View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0936_high_21 (Length: 251)

Name: NF0936_high_21
Description: NF0936
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0936_high_21
NF0936_high_21
[»] chr4 (43 HSPs)
chr4 (29-103)||(11027697-11027771)
chr4 (30-103)||(26564456-26564529)
chr4 (30-105)||(5903011-5903086)
chr4 (30-103)||(7608595-7608668)
chr4 (31-103)||(55827021-55827093)
chr4 (30-105)||(6482422-6482497)
chr4 (30-105)||(11123264-11123339)
chr4 (30-103)||(47550750-47550823)
chr4 (30-103)||(48459111-48459184)
chr4 (30-98)||(31918957-31919025)
chr4 (30-109)||(6382671-6382750)
chr4 (30-105)||(44887529-44887604)
chr4 (30-103)||(3737422-3737495)
chr4 (30-103)||(21423486-21423559)
chr4 (29-102)||(39046583-39046656)
chr4 (35-103)||(1724712-1724780)
chr4 (30-102)||(29755728-29755800)
chr4 (30-105)||(39374965-39375039)
chr4 (48-103)||(43309092-43309147)
chr4 (30-104)||(4766712-4766786)
chr4 (30-103)||(15987626-15987699)
chr4 (30-103)||(16217065-16217138)
chr4 (30-103)||(43892136-43892209)
chr4 (30-102)||(37348749-37348821)
chr4 (31-103)||(42774386-42774458)
chr4 (29-103)||(42299448-42299525)
chr4 (30-85)||(44317187-44317242)
chr4 (33-103)||(50509924-50509995)
chr4 (29-103)||(28695526-28695600)
chr4 (30-72)||(37107068-37107110)
chr4 (30-103)||(12825856-12825929)
chr4 (30-103)||(31752165-31752238)
chr4 (42-103)||(53906686-53906747)
chr4 (68-103)||(568019-568054)
chr4 (29-100)||(19534083-19534154)
chr4 (56-103)||(21544181-21544228)
chr4 (30-84)||(13770860-13770914)
chr4 (55-105)||(24636957-24637007)
chr4 (30-103)||(36918690-36918763)
chr4 (30-103)||(42907433-42907506)
chr4 (30-86)||(10286910-10286966)
chr4 (55-99)||(11172575-11172619)
chr4 (55-103)||(47103341-47103389)
[»] scaffold0036 (1 HSPs)
scaffold0036 (30-106)||(33011-33087)
[»] chr8 (33 HSPs)
chr8 (30-103)||(5858853-5858926)
chr8 (30-103)||(24927568-24927641)
chr8 (30-105)||(32302677-32302752)
chr8 (30-103)||(34301550-34301623)
chr8 (30-103)||(2076232-2076305)
chr8 (30-103)||(14185963-14186036)
chr8 (30-103)||(17220336-17220409)
chr8 (31-104)||(17468874-17468947)
chr8 (30-104)||(45235688-45235762)
chr8 (30-103)||(9642763-9642836)
chr8 (30-103)||(20399255-20399328)
chr8 (30-100)||(31323491-31323561)
chr8 (35-104)||(4231120-4231189)
chr8 (30-103)||(24870419-24870492)
chr8 (30-103)||(27058726-27058799)
chr8 (30-103)||(34776081-34776154)
chr8 (30-102)||(9434651-9434723)
chr8 (31-103)||(40248739-40248811)
chr8 (48-103)||(17084584-17084639)
chr8 (30-93)||(39445958-39446021)
chr8 (30-103)||(1012250-1012323)
chr8 (30-103)||(28977510-28977583)
chr8 (31-104)||(34139064-34139137)
chr8 (30-102)||(27932055-27932127)
chr8 (30-102)||(29109214-29109286)
chr8 (26-102)||(35215103-35215179)
chr8 (39-102)||(24568559-24568622)
chr8 (31-105)||(11255402-11255476)
chr8 (71-105)||(11899723-11899757)
chr8 (30-105)||(6388961-6389037)
chr8 (60-103)||(28345051-28345094)
chr8 (48-103)||(33633396-33633451)
chr8 (31-76)||(29089372-29089417)
[»] chr6 (21 HSPs)
chr6 (30-103)||(5863768-5863841)
chr6 (30-104)||(10188470-10188544)
chr6 (31-103)||(27534314-27534386)
chr6 (30-103)||(2366945-2367018)
chr6 (30-103)||(3484319-3484392)
chr6 (30-103)||(9442268-9442341)
chr6 (30-103)||(12141016-12141089)
chr6 (30-103)||(30815871-30815943)
chr6 (30-103)||(32853463-32853536)
chr6 (30-105)||(14505716-14505791)
chr6 (29-108)||(24225315-24225393)
chr6 (30-103)||(32052675-32052748)
chr6 (48-104)||(256967-257023)
chr6 (30-106)||(11762062-11762138)
chr6 (30-103)||(10142913-10142986)
chr6 (30-99)||(34179465-34179534)
chr6 (48-99)||(32959506-32959557)
chr6 (30-101)||(33061978-33062049)
chr6 (30-103)||(9458317-9458390)
chr6 (54-103)||(10925925-10925974)
chr6 (30-99)||(14254584-14254652)
[»] scaffold0007 (1 HSPs)
scaffold0007 (30-106)||(199189-199265)
[»] chr1 (35 HSPs)
chr1 (30-101)||(44792626-44792697)
chr1 (30-104)||(20774250-20774324)
chr1 (29-105)||(34610691-34610767)
chr1 (30-102)||(34673655-34673727)
chr1 (30-105)||(40087854-40087929)
chr1 (30-101)||(44615872-44615943)
chr1 (30-105)||(45866582-45866657)
chr1 (30-104)||(28297551-28297625)
chr1 (31-103)||(13390074-13390146)
chr1 (30-102)||(23493721-23493793)
chr1 (30-105)||(14892323-14892398)
chr1 (30-105)||(36187618-36187693)
chr1 (28-103)||(49251126-49251201)
chr1 (30-104)||(24710476-24710550)
chr1 (30-103)||(17092356-17092429)
chr1 (30-103)||(23966477-23966550)
chr1 (30-104)||(18354467-18354541)
chr1 (31-104)||(34060411-34060484)
chr1 (30-103)||(51421514-51421587)
chr1 (35-103)||(38686272-38686340)
chr1 (30-105)||(9983282-9983357)
chr1 (30-105)||(50427050-50427125)
chr1 (30-103)||(5180670-5180743)
chr1 (30-103)||(42440031-42440104)
chr1 (30-105)||(3628371-3628446)
chr1 (29-103)||(39615921-39615995)
chr1 (48-105)||(8880008-8880065)
chr1 (48-105)||(14890752-14890809)
chr1 (57-100)||(19572923-19572966)
chr1 (29-104)||(29871679-29871754)
chr1 (30-104)||(29936035-29936109)
chr1 (38-103)||(2514275-2514340)
chr1 (48-97)||(16903129-16903178)
chr1 (30-103)||(35937213-35937285)
chr1 (59-103)||(38093568-38093612)
[»] chr2 (33 HSPs)
chr2 (30-104)||(13830354-13830428)
chr2 (30-104)||(15546312-15546386)
chr2 (30-103)||(7315046-7315119)
chr2 (30-103)||(10208826-10208899)
chr2 (30-103)||(11009132-11009205)
chr2 (30-103)||(31942551-31942624)
chr2 (30-103)||(36128504-36128577)
chr2 (30-105)||(6028285-6028360)
chr2 (30-104)||(10920281-10920355)
chr2 (30-103)||(16227086-16227159)
chr2 (31-105)||(37319561-37319636)
chr2 (60-104)||(8916355-8916399)
chr2 (30-98)||(9632022-9632090)
chr2 (31-103)||(30846564-30846636)
chr2 (30-103)||(37473126-37473199)
chr2 (31-104)||(43371190-43371263)
chr2 (30-86)||(22900423-22900479)
chr2 (30-85)||(10212076-10212131)
chr2 (31-105)||(42798386-42798460)
chr2 (51-104)||(4427522-4427575)
chr2 (30-93)||(12194224-12194285)
chr2 (30-101)||(18106475-18106545)
chr2 (30-105)||(35248837-35248912)
chr2 (36-103)||(44746500-44746567)
chr2 (30-100)||(3546763-3546833)
chr2 (31-104)||(34544764-34544838)
chr2 (69-103)||(45115218-45115252)
chr2 (35-105)||(45256441-45256511)
chr2 (55-104)||(18485251-18485300)
chr2 (30-103)||(25209942-25210015)
chr2 (30-103)||(37999105-37999177)
chr2 (55-103)||(14331162-14331210)
chr2 (30-86)||(24414528-24414584)
[»] scaffold0014 (1 HSPs)
scaffold0014 (30-103)||(14540-14613)
[»] chr7 (42 HSPs)
chr7 (30-103)||(10072112-10072185)
chr7 (30-103)||(10996243-10996316)
chr7 (30-103)||(21702303-21702376)
chr7 (30-103)||(37578887-37578960)
chr7 (29-105)||(25905250-25905326)
chr7 (29-104)||(5916471-5916546)
chr7 (30-105)||(43507055-43507130)
chr7 (30-103)||(2632364-2632436)
chr7 (30-103)||(30650254-30650327)
chr7 (30-104)||(17851488-17851562)
chr7 (30-103)||(16865793-16865866)
chr7 (30-103)||(35074093-35074165)
chr7 (31-103)||(7779631-7779703)
chr7 (32-104)||(24425071-24425142)
chr7 (29-104)||(18125623-18125698)
chr7 (30-93)||(37196384-37196447)
chr7 (57-103)||(29292251-29292297)
chr7 (31-103)||(16075319-16075392)
chr7 (30-103)||(33840698-33840771)
chr7 (30-103)||(38152524-38152597)
chr7 (30-103)||(39316618-39316691)
chr7 (31-103)||(44658637-44658709)
chr7 (30-105)||(5567537-5567612)
chr7 (30-105)||(45886161-45886236)
chr7 (29-103)||(3920162-3920236)
chr7 (31-105)||(24752655-24752729)
chr7 (30-103)||(18826266-18826338)
chr7 (30-103)||(44986293-44986366)
chr7 (30-103)||(46127559-46127632)
chr7 (31-103)||(3227938-3228010)
chr7 (30-86)||(42005542-42005598)
chr7 (30-105)||(25980320-25980394)
chr7 (59-105)||(5432461-5432507)
chr7 (30-99)||(25783297-25783365)
chr7 (30-103)||(27850719-27850792)
chr7 (30-103)||(38140186-38140259)
chr7 (29-105)||(27062679-27062755)
chr7 (55-103)||(42908472-42908520)
chr7 (59-103)||(43550903-43550947)
chr7 (50-105)||(39456392-39456447)
chr7 (30-104)||(41103266-41103340)
chr7 (29-85)||(27062768-27062824)
[»] chr5 (36 HSPs)
chr5 (30-103)||(15889830-15889903)
chr5 (29-105)||(6093501-6093577)
chr5 (30-104)||(40517425-40517499)
chr5 (30-103)||(17853676-17853749)
chr5 (30-103)||(30996217-30996290)
chr5 (30-100)||(1218409-1218479)
chr5 (29-103)||(33862585-33862659)
chr5 (30-103)||(12447002-12447074)
chr5 (30-103)||(35311436-35311509)
chr5 (30-101)||(3565116-3565186)
chr5 (31-105)||(38006868-38006942)
chr5 (30-103)||(20973882-20973955)
chr5 (36-103)||(4582839-4582906)
chr5 (29-103)||(22695297-22695371)
chr5 (29-103)||(24207259-24207333)
chr5 (30-103)||(42987874-42987944)
chr5 (31-103)||(2413116-2413189)
chr5 (30-99)||(4920456-4920524)
chr5 (30-103)||(10126726-10126798)
chr5 (30-103)||(13402400-13402473)
chr5 (30-103)||(27088748-27088821)
chr5 (30-103)||(28045271-28045344)
chr5 (30-99)||(30115118-30115187)
chr5 (31-103)||(3572843-3572915)
chr5 (55-103)||(12235802-12235850)
chr5 (63-103)||(27900891-27900931)
chr5 (31-103)||(33420582-33420654)
chr5 (30-77)||(5909079-5909126)
chr5 (30-105)||(23045410-23045485)
chr5 (30-103)||(6156307-6156379)
chr5 (54-103)||(12712946-12712995)
chr5 (54-103)||(12774210-12774259)
chr5 (55-104)||(28569560-28569609)
chr5 (55-103)||(2680815-2680863)
chr5 (30-102)||(10822935-10823006)
chr5 (31-99)||(12866950-12867018)
[»] chr3 (40 HSPs)
chr3 (178-250)||(1336999-1337071)
chr3 (30-105)||(39655659-39655734)
chr3 (30-105)||(44162401-44162476)
chr3 (29-103)||(30616699-30616773)
chr3 (30-103)||(6738768-6738841)
chr3 (30-103)||(29283955-29284027)
chr3 (30-103)||(39728301-39728374)
chr3 (30-103)||(44107195-44107268)
chr3 (30-103)||(49579683-49579756)
chr3 (31-103)||(23547375-23547447)
chr3 (30-106)||(41937445-41937521)
chr3 (30-105)||(7470174-7470248)
chr3 (30-105)||(42758017-42758092)
chr3 (30-105)||(44638892-44638967)
chr3 (30-108)||(34154030-34154108)
chr3 (30-103)||(34025578-34025651)
chr3 (30-103)||(48391206-48391279)
chr3 (30-103)||(23580447-23580519)
chr3 (30-103)||(44252360-44252433)
chr3 (35-103)||(4016434-4016502)
chr3 (31-103)||(23154404-23154476)
chr3 (30-105)||(4557701-4557776)
chr3 (30-100)||(19111358-19111428)
chr3 (30-100)||(31127191-31127261)
chr3 (30-79)||(49025325-49025374)
chr3 (31-95)||(29858579-29858643)
chr3 (30-98)||(17146546-17146611)
chr3 (34-104)||(20086633-20086703)
chr3 (29-103)||(43582197-43582270)
chr3 (30-79)||(54316786-54316835)
chr3 (30-99)||(55439075-55439144)
chr3 (35-103)||(1722591-1722658)
chr3 (52-86)||(773269-773303)
chr3 (30-104)||(48306932-48307006)
chr3 (31-72)||(27252163-27252204)
chr3 (30-101)||(830642-830714)
chr3 (59-103)||(2487402-2487446)
chr3 (31-103)||(22536241-22536312)
chr3 (67-103)||(44953847-44953883)
chr3 (31-83)||(53631540-53631592)
[»] scaffold0022 (1 HSPs)
scaffold0022 (30-103)||(90216-90289)
[»] scaffold1630 (1 HSPs)
scaffold1630 (31-103)||(1242-1314)
[»] scaffold0189 (1 HSPs)
scaffold0189 (29-105)||(3875-3951)
[»] scaffold0095 (1 HSPs)
scaffold0095 (30-93)||(32920-32983)
[»] scaffold0198 (1 HSPs)
scaffold0198 (48-103)||(3750-3805)
[»] scaffold0519 (1 HSPs)
scaffold0519 (31-105)||(9919-9993)
[»] scaffold0013 (1 HSPs)
scaffold0013 (55-103)||(128528-128576)
[»] scaffold0097 (1 HSPs)
scaffold0097 (30-100)||(33206-33276)
[»] scaffold0184 (1 HSPs)
scaffold0184 (68-108)||(2567-2607)


Alignment Details
Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 11027771 - 11027697
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  11027771 agtaagtatatgagaatcaggtatgaggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 11027697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 26564529 - 26564456
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  26564529 gtaagtatatgagaatcaggtatgaggacgggaaatgtaaaacccgtccccaccccgccccattgccatgccta 26564456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 5903011 - 5903086
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||| || |||||||||||||||    
T  5903011 gtaagtatatgagaatcgggtatggggatggggaaggtaaaacccgtccccaccccgcccaattgccatgcctaat 5903086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 7608668 - 7608595
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  7608668 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 7608595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 55827021 - 55827093
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  55827021 taagtatatgagaatccggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 55827093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 6482422 - 6482497
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||| |||||| | | |||||||||||||||||||||||||||| |||||| |||||||||||    
T  6482422 gtaagtatatgagaatcgggtatgggaacggggaatgtaaaacccgtccccaccccgccccattaccatgcctaat 6482497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 11123264 - 11123339
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||| |||||| | | |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  11123264 gtaagtatatgagaatcgggtatgggaacggggaaggtaaaacccgtccccaccccgccccattgccatgcctaat 11123339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 47550750 - 47550823
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||| ||||||| |||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  47550750 gtaagtatacgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 47550823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 48459184 - 48459111
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||| |||||||| ||||||||    
T  48459184 gtaagtatatgagaatcgggtatggggatggagaaggtaaaacccgtccccaccccttcccattgtcatgccta 48459111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 31918957 - 31919025
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccat 98  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||| |||||||||||    
T  31918957 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccat 31919025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 6382671 - 6382750
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaatgctc 109  Q
    ||||||||||||||||| |||||| ||  |||||| |||||||| |||||||||||| |||||||||||||||| |||||    
T  6382671 gtaagtatatgagaatcgggtatgggggcggggaaggtaaaaccggtccccaccccgccccattgccatgcctagtgctc 6382750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 44887604 - 44887529
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||| ||||||||||  ||||| |||||| || ||||||||||| ||||||||||||||||||    
T  44887604 gtaagtatatgagaatcgggtatgaggacagggaaggtaaaatccatccccaccccgccccattgccatgcctaat 44887529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 3737495 - 3737422
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||| |||||||||||  |||||| |||||| ||| ||||||||||||||||||||| ||||||||||||||||    
T  3737495 gtaaatatatgagaatatggtatggggatggagaaggtaaaacccgtccccaccccgccccattgccatgccta 3737422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 21423559 - 21423486
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| | | ||||||||||| |||||||||||| ||||||||||||||||    
T  21423559 gtaagtatatgagaatcgggtatggggacgagaaatgtaaaacctgtccccaccccgccccattgccatgccta 21423486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 39046656 - 39046583
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcct 102  Q
    ||||||||||| |||||| |||||| ||| ||| || ||||||||||||||||||||||||||||| |||||||    
T  39046656 agtaagtatataagaatcgggtatggggacgggaaaggtaaaacccgtccccaccccgtcccattgtcatgcct 39046583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 1724712 - 1724780
Alignment:
Q  35 tatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||| |||||  ||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  1724712 tatatgagaatcgggtattgggacggggaatgcaaaacccgtccccaccccgccccattgccatgccta 1724780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 29755728 - 29755800
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcct 102  Q
    |||||| |||||||||| |||||| ||| ||||||||||||||| |||||||||| | |||||||||||||||    
T  29755728 gtaagtgtatgagaatcgggtatggggacggggaatgtaaaacctgtccccaccctgccccattgccatgcct 29755800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 39375039 - 39374965
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||||| ||||| || ||| |||||||||||||||||||||||| | ||||| ||||||||||    
T  39375039 gtaagtatatgagaatcagatatgaagacggg-aatgtaaaacccgtccccaccccgcctcattgtcatgcctaat 39374965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 43309147 - 43309092
Alignment:
Q  48 ggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||||||||||||||| || ||||||||||||||||    
T  43309147 ggtatgaggatggggaaggtaaaacccgtccccaccacgccccattgccatgccta 43309092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 4766712 - 4766786
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||||||||||||| | |||| ||| |||||| ||||||| ||||||||||||| | |||||||||||||||    
T  4766712 gtaagtatatgagaatcggatatggggacggggaaggtaaaacacgtccccaccccgcctcattgccatgcctaa 4766786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 15987626 - 15987699
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||||  ||||| ||| | |||| ||||||| ||||||||||||| ||||||||||||||||    
T  15987626 gtaagtatatgagaatcgagtatggggacgaggaaggtaaaactcgtccccaccccgccccattgccatgccta 15987699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 16217065 - 16217138
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| | |||| ||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  16217065 gtaagtatatgagaatcggatatggggacggggaaggtaaaacccttccgcaccccgccccattgccatgccta 16217138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 43892209 - 43892136
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||  ||||||  || |||||| |||||| ||||||||| |||||||||||||||||||||    
T  43892209 gtaagtatatgagaattgggtatggagacggggaaggtaaaatccgtccccatcccgtcccattgccatgccta 43892136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 37348821 - 37348749
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcct 102  Q
    ||||||||| ||||||| |||||| ||| || |||||||||||||||||| |||||| ||||||| |||||||    
T  37348821 gtaagtataagagaatcgggtatggggacggagaatgtaaaacccgtccctaccccgccccattgtcatgcct 37348749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 42774458 - 42774386
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||  | |||| ||| | |||| |||||||||||||| |||||| ||||||||||||||||    
T  42774458 taagtatatgagaattggatatggggacgtggaaggtaaaacccgtccctaccccgccccattgccatgccta 42774386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 42299525 - 42299448
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgt---ccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||||| |||||| ||| |||||||||||||| |||   |||| ||||  ||||||||||||||||    
T  42299525 agtaagtatatgagaatcgggtatggggacggggaatgtaaaactcgttccccccccccccccccattgccatgccta 42299448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 44317242 - 44317187
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccacccc 85  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||||||| ||||    
T  44317242 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccccccc 44317187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 50509924 - 50509995
Alignment:
Q  33 agtatatgagaatcaggtatgaggatggggaatgtaaaacccgtcccca-ccccgtcccattgccatgccta 103  Q
    |||||||||||||| || ||||||| ||||||||||||| | ||||||| ||||  ||||||||||||||||    
T  50509924 agtatatgagaatcgggcatgaggacggggaatgtaaaatctgtccccacccccaccccattgccatgccta 50509995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 28695526 - 28695600
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||| || |||||||||||| |  || ||| ||||||||||||| |||||||  |||||||||||||||    
T  28695526 agtaagtatacgataatcaggtatgaaggcggagaaggtaaaacccgtccgcaccccgctccattgccatgccta 28695600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 37107110 - 37107068
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaac 72  Q
    ||||||| || ||||||||||||||||||||||||||||||||    
T  37107110 gtaagtacataagaatcaggtatgaggatggggaatgtaaaac 37107068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 12825856 - 12825929
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||| | | |||||| ||| |||| |||||||||||||||||||| ||| ||| ||||||||||| ||||    
T  12825856 gtaagtatttaaaaatcagatataaggacggggaatgtaaaacccgtcctcactccgccccattgccataccta 12825929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 31752238 - 31752165
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| | |||| ||||||||| |||||| |||  |||||| |||||||||    
T  31752238 gtaagtatatgagaatcgggtatggggacgaggaaggtaaaacccatccccatcccaccccattaccatgccta 31752165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 53906686 - 53906747
Alignment:
Q  42 gaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||| ||||||  |||||| || ||||||||||||||||||||  ||||||||||||||||    
T  53906686 gaatcgggtatggagatgggaaaggtaaaacccgtccccaccccaccccattgccatgccta 53906747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 103
Target Start/End: Complemental strand, 568054 - 568019
Alignment:
Q  68 aaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||||| ||||||||||||||||    
T  568054 aaaacccgtccccaccccgccccattgccatgccta 568019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 19534154 - 19534083
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgc 100  Q
    |||||||||||||||||| |||||| | | |||| ||||||||| | ||||||||||  ||||||| |||||    
T  19534154 agtaagtatatgagaatcgggtatgggaacggggtatgtaaaacacatccccaccccaccccattgtcatgc 19534083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 21544228 - 21544181
Alignment:
Q  56 gatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||| | ||||||||||||||||| | ||||||||||||||||    
T  21544228 gatggggaaggcaaaacccgtccccaccctgccccattgccatgccta 21544181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 13770860 - 13770914
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccc 84  Q
    |||||||||| |||||| |||||  ||| ||||||||||||| ||||||||||||    
T  13770860 gtaagtatataagaatcgggtatagggacggggaatgtaaaatccgtccccaccc 13770914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 24637007 - 24636957
Alignment:
Q  55 ggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||||||| | |||||||||||||||| || ||||||| ||||||||||    
T  24637007 ggatggggaaggcaaaacccgtccccacctcgccccattgtcatgcctaat 24636957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 36918763 - 36918690
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||| |  |||||| ||| |||||| ||||||| | ||||||||||| |  |||||||||||||    
T  36918763 gtaagtatatgagagtagggtatggggacggggaaggtaaaactcatccccaccccgcctgattgccatgccta 36918690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 42907506 - 42907433
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||   ||||| | | |||||| |||||||| ||| |||||||  ||||||||||||||||    
T  42907506 gtaagtatatgagaatagtgtatgcgaacggggaaggtaaaaccagtctccaccccaccccattgccatgccta 42907433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 10286966 - 10286910
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccg 86  Q
    |||||||||| |||||  |||||| ||| |||| | |||||||||||||||||||||    
T  10286966 gtaagtatattagaatagggtatggggacgggggaggtaaaacccgtccccaccccg 10286910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 11172619 - 11172575
Alignment:
Q  55 ggatggggaatgtaaaacccgtccccaccccgtcccattgccatg 99  Q
    |||||||||| |  |||||||||||||||||| ||||||||||||    
T  11172619 ggatggggaaggcgaaacccgtccccaccccgccccattgccatg 11172575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 47103389 - 47103341
Alignment:
Q  55 ggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||| | ||||| ||||||| ||||| ||||||||||||||||    
T  47103389 ggatggggaaggcaaaactcgtcccctccccgccccattgccatgccta 47103341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 33087 - 33011
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaatg 106  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  33087 gtaagtatatgagaatcaggtatggggacggggaatgtaaaacctgtccccaccccgccccattgccatgcctaatg 33011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 5858853 - 5858926
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  5858853 gtaagtatatgagaatcaggtatggggacggggaatgtaaaacctgtccccaccccgccccattgccatgccta 5858926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 24927641 - 24927568
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  24927641 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgtcccattgccatgccta 24927568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 32302752 - 32302677
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  32302752 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgcctaat 32302677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 34301550 - 34301623
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||| |||| |||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  34301550 gtaagtatatgataatcgggtatggggatggggaaggtaaaacccgtccccaccccgccccattgccatgccta 34301623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 2076232 - 2076305
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| |||||| |||||||||||||||||| || ||||||||||||||||    
T  2076232 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccgcgccccattgccatgccta 2076305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 14186036 - 14185963
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||  |||||| ||| |||||||||||||| ||||||||||||| ||||||||||||||||    
T  14186036 gtaagtatatgagaattgggtatggggacggggaatgtaaaactcgtccccaccccgccccattgccatgccta 14185963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 17220409 - 17220336
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| || ||| ||||||||||||||||||||| ||||||||||||||||    
T  17220409 gtaagtatatgagaatcgggtatggggacggagaaggtaaaacccgtccccaccccgccccattgccatgccta 17220336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 17468947 - 17468874
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    |||||||||||||||| |||||| ||| |||||||||||||| ||||| ||||||| |||||||||||||||||    
T  17468947 taagtatatgagaatcgggtatggggacggggaatgtaaaactcgtcctcaccccgccccattgccatgcctaa 17468874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 45235762 - 45235688
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||| ||||||||| | |||| ||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  45235762 gtaagtacatgagaatcggatatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgcctaa 45235688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 9642763 - 9642836
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||   ||||| |||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  9642763 gtaagtatatgagaatagagtatggggatggggaaggtaaaacccgtccccaccccaccccattgccatgccta 9642836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 20399328 - 20399255
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||  |||||| ||| | |||||||||||||| ||||||||||| ||||||||||||||||    
T  20399328 gtaagtatatgagaattgggtatggggacgaggaatgtaaaacccttccccaccccgccccattgccatgccta 20399255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 31323561 - 31323491
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgc 100  Q
    ||||||||||||||||| |||||||| | |||||| |||||| ||||||||||||||  ||||||||||||    
T  31323561 gtaagtatatgagaatcgggtatgagaacggggaaggtaaaatccgtccccaccccgctccattgccatgc 31323491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 4231120 - 4231189
Alignment:
Q  35 tatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    |||||||||||| |||||| ||| || ||| ||||||||||||||||||||  |||||||||||||||||    
T  4231120 tatatgagaatcgggtatggggacggagaaggtaaaacccgtccccaccccaccccattgccatgcctaa 4231189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 24870419 - 24870492
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||||| ||||  ||||||||| |||||||| | ||||||||||||||||    
T  24870419 gtaagtatatgagaatcgggtatggggatgaggaagataaaacccgcccccaccctgccccattgccatgccta 24870492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 27058726 - 27058799
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||   ||||| ||| |||| | ||||||||||||||||||||| ||||||||||||||||    
T  27058726 gtaagtatatgagaatagagtatggggacgggggaggtaaaacccgtccccaccccgccccattgccatgccta 27058799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 34776154 - 34776081
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||| |||||||||||| ||||||  ||||||||| |||||||||||||||| |||| ||||||||||| ||||    
T  34776154 gtaaatatatgagaatcgggtatggagatggggaaggtaaaacccgtccccatcccgccccattgccataccta 34776081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 9434723 - 9434651
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcct 102  Q
    |||||||||||||||   |||||| |||||||||| ||||||| ||||||| ||||| |||||||||||||||    
T  9434723 gtaagtatatgagaacagggtatggggatggggaaggtaaaactcgtcccctccccgccccattgccatgcct 9434651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 40248739 - 40248811
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||| | |||||||| ||  || ||||||||||||||||||| | ||||||||||||||||    
T  40248739 taagtatatgagaatcggatatgaggacggaaaaggtaaaacccgtccccaccctgccccattgccatgccta 40248811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 17084584 - 17084639
Alignment:
Q  48 ggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||| |||||||||| ||||||||||||||||||||| |||||| |||||||||    
T  17084584 ggtatggggatggggaaggtaaaacccgtccccaccccgccccattaccatgccta 17084639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 39445958 - 39446021
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccatt 93  Q
    |||||||||||||||||||||||| ||| || ||| ||||||| ||||||||||||| ||||||    
T  39445958 gtaagtatatgagaatcaggtatggggacggagaaggtaaaactcgtccccaccccgccccatt 39446021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 1012323 - 1012250
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| | |||||||| ||| |||||||||| ||||||||||||  |||||||  |||||||    
T  1012323 gtaagtatatgagaatcggatatgaggacgggaaatgtaaaactcgtccccaccccaccccattgtgatgccta 1012250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 28977510 - 28977583
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||| |||||| |||||| |||  |||||  |||||| ||||||||||||| ||||||||||||||||    
T  28977510 gtaagtatataagaatcgggtatggggacagggaagataaaacacgtccccaccccgccccattgccatgccta 28977583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 34139137 - 34139064
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||||||||||||| ||||| |||||  |||||||||| |||||||||||||| |  |||| |||||||||    
T  34139137 taagtatatgagaatcatgtatggggatgaagaatgtaaaatccgtccccaccccgcctaattgtcatgcctaa 34139064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 27932127 - 27932055
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcct 102  Q
    |||||||||||||||||  ||||| ||| | |||| |||||| || ||||||||||| |||||||||||||||    
T  27932127 gtaagtatatgagaatcgcgtatggggacgaggaaggtaaaatccatccccaccccgccccattgccatgcct 27932055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 29109214 - 29109286
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcct 102  Q
    |||| ||||||||||||  ||||| | | |||||| |||||| |||||||||||||| |||||||||||||||    
T  29109214 gtaaatatatgagaatcgagtatgggaacggggaaggtaaaatccgtccccaccccgccccattgccatgcct 29109286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 35215179 - 35215103
Alignment:
Q  26 atcagtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcct 102  Q
    ||||||||||||||||||||| | |||| | | || ||||| ||||||||||| ||||| | |||||||||||||||    
T  35215179 atcagtaagtatatgagaatcggatatgtgaacggagaatgcaaaacccgtcctcaccctgccccattgccatgcct 35215103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 24568622 - 24568559
Alignment:
Q  39 tgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcct 102  Q
    |||||||| |||||| |||  || |||| ||||||||||||||||||| |||||||||||||||    
T  24568622 tgagaatcgggtatggggaccggaaatgcaaaacccgtccccaccccgccccattgccatgcct 24568559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 11255402 - 11255476
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||| | |||||  || |||||| ||||||| ||||||||||||  ||||||| ||||||||||    
T  11255402 taagtatatgagaattatgtatggagacggggaaggtaaaacacgtccccaccccaccccattgtcatgcctaat 11255476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 11899723 - 11899757
Alignment:
Q  71 acccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||||||||||||||||||||||||||||||||    
T  11899723 acccgtccccaccccgtcccattgccatgcctaat 11899757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 6388961 - 6389037
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtcccca-ccccgtcccattgccatgcctaat 105  Q
    |||||||||||||| |   ||||| ||| |||||| |||||||||||||||| ||||| | ||||||||||||||||    
T  6388961 gtaagtatatgagagtagagtatggggacggggaaggtaaaacccgtccccacccccgcctcattgccatgcctaat 6389037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 28345094 - 28345051
Alignment:
Q  60 gggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||    
T  28345094 gggaaggtaaaacccgtcaccaccccgccccattgccatgccta 28345051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 33633396 - 33633451
Alignment:
Q  48 ggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||| ||| | |||| |||||||||||||||| |||| ||||||||||||||||    
T  33633396 ggtatggggacgaggaaggtaaaacccgtccccatcccgccccattgccatgccta 33633451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 29089417 - 29089372
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgt 76  Q
    |||||||||||||||| | |||||||||| |||||| |||||||||    
T  29089417 taagtatatgagaatcggatatgaggatgaggaatgcaaaacccgt 29089372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 5863768 - 5863841
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  5863768 gtaagtatatgagaatcaggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 5863841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 10188470 - 10188544
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||||||||||||| |||||| |||||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  10188470 gtaagtatatgagaatcgggtatggggatggggaaggtaaaactcgtccccaccccgccccattgccatgcctaa 10188544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 27534386 - 27534314
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  27534386 taagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 27534314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 2367018 - 2366945
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| | |||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  2367018 gtaagtatatgagaatcggatatggggatgaggaaggtaaaacccgtccccaccccgccccattgccatgccta 2366945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 3484319 - 3484392
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||  ||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  3484319 gtaagtatatgagaatcgggtatagggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 3484392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 9442341 - 9442268
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| ||||||  || |||||| ||||||||||||||||||||||||||||| ||||||||    
T  9442341 gtaagtatatgagaatcgggtatggagacggggaaggtaaaacccgtccccaccccgtcccattgtcatgccta 9442268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 12141089 - 12141016
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||| ||||||||||||| ||||||||||||||||    
T  12141089 gtaagtatatgagaatcgggtatggggacggggaaggtaaaactcgtccccaccccgccccattgccatgccta 12141016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 30815943 - 30815871
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||||||||||  || |||||||||||||||| ||||||||||| ||||||||||||||||    
T  30815943 gtaagtatatgagaatcaggtatggagacggggaatgtaaaacccatccccaccccg-cccattgccatgccta 30815871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 32853536 - 32853463
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||| |||| |||||| |||||||||| |||||||||||| |||||||| ||||||||||||||||    
T  32853536 gtaagtatatgataatcgggtatggggatggggaaggtaaaacccgtctccaccccgccccattgccatgccta 32853463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 14505791 - 14505716
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||| |||||| ||| | ||||||||||||||||||||||| || || |||||||||||||||    
T  14505791 gtaagtatatgagaatcgggtatggggacgaggaatgtaaaacccgtccccacctcgcccaattgccatgcctaat 14505716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 24225393 - 24225315
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaatgct 108  Q
    |||||||||||||||||| |||||| ||| ||| || ||||||||||||||||||||| |||||||||||||||| ||||    
T  24225393 agtaagtatatgagaatcgggtatggggacggg-aaggtaaaacccgtccccaccccgccccattgccatgcctagtgct 24225315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 32052748 - 32052675
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||||||| |||||| ||||||| |||| ||| ||||  |||||||||||||||    
T  32052748 gtaagtatatgagaatcgggtatgaggacggggaaggtaaaactcgtctccatcccgctccattgccatgccta 32052675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 256967 - 257023
Alignment:
Q  48 ggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    |||||||||| |||||| || |||||||||||||||||| | |||||||||||||||    
T  256967 ggtatgaggacggggaaggtgaaacccgtccccaccccgcctcattgccatgcctaa 257023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 11762138 - 11762062
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaatg 106  Q
    |||||||||| ||||||  |||||   | ||||||||||||||||||||||||||   |||||||||||||||||||    
T  11762138 gtaagtatataagaatcgtgtatggaaacggggaatgtaaaacccgtccccacccttccccattgccatgcctaatg 11762062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 10142913 - 10142986
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||| ||||||| | |||||| | |||||| ||||||| |||||| | |||| ||||||||||||||||    
T  10142913 gtaagtatacgagaatcggatatgagaacggggaaggtaaaactcgtccctatcccgccccattgccatgccta 10142986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 34179465 - 34179534
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatg 99  Q
    |||||||||||||| |  |||||||||| |||||| || |||| ||||||||||| | ||||||||||||    
T  34179465 gtaagtatatgagagtagggtatgaggacggggaaggtgaaactcgtccccaccctgccccattgccatg 34179534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 32959557 - 32959506
Alignment:
Q  48 ggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatg 99  Q
    ||||||||||||||||| |||||||||||||| |||||   |||||||||||    
T  32959557 ggtatgaggatggggaaagtaaaacccgtcccaaccccactccattgccatg 32959506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 33062049 - 33061978
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcc 101  Q
    ||||||||||||||||| |||||| ||| | |||| ||||||  | |||| |||||| ||||||||||||||    
T  33062049 gtaagtatatgagaatcgggtatggggacgaggaaggtaaaattcatccctaccccgccccattgccatgcc 33061978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 9458390 - 9458317
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||| || |  || ||| |||||||||| | ||||||||||||||||||| | ||||| ||||||||    
T  9458390 gtaagtatatgggagtaggggatggggatggggaaggaaaaacccgtccccaccccgcctcattggcatgccta 9458317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 10925925 - 10925974
Alignment:
Q  54 aggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||| ||| |||||||||||||||| |||| | ||||||||||||||    
T  10925925 aggatggtgaaggtaaaacccgtccccaacccgcctcattgccatgccta 10925974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 14254652 - 14254584
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatg 99  Q
    ||||||||||||||||| |||||| | ||| ||| ||||||||||||||| |||||  |||| |||||||    
T  14254652 gtaagtatatgagaatcgggtatgggaatgagga-tgtaaaacccgtccctaccccaccccaatgccatg 14254584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 199189 - 199265
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaatg 106  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||| |||||| ||||||||||||    
T  199189 gtaagtatatgagaatctggtatggggacggggaatgtaaaacccgtccccaccccgccccattaccatgcctaatg 199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 44792697 - 44792626
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcc 101  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  44792697 gtaagtatatgagaatcgggtatggggacggggaatgtaaaacccgtccccaccccgccccattgccatgcc 44792626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 20774324 - 20774250
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  20774324 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgcctaa 20774250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 34610767 - 34610691
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||||||||||||||| |||||| ||| |||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  34610767 agtaagtatatgagaatcgggtatggggacggggaaggtaaaacccatccccaccccgccccattgccatgcctaat 34610691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 34673655 - 34673727
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcct 102  Q
    ||||||||||||||||| | |||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  34673655 gtaagtatatgagaatcggatatggggatgaggaatgtaaaacccgtccccaccccgccccattgccatgcct 34673727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 40087854 - 40087929
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  40087854 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgtcatgcctaat 40087929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 44615872 - 44615943
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcc 101  Q
    ||||||| ||||||||| |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  44615872 gtaagtacatgagaatcgggtatggggacggggaatgtaaaacccgtccccaccccgccccattgccatgcc 44615943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 45866582 - 45866657
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||||||||||||||  ||||||||| |||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  45866582 gtaagtatatgagaatcgagtatgaggacggggaaggtaaaacacgtccccaccccgccccattgccatgcctaat 45866657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 28297625 - 28297551
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||| | |||||||||||||||    
T  28297625 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgcctcattgccatgcctaa 28297551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 13390146 - 13390074
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||| ||||||| ||||||||    
T  13390146 taagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgtcatgccta 13390074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 23493721 - 23493793
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcct 102  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||| || ||||||||||||    
T  23493721 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccctattgccatgcct 23493793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 14892398 - 14892323
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||  |||||| ||| |||||| ||||||||||||||||||| |||||| |||||||||||||    
T  14892398 gtaagtatatgagaatagggtatggggacggggaaggtaaaacccgtccccacccagtcccaatgccatgcctaat 14892323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 36187618 - 36187693
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||| ||||||| | |||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  36187618 gtaagtatacgagaatcggatatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgcctaat 36187693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 49251126 - 49251201
Alignment:
Q  28 cagtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||| ||||||||||||| | |||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  49251126 cagtatgtatatgagaatcggatatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 49251201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 24710550 - 24710476
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||||||||||||| ||||||  || |||||| ||||||||||||||||||||| || ||||||||||||||    
T  24710550 gtaagtatatgagaatcgggtatggagacggggaaggtaaaacccgtccccaccccgccctattgccatgcctaa 24710476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 17092356 - 17092429
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||| ||||||||||| | |||||||| | |||| ||||||||||||||||||||| ||||||||||||||||    
T  17092356 gtaagcatatgagaatcggatatgaggacgaggaaggtaaaacccgtccccaccccgccccattgccatgccta 17092429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 23966550 - 23966477
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| | |||| ||| |||||| ||||||| ||||||||||||| ||||||||||||||||    
T  23966550 gtaagtatatgagaatcggttatggggacggggaaggtaaaactcgtccccaccccgccccattgccatgccta 23966477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 18354467 - 18354541
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||||||||||||| | |||   || |||||| ||||||||||||||||||||| |||||||||||||||||    
T  18354467 gtaagtatatgagaatcggatatagagacggggaaggtaaaacccgtccccaccccgccccattgccatgcctaa 18354541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 34060411 - 34060484
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||||||||||||  ||||| |||  ||||| ||||||||||||||||||||| ||||||| |||||||||    
T  34060411 taagtatatgagaatcgagtatggggactgggaaggtaaaacccgtccccaccccgccccattgtcatgcctaa 34060484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 51421587 - 51421514
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||||| |||| |||||| |||||||||||||  |||||||| |||||||    
T  51421587 gtaagtatatgagaatcgggtatggggatgaggaaggtaaaatccgtccccaccccaccccattgcgatgccta 51421514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 38686340 - 38686272
Alignment:
Q  35 tatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||| ||| |||||||||| || ||| |||||||||||||| ||||||| ||||||||    
T  38686340 tatatgagaatcagggatggggatggggaaggtgaaatccgtccccaccccgccccattgtcatgccta 38686272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 9983282 - 9983357
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||||| |||||||| ||||||  || |||||||||||||| ||| |||| |||| ||||||||||||||||||    
T  9983282 gtaagtatgtgagaatcgggtatggagacggggaatgtaaaactcgttcccatcccgccccattgccatgcctaat 9983357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 50427050 - 50427125
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||| |||||| |||||| ||| ||||||||  ||||||||||| | |||| |||||||||||    
T  50427050 gtaagtatatgagaatcgggtatggggatggagaaggtaaaacctatccccaccccgcctcattaccatgcctaat 50427125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 5180743 - 5180670
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||  ||| |||||| ||||||| ||||||||||||  |||||||| |||||||    
T  5180743 gtaagtatatgagaatcgggtatagggacggggaaggtaaaactcgtccccaccccaccccattgcaatgccta 5180670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 42440031 - 42440104
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||||||||||| |   |||||| ||||||| ||||| ||||| | ||||||||||||||||    
T  42440031 gtaagtatatgagaatcaggtatgggagcggggaaggtaaaactcgtccacaccctgccccattgccatgccta 42440104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 3628371 - 3628446
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||| |||||||  ||||| ||| |||||| ||||||||||| || |||||| || |||||||||||||||    
T  3628371 gtaagtatacgagaatcgtgtatggggacggggaaggtaaaacccgttcctaccccgccctattgccatgcctaat 3628446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 39615995 - 39615921
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||||| | ||| | || |||||| |||| | ||||||||||| || ||||||||||||||||    
T  39615995 agtaagtatatgagaatcggatataaagacggggaaagtaagatccgtccccaccgcgccccattgccatgccta 39615921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 8880065 - 8880008
Alignment:
Q  48 ggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||||||| |||||  |||||||||||||||| |||| |||||| |||||||||||    
T  8880065 ggtatgaggacggggacggtaaaacccgtccccatcccgccccatttccatgcctaat 8880008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 14890809 - 14890752
Alignment:
Q  48 ggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||| ||| |||||| ||||||||||||||||||| | ||||||| ||||||||||    
T  14890809 ggtatggggacggggaaggtaaaacccgtccccacccagccccattgtcatgcctaat 14890752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 100
Target Start/End: Original strand, 19572923 - 19572966
Alignment:
Q  57 atggggaatgtaaaacccgtccccaccccgtcccattgccatgc 100  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||    
T  19572923 atggggaaggtaaaactcgtccccaccccgccccattgccatgc 19572966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 29871679 - 29871754
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    |||||||||||||||||| ||||||  ||||| |||||||||| ||||| | |||||  | ||||| |||||||||    
T  29871679 agtaagtatatgagaatcgggtatggagatggagaatgtaaaatccgtctctaccccacctcattgtcatgcctaa 29871754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 29936109 - 29936035
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||| ||||||||||| | ||||  || |||||| ||||||| | ||||||||||| ||||||| |||||||||    
T  29936109 gtaagcatatgagaatcggatatgtagacggggaacgtaaaacacatccccaccccgccccattgtcatgcctaa 29936035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 2514340 - 2514275
Alignment:
Q  38 atgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||  |||||||| | |||||||||||||| | |||| ||||||  |||||||||||||||    
T  2514340 atgagaattgggtatgagaacggggaatgtaaaactcatccctaccccgctccattgccatgccta 2514275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 16903178 - 16903129
Alignment:
Q  48 ggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgcca 97  Q
    |||||| |||||||||| |||| || ||||||||||||| ||||||||||    
T  16903178 ggtatggggatggggaaggtaatactcgtccccaccccgccccattgcca 16903129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 35937213 - 35937285
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||  ||| ||||||||||||||  |||| || |||| ||||||| ||||||||    
T  35937213 gtaagtatatgagaatcgggtatagggacggggaatgtaaaacttgtccaca-cccgccccattgacatgccta 35937285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 38093612 - 38093568
Alignment:
Q  59 ggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||||||||| |||| || |||| ||||||||    
T  38093612 ggggaatgtaaaacccgtccccatcccgccctattgacatgccta 38093568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 13830428 - 13830354
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  13830428 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgcctaa 13830354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 15546386 - 15546312
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||||||||||||  |||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  15546386 gtaagtatatgagaatagggtatggggatggggaaggtaaaacccgtccccaccccgacccattgccatgcctaa 15546312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 7315046 - 7315119
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  7315046 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 7315119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 10208826 - 10208899
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||||| | |||||| ||||||||||||||||||||| ||||||||||||||||    
T  10208826 gtaagtatatgagaatcgggtatgagaacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 10208899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 11009132 - 11009205
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| ||||||  |||||||||||||||||||| ||||||||||||||||    
T  11009132 gtaagtatatgagaatcgggtatggggacggggaagataaaacccgtccccaccccgccccattgccatgccta 11009205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 31942551 - 31942624
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||| |||| |||||| ||| |||||||||||||||||||||||||||| ||||||| ||||||||    
T  31942551 gtaagtatatgataatcgggtatggggacggggaatgtaaaacccgtccccaccccgccccattgtcatgccta 31942624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 36128504 - 36128577
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| | |||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  36128504 gtaagtatatgagaatcggatatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 36128577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 6028285 - 6028360
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||| |||| |||||| |||||| ||| |||||||||||||||||||||||||||| |||| |||||||||||||    
T  6028285 gtaaggatataagaatcgggtatggggacggggaatgtaaaacccgtccccaccccgccccaatgccatgcctaat 6028360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 10920355 - 10920281
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||||||||||||  ||||||  |||||||||  |||||||||||||||||||| |||||||||||||||||    
T  10920355 gtaagtatatgagaatagggtatggagatggggaagataaaacccgtccccaccccgccccattgccatgcctaa 10920281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 16227086 - 16227159
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| | | | ||||||||||||    
T  16227086 gtaagtatatgagaatcgggtatggggacggggaatgtaaaacccgtccccaccctgcctcgttgccatgccta 16227159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 37319636 - 37319561
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgt-ccccaccccgtcccattgccatgcctaat 105  Q
    |||||||||||||||| |||||| ||| |||||||||||||| ||| |||||||| ||||||||| ||||||||||    
T  37319636 taagtatatgagaatcgggtatggggacggggaatgtaaaactcgtcccccaccctgtcccattgtcatgcctaat 37319561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 8916355 - 8916399
Alignment:
Q  60 gggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  8916355 gggaatgtaaaacccgtccccaccccgccccattgccatgcctaa 8916399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 9632090 - 9632022
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccat 98  Q
    |||||||||| |||||| |||||| | | |||||| ||||||||||||||||||||| |||||||||||    
T  9632090 gtaagtatataagaatcgggtatgggaacggggaaggtaaaacccgtccccaccccgccccattgccat 9632022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 30846636 - 30846564
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||| |||||| ||| |||||| ||||||  |||||||| |||| ||||||||||||||||    
T  30846636 taagtatatgagaatcgggtatggggacggggaaggtaaaattcgtccccatcccgccccattgccatgccta 30846564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 37473126 - 37473199
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||| ||||||||||  ||| |||||| |||||||||| |||||||| | ||||||| ||||||||    
T  37473126 gtaagtatatgaaaatcaggtatagggacggggaaggtaaaacccgaccccaccctgccccattgacatgccta 37473199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 43371263 - 43371190
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    |||||||||| || | ||| ||| |||||||||| | |||||||||||||||||||  ||||||||||||||||    
T  43371263 taagtatatgggagtaagggatggggatggggaaggcaaaacccgtccccaccccgctccattgccatgcctaa 43371190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 22900479 - 22900423
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccg 86  Q
    ||||||||||||||||  ||||||||||| ||||| ||||||| |||||||||||||    
T  22900479 gtaagtatatgagaatagggtatgaggatagggaaggtaaaactcgtccccaccccg 22900423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 10212131 - 10212076
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccacccc 85  Q
    ||||||||||||||||| || ||| |||||||||| ||||||||||||||| ||||    
T  10212131 gtaagtatatgagaatcggggatggggatggggaaggtaaaacccgtccccgcccc 10212076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 42798386 - 42798460
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||||||||||||||  |||| ||||| |||| |||||||||||||||| ||||  |||||| ||| ||||||    
T  42798386 taagtatatgagaatcatatatggggatgaggaaggtaaaacccgtccccatcccgctccattgacattcctaat 42798460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 4427575 - 4427522
Alignment:
Q  51 atgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    |||||||||||||| | ||||| ||||||||||| | |||||||||||||||||    
T  4427575 atgaggatggggaaggcaaaactcgtccccaccctgccccattgccatgcctaa 4427522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 12194224 - 12194285
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccatt 93  Q
    ||||||||||||||||||| |||  ||| |||||| ||||||||||||||||||||| ||||||    
T  12194224 gtaagtatatgagaatcag-tatagggacggggaa-gtaaaacccgtccccaccccgccccatt 12194285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 18106475 - 18106545
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcc 101  Q
    ||||||||| ||||||| |||||| ||| ||||||  ||||||||||||||| | || ||||||||||||||    
T  18106475 gtaagtatacgagaatcgggtatggggacggggaagataaaacccgtcccca-cacgccccattgccatgcc 18106545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 35248837 - 35248912
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||||| || || | ||||||| ||| |||||| |||||| |||||||||||||| ||| |||||||| |||||    
T  35248837 gtaagtatttgggagtaaggtatggggacggggaaggtaaaatccgtccccaccccgcccctttgccatgtctaat 35248912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 44746500 - 44746567
Alignment:
Q  36 atatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||| | |||||| ||| |||||| |||| || ||| ||||||||| ||||||||||||||||    
T  44746500 atatgagaaccgggtatggggacggggaaggtaacacacgtgcccaccccgccccattgccatgccta 44746567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 3546833 - 3546763
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgc 100  Q
    |||||||||||||| |  || ||| |||||||||| | |||||||||||||||  || |||||||||||||    
T  3546833 gtaagtatatgagagtaggggatggggatggggaaggcaaaacccgtccccacatcgccccattgccatgc 3546763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 34544764 - 34544838
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccacccc-gtcccattgccatgcctaa 104  Q
    |||||||||| || |  |||||| ||| |||| | ||||||| |||||||||||| |||||||||||||||||||    
T  34544764 taagtatatgggagtatggtatgtggacgggggaggtaaaactcgtccccacccccgtcccattgccatgcctaa 34544838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 103
Target Start/End: Complemental strand, 45115252 - 45115218
Alignment:
Q  69 aaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||||| ||||||||||||||||    
T  45115252 aaacccgtccccaccccgccccattgccatgccta 45115218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 105
Target Start/End: Complemental strand, 45256511 - 45256441
Alignment:
Q  35 tatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||||||||  | |||| ||| || |||||||||| ||||| ||||||||  |||||||||||||||||    
T  45256511 tatatgagaattggatatggggacggagaatgtaaaatccgtctccaccccgctccattgccatgcctaat 45256441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 18485300 - 18485251
Alignment:
Q  55 ggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    |||||||||| | ||| |||||||||| |||| |||||||||||||||||    
T  18485300 ggatggggaaggcaaagcccgtccccaacccgccccattgccatgcctaa 18485251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 25210015 - 25209942
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||| | |  |||||||||| | |||| ||||||| ||||| ||||||  ||||||||||||||||    
T  25210015 gtaagtatatgaaagtagggtatgaggacgaggaaggtaaaactcgtcctcaccccaccccattgccatgccta 25209942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 37999177 - 37999105
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||| ||||||||||||  ||||| ||| |||||| |||||| ||||| |||||||  ||||||||||||||||    
T  37999177 gtaattatatgagaatcgagtatggggacggggaaggtaaaa-ccgtctccaccccaccccattgccatgccta 37999105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 14331210 - 14331162
Alignment:
Q  55 ggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||| | |||| ||||||||| |||| ||||||||||||||||    
T  14331210 ggatggggaaggcaaaatccgtccccatcccgccccattgccatgccta 14331162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 24414528 - 24414584
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccg 86  Q
    |||||| |||||||||  |||||| ||| |||||| ||||||| |||||||||||||    
T  24414528 gtaagtgtatgagaatagggtatgtggacggggaaggtaaaactcgtccccaccccg 24414584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 14540 - 14613
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| ||||||||||||| |||||||||||||| ||||||||||||||||    
T  14540 gtaagtatatgagaatcgggtatggggacggggaatgtaaaatccgtccccaccccgccccattgccatgccta 14613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 10072185 - 10072112
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||| ||||||||| ||||||||||||||||    
T  10072185 gtaagtatatgagaatcgggtatggggatggggaaggtaaaacccgttcccaccccgccccattgccatgccta 10072112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 10996243 - 10996316
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||  |||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  10996243 gtaagtatatgagaatagggtatggggatggggaaggtaaaacccgtccccaccccgccccattgccatgccta 10996316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 21702376 - 21702303
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  21702376 gtaagtatatgagaatcgggtatggggatggggaaggtaaaacccgtccccacccctccccattgccatgccta 21702303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 37578960 - 37578887
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||| |||| |||||| ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  37578960 gtaagtatatgataatcgggtatggggatggggaatgtaaaatccatccccaccccgtcccattgccatgccta 37578887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 25905326 - 25905250
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||||||||||||||||||||||   | |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  25905326 agtaagtatatgagaatcaggtatggaaacggggaaggtaaaacccgtccccaccccgccccattgccatgcctaat 25905250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 5916471 - 5916546
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    |||||| |||||||||||| |||||||||||||||||||||||| ||||||||||| | |||||||| ||||||||    
T  5916471 agtaaggatatgagaatcatgtatgaggatggggaatgtaaaactcgtccccaccctgccccattgctatgcctaa 5916546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 43507130 - 43507055
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||| |||||| | | |||||| |||||||||||||||||| |||||||||||||||||||||    
T  43507130 gtaagtatatgagaatcgggtatgggaacggggaaggtaaaacccgtccccacctcgtcccattgccatgcctaat 43507055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 2632364 - 2632436
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||||||||| | ||||||||||||||||    
T  2632364 gtaagtatatgagaatcaggtatg-ggacggagaatgtaaaacccgtccccaccctgccccattgccatgccta 2632436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 30650327 - 30650254
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| ||||||  ||||||||| ||||||||||||||| ||||| ||||||||||||||||    
T  30650327 gtaagtatatgagaatcgggtatggagatggggaaggtaaaacccgtcccctccccgccccattgccatgccta 30650254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 17851562 - 17851488
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||||||||||||| |||||| ||| |||||| |||||||  |||||||||||| |||||||||||||||||    
T  17851562 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacttgtccccaccccgccccattgccatgcctaa 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 16865866 - 16865793
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||| |||| |||||| ||||| |||| |||||||||||||||||| || ||||||||||||||||    
T  16865866 gtaagtatatgataatcgggtatggggatgaggaaggtaaaacccgtccccacctcgccccattgccatgccta 16865793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 35074165 - 35074093
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| | | |||||| ||||||||||||||||||||| ||||||||||||||||    
T  35074165 gtaagtatatgagaatcgggtatg-gaacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 35074093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 7779703 - 7779631
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||| ||||||| |||||| ||| |||||| ||||||||||||||||||||  ||||||||||||||||    
T  7779703 taagtatacgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccaccccattgccatgccta 7779631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 24425142 - 24425071
Alignment:
Q  32 aagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||||||||||| | |||| |||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  24425142 aagtatatgagaatcggatatggggatggggaatgtaaaactcgtcctcaccccg-cccattgccatgcctaa 24425071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 18125623 - 18125698
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    |||||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||  ||||||||||||||||    
T  18125623 agtaagtatatgagaatcgggtatgggaacagggaaggtaaaacccgtccccaccccgctccattgccatgcctaa 18125698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 37196384 - 37196447
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccatt 93  Q
    ||||||||| |||||||||||||||||| ||| || ||||||||||||||||||||| ||||||    
T  37196384 gtaagtatacgagaatcaggtatgaggacgggaaaggtaaaacccgtccccaccccgccccatt 37196447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 29292297 - 29292251
Alignment:
Q  57 atggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  29292297 atggggaaggtaaaacccgtccccaccccgtcccattgccatgccta 29292251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 16075392 - 16075319
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtcccca-ccccgtcccattgccatgccta 103  Q
    |||||||||||||||| | |||| ||| |||||||||||||||| |||||| ||||| ||||||||||||||||    
T  16075392 taagtatatgagaatcggatatggggacggggaatgtaaaacccttccccacccccgccccattgccatgccta 16075319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 33840771 - 33840698
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||  || ||| |||||| ||| ||||||||||||||||||||| ||||||||||| ||||    
T  33840771 gtaagtatatgagaatatggcatggggatggagaaggtaaaacccgtccccaccccgccccattgccataccta 33840698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 38152597 - 38152524
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||||  ||||| | | |||||| ||||||||||||||||||||| ||||||| ||||||||    
T  38152597 gtaagtatatgagaatcgagtatgggaacggggaaggtaaaacccgtccccaccccgccccattgtcatgccta 38152524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 39316691 - 39316618
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||| |||||||||||| |||||| | |||||||| ||||||||| |||||||||||  |||||||||||||||    
T  39316691 gtaaatatatgagaatcgggtatgggaatggggaaggtaaaacccatccccaccccgctccattgccatgccta 39316618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 44658637 - 44658709
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||| |||| |||| | |||  ||||| ||||||||||||||||||||| ||||||||||||||||    
T  44658637 taagtatatgataatcgggtacggggacagggaaggtaaaacccgtccccaccccgccccattgccatgccta 44658709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 5567537 - 5567612
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||  |||||| ||| |||| | ||||||| | ||||||||||| ||||||||||||||||||    
T  5567537 gtaagtatatgagaatagggtatggggacgggggaggtaaaactcatccccaccccgccccattgccatgcctaat 5567612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 45886161 - 45886236
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||  ||||||  || |||||| ||||||||| || |||||||| ||||||||||||||||||    
T  45886161 gtaagtatatgagaattgggtatggagacggggaaggtaaaacccatctccaccccgccccattgccatgcctaat 45886236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 3920236 - 3920162
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||| ||| |||  | |||||| ||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  3920236 agtaagtatttgaaaattggatatgagaatgaggaatgtaaaacccatccccaccccgccccattgccatgccta 3920162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 24752729 - 24752655
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||||||||||||| | |||||| |||| ||| ||||||||||||| ||||||  ||||||| ||||||||||    
T  24752729 taagtatatgagaatcggatatgagaatggagaaggtaaaacccgtcctcaccccaccccattgtcatgcctaat 24752655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 18826266 - 18826338
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| |  ||||||||||||| | ||||||||| ||||||||||||||||    
T  18826266 gtaagtatatgagaatcgggtatggggacgaagaatgtaaaaccc-ttcccaccccgccccattgccatgccta 18826338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 44986293 - 44986366
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||| |||||||| |||| ||||||| ||| ||||    
T  44986293 gtaagtatatgagaatcgggtatggggacggggaaggtaaaactcgtccccatcccgccccattgtcataccta 44986366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 46127559 - 46127632
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||  ||||||  |||||||||||||||| ||||||  |||||| |||||| |||||||||    
T  46127559 gtaagtatatgagaattgggtatggagatggggaatgtaaaatccgtccttaccccgccccattaccatgccta 46127632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 3227938 - 3228010
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||| ||||||||| | |||| ||| |||||  ||||||||||||||||||||| ||||||||||| ||||    
T  3227938 taagtagatgagaatcggatatggggacggggagggtaaaacccgtccccaccccgccccattgccataccta 3228010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 42005598 - 42005542
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccg 86  Q
    |||| ||||||||||||||||||| |||||| |||  ||||||||||||||||||||    
T  42005598 gtaaatatatgagaatcaggtatggggatggagaagataaaacccgtccccaccccg 42005542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 25980320 - 25980394
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||| ||| || ||| ||| || ||||||||| ||||||||||  ||||||||||||||||||    
T  25980320 gtaagtatatgagaatcgggtttggggacggg-aaggtaaaacccatccccaccccaccccattgccatgcctaat 25980394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 5432461 - 5432507
Alignment:
Q  59 ggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||||||    
T  5432461 ggggaaggtaaaacccgtccacaccccgccccattgccatgcctaat 5432507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 25783297 - 25783365
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatg 99  Q
    |||||||||||||||||||||||| |||  ||||||||||||  ||| ||||||||| ||||||| ||||    
T  25783297 gtaagtatatgagaatcaggtatggggacagggaatgtaaaattcgt-cccaccccgccccattgtcatg 25783365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 27850719 - 27850792
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||| |||||||||  ||||||  || |||||||||||||| |||||||| | |||||||||| ||||||||    
T  27850719 gtaagtgtatgagaattgggtatggagacggggaatgtaaaactcgtccccatctcgtcccattgtcatgccta 27850792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 38140186 - 38140259
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||| | | |||| | | | |||| ||||||| ||||||||||||| ||||||||||||||||    
T  38140186 gtaagtatatgagaaccggatatgggtacgaggaaggtaaaactcgtccccaccccgccccattgccatgccta 38140259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 27062679 - 27062755
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||| |  || | | ||||| |||| | ||||||||||||||||||| ||||| ||||||||||||    
T  27062679 agtaagtatatgagagtaggggacggggatgaggaaggcaaaacccgtccccaccccgccccatcgccatgcctaat 27062755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 42908472 - 42908520
Alignment:
Q  55 ggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||| | ||||||||||||||||||| ||||||| ||||||||    
T  42908472 ggatggggaaggcaaaacccgtccccaccccgccccattgtcatgccta 42908520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 43550903 - 43550947
Alignment:
Q  59 ggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||    
T  43550903 ggggaaggtaaaacccgtccccactccgccccattgccatgccta 43550947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 39456392 - 39456447
Alignment:
Q  50 tatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||||| |||||| ||||||| |||||||||||   ||||||||||||||||||    
T  39456392 tatgaggacggggaaggtaaaactcgtccccaccctaccccattgccatgcctaat 39456447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 41103340 - 41103266
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||| ||||||||||| |||||| ||| || ||| |||||||| |||||| ||| | |||||||| ||||||||    
T  41103340 gtaagcatatgagaatcgggtatggggacggagaaggtaaaacctgtccccgccctgccccattgctatgcctaa 41103266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 27062824 - 27062768
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccacccc 85  Q
    ||||||||||||||| |  || |||||||||||||| | ||||||||||||| ||||    
T  27062824 agtaagtatatgagagtaggggatgaggatggggaaggaaaaacccgtccccgcccc 27062768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 15889903 - 15889830
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| | |||| |||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  15889903 gtaagtatatgagaatcggttatggggatggggaaggtaaaacccgtccccaccccgccccattgccatgccta 15889830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 6093501 - 6093577
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||||||||||||||| ||||||| |||||||||  ||||||||||||||| |||| ||||||||||||||||||    
T  6093501 agtaagtatatgagaatcgggtatgaagatggggaagataaaacccgtccccatcccgccccattgccatgcctaat 6093577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 40517499 - 40517425
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||| ||||||||||| |||||||||||||||||    
T  40517499 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccatccccaccccgccccattgccatgcctaa 40517425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 17853676 - 17853749
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||| | ||||||||||||||||    
T  17853676 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccctgacccattgccatgccta 17853749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 30996290 - 30996217
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||| |||||||||||| |||||||||| || ||| ||||||||||||||||||||| ||||||||||||||||    
T  30996290 gtaaatatatgagaatcgggtatgaggacggagaaggtaaaacccgtccccaccccgccccattgccatgccta 30996217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 1218479 - 1218409
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgc 100  Q
    ||||||||||||||||| |||||| ||| |||||| |||||||||||||||||||||  ||||||||||||    
T  1218479 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgctccattgccatgc 1218409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 33862585 - 33862659
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||| ||||||||||||| |||||| ||| |||||||||||||||||||||||||||| | ||||| ||||||||    
T  33862585 agtatgtatatgagaatcgggtatggggacggggaatgtaaaacccgtccccaccccgcctcattgtcatgccta 33862659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 12447074 - 12447002
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||| ||||||| |||| ||| ||||||||||||||||||||||| |||| ||||||||||||||||    
T  12447074 gtaagtatatgtgaatcagatatggggacggggaatgtaaaacccgtcccca-cccgccccattgccatgccta 12447002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 35311509 - 35311436
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| | |||| |||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  35311509 gtaagtatatgagaatcggatatggggatggagaaggtaaaatccgtccgcaccccgtcccattgccatgccta 35311436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 3565116 - 3565186
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcc 101  Q
    ||||||||||||||||| |||||| ||| ||| || ||||||||||||||||||||| ||||||||||||||    
T  3565116 gtaagtatatgagaatcgggtatggggacggg-aaggtaaaacccgtccccaccccgccccattgccatgcc 3565186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 38006868 - 38006942
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||| |||||| |||||| | | |||||||||||||||||||||||||||  |||||||||||| |||||    
T  38006868 taagtatataagaatcgggtatgggaacggggaatgtaaaacccgtccccaccccaccccattgccatgtctaat 38006942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 20973882 - 20973955
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||| |||||||| |||| ||| |||||| ||||||||||||||||||||  || |||||||||||||    
T  20973882 gtaagtatataagaatcagttatggggacggggaaggtaaaacccgtccccacccctcccaattgccatgccta 20973955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 4582906 - 4582839
Alignment:
Q  36 atatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||  |||||  || |||||| ||||||||||||||||||||| ||||||||||||||||    
T  4582906 atatgagaatcgagtatggagacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 4582839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 22695297 - 22695371
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||||  |||||  ||| |||||| ||||||||||||||||||||| ||||||| ||| ||||    
T  22695297 agtaagtatatgagaattgggtatagggacggggaaggtaaaacccgtccccaccccgccccattgtcattccta 22695371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 24207333 - 24207259
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||| |  | |||| ||||| |||| ||||||||| ||||||||||| ||||||||||||||||    
T  24207333 agtaagtatatgagagtaggatatggggatgaggaaggtaaaacccatccccaccccgccccattgccatgccta 24207259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 42987874 - 42987944
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||| ||||||| |||||| ||| |||||| |||| ||||||||||||||   ||||||||||||||||    
T  42987874 gtaagtatacgagaatcgggtatggggacggggaaggtaatacccgtccccaccc---cccattgccatgccta 42987944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 2413116 - 2413189
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccacc-ccgtcccattgccatgccta 103  Q
    ||||||||| |||||| | |||||||| || ||||||||||| |||||||||| ||| ||||||| ||||||||    
T  2413116 taagtatataagaatcggatatgaggacggagaatgtaaaactcgtccccacctccgccccattgtcatgccta 2413189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 4920524 - 4920456
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatg 99  Q
    |||||||||||| |||| |||||  |||| ||||| |||||||||||||||| ||||| |||||||||||    
T  4920524 gtaagtatatgataatcgggtatagggatagggaaggtaaaacccgtccccatcccgt-ccattgccatg 4920456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 10126798 - 10126726
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||||  | |||||  ||||||| ||||||||||||| ||||||| ||||||||    
T  10126798 gtaagtatatgagaatcgggtatgaaaacggggag-gtaaaactcgtccccaccccgccccattgtcatgccta 10126726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 13402400 - 13402473
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||| |||||||| |||| ||| ||| || |||||| | ||||||||  |||||||||||||||||||    
T  13402400 gtaagtatataagaatcagatatggggacgggaaaggtaaaatctgtccccacttcgtcccattgccatgccta 13402473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 27088748 - 27088821
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||| ||||| | |||| |||||||||| ||||||||||||| ||||||||||||   |||| |||||||||||    
T  27088748 gtaaatatattaaaatcgggtatgaggaaggggaatgtaaaatccgtccccaccctcccccaatgccatgccta 27088821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 28045344 - 28045271
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||||   |||| ||||||| || |||||||||||||||||| ||  |||||| ||||||||    
T  28045344 gtaagtatatgagaatcgaatatggggatgggaaaggtaaaacccgtccccaccgcgcaccattgtcatgccta 28045271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 30115187 - 30115118
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatg 99  Q
    ||||||||||||||||| | |||| | | |||||||||||||||||| ||||||||| || |||| ||||    
T  30115187 gtaagtatatgagaatcggatatgggaacggggaatgtaaaacccgttcccaccccgccctattgtcatg 30115118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 3572915 - 3572843
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||||||||| ||| ||  |||||||||| | |||||||| |  ||||||| ||||||||    
T  3572915 taagtatatgagaatcaggtatggggacggaaaatgtaaaactcatccccacctcaccccattgtcatgccta 3572843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 12235850 - 12235802
Alignment:
Q  55 ggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||| | ||||||||| ||||||||| ||||||||||||||||    
T  12235850 ggatggggaaggcaaaacccgttcccaccccgccccattgccatgccta 12235802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 27900891 - 27900931
Alignment:
Q  63 aatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  27900891 aatgtaaaatccgtccccaccccgccccattgccatgccta 27900931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 33420582 - 33420654
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||| |||||| | |||| ||| | ||||||||||||||||||| | |||| |||| |||||||||||    
T  33420582 taagtatattagaatcggatatggggacgtggaatgtaaaacccgtccctatcccgccccaatgccatgccta 33420654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 5909079 - 5909126
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtc 77  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||||    
T  5909079 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtc 5909126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 23045410 - 23045485
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||| || |  || ||| ||||||||||   ||||||||||||||||||| |||||| |||||||||||    
T  23045410 gtaagtatatgggagtaggggatggggatggggaagacaaaacccgtccccaccccgccccattaccatgcctaat 23045485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 6156307 - 6156379
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||| |||| | |||||| ||| |||||| |||||||  |||||||||| | ||||||||||||||||    
T  6156307 gtaagtatataagaaacgggtatggggacggggaaggtaaaacttgtccccaccc-gccccattgccatgccta 6156379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 12712946 - 12712995
Alignment:
Q  54 aggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||   ||||||||||||||||||| ||||||||||| ||||    
T  12712946 aggatggggaagacaaaacccgtccccaccccgccccattgccataccta 12712995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 12774210 - 12774259
Alignment:
Q  54 aggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||   ||||||||||||||||||| ||||||||||| ||||    
T  12774210 aggatggggaagacaaaacccgtccccaccccgccccattgccataccta 12774259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 28569560 - 28569609
Alignment:
Q  55 ggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    |||||||||| || ||||| |||||||||||| ||||||| |||||||||    
T  28569560 ggatggggaaggtgaaacctgtccccaccccgccccattgtcatgcctaa 28569609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 2680863 - 2680815
Alignment:
Q  55 ggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||| | ||||||||||||||||||| | ||||||||| ||||    
T  2680863 ggatggggaaggcaaaacccgtccccaccccgccgcattgccataccta 2680815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 10822935 - 10823006
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcct 102  Q
    |||||||||||| |||  | |||| |||||||||  |||||| |||||||||||||| ||||||| |||||||    
T  10822935 gtaagtatatgataataggatatggggatggggag-gtaaaaaccgtccccaccccgccccattgtcatgcct 10823006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 12866950 - 12867018
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatg 99  Q
    ||||||||||||||||  ||||  | | |||||| ||||| |||||||| |||||| ||||||||||||    
T  12866950 taagtatatgagaatcgagtataggaacggggaaggtaaaccccgtcccaaccccgccccattgccatg 12867018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 1337071 - 1336999
Alignment:
Q  178 ggatatcgaggtttctagatgcttctagaaggcttcaaaggtggtgcctgtttagaggtttcctaaggtctca 250  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  1337071 ggatatcgggatttctagatgcttctagaaggcttcaaagatggtgcctgcttagaggttgcctaaggtctca 1336999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 39655659 - 39655734
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||||||||||||||||| ||||| ||| |||||| |||||| |||||||||||||| ||||||||||||||||||    
T  39655659 gtaagtatatgagaatcatgtatggggacggggaaggtaaaaaccgtccccaccccgccccattgccatgcctaat 39655734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 44162476 - 44162401
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  44162476 gtaagtatatgagaatcgggtatggggacggggaaggtaaaactcgtccccaccccgccccattgccatgcctaat 44162401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 30616699 - 30616773
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||||  |||||| |||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  30616699 agtaagtatatgagaatagggtatggggatggggatggtaaaacccgtccccaccccgccccattgccatgccta 30616773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 6738768 - 6738841
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| | | |||||| ||||||||||||||||||||| ||||||||||||||||    
T  6738768 gtaagtatatgagaatcgggtatgggaacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 6738841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 29284027 - 29283955
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||||||| || ||| ||||||||||||||||||||| ||||||||||||||||    
T  29284027 gtaagtatatgagaatcgggtatgaggacggagaaggtaaaacccgtccccaccccg-cccattgccatgccta 29283955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 39728374 - 39728301
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||| ||||||||||||| ||||||||||||||||    
T  39728374 gtaagtatatgagaatcgggtatggggacggggaaggtaaaactcgtccccaccccgccccattgccatgccta 39728301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 44107195 - 44107268
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||||||| |||||| ||||||| |||||||||||||  |||||||||||||||    
T  44107195 gtaagtatatgagaatcgggtatgaggacggggaaggtaaaactcgtccccaccccgctccattgccatgccta 44107268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 49579756 - 49579683
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||| |||||||||||||||| ||| |||||| ||||||||||||||||| ||| ||||||||||||||||    
T  49579756 gtaagtacatgagaatcaggtatggggacggggaaggtaaaacccgtccccactccgccccattgccatgccta 49579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 23547375 - 23547447
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||| |||||| ||| ||||||  |||||||||||||||||||| ||||||||||||||||    
T  23547375 taagtatatgagaatcgggtatggggacggggaagataaaacccgtccccaccccgccccattgccatgccta 23547447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 41937445 - 41937521
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaatg 106  Q
    |||| |||||||||||| ||||||  || |||||||||||||||||||||||||||  |||||||||||||||||||    
T  41937445 gtaaatatatgagaatcgggtatggagacggggaatgtaaaacccgtccccaccccaccccattgccatgcctaatg 41937521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 7470174 - 7470248
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||| |||||| ||| ||| || ||||||||||||||||||||| ||||||||||||||||||    
T  7470174 gtaagtatatgagaatcgggtatggggacggg-aaggtaaaacccgtccccaccccgccccattgccatgcctaat 7470248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 42758092 - 42758017
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||| ||||||   ||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  42758092 gtaagtatatgagaatcgggtatggaaatggggaatgtaaaacccgtccccacctcgccccattgtcatgcctaat 42758017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 44638967 - 44638892
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||| | ||||| ||||||||||    
T  44638967 gtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccacattgtcatgcctaat 44638892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 34154108 - 34154030
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaatgct 108  Q
    ||||||||||| ||||| |||| | ||| |||||| ||||||||||||||||||||| ||||||| |||||||||||||    
T  34154108 gtaagtatatgtgaatcgggtacggggacggggaaggtaaaacccgtccccaccccgccccattgtcatgcctaatgct 34154030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 34025651 - 34025578
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||||||||||| ||| || ||| |||||| |||||||||| ||| ||||||||||||||||    
T  34025651 gtaagtatatgagaatcaggtatggggacggagaaggtaaaatccgtccccactccgccccattgccatgccta 34025578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 48391206 - 48391279
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |  ||| |||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  48391206 gtaagtatatgagaatcggacatggggatggggagggtaaaacccgtccccaccccgccccattgccatgccta 48391279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 23580519 - 23580447
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| ||| || |||||||||||||||||||| ||| |||||||||||||    
T  23580519 gtaagtatatgagaatcgggtatggggacggg-aaggtaaaacccgtccccaccccatcctattgccatgccta 23580447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 44252433 - 44252360
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||| |||||| ||| ||| || ||||||| ||||||||||| | ||||||||||||||||    
T  44252433 gtaagtatatgagaatcgggtatggggacgggaaaggtaaaactcgtccccaccctgccccattgccatgccta 44252360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 4016434 - 4016502
Alignment:
Q  35 tatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||| |||||| |||||| ||| |||||||| ||||||||||||||||||| ||||||| ||||||||    
T  4016434 tatataagaatctggtatggggacggggaatgcaaaacccgtccccaccccgccccattgtcatgccta 4016502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 23154404 - 23154476
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||| ||||| || | |||||| ||||||||||||||||||||  || |||||||||||||    
T  23154404 taagtatatgagaatcgggtataagaacggggaaggtaaaacccgtccccaccccaccctattgccatgccta 23154476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 4557701 - 4557776
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    |||| |||||||||||| |||||| |||||||||||| |||||| |||||||| ||| |||||||  |||||||||    
T  4557701 gtaaatatatgagaatcgggtatggggatggggaatgcaaaacctgtccccactccgccccattgttatgcctaat 4557776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 19111428 - 19111358
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgc 100  Q
    ||||||||||||||| | |||||| ||| | |||||||||||||||||||| || || |||||||||||||    
T  19111428 gtaagtatatgagaaccgggtatggggacgaggaatgtaaaacccgtcccctccacgccccattgccatgc 19111358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 31127191 - 31127261
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgc 100  Q
    ||||||||||||||||| |||||| ||| |||||||||||||| | |||||||||||  || |||||||||    
T  31127191 gtaagtatatgagaatcgggtatggggacggggaatgtaaaactcatccccaccccgctccgttgccatgc 31127261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 49025374 - 49025325
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccc 79  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  49025374 gtaagtatatgagaatcgggtatgaggacggggaaggtaaaacccgtccc 49025325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 29858579 - 29858643
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgc 95  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||||| || |||  ||||||||    
T  29858579 taagtatatgagaatcgggtatggggatggggaaggtaaaacccgtccacatcccaccccattgc 29858643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 17146546 - 17146611
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccat 98  Q
    ||||||||||||||||| |||||| ||| ||||||   ||||||||||||||||||| | |||||||||    
T  17146546 gtaagtatatgagaatcgggtatggggacggggaa---aaaacccgtccccaccccgcctcattgccat 17146611  T

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Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 20086703 - 20086633
Alignment:
Q  34 gtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    |||||| |||||| |||||| ||| |||||| ||||||| | ||||||||| | |||||||||||||||||    
T  20086703 gtatattagaatctggtatggggacggggaaggtaaaactcatccccacccagccccattgccatgcctaa 20086633  T

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Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 43582270 - 43582197
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||  |||||||| ||||  ||||||||| ||||||| |||||||| ||||||| |||||||||||||    
T  43582270 agtaagtatacaagaatcagatatggagatggggaaggtaaaactcgtcccca-cccgtccaattgccatgccta 43582197  T

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Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 54316835 - 54316786
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccc 79  Q
    |||| |||||||||||| |||||| |||||| ||||||||||||||||||    
T  54316835 gtaaatatatgagaatcgggtatggggatggagaatgtaaaacccgtccc 54316786  T

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Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 55439075 - 55439144
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatg 99  Q
    ||||||||||||||||| | |||| ||| | ||||||||||||||||  ||||| || ||||||||||||    
T  55439075 gtaagtatatgagaatcggatatggggacgaggaatgtaaaacccgtatccacctcgccccattgccatg 55439144  T

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Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 1722658 - 1722591
Alignment:
Q  35 tatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||| |||||||  ||| |||| |||||||||||||||| |||| ||||||||||| ||||    
T  1722658 tatatgagaatctggtatgaaaatgaggaacgtaaaacccgtcccca-cccgccccattgccataccta 1722591  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 773269 - 773303
Alignment:
Q  52 tgaggatggggaatgtaaaacccgtccccaccccg 86  Q
    ||||||||||||| |||||||||||||||||||||    
T  773269 tgaggatggggaaggtaaaacccgtccccaccccg 773303  T

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Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 48306932 - 48307006
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaa 104  Q
    |||| ||||| |||||| | ||||  || |||||| |||||||||||||||||| |  |||||||||||||||||    
T  48306932 gtaaatatataagaatcggatatggagacggggaaggtaaaacccgtccccaccacaccccattgccatgcctaa 48307006  T

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Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 27252204 - 27252163
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaac 72  Q
    ||||||||||||||| ||||||| |||||||||||| |||||    
T  27252204 taagtatatgagaataaggtatggggatggggaatgaaaaac 27252163  T

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Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 830714 - 830642
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccacccc-gtcccattgccatgcc 101  Q
    |||||||||||| |||| |  |||  ||| ||||||||||||||||||||||||||  |||| ||||||||||    
T  830714 gtaagtatatgaaaatcggagatggagattgggaatgtaaaacccgtccccacccctctcccgttgccatgcc 830642  T

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Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 2487446 - 2487402
Alignment:
Q  59 ggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||| || ||||||||||||||||||  |||||||||||||||    
T  2487446 ggggaaggtgaaacccgtccccaccccgctccattgccatgccta 2487402  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 22536241 - 22536312
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||| ||||||||||||| |||  ||| |||||| ||||||||||||| || |||| ||||||||||| ||||    
T  22536241 taagcatatgagaatcagatatagggacggggaaggtaaaacccgtccaca-cccgccccattgccataccta 22536312  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 44953847 - 44953883
Alignment:
Q  67 taaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  44953847 taaaacccgtccccaccccgccccattgtcatgccta 44953883  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 53631592 - 53631540
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccacc 83  Q
    ||||||||| ||||||||||||||| | | |||||||||||| ||| ||||||    
T  53631592 taagtatataagaatcaggtatgagaacgaggaatgtaaaactcgtacccacc 53631540  T

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Target: scaffold0022 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 90289 - 90216
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||||||||||  || || |||||||||||||||||||| |||  ||||||||||||||||    
T  90289 gtaagtatatgagaatcaggtatgctgacggagaatgtaaaacccgtccccatcccaccccattgccatgccta 90216  T

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Target: scaffold1630 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1630
Description:

Target: scaffold1630; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 1314 - 1242
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    ||||||||||||||||||  ||| ||| |||||| ||||||||||||||||||||  || |||||||||||||    
T  1314 taagtatatgagaatcagacatggggacggggaaggtaaaacccgtccccaccccacccaattgccatgccta 1242  T

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Target: scaffold0189 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 3951 - 3875
Alignment:
Q  29 agtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||| |||||||||||| |||||| ||| || ||| |||||| |||||||||||| | ||||||||||||||||||    
T  3951 agtaaatatatgagaatcgggtatggggacggagaaggtaaaatccgtccccacccggccccattgccatgcctaat 3875  T

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Target: scaffold0095 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 32920 - 32983
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccatt 93  Q
    |||||||||||||||||||||||| ||| || ||| ||||||| ||||||||||||| ||||||    
T  32920 gtaagtatatgagaatcaggtatggggacggagaaggtaaaactcgtccccaccccgccccatt 32983  T

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Target: scaffold0198 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 3750 - 3805
Alignment:
Q  48 ggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||| ||| |||||| ||||||||||||||||||||| | ||||||||||||||    
T  3750 ggtatggggacggggaaggtaaaacccgtccccaccccgcctcattgccatgccta 3805  T

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Target: scaffold0519 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 9993 - 9919
Alignment:
Q  31 taagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgcctaat 105  Q
    ||||||||||||||| | |||||  || |||||| ||||||| ||||||||||||  ||||||| ||||||||||    
T  9993 taagtatatgagaattatgtatggagacggggaaggtaaaacacgtccccaccccaccccattgtcatgcctaat 9919  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 128528 - 128576
Alignment:
Q  55 ggatggggaatgtaaaacccgtccccaccccgtcccattgccatgccta 103  Q
    |||||||||| | ||||| ||||||||||||| ||||||||||||||||    
T  128528 ggatggggaaggcaaaactcgtccccaccccgccccattgccatgccta 128576  T

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Target: scaffold0097 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 33276 - 33206
Alignment:
Q  30 gtaagtatatgagaatcaggtatgaggatggggaatgtaaaacccgtccccaccccgtcccattgccatgc 100  Q
    |||||||||||| |||| |||||| |||   ||||||||||||||||| ||||| || | |||||||||||    
T  33276 gtaagtatatgataatcgggtatggggacaaggaatgtaaaacccgtctccacctcgcctcattgccatgc 33206  T

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Target: scaffold0184 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 2607 - 2567
Alignment:
Q  68 aaaacccgtccccaccccgtcccattgccatgcctaatgct 108  Q
    ||||||||| ||||| ||| |||||||||||||||||||||    
T  2607 aaaacccgttcccactccgccccattgccatgcctaatgct 2567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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