||    
T  33667670 ccctgtaatataggtcacttttggttttgccccctgt 33667634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 44753394 - 44753446
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggca 283  Q
    ||||||||||||||| || |  |||||||||||||||||| ||||||||||||    
T  44753394 gttttggaaaacccccctaggccagctgactgtgcattttcgctgatgtggca 44753446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 13902157 - 13902219
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcac 294  Q
    ||||||||||||||| || || ||||||||||||||| |||| |||||||||||| || |||||    
T  13902157 gttttggaaaacccc-ctagaccagctgactgtgcatctttgttgatgtggcatgctgtgtcac 13902219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 31837799 - 31837857
Alignment:
Q  232 ttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgt 291  Q
    ||||| |||||||| || ||||||||||||||| |||||| ||||||||||||| |||||    
T  31837799 ttttgaaaaacccc-ctagatcagctgactgtgtatttttactgatgtggcatgctgcgt 31837857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 282
Target Start/End: Complemental strand, 33667584 - 33667533
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggc 282  Q
    |||||||||||||||  | || ||| ||||||||||||||||||||||||||    
T  33667584 gttttggaaaacccccttagaccagttgactgtgcatttttgctgatgtggc 33667533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 300
Target Start/End: Complemental strand, 51471120 - 51471073
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||| ||||||||||||||||||||||| || |||||| ||||    
T  51471120 cagctgactctgcatttttgctgatgtggcatgctgtgtcaccttttt 51471073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 190
Target Start/End: Complemental strand, 7780265 - 7780223
Alignment:
Q  148 ctttatccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||| ||||||||||||| ||||||||||||||| |||||||    
T  7780265 ctttacccctgtaatatagatcacttttggttttgccccctgt 7780223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 14625375 - 14625425
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||| ||||||||||| |||||||||||||| |||||||    
T  14625375 aataggtctttaccccctgtaatataggacacttttggttttgccccctgt 14625425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 26097079 - 26097029
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||| |||||||||||||||||||||||||| | |||||    
T  26097079 aataggtctttaccccctgtaatataggtcacttttggttttgcctcctgt 26097029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 24962783 - 24962828
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||||||||||| |||||||||| ||| ||||| ||||    
T  24962783 gctgactgtgcatttttgctcatgtggcatgatgcatcaccttttt 24962828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 25601878 - 25601809
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| || |  |||||||||| ||||||| |||||||||||| | || |||||| ||||    
T  25601878 gttttggaaaacccccctaggccagctgactgggcattttcgctgatgtggcacgctgagtcaccatttt 25601809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 31648098 - 31648131
Alignment:
Q  157 tgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||||||||||||| ||||||||    
T  31648098 tgtaatataggtcacttttggttttatcccctgt 31648131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 45833114 - 45833069
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||  ||||||||||||||||||||||||| |||||| ||||    
T  45833114 gctgactaggcatttttgctgatgtggcatgttgtgtcaccttttt 45833069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 48717254 - 48717205
Alignment:
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||||||||| ||||||||||||||||||||| || |||||  |||||||    
T  48717254 agctgactgtacatttttgctgatgtggcatgatgtgtcacattttttgg 48717205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 12277491 - 12277455
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  12277491 ccctgtaatataggtcatttttggttttctcccctgt 12277455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 182
Target Start/End: Complemental strand, 13903409 - 13903381
Alignment:
Q  154 ccctgtaatataggtcacttttggttttg 182  Q
    |||||||||||||||||||||||||||||    
T  13903409 ccctgtaatataggtcacttttggttttg 13903381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 13917308 - 13917272
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  13917308 ccctgtaatataggacacttttggttttctcccctgt 13917272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 16785741 - 16785777
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  16785741 ccctgtaatgtaggtcacttttggttttgccccctgt 16785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 182
Target Start/End: Original strand, 20132401 - 20132429
Alignment:
Q  154 ccctgtaatataggtcacttttggttttg 182  Q
    |||||||||||||||||||||||||||||    
T  20132401 ccctgtaatataggtcacttttggttttg 20132429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 22592269 - 22592229
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcacc 295  Q
    ||||||| |||||||||||| ||||||||||||| ||||||    
T  22592269 gctgactatgcatttttgcttatgtggcatgttgtgtcacc 22592229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 24730241 - 24730205
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||||||||||||||||  |||||||    
T  24730241 ccctgtaatataggtcacttttggttttcccccctgt 24730205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 31648624 - 31648588
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||| | |||||||||||||||||||    
T  31648624 ccctgtaatataggttatttttggttttgtcccctgt 31648588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 33934657 - 33934693
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  33934657 ccctgtaatatagatcacttttggttttgccccctgt 33934693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 35979543 - 35979492
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggca 283  Q
    ||||||| ||||||| || || ||||||||||||||||||||||||| |||||    
T  35979543 gttttggcaaacccc-ctagaccagctgactgtgcatttttgctgatttggca 35979492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 43635840 - 43635888
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccct 188  Q
    |||||||||||| ||| ||||||||||| |||||||||||||| |||||    
T  43635840 aataggtctttaccccctgtaatatagggcacttttggttttgccccct 43635888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 47146421 - 47146378
Alignment:
Q  141 aataggtctttatccc--tgtaatataggtcacttttggttttg 182  Q
    |||||||||||| |||  ||||||||||||||||||||||||||    
T  47146421 aataggtctttacccccttgtaatataggtcacttttggttttg 47146378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 47221904 - 47221836
Alignment:
Q  232 ttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||| ||||    ||||||||||||||||||||||||||| ||| | || |||||| ||||    
T  47221904 ttttggaaaaccgctctaagccagctgactgtgcatttttgctgatgtagcacgctgggtcaccgtttt 47221836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 52084863 - 52084827
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||  ||||||||||||||||||||||    
T  52084863 ccctgtaatatagagcacttttggttttgtcccctgt 52084827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 154 - 303
Target Start/End: Original strand, 1589405 - 1589554
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    ||||||||||||||||||||||||||||| |||||||           ||| |||| | |||||||||||       ||||||||||||||| ||  | |    
T  1589405 ccctgtaatataggtcacttttggttttgccccctgtaaaattttttttttcgattcgatccttgtaaaatttgtttgttttggaaaacccccctaaacc 1589504  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  1589505 agctgactgtgcatttttgctgatgtggcatgctgcgtcatcctttttgg 1589554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 5218998 - 5218929
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  5218998 gttttggaaaacccccctagaccagctgactgtgcatttttgctgatgtggcatgttgcatcaccttttt 5218929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 5217862 - 5217934
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  5217862 gttttggaaaacccccctagaccagctgactgtgcatttttgctgatgtggcatgttggatcagcctttttgg 5217934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 27159347 - 27159275
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||| |||||| ||  |||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  27159347 gttttggaaaatccctctagactagctgactgtgcatttttgctgatgtggcatgctgcgtcaccttttttgg 27159275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 24757951 - 24757882
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| || || ||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  24757951 gttttggaaaacccccctagaccagctgactgtgcgtttttgctgatgtggcatgctgcgtcaccttttt 24757882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 45865614 - 45865545
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||| ||| || || ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  45865614 gttttggaaaaaccccctagaccagctgactgtgcatttttgctgatgtggcatgatgcgtcaccttttt 45865545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 3766678 - 3766609
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||||| |||    |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  3766678 gttttggaaaacccatctacgccagctgactgtgcatttttgctgatgtggcatgttgtgtcaccttttt 3766609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 284
Target Start/End: Complemental strand, 1594176 - 1594032
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaa 239  Q
    |||||||||||| ||| |||||||||||||||||||||||||| | ||||            ||| |||| ||||||||||||        |||||||||    
T  1594176 aataggtctttaccccctgtaatataggtcacttttggttttgcctcctgcaaaaaaaaaaatttggattcggtccttgtaaattttttttgttttggaa 1594077  T
Q  240 aacccctctggatcagctgactgtgcatttttgctgatgtggcat 284  Q
    |||||| || || ||||||||||||||||||||||||| ||||||    
T  1594076 aacccccctagaccagctgactgtgcatttttgctgatatggcat 1594032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 45864525 - 45864589
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcacc 295  Q
    ||||||||||| ||| || || ||||||||||||||||||||| ||||||||||| ||| |||||    
T  45864525 gttttggaaaaaccccctagaccagctgactgtgcatttttgcagatgtggcatgctgcatcacc 45864589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 16902388 - 16902340
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  16902388 aataggtctttacccctgtaatataggtcatttttggtttt-tcccctgt 16902340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 48104514 - 48104563
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||||||||||||||||| |||| ||||| ||||||||    
T  48104514 aataggtctttacccctgtaatataggtcattttttgttttctcccctgt 48104563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 280
Target Start/End: Original strand, 48945280 - 48945329
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtg 280  Q
    |||||| |||||||||||  | ||||||||||||||||||||||||||||    
T  48945280 gttttgaaaaacccctctataccagctgactgtgcatttttgctgatgtg 48945329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 295
Target Start/End: Complemental strand, 21237286 - 21237247
Alignment:
Q  256 ctgactgtgcatttttgctgatgtggcatgttgcgtcacc 295  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  21237286 ctgactgtgcatttttgctgatgtggcatgctgtgtcacc 21237247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 48168855 - 48168905
Alignment:
Q  141 aataggtctttatcc-ctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| || |||||||||||| |||||||||||||| |||||||    
T  48168855 aataggtctttaccctctgtaatatagggcacttttggttttgccccctgt 48168905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 48896484 - 48896526
Alignment:
Q  141 aataggtctttatc-cctgtaatataggtcacttttggttttg 182  Q
    |||||||||||| | ||||||||||||||||||||||||||||    
T  48896484 aataggtctttacctcctgtaatataggtcacttttggttttg 48896526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 21298297 - 21298256
Alignment:
Q  141 aataggtctttatccct-gtaatataggtcacttttggtttt 181  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  21298297 aataggtctttatcccttgtaatataggtcatttttggtttt 21298256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 38092132 - 38092185
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcat 284  Q
    ||||||||||||||| || | |||| ||| ||||||||||| ||||||||||||    
T  38092132 gttttggaaaaccccgctaggtcagttgattgtgcatttttactgatgtggcat 38092185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 5219074 - 5219038
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  5219074 ccctgtaatataggtcacttttgattttgccccctgt 5219038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 9351609 - 9351569
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggcatgttgcgtca 293  Q
    |||||||||||||||||| |||||||||||| |||| ||||    
T  9351609 cagctgactgtgcattttcgctgatgtggcacgttgagtca 9351569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 17763341 - 17763392
Alignment:
Q  141 aataggtctttatccct--gtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||||  |||||||||| |||||||||||||| |||||||    
T  17763341 aataggtctttacccctctgtaatataggacacttttggttttgccccctgt 17763392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 44414129 - 44414089
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggtttt 181  Q
    |||||||||||| ||||||||||||||||| || |||||||    
T  44414129 aataggtctttacccctgtaatataggtcatttatggtttt 44414089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 45865689 - 45865653
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||||||||||||||||  |||||||    
T  45865689 ccctgtaatataggtcacttttggttttaccccctgt 45865653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 154 - 303
Target Start/End: Original strand, 15747770 - 15747918
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    |||||||||||||||||||||||||||||| ||||||           |||  ||| |||||||||||||       ||||||||||||||| || ||      
T  15747770 ccctgtaatataggtcacttttggttttgttccctgtaaaaacaaatttttcaattcggtccttgtaaaatttttttgttttggaaaacccc-ctagact 15747868  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15747869 agctgactgtgcatttttgctgatgtggcatgttgtgtcaccctttttgg 15747918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 303
Target Start/End: Original strand, 44241102 - 44241264
Alignment:
Q  141 aataggtcttta-tccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaa 239  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||||           ||||||||||||||||||||||       |||||||||    
T  44241102 aataggactttactccctgtaatataggtcatttttggttttgtcccctgtaaaaaaaaaattttagatttggtccttgtaaaaaaattttgttttggaa 44241201  T
Q  240 aacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||||| ||  | |||||||||||| | |||||||||||||||||| | |||| || |||||||    
T  44241202 aacccccctaaaccagctgactgtgta-ttttgctgatgtggcatgctccgtctccttttttgg 44241264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 303
Target Start/End: Complemental strand, 22468262 - 22468116
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    ||||||||||||||||||||||||||||| |||||||            || |||| |||||||||||||       ||||||||||||||| || || |    
T  22468262 ccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaa--ttggattaggtccttgtaaaacttttttgttttggaaaacccc-ctagacc 22468166  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  22468165 agcagactgtgcatttttgctgatgtggcatgctgcgtcaccttttttgg 22468116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 303
Target Start/End: Complemental strand, 22474483 - 22474337
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnntttagatttggtccttgtaaaannnnnnngttttggaaaacccctctggatc 253  Q
    ||||||||||||||||||||||||||||| |||||||            || |||| |||||||||||||       ||||||||||||||| || || |    
T  22474483 ccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaa--ttggattaggtccttgtaaaacttttttgttttggaaaacccc-ctagacc 22474387  T
Q  254 agctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  22474386 agcagactgtgcatttttgctgatgtggcatgctgcgtcaccttttttgg 22474337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 303
Target Start/End: Original strand, 22466981 - 22467151
Alignment:
Q  136 tggtcaataggtctttatccc--tgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnn-tttagatttggtccttgtaaaannnnnnngt 232  Q
    |||| |||||||||||| |||  ||||||||||||||||||||||||||||||||||            ||| ||||   |||||||||||       ||    
T  22466981 tggttaataggtctttacccccctgtaatataggtcacttttggttttgtcccctgtaaaaaaaaaaaatttggattcaatccttgtaaaaaaaatttgt 22467080  T
Q  233 tttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||||||||||||  | || ||||||||||||||||||||||||||||||||| || |||||| |||||||    
T  22467081 tttggaaaacccccttagaccagctgactgtgcatttttgctgatgtggcatgctgtgtcaccttttttgg 22467151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 11830018 - 11829972
Alignment:
Q  257 tgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  11830018 tgactgtgcatttttgctgatgtggcatgttgcgtcaccttttttgg 11829972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 28461160 - 28461231
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    |||||||||||||||  | || || ||||||||||||||||||||||||||||||||| |||||| |||||||    
T  28461160 gttttggaaaaccccg-tagaccacctgactgtgcatttttgctgatgtggcatgttgtgtcaccttttttgg 28461231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 44242317 - 44242245
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||  || || ||||||||| ||||||||||||||||||||||| | ||||||| |||||||    
T  44242317 gttttggaaaaccctcctagaccagctgactatgcatttttgctgatgtggcatgctccgtcaccttttttgg 44242245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 28142851 - 28142788
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcac 294  Q
    |||||||||||||||||| |  || ||||| |||||||||||||||||||||||| ||||||||    
T  28142851 gttttggaaaacccctctaggccaactgacagtgcatttttgctgatgtggcatgctgcgtcac 28142788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 28462451 - 28462384
Alignment:
Q  233 tttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||| | || || ||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  28462451 tttggaaaacctcactagaccagctgactgtgcatttttgctgatgtggcatactgcgtcaccttttt 28462384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 15748970 - 15748901
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| || || ||||||||||| |||||||||| |||||||| | ||||||||| ||||    
T  15748970 gttttggaaaacccccctagagcagctgactgtacatttttgctaatgtggcacgctgcgtcaccttttt 15748901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 28141786 - 28141849
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcac 294  Q
    |||||||||||||||  | |  ||||||||||||||||||||||||| ||||||| ||||||||    
T  28141786 gttttggaaaacccccataggccagctgactgtgcatttttgctgatttggcatgctgcgtcac 28141849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 303
Target Start/End: Original strand, 38528600 - 38528643
Alignment:
Q  260 ctgtgcatttttgctgatgtggcatgttgcgtcaccctttttgg 303  Q
    ||||||||||||||||||||||||||||| |||||| |||||||    
T  38528600 ctgtgcatttttgctgatgtggcatgttgtgtcaccttttttgg 38528643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 190
Target Start/End: Complemental strand, 43015245 - 43015203
Alignment:
Q  148 ctttatccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  43015245 ctttacccctgtaatataggtcatttttggttttgtcccctgt 43015203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 38935950 - 38935991
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggttttg 182  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  38935950 aataggtctttacccctgtaatataggacacttttggttttg 38935991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 44366863 - 44366923
Alignment:
Q  132 aatttggtcaataggtcttta--tccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||| ||| ||||||||||||  ||||||||||||||| |||||||||||||| |||||||    
T  44366863 aattgggttaataggtctttaactccctgtaatatagggcacttttggttttgccccctgt 44366923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 7576330 - 7576381
Alignment:
Q  141 aataggtctttatccc--tgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||||  ||||||||||| |||||||||||||| |||||||    
T  7576330 aataggtctttatccccctgtaatatagggcacttttggttttgccccctgt 7576381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 9012036 - 9011996
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggtttt 181  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  9012036 aataggtctttatccctgtaatatagttcatttttggtttt 9011996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 5970805 - 5970763
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggttttgt 183  Q
    |||||||||||| ||||||||||||||  ||||||||||||||    
T  5970805 aataggtctttacccctgtaatatagggtacttttggttttgt 5970763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 15809427 - 15809377
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||||| || ||||||||||||||||||||||  |||||||    
T  15809427 aataggtctttatcccctgcaatataggtcacttttggttttcacccctgt 15809377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 16670504 - 16670554
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| ||| ||||||||||| |||||||||||||| |||||||    
T  16670504 aataggtctttaccccctgtaatatagggcacttttggttttgccccctgt 16670554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 30371390 - 30371440
Alignment:
Q  141 aataggtcttta-tccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| |||||||||||||||||| ||||||||||  |||||||    
T  30371390 aataggtctttactccctgtaatataggtcatttttggttttcccccctgt 30371440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 11101106 - 11101139
Alignment:
Q  148 ctttatccctgtaatataggtcacttttggtttt 181  Q
    |||||||||||||||||||| |||||||||||||    
T  11101106 ctttatccctgtaatataggacacttttggtttt 11101139  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 18701556 - 18701597
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggtttt 181  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  18701556 aataggtctttatcccctgtaatataggtcatttttggtttt 18701597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 28484644 - 28484603
Alignment:
Q  141 aataggtcttta-tccctgtaatataggtcacttttggtttt 181  Q
    |||||||||||| |||||||||||||||||| ||||||||||    
T  28484644 aataggtctttactccctgtaatataggtcatttttggtttt 28484603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 29098300 - 29098256
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggttttgtccc 186  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||    
T  29098300 aataggtcttta-ccctgtaatataggtcatttttggttttctccc 29098256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 34404528 - 34404483
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||||||||| |||||||||||| | ||||||| ||||    
T  34404528 gctgactgtgcatttttgatgatgtggcatgattcgtcaccttttt 34404483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 1902950 - 1902986
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  1902950 ccctgtaatatagggcacttttggttttgccccctgt 1902986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 1904446 - 1904410
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  1904446 ccctgtaatatagggcacttttggttttgccccctgt 1904410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 15749046 - 15749010
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| |||||||||||||||| |||||||    
T  15749046 ccctgtaatatatgtcacttttggttttgccccctgt 15749010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 19684222 - 19684258
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| | ||||||||||||||||||||||    
T  19684222 ccctgtaatatatgacacttttggttttgtcccctgt 19684258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 23834601 - 23834637
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||| |||||||||||||| |||||||    
T  23834601 ccctgtaatatagggcacttttggttttgccccctgt 23834637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 182
Target Start/End: Complemental strand, 28462531 - 28462503
Alignment:
Q  154 ccctgtaatataggtcacttttggttttg 182  Q
    |||||||||||||||||||||||||||||    
T  28462531 ccctgtaatataggtcacttttggttttg 28462503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 37200352 - 37200392
Alignment:
Q  141 aataggtctttatccctgtaatataggtcacttttggtttt 181  Q
    |||||||||||| ||||||||||||||||| ||| ||||||    
T  37200352 aataggtctttacccctgtaatataggtcattttcggtttt 37200392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 38937560 - 38937512
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccct 188  Q
    |||||||||||| ||| ||||||||||| |||||||||||||| |||||    
T  38937560 aataggtctttaccccctgtaatatagggcacttttggttttgccccct 38937512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 39341285 - 39341321
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  39341285 ccctgtaatataggtcatttttggttttctcccctgt 39341321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 45323833 - 45323785
Alignment:
Q  253 cagctgactgtgcatttttgctgatgtggcatgttgcgtcacccttttt 301  Q
    |||||||||||||||||||||||| |||||| | || |||||| |||||    
T  45323833 cagctgactgtgcatttttgctgacgtggcacgctgagtcacctttttt 45323785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 237 - 300
Target Start/End: Complemental strand, 111499 - 111436
Alignment:
Q  237 gaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||| || ||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  111499 gaaaacccctctagaccagctgactatgcatttttgctgatgtggcatgatgcgtcaccttttt 111436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 228549 - 228480
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    ||||||||||||||| || ||  |||||||||||||||||||||||||||||||| | ||||||| ||||    
T  228549 gttttggaaaacccccctagactagctgactgtgcatttttgctgatgtggcatgctccgtcaccttttt 228480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 285
Target Start/End: Original strand, 227374 - 227521
Alignment:
Q  141 aataggtcttta--tccctgtaatataggtcacttttggttttgtcccctgtnnnnnnnnnnnttta-gatttggtccttgtaaaannnnnnngttttgg 237  Q
    ||||||||||||  |||||||||||||||||||||||||||||| ||||| |           |||  |||| |||||||||||||       |||||||    
T  227374 aataggtctttacctccctgtaatataggtcacttttggttttgccccctataatttttattttttttgattcggtccttgtaaaatgtttttgttttgg 227473  T
Q  238 aaaacccctctggatcagctgactgtgcatttttgctgatgtggcatg 285  Q
    |||||||| ||  |  ||||||||||||||||||| ||||||||||||    
T  227474 aaaacccccctaaacaagctgactgtgcatttttgttgatgtggcatg 227521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 10474 - 10519
Alignment:
Q  255 gctgactgtgcatttttgctgatgtggcatgttgcgtcaccctttt 300  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||||    
T  10474 gctgactgtgcatttttgcttatgtggcatgatgcgtcaccttttt 10519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 4687 - 4723
Alignment:
Q  257 tgactgtgcatttttgctgatgtggcatgttgcgtca 293  Q
    ||||||||||||||||||||||||||||| |||||||    
T  4687 tgactgtgcatttttgctgatgtggcatgatgcgtca 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 14926 - 14978
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggca 283  Q
    ||||||||||||||| || |  |||||||||||||||||| ||||||||||||    
T  14926 gttttggaaaacccccctaggccagctgactgtgcattttcgctgatgtggca 14978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 15877 - 15927
Alignment:
Q  141 aataggtctttatccc-tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||||||| ||||||||| | ||||||| ||||||||||||||    
T  15877 aataggtctttatcccctgtaatatatgacactttttgttttgtcccctgt 15927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 36704 - 36650
Alignment:
Q  231 gttttggaaaacccctctggatcagctgactgtgcatttttgctgatgtggcatg 285  Q
    ||||||||||||||| || |  ||| ||||||| |||||||||||||||||||||    
T  36704 gttttggaaaacccccctaggccagttgactgtacatttttgctgatgtggcatg 36650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1797 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1797
Description:

Target: scaffold1797; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 716 - 680
Alignment:
Q  154 ccctgtaatataggtcacttttggttttgtcccctgt 190  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  716 ccctgtaatataggtcatttttggttttctcccctgt 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 340 - 289
Alignment:
Q  141 aataggtctttatccc--tgtaatataggtcacttttggttttgtcccctgt 190  Q
    |||||||||||| |||  ||||||||||| |||||||||||||| |||||||    
T  340 aataggtctttacccccatgtaatatagggcacttttggttttgccccctgt 289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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