View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0936_low_4 (Length: 510)

Name: NF0936_low_4
Description: NF0936
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0936_low_4
NF0936_low_4
[»] chr7 (50 HSPs)
chr7 (136-499)||(42331809-42332192)
chr7 (366-492)||(32873738-32873864)
chr7 (366-495)||(11321851-11321980)
chr7 (366-495)||(3922669-3922798)
chr7 (366-495)||(10932523-10932652)
chr7 (366-495)||(36769535-36769664)
chr7 (366-495)||(40753155-40753284)
chr7 (366-495)||(47953190-47953319)
chr7 (366-482)||(329470-329586)
chr7 (375-491)||(1870144-1870260)
chr7 (366-482)||(21784871-21784987)
chr7 (366-473)||(18470684-18470791)
chr7 (366-444)||(18386525-18386603)
chr7 (366-444)||(46633697-46633775)
chr7 (366-495)||(26371775-26371904)
chr7 (366-495)||(47316664-47316793)
chr7 (366-482)||(26994204-26994320)
chr7 (366-482)||(29661323-29661439)
chr7 (386-482)||(41211179-41211275)
chr7 (366-482)||(44748695-44748811)
chr7 (393-472)||(41665564-41665643)
chr7 (366-444)||(9913525-9913603)
chr7 (366-444)||(9927213-9927291)
chr7 (375-473)||(43189230-43189328)
chr7 (366-495)||(43158652-43158781)
chr7 (366-473)||(30849234-30849341)
chr7 (366-495)||(20127289-20127418)
chr7 (366-495)||(38301343-38301471)
chr7 (375-495)||(30598974-30599094)
chr7 (366-430)||(47947760-47947824)
chr7 (366-482)||(48445521-48445637)
chr7 (366-496)||(15035218-15035348)
chr7 (366-440)||(26652866-26652940)
chr7 (366-440)||(34295425-34295499)
chr7 (30-75)||(42331700-42331748)
chr7 (386-439)||(21133392-21133445)
chr7 (366-451)||(22631738-22631823)
chr7 (393-482)||(23349270-23349359)
chr7 (393-482)||(34519535-34519624)
chr7 (363-424)||(38360068-38360129)
chr7 (386-451)||(43213935-43214000)
chr7 (366-482)||(3892005-3892121)
chr7 (366-482)||(43368201-43368317)
chr7 (401-440)||(1363671-1363710)
chr7 (366-473)||(48894717-48894824)
chr7 (340-374)||(30260011-30260045)
chr7 (386-468)||(48699418-48699500)
chr7 (401-482)||(26910389-26910470)
chr7 (366-427)||(29992729-29992789)
chr7 (307-371)||(43214032-43214096)
[»] chr2 (51 HSPs)
chr2 (366-495)||(33366606-33366735)
chr2 (366-473)||(32497911-32498018)
chr2 (366-500)||(33889239-33889373)
chr2 (366-482)||(7761551-7761667)
chr2 (366-482)||(19513667-19513783)
chr2 (365-495)||(7258891-7259022)
chr2 (366-488)||(16104270-16104392)
chr2 (366-482)||(12939278-12939394)
chr2 (366-441)||(30326350-30326425)
chr2 (366-444)||(9717220-9717298)
chr2 (366-495)||(17540710-17540840)
chr2 (365-491)||(26418918-26419044)
chr2 (366-495)||(35114781-35114910)
chr2 (366-495)||(37308651-37308780)
chr2 (366-479)||(41934577-41934690)
chr2 (366-482)||(5278812-5278928)
chr2 (366-482)||(40832447-40832563)
chr2 (366-444)||(30798505-30798583)
chr2 (366-444)||(37003884-37003962)
chr2 (366-495)||(9732895-9733024)
chr2 (366-495)||(18685832-18685961)
chr2 (366-495)||(34338806-34338935)
chr2 (375-495)||(11114877-11114997)
chr2 (366-482)||(44284625-44284741)
chr2 (366-441)||(2086068-2086143)
chr2 (363-470)||(41366100-41366207)
chr2 (375-482)||(42365582-42365689)
chr2 (393-471)||(28824546-28824624)
chr2 (366-444)||(42706355-42706433)
chr2 (366-470)||(2645076-2645180)
chr2 (391-495)||(16177848-16177952)
chr2 (366-444)||(4641512-4641590)
chr2 (393-482)||(38993049-38993138)
chr2 (386-482)||(6896184-6896280)
chr2 (400-496)||(38623268-38623364)
chr2 (366-430)||(39461310-39461374)
chr2 (366-473)||(13829434-13829541)
chr2 (391-482)||(26981687-26981778)
chr2 (386-444)||(3913476-3913534)
chr2 (366-444)||(12672490-12672568)
chr2 (375-472)||(10399858-10399955)
chr2 (365-418)||(18793303-18793356)
chr2 (366-482)||(32766482-32766599)
chr2 (343-435)||(2394243-2394335)
chr2 (420-500)||(15303200-15303280)
chr2 (394-473)||(1247171-1247250)
chr2 (330-468)||(16062085-16062223)
chr2 (312-371)||(27462906-27462965)
chr2 (394-473)||(40692321-40692400)
chr2 (369-439)||(18127009-18127079)
chr2 (366-428)||(26796225-26796286)
[»] chr1 (59 HSPs)
chr1 (366-491)||(26764839-26764964)
chr1 (366-495)||(16386859-16386988)
chr1 (366-482)||(50382456-50382572)
chr1 (366-495)||(844764-844893)
chr1 (366-495)||(16437367-16437496)
chr1 (368-500)||(41972918-41973050)
chr1 (366-495)||(6711086-6711215)
chr1 (366-495)||(12890243-12890372)
chr1 (366-495)||(26118255-26118384)
chr1 (366-495)||(45490915-45491044)
chr1 (366-482)||(28340356-28340472)
chr1 (366-482)||(30105733-30105849)
chr1 (363-495)||(32289384-32289516)
chr1 (375-482)||(17887962-17888069)
chr1 (366-473)||(42510530-42510637)
chr1 (366-472)||(1351498-1351604)
chr1 (375-473)||(6029363-6029461)
chr1 (366-495)||(16451132-16451261)
chr1 (366-495)||(50540349-50540478)
chr1 (386-482)||(16704751-16704847)
chr1 (366-482)||(32270358-32270474)
chr1 (386-469)||(13994141-13994224)
chr1 (366-473)||(17327711-17327818)
chr1 (366-473)||(31004137-31004244)
chr1 (366-473)||(35387373-35387480)
chr1 (366-444)||(1601178-1601256)
chr1 (366-440)||(38663137-38663211)
chr1 (367-496)||(6771374-6771503)
chr1 (366-495)||(7183923-7184052)
chr1 (386-495)||(41967889-41967998)
chr1 (366-482)||(11772685-11772801)
chr1 (365-473)||(16476217-16476325)
chr1 (394-482)||(44738095-44738183)
chr1 (386-481)||(25539880-25539975)
chr1 (366-473)||(39281899-39282006)
chr1 (366-440)||(46154905-46154979)
chr1 (386-482)||(24339691-24339788)
chr1 (366-495)||(51264500-51264629)
chr1 (376-500)||(6144021-6144145)
chr1 (366-482)||(15539943-15540059)
chr1 (375-451)||(49303438-49303514)
chr1 (365-465)||(570390-570492)
chr1 (365-488)||(5109733-5109855)
chr1 (400-495)||(38087036-38087131)
chr1 (368-495)||(51703204-51703330)
chr1 (394-496)||(39792840-39792942)
chr1 (386-444)||(45658846-45658904)
chr1 (377-442)||(7837149-7837214)
chr1 (366-495)||(42512810-42512939)
chr1 (366-434)||(46447669-46447737)
chr1 (366-473)||(3414915-3415022)
chr1 (366-444)||(42705329-42705407)
chr1 (366-440)||(50304656-50304730)
chr1 (407-488)||(10384413-10384494)
chr1 (366-415)||(20495011-20495060)
chr1 (330-371)||(25343390-25343431)
chr1 (404-457)||(34283894-34283947)
chr1 (366-470)||(25343274-25343378)
chr1 (377-473)||(26733571-26733667)
[»] chr5 (43 HSPs)
chr5 (366-482)||(2351676-2351792)
chr5 (366-495)||(7523168-7523297)
chr5 (366-482)||(39918503-39918619)
chr5 (365-495)||(21739132-21739262)
chr5 (366-482)||(3735353-3735469)
chr5 (366-473)||(32528711-32528818)
chr5 (378-488)||(24036238-24036348)
chr5 (379-481)||(39788202-39788304)
chr5 (375-451)||(700616-700692)
chr5 (366-482)||(31770575-31770691)
chr5 (375-495)||(31880047-31880167)
chr5 (380-495)||(7770250-7770365)
chr5 (366-444)||(7208252-7208330)
chr5 (377-495)||(34794894-34795012)
chr5 (366-472)||(41790456-41790562)
chr5 (375-444)||(553402-553471)
chr5 (366-495)||(11963337-11963466)
chr5 (366-495)||(23091275-23091404)
chr5 (366-495)||(35701273-35701402)
chr5 (365-482)||(40489332-40489449)
chr5 (375-479)||(8560969-8561073)
chr5 (375-495)||(22493390-22493510)
chr5 (366-482)||(28090504-28090620)
chr5 (363-495)||(32092953-32093084)
chr5 (385-500)||(8136852-8136967)
chr5 (380-482)||(4689682-4689784)
chr5 (366-444)||(4818162-4818240)
chr5 (366-444)||(40182460-40182538)
chr5 (375-444)||(31644451-31644520)
chr5 (366-473)||(6284291-6284399)
chr5 (386-494)||(22432281-22432389)
chr5 (375-470)||(5598485-5598580)
chr5 (375-473)||(18470421-18470519)
chr5 (375-473)||(24181617-24181715)
chr5 (386-464)||(27839075-27839153)
chr5 (366-444)||(41459585-41459663)
chr5 (386-495)||(5571615-5571724)
chr5 (366-441)||(29241374-29241449)
chr5 (404-488)||(17031191-17031275)
chr5 (323-370)||(31644382-31644429)
chr5 (335-374)||(40563842-40563881)
chr5 (296-354)||(22432435-22432493)
chr5 (407-496)||(26180264-26180353)
[»] chr8 (50 HSPs)
chr8 (365-495)||(37618372-37618502)
chr8 (366-495)||(3251636-3251765)
chr8 (366-495)||(4052476-4052605)
chr8 (366-495)||(29563206-29563335)
chr8 (366-482)||(5968857-5968973)
chr8 (366-481)||(12753319-12753434)
chr8 (365-495)||(14005024-14005154)
chr8 (366-495)||(37664263-37664392)
chr8 (366-495)||(41709773-41709902)
chr8 (366-470)||(6386572-6386676)
chr8 (366-482)||(7394807-7394923)
chr8 (366-482)||(8673048-8673164)
chr8 (366-482)||(45446451-45446567)
chr8 (366-472)||(32303588-32303694)
chr8 (374-499)||(10656662-10656787)
chr8 (366-495)||(29672303-29672432)
chr8 (366-495)||(34063124-34063253)
chr8 (375-495)||(17805696-17805816)
chr8 (366-482)||(30543015-30543131)
chr8 (359-493)||(22756393-22756527)
chr8 (366-484)||(31732060-31732178)
chr8 (366-444)||(32020032-32020110)
chr8 (366-482)||(31513576-31513692)
chr8 (366-444)||(6460257-6460336)
chr8 (366-473)||(21272680-21272787)
chr8 (386-496)||(15001482-15001592)
chr8 (380-482)||(30501155-30501257)
chr8 (366-495)||(10467060-10467189)
chr8 (366-495)||(27103955-27104084)
chr8 (296-495)||(37861789-37861984)
chr8 (366-482)||(41548614-41548730)
chr8 (393-496)||(35225685-35225788)
chr8 (366-444)||(34101504-34101582)
chr8 (366-495)||(7591427-7591556)
chr8 (376-465)||(10320287-10320376)
chr8 (386-482)||(29611048-29611144)
chr8 (374-473)||(54175-54273)
chr8 (377-444)||(13406966-13407033)
chr8 (366-473)||(25478239-25478346)
chr8 (374-439)||(36426283-36426348)
chr8 (386-495)||(40389056-40389165)
chr8 (393-473)||(3800945-3801025)
chr8 (374-429)||(3361789-3361844)
chr8 (373-444)||(10932739-10932810)
chr8 (401-491)||(17520626-17520715)
chr8 (386-444)||(39642899-39642957)
chr8 (376-473)||(5892074-5892171)
chr8 (366-451)||(27109565-27109650)
chr8 (393-473)||(16595151-16595231)
chr8 (386-470)||(45114071-45114155)
[»] chr6 (35 HSPs)
chr6 (366-495)||(2614892-2615021)
chr6 (375-495)||(10324115-10324235)
chr6 (368-495)||(24203360-24203487)
chr6 (366-444)||(3932862-3932940)
chr6 (366-495)||(3259679-3259808)
chr6 (366-473)||(11279124-11279231)
chr6 (376-495)||(15277284-15277403)
chr6 (366-473)||(32409878-32409985)
chr6 (366-444)||(11382060-11382138)
chr6 (366-444)||(24242660-24242738)
chr6 (366-495)||(15276941-15277070)
chr6 (366-472)||(11613818-11613924)
chr6 (366-473)||(7396152-7396258)
chr6 (366-444)||(11212253-11212331)
chr6 (375-495)||(4494118-4494239)
chr6 (366-495)||(10485153-10485282)
chr6 (366-495)||(32132384-32132513)
chr6 (366-482)||(34176826-34176942)
chr6 (366-473)||(9902684-9902791)
chr6 (366-473)||(10959996-10960103)
chr6 (386-444)||(166978-167036)
chr6 (386-444)||(3379726-3379784)
chr6 (366-440)||(17867831-17867905)
chr6 (366-440)||(17877614-17877688)
chr6 (393-495)||(29054379-29054481)
chr6 (366-482)||(3290668-3290782)
chr6 (366-442)||(8177938-8178014)
chr6 (386-473)||(14925482-14925569)
chr6 (386-473)||(17443278-17443365)
chr6 (386-473)||(18057535-18057622)
chr6 (366-444)||(34684038-34684117)
chr6 (400-482)||(18597175-18597257)
chr6 (391-445)||(29202981-29203035)
chr6 (406-495)||(11675378-11675467)
chr6 (380-441)||(32860061-32860122)
[»] chr4 (68 HSPs)
chr4 (366-491)||(9512302-9512427)
chr4 (366-495)||(20802489-20802618)
chr4 (366-495)||(21580025-21580154)
chr4 (366-495)||(2725091-2725219)
chr4 (366-491)||(55593884-55594009)
chr4 (343-482)||(50729513-50729653)
chr4 (366-473)||(43641098-43641205)
chr4 (366-473)||(50727893-50728000)
chr4 (366-473)||(50735907-50736014)
chr4 (366-495)||(24210317-24210447)
chr4 (366-495)||(1231310-1231439)
chr4 (366-495)||(33176990-33177119)
chr4 (366-495)||(33552800-33552929)
chr4 (366-495)||(38486215-38486344)
chr4 (366-495)||(56154620-56154749)
chr4 (366-470)||(23521879-23521983)
chr4 (366-473)||(49152080-49152186)
chr4 (366-473)||(55065313-55065420)
chr4 (385-495)||(2629909-2630019)
chr4 (375-473)||(3649644-3649742)
chr4 (363-481)||(20694367-20694485)
chr4 (366-495)||(24002337-24002467)
chr4 (377-495)||(38812530-38812648)
chr4 (386-495)||(44324300-44324409)
chr4 (366-495)||(46680468-46680597)
chr4 (366-495)||(52319322-52319451)
chr4 (366-495)||(54542989-54543117)
chr4 (366-482)||(36885931-36886047)
chr4 (366-473)||(12600885-12600992)
chr4 (366-473)||(29785517-29785624)
chr4 (365-444)||(36743697-36743776)
chr4 (342-473)||(52673786-52673917)
chr4 (366-500)||(53200596-53200731)
chr4 (366-495)||(52949719-52949848)
chr4 (375-495)||(21202747-21202867)
chr4 (400-472)||(25978592-25978664)
chr4 (386-473)||(32181282-32181369)
chr4 (366-473)||(36497216-36497323)
chr4 (366-500)||(34929914-34930048)
chr4 (365-482)||(20517993-20518110)
chr4 (376-457)||(22318380-22318461)
chr4 (366-495)||(44649122-44649251)
chr4 (400-488)||(6776611-6776699)
chr4 (366-482)||(37865752-37865868)
chr4 (365-473)||(43739459-43739567)
chr4 (365-457)||(45577688-45577780)
chr4 (366-437)||(29616169-29616240)
chr4 (386-473)||(41711866-41711953)
chr4 (366-444)||(4325790-4325868)
chr4 (379-472)||(23327930-23328024)
chr4 (386-444)||(28115271-28115329)
chr4 (366-440)||(47642504-47642578)
chr4 (366-495)||(50178450-50178580)
chr4 (366-491)||(37695503-37695628)
chr4 (366-482)||(7001853-7001967)
chr4 (404-484)||(9947966-9948046)
chr4 (366-470)||(39078660-39078764)
chr4 (366-473)||(2786963-2787070)
chr4 (400-451)||(7554959-7555010)
chr4 (386-473)||(9807175-9807261)
chr4 (393-444)||(50186554-50186605)
chr4 (400-482)||(26083372-26083454)
chr4 (366-436)||(40792416-40792486)
chr4 (393-482)||(16320545-16320634)
chr4 (411-484)||(42772832-42772905)
chr4 (376-424)||(14296606-14296654)
chr4 (376-424)||(14314854-14314902)
chr4 (307-371)||(41720766-41720830)
[»] chr3 (46 HSPs)
chr3 (365-482)||(21221332-21221449)
chr3 (366-495)||(29584872-29585001)
chr3 (366-495)||(1344666-1344795)
chr3 (366-491)||(29646063-29646188)
chr3 (366-482)||(40094500-40094616)
chr3 (366-482)||(42636375-42636491)
chr3 (366-473)||(20609629-20609736)
chr3 (366-495)||(28675787-28675916)
chr3 (366-495)||(39052797-39052926)
chr3 (366-495)||(47958391-47958520)
chr3 (366-495)||(49748870-49748999)
chr3 (366-495)||(51259739-51259868)
chr3 (366-495)||(53557754-53557883)
chr3 (386-482)||(19906779-19906875)
chr3 (366-482)||(51925180-51925296)
chr3 (375-482)||(3864647-3864754)
chr3 (392-495)||(25860380-25860483)
chr3 (380-495)||(50678809-50678924)
chr3 (366-495)||(12349130-12349259)
chr3 (386-495)||(21373947-21374056)
chr3 (366-495)||(25927286-25927415)
chr3 (366-495)||(33364737-33364866)
chr3 (366-482)||(34026664-34026780)
chr3 (365-444)||(3695302-3695381)
chr3 (374-473)||(34351349-34351448)
chr3 (366-444)||(4851466-4851544)
chr3 (366-472)||(20255042-20255147)
chr3 (366-495)||(44116936-44117065)
chr3 (369-473)||(8648538-8648642)
chr3 (366-482)||(24571278-24571394)
chr3 (366-482)||(38213351-38213467)
chr3 (386-469)||(3964305-3964388)
chr3 (366-469)||(26282372-26282475)
chr3 (366-481)||(44000258-44000373)
chr3 (366-495)||(2135067-2135196)
chr3 (366-495)||(31882981-31883110)
chr3 (375-495)||(51296587-51296707)
chr3 (365-412)||(32621865-32621912)
chr3 (386-473)||(54622777-54622864)
chr3 (343-430)||(14155484-14155573)
chr3 (379-444)||(23322151-23322216)
chr3 (386-482)||(24721502-24721598)
chr3 (366-457)||(3867646-3867737)
chr3 (366-444)||(5442288-5442366)
chr3 (376-438)||(39215485-39215547)
chr3 (323-372)||(42547462-42547511)
[»] scaffold0169 (2 HSPs)
scaffold0169 (366-488)||(18032-18154)
scaffold0169 (366-473)||(12529-12636)
[»] scaffold0208 (1 HSPs)
scaffold0208 (375-495)||(2309-2429)
[»] scaffold0054 (2 HSPs)
scaffold0054 (385-495)||(23590-23700)
scaffold0054 (366-429)||(19903-19966)
[»] scaffold0014 (1 HSPs)
scaffold0014 (366-495)||(101945-102074)
[»] scaffold0181 (1 HSPs)
scaffold0181 (366-444)||(19112-19190)
[»] scaffold0027 (1 HSPs)
scaffold0027 (366-443)||(15168-15245)
[»] scaffold0650 (1 HSPs)
scaffold0650 (368-482)||(1627-1741)
[»] scaffold0004 (1 HSPs)
scaffold0004 (366-444)||(372986-373064)
[»] scaffold0098 (1 HSPs)
scaffold0098 (366-440)||(51435-51509)
[»] scaffold0729 (1 HSPs)
scaffold0729 (400-488)||(4557-4645)
[»] scaffold0360 (2 HSPs)
scaffold0360 (366-430)||(13615-13679)
scaffold0360 (386-444)||(15403-15461)
[»] scaffold0025 (1 HSPs)
scaffold0025 (380-482)||(5423-5526)
[»] scaffold0155 (1 HSPs)
scaffold0155 (368-457)||(33553-33642)
[»] scaffold0957 (1 HSPs)
scaffold0957 (366-442)||(2520-2595)
[»] scaffold0280 (1 HSPs)
scaffold0280 (386-470)||(13683-13767)
[»] scaffold0050 (1 HSPs)
scaffold0050 (386-482)||(42934-43029)


Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 136 - 499
Target Start/End: Original strand, 42331809 - 42332192
Alignment:
Q  136 cgggttcaagagtgaaagaaagaatcctcacaa---------cgaattagttatcatcttgtgcaaagtaaacgaagaccgcacatatttagctaaaaat 226  Q
    |||||||||||| ||||||||||||||||||||         |||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||    
T  42331809 cgggttcaagagagaaagaaagaatcctcacaattacctcaacgaattagttatcatcttgtacaaagtaaacgaagaccgctcagatttagctaaaaat 42331908  T
Q  227 cacttccaataggaaaa--tttaatttaatccatcttgctcaacgttcacctatttattagagaaaatgaaagtaagtattggacataacagcaaaacac 324  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||    
T  42331909 cacttccaataggaaaaaatttaatttaatccatcttgctcatcgttcacctatttattagagaaaatgaaagtaaatattggacagaacagcaaagcac 42332008  T
Q  325 a----aagtagaacaacataagacaa-----atttttatgatgttgaataatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtg 415  Q
    |    |||||||| |||| |||||||     |||| |||||   ||||||||||||| |||| ||||| ||||| || |||||||||||| ||||| |||    
T  42332009 aaattaagtagaataacacaagacaaatttgatttgtatgaatgtgaataatttttggtggataaaatgttattttgatatttaagacaatttgtatgtg 42332108  T
Q  416 agagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaatttatcctgtctct 499  Q
    ||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| |||||    
T  42332109 agacaaaaagttgtgatgtggtttggtgaagaactagaatttatgtttttgtcctgtcatttgcctccaatttatcctatctct 42332192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 366 - 492
Target Start/End: Complemental strand, 32873864 - 32873738
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||| |  ||||||    
T  32873864 atttttgagggacaaaatgctattttggtatttcagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaaggacaaaaatatgagttttt 32873765  T
Q  466 gtcctgtcatttgcctcaaatttatcc 492  Q
    ||||||||  ||||||| | |||||||    
T  32873764 gtcctgtcccttgcctccagtttatcc 32873738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 11321980 - 11321851
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  11321980 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 11321881  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  11321880 gtcctgtccgttgcctccagtttgtcctgt 11321851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 3922798 - 3922669
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| ||| |||||||||||| || ||||||||||| ||||||||||||| |||||| ||| |  ||||||    
T  3922798 atttttgagggacaaaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagttttt 3922699  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||| ||||  ||||||| | ||| ||||||    
T  3922698 gtcttgtcccttgcctccagtttgtcctgt 3922669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 10932652 - 10932523
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||| ||||||||| | |||| ||| |  ||||||    
T  10932652 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtagtttggtgagggacaaaaatatgagttttt 10932553  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  10932552 gtcctgtcccttgcctccagtttgtcctgt 10932523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 36769664 - 36769535
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    ||||||||  ||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  36769664 atttttgagagacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 36769565  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  36769564 gtcctgtcccttgcctctagtttgtcctgt 36769535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 40753155 - 40753284
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| |||| |||||||| | |||| ||| |  ||||||    
T  40753155 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagttttt 40753254  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  40753255 gtcctgtcccttgcctccagtttgtcctgt 40753284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 47953190 - 47953319
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  47953190 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 47953289  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||| ||||  ||||||| | ||| ||||||    
T  47953290 gtcatgtcccttgcctccagtttgtcctgt 47953319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 329470 - 329586
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| |||| ||| || ||||||||||||| || ||||||||||||||||||||||||| | |||| |||||  ||||||    
T  329470 atttttgggggacaaaatgctattttggtgttttaggcaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatttcagttttt 329569  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||| |||| ||||||||    
T  329570 gtcttgtcctttgcctc 329586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 375 - 491
Target Start/End: Original strand, 1870144 - 1870260
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtca 474  Q
    ||||||||| ||||| || ||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||||||||||     
T  1870144 ggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcc 1870243  T
Q  475 tttgcctcaaatttatc 491  Q
     ||||||| | ||||||    
T  1870244 cttgcctccagtttatc 1870260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 21784871 - 21784987
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  21784871 atttttggaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 21784970  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  21784971 gtcctgtctcttgcctc 21784987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 18470684 - 18470791
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||||||| || |||||||| || |||||||||||||   |||| ||| |  ||||||    
T  18470684 atttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttatgctgtggtttggtgagagacaaaaatatgagttttt 18470783  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  18470784 gtcctgtc 18470791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 18386525 - 18386603
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| |||||||||||||    
T  18386525 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 18386603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 46633697 - 46633775
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| |||||||||||||    
T  46633697 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 46633775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 26371904 - 26371775
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| | |||||| |||||||||||||||| || ||||||||||| |||| |||||||| | |||| ||| |  ||||||    
T  26371904 atttttgagggacaaaatgctattttagtattttagacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagttttt 26371805  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  26371804 gtcctgtcccttgcctccagtttgtcctgt 26371775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 47316793 - 47316664
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| ||||| || |||||||||| | |||||| ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  47316793 atttttgagggacaaaatgctattttggtaatttagacaacttgcatgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 47316694  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  47316693 gtcctgtcccttgcctccagtttgtcctgt 47316664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 26994320 - 26994204
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||| | |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  | ||||    
T  26994320 attttttagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagatttt 26994221  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  26994220 gtcctgtcccttgcctc 26994204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 29661323 - 29661439
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| |||||||| ||| |||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  29661323 atttttgtgggacaaaatgctattttggtattttagataacttgtacgtgggataaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 29661422  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  29661423 gtcctgtcccttgcctc 29661439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 482
Target Start/End: Complemental strand, 41211275 - 41211179
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||||||||||  |||||||    
T  41211275 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctc 41211179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 44748695 - 44748811
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||  ||||||||||||| | |||| |||||  ||||||    
T  44748695 atttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtattgtggtttggtgagggacaaaaatttgagttttt 44748794  T
Q  466 gtcctgtcatttgcctc 482  Q
    || |||||  |||||||    
T  44748795 gttctgtcccttgcctc 44748811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 393 - 472
Target Start/End: Complemental strand, 41665643 - 41665564
Alignment:
Q  393 gtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgt 472  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||| || | |||| ||||   |||||||||||||    
T  41665643 gtattttagacaacttgtacgtgagacaaaaagttgtgatgtggtttggcgagggacaaaaattgcagtttttgtcctgt 41665564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 9913525 - 9913603
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||  |||| |||| ||||| |||||||| ||||||| |||||||| || |||||||||||||||||||||||||    
T  9913525 atttttgggggacgaaatgttattttggtattttagacaacctgtacgtgggaaaaaaagttgtgatgtggtttggtga 9913603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 9927213 - 9927291
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||  |||| |||| ||||| |||||||| ||||||| |||||||| || |||||||||||||||||||||||||    
T  9927213 atttttgggggacgaaatgttattttggtattttagacaacctgtacgtgggaaaaaaagttgtgatgtggtttggtga 9927291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 473
Target Start/End: Complemental strand, 43189328 - 43189230
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||||||||| |||| |||||||  |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||||| ||||    
T  43189328 ggacaaaatactattttggtattctagacaacttgtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtc 43189230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 43158781 - 43158652
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| || | ||| |||||||||||||||| || ||||||||||| ||||||||||| | | |||| ||| |  ||||||    
T  43158781 atttttgagggacaaaatgctattttgatgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagttttt 43158682  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  43158681 gtcctgtcccttgcctccagtttgtcctgt 43158652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 30849341 - 30849234
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||| ||||| |||||||| | ||||||||||  || || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  30849341 atttttgggggacaaaatgttattttggtattttatacaacttgtatatgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 30849242  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  30849241 gtcctgtc 30849234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 20127289 - 20127418
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||| |||| | ||| |||||||| | |||| ||||||||| || ||||||||||||||||||||| ||| |||||| ||| |  | ||||    
T  20127289 atttttgggggacgaaatgtcattttggtattttacacaaattgtacgtgggacaaaaagttgtgatgtggtttgctgaggaacaaaaatatcagctttt 20127388  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  20127389 gtcctgtcccttgcctccagtttgtcctgt 20127418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 38301343 - 38301471
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||| ||||| || ||||| ||||||||||| |||| || ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  38301343 atttttgggggacaaaatgttattttgatattttagacaacttgt-cgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagttttt 38301441  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  38301442 gtcctgtctcttgcctccagtttgtcctgt 38301471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 495
Target Start/End: Complemental strand, 30599094 - 30598974
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtca 474  Q
    ||||||||| ||||| |||||||| ||| || |||||| ||||| ||||||||||| ||||||||| ||| | |||| ||| |  | ||||||||||||     
T  30599094 ggacaaaatgttattttggtattttagataatttgtacttgagacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagcttttgtcctgtcc 30598995  T
Q  475 tttgcctcaaatttatcctgt 495  Q
     ||||||| | ||| ||||||    
T  30598994 cttgcctccagtttgtcctgt 30598974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 47947760 - 47947824
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtg 430  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || |||||||||||    
T  47947760 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 47947824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 48445521 - 48445637
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||| ||||| | || ||| |||||||||||| | |||| ||||||||||  |||| |||||||||| |||| |||||  ||||||    
T  48445521 atttttgggggacaaaatgttattttcgtgttttagacaacttgtatgcgagacaaaaagttgtcctgtgatttggtgaaggacaaaaatttcagttttt 48445620  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||| ||||  |||||||    
T  48445621 gtcatgtcccttgcctc 48445637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 496
Target Start/End: Complemental strand, 15035348 - 15035218
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    ||||||| ||| |||||| ||||| || ||||| |||||| ||||| |||  | ||||||||||| |||||| |||||| |||||| |||||   ||||     
T  15035348 atttttggtgggcaaaatgttattttgatattttagacaatttgtatgtggtacaaaaagttgtgttgtggtctggtgaggaacaagaatttcaattttc 15035249  T
Q  466 gtcctgtcatttgcctcaaatttatcctgtc 496  Q
    |||||||| ||||| || | ||| |||||||    
T  15035248 gtcctgtcctttgcttccagtttgtcctgtc 15035218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 440
Target Start/End: Original strand, 26652866 - 26652940
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttg 440  Q
    |||||||  |||||||||  |||| || ||||| |||||||||||||||| || ||||||||||| |||||||||    
T  26652866 atttttggcggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 26652940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 440
Target Start/End: Complemental strand, 34295499 - 34295425
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttg 440  Q
    |||||||  |||||||||  |||| || ||||| |||||||||||||||| || ||||||||||| |||||||||    
T  34295499 atttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 34295425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 42331700 - 42331748
Alignment:
Q  30 caaaatggtactctaatctaata---caaggtaaagggtagaaatagag 75  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||    
T  42331700 caaaatggtactctaatctaatagtacaaggtaaagggtagaaatagag 42331748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 439
Target Start/End: Original strand, 21133392 - 21133445
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggttt 439  Q
    |||| |||||||| |||||| ||||| |||||| ||||||||||||||||||||    
T  21133392 tattttggtattttagacaatttgtatgtgagacaaaaagttgtgatgtggttt 21133445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 366 - 451
Target Start/End: Original strand, 22631738 - 22631823
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaa 451  Q
    |||||||  |||| |||||| ||| |||||||| |||||||||||||||   | |||||||| || ||||||||||||||| ||||    
T  22631738 atttttgggggacgaaatatcattttggtattttagacaacttgtacgtataacaaaaagttatgttgtggtttggtgaaggacaa 22631823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 23349359 - 23349270
Alignment:
Q  393 gtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    |||||| |||||||||||| ||| || ||||||||||| ||||||||||||| | |||| ||| |  |||||||| |||||  |||||||    
T  23349359 gtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgttctgtcccttgcctc 23349270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 34519535 - 34519624
Alignment:
Q  393 gtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    |||||| ||||||||||||| || || ||||||||||| |||||||||| || | |||| ||||   ||||||||||||||  |||||||    
T  34519535 gtattttagacaacttgtacctgggacaaaaagttgtgttgtggtttggcgagggacaaaaattgcagtttttgtcctgtcccttgcctc 34519624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 424
Target Start/End: Original strand, 38360068 - 38360129
Alignment:
Q  363 ataatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaa 424  Q
    |||||||||| |||||||||||||||| | |||||| | |||||||||| |||||| |||||    
T  38360068 ataatttttgttggacaaaatattatttttgtattttaaacaacttgtaggtgagacaaaaa 38360129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 451
Target Start/End: Complemental strand, 43214000 - 43213935
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaa 451  Q
    |||| ||||||||  ||||||||||| ||| || ||||||||||| ||||||||||||||| ||||    
T  43214000 tattttggtatttttgacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgaaggacaa 43213935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 3892121 - 3892005
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| | |||||||  |||| |||||||  |||||||||||||||  || ||||||||||| |||| ||||||||   |||| ||| |  ||||||    
T  3892121 atttttgaggaacaaaatgctattttggtattctagacaacttgtacgtaggacaaaaagttgtgctgtgatttggtgagagacaaaaatatgagttttt 3892022  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  3892021 gtcctgtcccttgcctc 3892005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 43368201 - 43368317
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    ||||| || |||||||||  |||| || ||||| |||||||||||||||  || ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  43368201 attttggagggacaaaatgctattttgatattttagacaacttgtacgtaggacaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagttttt 43368300  T
Q  466 gtcctgtcatttgcctc 482  Q
    |||| |||  |||||||    
T  43368301 gtcccgtctcttgcctc 43368317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 440
Target Start/End: Original strand, 1363671 - 1363710
Alignment:
Q  401 gacaacttgtacgtgagagaaaaagttgtgatgtggtttg 440  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  1363671 gacaacctgtacgtgagacaaaaagttgtgatgtggtttg 1363710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 48894717 - 48894824
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||| ||||| |||  ||| |||  | ||||||||| || |||||||||||||||||||| |||||  |||| ||| |  ||||||    
T  48894717 atttttgggggacaaaatgttattttggatttttagatgatttgtacgtgggacaaaaagttgtgatgtggtttagtgaatgacaaaaatatgagttttt 48894816  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  48894817 gtcctgtc 48894824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 374
Target Start/End: Complemental strand, 30260045 - 30260011
Alignment:
Q  340 aagacaaatttttatgatgttgaataatttttgat 374  Q
    |||||||||||||||||| ||||||||||||||||    
T  30260045 aagacaaatttttatgatattgaataatttttgat 30260011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 468
Target Start/End: Original strand, 48699418 - 48699500
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtc 468  Q
    |||| |||||||| ||||||||||||||||  | ||| ||||||| |||||||| |||| | |||| |||||  |||||||||    
T  48699418 tattttggtattttagacaacttgtacgtggaacaaatagttgtgttgtggtttagtgagggacaagaatttcagtttttgtc 48699500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 482
Target Start/End: Complemental strand, 26910470 - 26910389
Alignment:
Q  401 gacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    ||||||||||||||| || ||||||||||| |||||||||| || | |||| ||||   |||||| |||||||  |||||||    
T  26910470 gacaacttgtacgtgtgacaaaaagttgtgttgtggtttggcgagggacaaaaattgcagtttttatcctgtcccttgcctc 26910389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 29992789 - 29992729
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagtt 427  Q
    ||||||| ||||||||| |||||| || ||||| ||| ||||||||||||||| ||||||||    
T  29992789 atttttggtggacaaaaaattattttg-tattttagataacttgtacgtgagacaaaaagtt 29992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 43214096 - 43214032
Alignment:
Q  307 gacataacagcaaaacacaaagtagaacaacataagacaaatttttatgatgttgaataattttt 371  Q
    |||| ||||||| ||||||| |||||||| || | |||||||||||||||  |||||| ||||||    
T  43214096 gacaaaacagcacaacacaaggtagaacagcacaggacaaatttttatgacattgaatcattttt 43214032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 33366606 - 33366735
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||| ||| |||||||||||||| ||||||||||||| |||||| ||| |  ||||||    
T  33366606 atttttgagggacaaaatgttattttggtattttagacaacttgtatgtgggagaaaaagttgtgttgtggtttggtgaggaacaaaaatatgagttttt 33366705  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  33366706 gtcctgtcccttgcctccagtttgtcctgt 33366735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 32497911 - 32498018
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||| | |||| ||| |  ||||||    
T  32497911 atttttgaaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgaggtacaaaaatatgagttttt 32498010  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  32498011 gtcctgtc 32498018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 366 - 500
Target Start/End: Original strand, 33889239 - 33889373
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||| | | || ||| |  ||||||    
T  33889239 atttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggaaaaaaatatgagttttt 33889338  T
Q  466 gtcctgtcatttgcctcaaatttatcctgtctctg 500  Q
    ||||||||  ||||||| | ||| |||||| ||||    
T  33889339 gtcctgtcccttgcctccagtttgtcctgtatctg 33889373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 7761667 - 7761551
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  7761667 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 7761568  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  7761567 gtcctgtcccttgcctc 7761551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 19513783 - 19513667
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  19513783 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 19513684  T
Q  466 gtcctgtcatttgcctc 482  Q
    |||||||| ||||||||    
T  19513683 gtcctgtcctttgcctc 19513667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 365 - 495
Target Start/End: Original strand, 7258891 - 7259022
Alignment:
Q  365 aatttttgatggacaaaa-tattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttt 463  Q
    ||||||||| |||||||| | ||||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| | |||| ||| |  ||||    
T  7258891 aatttttgagggacaaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttt 7258990  T
Q  464 ttgtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||||  ||||||| | ||| ||||||    
T  7258991 ttgtcctgtcccttgcctccagtttgtcctgt 7259022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 366 - 488
Target Start/End: Original strand, 16104270 - 16104392
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||| |||||||||||| ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  16104270 atttttgagggacaaaatgctattttggtattttagacaatttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 16104369  T
Q  466 gtcctgtcatttgcctcaaattt 488  Q
    ||||||||  ||||||| |||||    
T  16104370 gtcctgtcccttgcctccaattt 16104392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 12939394 - 12939278
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||| ||||| |||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||| |  ||||||    
T  12939394 atttttgggggacaaaatgttattttggtatcttagacaacttgtacgtgagataaaaagttgtgctgtggtttggtgaaggacaaaaatatcagttttt 12939295  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||| ||||  |||||||    
T  12939294 gtcatgtcccttgcctc 12939278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 441
Target Start/End: Complemental strand, 30326425 - 30326350
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttgg 441  Q
    |||||||| |||||||||| |||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||    
T  30326425 atttttgagggacaaaatactattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttgg 30326350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 9717220 - 9717298
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| |||||||||| |||| |||||||| |||||||||||||||| || ||||||||||| |||||||||||||    
T  9717220 atttttgagggacaaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 9717298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 17540710 - 17540840
Alignment:
Q  366 atttttgatggacaaaatattattgt-ggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    |||||||| |||||||||| |||| | ||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  |||||    
T  17540710 atttttgagggacaaaatactatttttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 17540809  T
Q  465 tgtcctgtcatttgcctcaaatttatcctgt 495  Q
    |||||||||  ||||||| | ||| ||||||    
T  17540810 tgtcctgtcccttgcctccagtttgtcctgt 17540840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 365 - 491
Target Start/End: Original strand, 26418918 - 26419044
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    ||||||||  ||| ||||| ||||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| |||||| ||| |  |||||    
T  26418918 aatttttgggggataaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagtttt 26419017  T
Q  465 tgtcctgtcatttgcctcaaatttatc 491  Q
    |||| ||||  | ||||| ||||||||    
T  26419018 tgtcatgtccctcgcctccaatttatc 26419044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 35114781 - 35114910
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||| ||||| ||||||||||||| | |||| ||| |  ||||||    
T  35114781 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagttttt 35114880  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  35114881 gtcctgtcccttgcctctagtttgtcctgt 35114910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 37308651 - 37308780
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||| | |||||||||| |||| |||||||| |||||| ||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  37308651 attttttagggacaaaatactattttggtattttagacaatttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 37308750  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  37308751 gtcctgtcccttgcctccagtttgtcctgt 37308780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 479
Target Start/End: Original strand, 41934577 - 41934690
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    ||||||| |||||||||| ||||| |||||||| ||||||||| |||||  || ||||||||||| |||||||| |||||| |||| |||||  ||||||    
T  41934577 atttttggtggacaaaatgttattttggtattttagacaacttatacgtaggacaaaaagttgtgttgtggtttagtgaagtacaagaatttcagttttt 41934676  T
Q  466 gtcctgtcatttgc 479  Q
    ||| |||| |||||    
T  41934677 gtcttgtcttttgc 41934690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 5278928 - 5278812
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||| ||||| ||||||||||||| | |||| ||| |  ||||||    
T  5278928 atttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagttttt 5278829  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  5278828 gtcctgtcccttgcctc 5278812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 40832563 - 40832447
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||| ||||| |||| |||||||| |||| |||||||||||||| ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  40832563 atttttgggggacgaaatactattttggtattttagactacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatccgttttt 40832464  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  40832463 gtcctgtcccttgcctc 40832447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 30798583 - 30798505
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| |||||||||  |||| |||||||| ||| |||||||||||| || |||||||||||||||||||||||||    
T  30798583 atttttgagggacaaaatgctattttggtattttagataacttgtacgtgggataaaaagttgtgatgtggtttggtga 30798505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 37003962 - 37003884
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| ||||||||| ||||| |||||||| |||||| ||||||||| || ||||||||||| |||||||||||||    
T  37003962 atttttgagggacaaaatgttattttggtattttagacaatttgtacgtgggacaaaaagttgtgttgtggtttggtga 37003884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 9733024 - 9732895
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| || ||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  9733024 atttttgagggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 9732925  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||| ||||  ||||||| | ||| ||||||    
T  9732924 gtcttgtcccttgcctccagtttgtcctgt 9732895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 18685832 - 18685961
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| |  ||||| |||||||||||||||| || ||||||||||| |||||||||||||   |||| ||| |  ||||||    
T  18685832 atttttgagggacaaaatgttattttaatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagagacaaaaatatgagttttt 18685931  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||| |||| |||||||| | ||| ||||||    
T  18685932 gtcttgtcctttgcctccagtttgtcctgt 18685961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 34338806 - 34338935
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| ||||||||||| |||| || ||||||||||| ||||||||||||| |  ||| ||| |  ||||||    
T  34338806 atttttgagggacaaaatgctattttggtattttagacaacttgtgcgtgggacaaaaagttgtgctgtggtttggtgagggtcaaaaatatgagttttt 34338905  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  34338906 gtcctgtcccttgcctccagtttgtcctgt 34338935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 375 - 495
Target Start/End: Original strand, 11114877 - 11114997
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtca 474  Q
    |||| ||||| |||| ||| |||| ||||||||||| |||| || ||||||||||||||||||||||||| |||||| ||| |   |||||||||||||     
T  11114877 ggacgaaatactattttggaattttagacaacttgtgcgtgggacaaaaagttgtgatgtggtttggtgaggaacaaaaatatgattttttgtcctgtcc 11114976  T
Q  475 tttgcctcaaatttatcctgt 495  Q
     ||||||| | ||| ||||||    
T  11114977 cttgcctccagtttgtcctgt 11114997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 44284625 - 44284741
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| || ||||| ||||||||||||||||||| ||||||||||| |||||||| |||| | |||| ||| |  ||||||    
T  44284625 atttttgagggacaaaatgctattttgttattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttagtgagggacaaaaatatgagttttt 44284724  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||| ||||  |||||||    
T  44284725 gtcttgtcccttgcctc 44284741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 366 - 441
Target Start/End: Original strand, 2086068 - 2086143
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttgg 441  Q
    |||||||| ||||||||| ||||| |||||||| ||||||||||||||||| | ||||||||||  ||||||||||    
T  2086068 atttttgagggacaaaatgttattttggtatttcagacaacttgtacgtgaaacaaaaagttgtactgtggtttgg 2086143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 41366207 - 41366100
Alignment:
Q  363 ataatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtt 462  Q
    |||||||||  |||| | ||| ||||| |||||||| |||||||||||| |||||| ||||| ||||| ||||||||||||| | |||| |||||  |||    
T  41366207 ataattttttgtggatacaatgttattttggtattttagacaacttgtatgtgagacaaaaaattgtgttgtggtttggtgagggacaaaaatttcagtt 41366108  T
Q  463 tttgtcct 470  Q
    ||||||||    
T  41366107 tttgtcct 41366100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 375 - 482
Target Start/End: Original strand, 42365582 - 42365689
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtca 474  Q
    ||||||||| ||||| |||||||| ||||||||||| ||||| | ||||||||||| ||||||||| ||||| |||| ||| |  ||||||||| ||||     
T  42365582 ggacaaaatgttattttggtattttagacaacttgtccgtgatataaaaagttgtgttgtggtttgatgaaggacaaaaatatgagtttttgtcttgtcc 42365681  T
Q  475 tttgcctc 482  Q
     |||||||    
T  42365682 cttgcctc 42365689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 471
Target Start/End: Complemental strand, 28824624 - 28824546
Alignment:
Q  393 gtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctg 471  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||||||||| | |||| ||| |  ||||||||||||    
T  28824624 gtattttagacaacttgcacgtgagataaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctg 28824546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 42706355 - 42706433
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||| ||| || ||||||||||| |||||||||||||    
T  42706355 atttttgagggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtga 42706433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 2645180 - 2645076
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| | |||||||  |||| |||||||| |||||||||||| ||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  2645180 atttttgaggaacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 2645081  T
Q  466 gtcct 470  Q
    |||||    
T  2645080 gtcct 2645076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 495
Target Start/End: Complemental strand, 16177952 - 16177848
Alignment:
Q  391 tggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaatttat 490  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||||||||||| |   |||| ||| |  |||| |||||||||  ||||||| | |||||    
T  16177952 tggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagcgacaaaaatatcagtttatgtcctgtccattgcctccagtttat 16177853  T
Q  491 cctgt 495  Q
    |||||    
T  16177852 cctgt 16177848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 4641512 - 4641590
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| | |||||||  |||| |||||||| | |||||||||| |||||| ||||||||||| |||||||||||||    
T  4641512 atttttgaggaacaaaatgctattttggtattttaaacaacttgtatgtgagacaaaaagttgtgctgtggtttggtga 4641590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 38993138 - 38993049
Alignment:
Q  393 gtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    |||||| |||||||||||||||| || ||||||||||| |||||||||  || |||||| ||||   ||||||||||||||  |||||||    
T  38993138 gtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgacgaggaacaaaaattgtagtttttgtcctgtcccttgcctc 38993049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 482
Target Start/End: Original strand, 6896184 - 6896280
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    |||| |||| ||| |||||||||||||||| || ||||||||||| ||| ||||||||| | |||| |||||  |||||| |||||||  |||||||    
T  6896184 tattttggtgttttagacaacttgtacgtgggacaaaaagttgtgctgttgtttggtgagggacaaaaatttcagtttttatcctgtcccttgcctc 6896280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 496
Target Start/End: Complemental strand, 38623364 - 38623268
Alignment:
Q  400 agacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaatttatcctgtc 496  Q
    |||||||||||| ||| || ||||||||||| ||||||||||||| | |||| |||||  ||||||||| | ||  ||||||||| ||| |||||||    
T  38623364 agacaacttgtatgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcttttccattgcctcaagtttgtcctgtc 38623268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 39461310 - 39461374
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtg 430  Q
    |||||||| |||||||||  |||| |||||||| ||||| ||||||||||||| |||||||||||    
T  39461310 atttttgagggacaaaatgctattttggtattttagacagcttgtacgtgagataaaaagttgtg 39461374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 13829434 - 13829541
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||| ||||  |||| |||| ||| ||| ||||||||| || || |||||||||||||||||| | |||| | |||| |||||  ||||||    
T  13829434 atttttgagggacgaaatgatattttggtgttttagataacttgtacctgggacaaaaagttgtgatgtggtctagtgatggacaaaaatttcagttttt 13829533  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  13829534 gtcctgtc 13829541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 482
Target Start/End: Complemental strand, 26981778 - 26981687
Alignment:
Q  391 tggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    |||||||| |||||||||||||||   | |||||||| || ||||||||||||| | |||| ||| |  ||||||||| |||||||||||||    
T  26981778 tggtattttagacaacttgtacgtagaacaaaaagttttgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcatttgcctc 26981687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 444
Target Start/End: Complemental strand, 3913534 - 3913476
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||| |||||||| ||||||||||||||||  | ||||||||||| |||||||||||||    
T  3913534 tattttggtattttagacaacttgtacgtggaacaaaaagttgtgttgtggtttggtga 3913476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 12672568 - 12672490
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||  |||||||||  |||| |||||||| ||||||||||||| || || ||||| ||||| |||||||||||||    
T  12672568 atttttggaggacaaaatgctattttggtattttagacaacttgtacttgggataaaaacttgtgttgtggtttggtga 12672490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 375 - 472
Target Start/End: Complemental strand, 10399955 - 10399858
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgt 472  Q
    |||||||||  |||| |||  ||| ||||||||| ||| ||||| ||||||||||| |||||||| |||||| |||| ||| |  |||||||||||||    
T  10399955 ggacaaaatgctattttggatttttagacaacttatacatgagacaaaaagttgtgttgtggtttagtgaaggacaaaaatatgagtttttgtcctgt 10399858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 18793356 - 18793303
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgaga 418  Q
    ||||||||  ||||||||| ||||| |||||||| |||||||||||||||||||    
T  18793356 aatttttggaggacaaaatgttattttggtattttagacaacttgtacgtgaga 18793303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 32766599 - 32766482
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaa-gttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    |||||||  |||| |||| ||||| |||||||| ||||||| |||||||  || ||||| |||||| ||||||||||||| | |||| ||| |  |||||    
T  32766599 atttttggaggacgaaatgttattttggtattttagacaacctgtacgtaggacaaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttt 32766500  T
Q  465 tgtcctgtcatttgcctc 482  Q
    |||||||||  |||||||    
T  32766499 tgtcctgtcccttgcctc 32766482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 435
Target Start/End: Original strand, 2394243 - 2394335
Alignment:
Q  343 acaaatttttatgatgttgaataatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtg 435  Q
    ||||| ||||||||| ||||||||||||||  |||||||| | |||| | |||||| ||||||| | | | ||||| ||||||||||| ||||    
T  2394243 acaaaattttatgatattgaataatttttggaggacaaaaaactattattgtattttagacaacatatgcatgagataaaaagttgtgctgtg 2394335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 500
Target Start/End: Complemental strand, 15303280 - 15303200
Alignment:
Q  420 aaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaatttatcctgtctctg 500  Q
    ||||||||||||||| ||||| | ||| |||| |||||||||||||||| |||   ||||||| | ||| |||||||||||    
T  15303280 aaaaagttgtgatgtagtttgataaaggacaaaaatttatgtttttgtcatgtgtcttgcctctagtttgtcctgtctctg 15303200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 473
Target Start/End: Original strand, 1247171 - 1247250
Alignment:
Q  394 tatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    ||||| |||||||||||||||| || |||||||||||  |||||||||||| | |||| ||| |  | ||||||||||||    
T  1247171 tattttagacaacttgtacgtgggacaaaaagttgtgcagtggtttggtgagggacaaaaatatgagattttgtcctgtc 1247250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 468
Target Start/End: Complemental strand, 16062223 - 16062085
Alignment:
Q  330 agaacaacataagacaaatttttatgatgttgaataatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgaga-gaaaaagttg 428  Q
    ||||||||| |  ||||||||||||| | ||||||| |||||| |||||||||| ||||| ||  |||| |||||| ||||| ||| ||  |||||||||    
T  16062223 agaacaacacagaacaaatttttatggtattgaatattttttggtggacaaaatgttattttgtcattttagacaa-ttgtatgtgggacaaaaaagttg 16062125  T
Q  429 tgatgtggtttggtgaagaacaataatttatgtttttgtc 468  Q
    |   || ||||| ||| | |||| ||||||||||||||||    
T  16062124 tatcgtagtttgatgagggacaagaatttatgtttttgtc 16062085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 27462965 - 27462906
Alignment:
Q  312 aacagcaaaacacaaagtagaacaacataagacaaatttttatgatgttgaataattttt 371  Q
    ||||||| ||||||| ||||||||||| | ||||||||| |||||  |||||||||||||    
T  27462965 aacagcacaacacaaggtagaacaacacatgacaaatttatatgacattgaataattttt 27462906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 473
Target Start/End: Original strand, 40692321 - 40692400
Alignment:
Q  394 tatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    ||||| |||||||||||||||| || ||||||||||  ||||||||||||| | |||| |||    ||||||||||||||    
T  40692321 tattttagacaacttgtacgtgggacaaaaagttgttctgtggtttggtgagggacaaaaatacgagtttttgtcctgtc 40692400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 439
Target Start/End: Complemental strand, 18127079 - 18127009
Alignment:
Q  369 tttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggttt 439  Q
    ||||||||||||||  ||||| || ||||| | | ||||||||| ||||| ||||||||||| ||||||||    
T  18127079 tttgatggacaaaacgttattttgctattttacataacttgtacttgagacaaaaagttgtgttgtggttt 18127009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 428
Target Start/End: Original strand, 26796225 - 26796286
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttg 428  Q
    ||||||| ||||||||| | |||| |||||||| |||||||||||||||| || |||||||||    
T  26796225 atttttggtggacaaaagactatt-tggtattttagacaacttgtacgtgtgacaaaaagttg 26796286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 366 - 491
Target Start/End: Complemental strand, 26764964 - 26764839
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||| |||||||||| |||||||| |||||||||||||||| || ||||||||||| ||||||| ||||| | |||| ||| || ||||||    
T  26764964 atttttgagggacgaaatattattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggttcggtgagggacaaaaatataagttttt 26764865  T
Q  466 gtcctgtcatttgcctcaaatttatc 491  Q
    |||||||| |||||||| | ||||||    
T  26764864 gtcctgtcctttgcctccagtttatc 26764839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 16386859 - 16386988
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||| | |||| ||| |  ||||||    
T  16386859 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 16386958  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  16386959 gtcctgtcccttgcctctagtttgtcctgt 16386988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 50382572 - 50382456
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| | || ||| |||||||||||||||| || ||||||||||| ||||||||||||||| |||| |||||  ||||||    
T  50382572 atttttgagggacaaaatgttatttttgtgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaatttcagttttt 50382473  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  50382472 gtcctgtccattgcctc 50382456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 844893 - 844764
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  844893 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 844794  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  844793 gtcctgtcccttgcctctagtttgtcctgt 844764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 16437367 - 16437496
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| || ||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  16437367 atttttgaaggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 16437466  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    |||||||| |||||||| | ||| ||||||    
T  16437467 gtcctgtcctttgcctctagtttgtcctgt 16437496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 368 - 500
Target Start/End: Original strand, 41972918 - 41973050
Alignment:
Q  368 ttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgt 467  Q
    |||||| ||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||  ||||||||||||| | |||| ||| |  ||||||||    
T  41972918 ttttgagggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtagtgtggtttggtgagggacaaaaatatgagtttttgt 41973017  T
Q  468 cctgtcatttgcctcaaatttatcctgtctctg 500  Q
    | ||||  ||||||| | ||| |||||| ||||    
T  41973018 catgtcccttgcctccagtttgtcctgtatctg 41973050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 6711215 - 6711086
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||| ||||| ||||||||||||| | |||| ||| |  ||||||    
T  6711215 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagttttt 6711116  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  6711115 gtcctgtcccttgcctctagtttgtcctgt 6711086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 12890243 - 12890372
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||| | |||||||||||||||| || ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  12890243 atttttgagggacaaaatgctattttggtatcttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagttttt 12890342  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||||||||||    
T  12890343 gtcctgtcccttgcctccagtttatcctgt 12890372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 26118384 - 26118255
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| ||||||||| |||||| || ||||||||||| |||| |||||||| | |||| ||| |  ||||||    
T  26118384 atttttgagggacaaaatgctattttggtattttagacaacttttacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagttttt 26118285  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    |||||||| |||||||| | ||| ||||||    
T  26118284 gtcctgtcctttgcctccagtttgtcctgt 26118255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 45491044 - 45490915
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  45491044 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 45490945  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||| ||||  ||||||| | ||| ||||||    
T  45490944 gtcatgtcccttgcctccagtttgtcctgt 45490915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 28340472 - 28340356
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  28340472 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagttttt 28340373  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||| ||||  |||||||    
T  28340372 gtcttgtcccttgcctc 28340356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 30105849 - 30105733
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || |||||||| || ||||||||||||| | |||| ||| |  ||||||    
T  30105849 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttatgctgtggtttggtgagggacaaaaatatgagttttt 30105750  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  30105749 gtcctgtcccttgcctc 30105733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 363 - 495
Target Start/End: Complemental strand, 32289516 - 32289384
Alignment:
Q  363 ataatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtt 462  Q
    ||||||||||| |||||||||  |||| |||||||| | ||||||||||||||  | ||||||||||| ||||||||||||| | |||| ||| |  |||    
T  32289516 ataatttttgagggacaaaatgctattttggtattttaaacaacttgtacgtggaacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtt 32289417  T
Q  463 tttgtcctgtcatttgcctcaaatttatcctgt 495  Q
    |||||| ||||  ||||||| ||||| ||||||    
T  32289416 tttgtcttgtcccttgcctccaatttgtcctgt 32289384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 375 - 482
Target Start/End: Original strand, 17887962 - 17888069
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtca 474  Q
    ||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||| |||||||||| || | |||| ||| |  ||||||||||||||     
T  17887962 ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatatgagtttttgtcctgtcc 17888061  T
Q  475 tttgcctc 482  Q
     |||||||    
T  17888062 cttgcctc 17888069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 42510530 - 42510637
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| |||||||||||||   |||| ||| |  ||||||    
T  42510530 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagagacaaaaatatgagttttt 42510629  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  42510630 gtcctgtc 42510637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 472
Target Start/End: Complemental strand, 1351604 - 1351498
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    ||||||||  ||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  1351604 atttttgagagacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 1351505  T
Q  466 gtcctgt 472  Q
    |||||||    
T  1351504 gtcctgt 1351498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 473
Target Start/End: Complemental strand, 6029461 - 6029363
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||| |||| ||||| |||| ||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| |||||  ||||||||||||||    
T  6029461 ggacgaaatgttattttggtgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtcctgtc 6029363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 16451132 - 16451261
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||| ||| || ||||||||||| |||||||||||||   |||| ||| |  ||||||    
T  16451132 atttttgagggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagttttt 16451231  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  16451232 gtcctgtcccttgcctccagtttgtcctgt 16451261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 50540349 - 50540478
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||| ||||| |||| ||| |  |||| |    
T  50540349 atttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgaaggacaaaaatatgagtttat 50540448  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  50540449 gtcctgtcccttgcctccagtttgtcctgt 50540478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 482
Target Start/End: Original strand, 16704751 - 16704847
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    |||| |||||||| |||||||||||| |||||| ||| ||||||||||||||||||| | | |||| ||| |||||||||||| ||||  |||||||    
T  16704751 tattttggtattttagacaacttgtatgtgagacaaagagttgtgatgtggtttggtaagggacaaaaatatatgtttttgtcgtgtcccttgcctc 16704847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 32270358 - 32270474
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| || ||||| ||||||||||||| || || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  32270358 atttttgagggacaaaatgctattttgatattttagacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 32270457  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  32270458 gtcctgtcccttgcctc 32270474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 13994224 - 13994141
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcc 469  Q
    |||| |||||||| ||||||||||||| ||||| ||||||||||| ||||||||||||| | |||| |||||  ||||||||||    
T  13994224 tattttggtattttagacaacttgtacatgagacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtcc 13994141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 17327818 - 17327711
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||||||||| |||||||| ||| || |||||| ||||| ||||||||||| |||| |||||||| | |||| ||| |  ||||||    
T  17327818 atttttgggggacaaaatattattttggtattttagataatttgtacatgagacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagttttt 17327719  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  17327718 gtcctgtc 17327711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 31004137 - 31004244
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||| ||||| |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||  |  ||||||    
T  31004137 atttttgggggacgaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaacatcagttttt 31004236  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  31004237 gtcctgtc 31004244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 35387480 - 35387373
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||| |||||  |||| |||||||| ||||||||||||||||  | ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  35387480 atttttgagggataaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 35387381  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  35387380 gtcctgtc 35387373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 1601178 - 1601256
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    ||||||| ||||||||||  |||| |||||||| |||||||||||| ||| || ||||||||||| |||||||||||||    
T  1601178 atttttggtggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtga 1601256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 440
Target Start/End: Original strand, 38663137 - 38663211
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttg 440  Q
    |||||||| ||||||||| ||||| || ||||| |||||||||||||||| || ||||||||||| |||||||||    
T  38663137 atttttgagggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 38663211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 496
Target Start/End: Original strand, 6771374 - 6771503
Alignment:
Q  367 tttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttg 466  Q
    ||||| ||||||||||||||||| || ||||| || ||||||||| ||| |||||||||||||| |||| ||| ||||   |||| |||||  |||||||    
T  6771374 ttttttatggacaaaatattattttgatattttagtcaacttgtatgtgggagaaaaagttgtgttgtgatttagtgagtgacaagaattttagtttttg 6771473  T
Q  467 tcctgtcatttgcctcaaatttatcctgtc 496  Q
    || ||||  ||| ||| |||||||| ||||    
T  6771474 tcttgtcccttgtctctaatttatcatgtc 6771503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 7183923 - 7184052
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    ||||||||  ||||||||| |||  |||||||| |||||||||||||||  || ||||||||||| ||||||||||| | | |||| ||| |  ||||||    
T  7183923 atttttgagagacaaaatactatattggtattttagacaacttgtacgtaggacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagttttt 7184022  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  7184023 gtcctgtcccttgcctccagtttgtcctgt 7184052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 495
Target Start/End: Complemental strand, 41967998 - 41967889
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaa 485  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||| | | |||| ||| |  ||||||||| ||||  ||||||| |     
T  41967998 tattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttgtcttgtctcttgcctctag 41967899  T
Q  486 tttatcctgt 495  Q
    ||| ||||||    
T  41967898 tttgtcctgt 41967889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 11772801 - 11772685
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||| ||||| |||| |||||||||| |||| ||||| ||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  11772801 atttttgggggacgaaatactattttggtatttaaaacaatttgtaggtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatcagttttt 11772702  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||| |||| ||||||||    
T  11772701 gtcttgtcctttgcctc 11772685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 365 - 473
Target Start/End: Complemental strand, 16476325 - 16476217
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    ||||||||  |||||||||  |||| |||||||| |||||||||||||||| || |||||||||||  |||||||||||| | |||| ||| |  |||||    
T  16476325 aatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaaaatatgagtttt 16476226  T
Q  465 tgtcctgtc 473  Q
    | |||||||    
T  16476225 tatcctgtc 16476217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 482
Target Start/End: Complemental strand, 44738183 - 44738095
Alignment:
Q  394 tatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||||| | |||| ||| |  ||||| ||||||||  |||||||    
T  44738183 tattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttggtcctgtcccttgcctc 44738095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 481
Target Start/End: Original strand, 25539880 - 25539975
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcct 481  Q
    |||| |||||||||| |||||||||| ||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||||| |||| |||||||    
T  25539880 tattttggtatttaaaacaacttgtaggtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcttgtcctttgcct 25539975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 39281899 - 39282006
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||| |||| ||||| |||||||| |||||||||||||||  || ||||||||||  ||||||||||||| | |||| ||| |  ||||||    
T  39281899 atttttggaggacgaaatgttattttggtattttagacaacttgtacgtaggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagttttt 39281998  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  39281999 gtcctgtc 39282006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 366 - 440
Target Start/End: Original strand, 46154905 - 46154979
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttg 440  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||| ||| || ||||||||||| ||| |||||    
T  46154905 atttttgaaggacaaaatgttattttggtattttagacaacttgtaagtgggacaaaaagttgtgctgtagtttg 46154979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 482
Target Start/End: Complemental strand, 24339788 - 24339691
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtgg-tttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    |||| |||||||| |||||||||||||||| || ||||||||||| ||||| |||||||| | |||| ||| |  ||||||||||||||  |||||||    
T  24339788 tattttggtattttagacaacttgtacgtgggaaaaaaagttgtgttgtggttttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctc 24339691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 51264500 - 51264629
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||| | |||||||||  |||| | |||||| | |||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  51264500 atttttaaaggacaaaatgctattttagtattttaaacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 51264599  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||| ||||  ||||||| | ||| ||||||    
T  51264600 gtcttgtcccttgcctccagtttgtcctgt 51264629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 500
Target Start/End: Complemental strand, 6144145 - 6144021
Alignment:
Q  376 gacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcat 475  Q
    |||||||| ||||| | || ||| ||||||||| |||||| |||||||||||||| |||||||||  || | |||| ||||   ||||||||||||||      
T  6144145 gacaaaatgttatttttgtgttttagacaacttctacgtgggagaaaaagttgtgttgtggtttgccgagggacaaaaattgcagtttttgtcctgtccc 6144046  T
Q  476 ttgcctcaaatttatcctgtctctg 500  Q
    ||||||| | ||| || ||||||||    
T  6144045 ttgcctccagtttgtcatgtctctg 6144021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 15540059 - 15539943
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||| ||||| |||| ||| ||||||||| |||||  || ||||||||||| ||||||||||||||  |||| | |||  | ||||    
T  15540059 atttttgggggacaaaatgttattttggtgttttagacaacttctacgtatgacaaaaagttgtgctgtggtttggtgaaagacaaaagtttcaggtttt 15539960  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  15539959 gtcctgtctcttgcctc 15539943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 451
Target Start/End: Complemental strand, 49303514 - 49303438
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaa 451  Q
    ||||||||| ||||| | |||||| |||||||||||||||  || ||||| ||||| ||||||||||||||| ||||    
T  49303514 ggacaaaatgttattttagtattttagacaacttgtacgtaggataaaaaattgtgctgtggtttggtgaaggacaa 49303438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 465
Target Start/End: Original strand, 570390 - 570492
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtg--atgtggtttggtgaagaacaataatttatgtt 462  Q
    |||||||| |||| ||||| ||||| || ||||| ||||||||| |||| |||| |||||||||||   ||||||||||||| | |||| ||||| ||||    
T  570390 aatttttggtggaaaaaatgttattttgatattttagacaacttatacgcgagacaaaaagttgtgcattgtggtttggtgagggacaaaaatttctgtt 570489  T
Q  463 ttt 465  Q
    |||    
T  570490 ttt 570492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 488
Target Start/End: Original strand, 5109733 - 5109855
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    ||||||||  ||||||||| ||||| ||  |||| ||||||||||||| |  || ||||||||||||||||||||||||| | |||| ||  |  |||||    
T  5109733 aatttttgggggacaaaatgttattttgc-attttagacaacttgtactttggacaaaaagttgtgatgtggtttggtgagggacaaaaacatgagtttt 5109831  T
Q  465 tgtcctgtcatttgcctcaaattt 488  Q
    |||||||||  ||||||| |||||    
T  5109832 tgtcctgtcccttgcctccaattt 5109855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 495
Target Start/End: Complemental strand, 38087131 - 38087036
Alignment:
Q  400 agacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||||||| || || |||||||||||||||||||| |||||| |||| ||| |  ||||||||| ||||  |||| || | ||||||||||    
T  38087131 agacaacttgtacttgggacaaaaagttgtgatgtggtttagtgaaggacaaaaatatgagtttttgtcatgtccattgcatccattttatcctgt 38087036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 495
Target Start/End: Complemental strand, 51703330 - 51703204
Alignment:
Q  368 ttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgt 467  Q
    |||||| ||||||||| ||||| | |||||| ||||||| |||| ||| || ||||||||||| ||||| ||||||| |||||| ||| |  ||||||||    
T  51703330 ttttgagggacaaaatgttatttttgtattttagacaacatgtaggtgggacaaaaagttgtgttgtgg-ttggtgaggaacaaaaatatgagtttttgt 51703232  T
Q  468 cctgtcatttgcctcaaatttatcctgt 495  Q
     |||||  ||||||  | ||||||||||    
T  51703231 tctgtcccttgccttcagtttatcctgt 51703204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 496
Target Start/End: Original strand, 39792840 - 39792942
Alignment:
Q  394 tatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaatttatcct 493  Q
    ||||| |||||| |||||||||| | || |||||||| ||||||||||||||| |||| |||||   |||||||| | || |||| ||| |||||||| |    
T  39792840 tattttagacaatttgtacgtgaaacaacaagttgtgttgtggtttggtgaaggacaagaatttcaatttttgtcatatcttttgtctccaatttatctt 39792939  T
Q  494 gtc 496  Q
    |||    
T  39792940 gtc 39792942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 444
Target Start/End: Original strand, 45658846 - 45658904
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||| |||||||||| |||||||||| ||| || ||||||||||| |||||||||||||    
T  45658846 tattttggtatttaaaacaacttgtaggtgggacaaaaagttgtgttgtggtttggtga 45658904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 442
Target Start/End: Original strand, 7837149 - 7837214
Alignment:
Q  377 acaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggt 442  Q
    |||||||| |||| || ||||| |||||||||||  |||||| |||||||||||||||| ||||||    
T  7837149 acaaaatactattttgatattttagacaacttgtctgtgagacaaaaagttgtgatgtgatttggt 7837214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 42512939 - 42512810
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| || ||||| |||||| ||||||||  || ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  42512939 atttttgggggacaaaattctattttgatattttagacaatttgtacgtaggacaaaaagttgtgttgtggtttgctgaggcacaaaaatatcagttttt 42512840  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  42512839 gtcctgtctcttgcctccagtttgtcctgt 42512810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 434
Target Start/End: Original strand, 46447669 - 46447737
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgt 434  Q
    ||||||||||||||||| | |||| || ||||| ||| ||||||||||||  | |||||||||||||||    
T  46447669 atttttgatggacaaaagactattttgatattttagataacttgtacgtggaacaaaaagttgtgatgt 46447737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 3415022 - 3414915
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| |||||||| | |||||| ||||||| || ||||| || |||||| ||||||||| | |||| ||| |  ||||||    
T  3415022 atttttgggggacaaaatgctattttggtattttaaacaactagtacgtgggataaaaaattatgatgtagtttggtgagggacaaaaatatgagttttt 3414923  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  3414922 gtcctgtc 3414915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 42705407 - 42705329
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||  |||||||||  |||| ||  |||| |||||||||||||||| ||  |||||||||| |||||||||||||    
T  42705407 atttttgggggacaaaatgctattttgacatttcagacaacttgtacgtgggacgaaaagttgtgttgtggtttggtga 42705329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 440
Target Start/End: Original strand, 50304656 - 50304730
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttg 440  Q
    |||||||  |||||||||  |||| || ||||| |||||||||  |||||||| ||||||||||| |||||||||    
T  50304656 atttttggaggacaaaatgctattttgatattttagacaacttaaacgtgagacaaaaagttgtgctgtggtttg 50304730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 488
Target Start/End: Original strand, 10384413 - 10384494
Alignment:
Q  407 ttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaattt 488  Q
    ||||||||| || ||||||||||| |||||||| |||||| |||| ||| |  ||||||||| |||| ||||| || |||||    
T  10384413 ttgtacgtgggacaaaaagttgtgctgtggtttagtgaaggacaaaaatatgagtttttgtcttgtcctttgcatccaattt 10384494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 415
Target Start/End: Complemental strand, 20495060 - 20495011
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtg 415  Q
    |||||||| |||||||||  |||| |||||||| ||||||||||||||||    
T  20495060 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtg 20495011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 371
Target Start/End: Complemental strand, 25343431 - 25343390
Alignment:
Q  330 agaacaacataagacaaatttttatgatgttgaataattttt 371  Q
    ||||||||| |||||||||||||||||  |||||||||||||    
T  25343431 agaacaacacaagacaaatttttatgacattgaataattttt 25343390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 457
Target Start/End: Complemental strand, 34283947 - 34283894
Alignment:
Q  404 aacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataattt 457  Q
    ||||||||||||||| ||||||||||| ||||||||  ||||  ||||||||||    
T  34283947 aacttgtacgtgagataaaaagttgtgttgtggtttattgaaagacaataattt 34283894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 25343378 - 25343274
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||| ||||| |||| |||  |||  ||||||||||||||| || ||||||||||  | |||||| |||||| |||| ||| | |||||||    
T  25343378 atttttgagggacgaaatactattttggatttttggacaacttgtacgtgcgacaaaaagttgtactatggtttagtgaaggacaaaaatatgtgttttt 25343279  T
Q  466 gtcct 470  Q
     ||||    
T  25343278 atcct 25343274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 473
Target Start/End: Original strand, 26733571 - 26733667
Alignment:
Q  377 acaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||||| | |||| |||||||| ||||||||||||| ||||  ||||||||||| | |||||| |||  | |||| |||||  ||||||||| ||||    
T  26733571 acaaaagactattttggtattttagacaacttgtacatgaggcaaaaagttgtgttatggtttagtgggggacaagaatttcagtttttgtcatgtc 26733667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 6e-26; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 2351676 - 2351792
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  2351676 atttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 2351775  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||| |||||||    
T  2351776 gtcctgtcacttgcctc 2351792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 7523168 - 7523297
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||| | |||| ||| |  ||||||    
T  7523168 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 7523267  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  7523268 gtcctgtcccttgcctccagtttgtcctgt 7523297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 39918503 - 39918619
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  39918503 atttttgggggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 39918602  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  39918603 gtcctgtcccttgcctc 39918619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 365 - 495
Target Start/End: Complemental strand, 21739262 - 21739132
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    ||||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  |||||    
T  21739262 aatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 21739163  T
Q  465 tgtcctgtcatttgcctcaaatttatcctgt 495  Q
    |||||||||  ||||||| | ||| ||||||    
T  21739162 tgtcctgtcccttgcctccagtttgtcctgt 21739132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 3735353 - 3735469
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  3735353 atttttggaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgatggacaaaaatatcagttttt 3735452  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  3735453 gtcctgtccattgcctc 3735469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 32528711 - 32528818
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  32528711 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 32528810  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  32528811 gtcctgtc 32528818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 378 - 488
Target Start/End: Original strand, 24036238 - 24036348
Alignment:
Q  378 caaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcattt 477  Q
    |||||| ||||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||| | |||| ||| |  | ||||||||||||  ||    
T  24036238 caaaatgttattttggtattttagacaacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaatatgagattttgtcctgtccctt 24036337  T
Q  478 gcctcaaattt 488  Q
    ||||| |||||    
T  24036338 gcctccaattt 24036348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 481
Target Start/End: Original strand, 39788202 - 39788304
Alignment:
Q  379 aaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttg 478  Q
    ||||| ||||| | |||||| |||||||||||||||| || ||||||||||||||||||||||||| | |||| ||| |  |||||||||||||| ||||    
T  39788202 aaaatgttattttagtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttg 39788301  T
Q  479 cct 481  Q
    |||    
T  39788302 cct 39788304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 375 - 451
Target Start/End: Complemental strand, 700692 - 700616
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaa 451  Q
    |||||||||| |||| |||||||| ||| ||||||||||||||| ||||||||||| ||||||||||||| ||||||    
T  700692 ggacaaaataatattttggtattttagataacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggaacaa 700616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 31770691 - 31770575
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | | || ||| |  ||||||    
T  31770691 atttttgagggacaaaatgctattttggtatttcagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggataaaaatatgagttttt 31770592  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  31770591 gtcctgtcccttgcctc 31770575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 375 - 495
Target Start/End: Complemental strand, 31880167 - 31880047
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtca 474  Q
    |||||||||  |||| |||||||| |||||||||||||||  || ||| ||||||||||||||||||||| | |||| ||| |  |||||||||||||||    
T  31880167 ggacaaaatgctattttggtattttagacaacttgtacgtaggacaaatagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtca 31880068  T
Q  475 tttgcctcaaatttatcctgt 495  Q
     ||||||| | ||| ||||||    
T  31880067 cttgcctccagtttgtcctgt 31880047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 495
Target Start/End: Complemental strand, 7770365 - 7770250
Alignment:
Q  380 aaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgc 479  Q
    |||| ||||| | |||||| || ||||||||||||| || ||||||||||| ||||||||||||||| |||| ||| | |||||||||||||||  ||||    
T  7770365 aaatgttatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgtgtttttgtcctgtcccttgc 7770266  T
Q  480 ctcaaatttatcctgt 495  Q
    ||| | ||| ||||||    
T  7770265 ctccagtttgtcctgt 7770250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 7208330 - 7208252
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| | |||||||  |||| |||||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  7208330 atttttgaggaacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtga 7208252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 377 - 495
Target Start/End: Original strand, 34794894 - 34795012
Alignment:
Q  377 acaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatt 476  Q
    |||||||  |||| |||||||| ||||||||| |||||| || ||||||||||||||||||||||||| | |||| ||| |  ||||||||||||||  |    
T  34794894 acaaaatgctattttggtattttagacaacttatacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtccct 34794993  T
Q  477 tgcctcaaatttatcctgt 495  Q
    |||||| | ||| ||||||    
T  34794994 tgcctctagtttgtcctgt 34795012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 472
Target Start/End: Complemental strand, 41790562 - 41790456
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||| ||||| | |||||| |||||| |||||||||||| ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  41790562 atttttgggggacaaaatgttattttagtattttagacaatttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 41790463  T
Q  466 gtcctgt 472  Q
    |||||||    
T  41790462 gtcctgt 41790456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 375 - 444
Target Start/End: Original strand, 553402 - 553471
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    ||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||| |||||||||||||    
T  553402 ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtga 553471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 11963337 - 11963466
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||| ||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  11963337 atttttgagggacaaaatgctattttggtattttagacaacttgcacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 11963436  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||| ||||  ||||||| | ||| ||||||    
T  11963437 gtcatgtcccttgcctccagtttgtcctgt 11963466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 23091404 - 23091275
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| || ||||| |||||| || ||||||||| ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  23091404 atttttgagggacaaaatgttattttgatattttagacaatttatacgtgagacaaaaagttgtgttgtggtttgatgacggacaaaaatatgagttttt 23091305  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||| ||||  ||||||| | ||||||||||    
T  23091304 gtcttgtcccttgcctccagtttatcctgt 23091275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 35701273 - 35701402
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| ||||||||||||||||  | |||||||| || ||||||||||||| | |||| ||| |  ||||||    
T  35701273 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttatgttgtggtttggtgagggacaaaaatatgagttttt 35701372  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  35701373 gtcctgtcccttgcctccagtttgtcctgt 35701402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 365 - 482
Target Start/End: Original strand, 40489332 - 40489449
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    ||||||||| ||||||||| ||||| |||||||| |||||||||||| ||| || ||||||||||| |||| |||||||| | |||| ||| |  |||||    
T  40489332 aatttttgagggacaaaatgttattttggtattttagacaacttgtatgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttt 40489431  T
Q  465 tgtcctgtcatttgcctc 482  Q
    ||||| |||  |||||||    
T  40489432 tgtcccgtcccttgcctc 40489449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 375 - 479
Target Start/End: Complemental strand, 8561073 - 8560969
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtca 474  Q
    |||| |||| ||||| |||||||| ||||||||||||| ||  | ||||||||||||||||||||||||| |||||| ||| |  ||||||||| ||||     
T  8561073 ggacgaaatgttattttggtattttagacaacttgtacctggaacaaaaagttgtgatgtggtttggtgaggaacaaaaatatcagtttttgtcttgtcc 8560974  T
Q  475 tttgc 479  Q
    |||||    
T  8560973 tttgc 8560969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 375 - 495
Target Start/End: Complemental strand, 22493510 - 22493390
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtca 474  Q
    |||||||||  |||| || ||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||||| ||||     
T  22493510 ggacaaaatgctattttgatattttagacaacttgtacgtgtgacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcttgtcc 22493411  T
Q  475 tttgcctcaaatttatcctgt 495  Q
    |||| ||| | ||||||||||    
T  22493410 tttggctccagtttatcctgt 22493390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 28090620 - 28090504
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| | |||||| |||||||||||||||| || ||||||||||| ||| ||||||||| | |||| ||| |  ||||||    
T  28090620 atttttgagggacaaaatgttatttttgtattttagacaacttgtacgtgggacaaaaagttgtgttgtagtttggtgagggacaaaaatatgagttttt 28090521  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||| ||||  |||||||    
T  28090520 gtcatgtcccttgcctc 28090504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 495
Target Start/End: Complemental strand, 32093084 - 32092953
Alignment:
Q  363 ataatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtt 462  Q
    ||||||||||  |||| ||||  |||| |||||||| ||| || ||||||||| || ||||||||||| |||||||||||| || |||| |||||  |||    
T  32093084 ataatttttgggggacgaaatgctattttggtattttagataatttgtacgtgggacaaaaagttgtgctgtggtttggtg-aggacaaaaatttcagtt 32092986  T
Q  463 tttgtcctgtcatttgcctcaaatttatcctgt 495  Q
    |||||||| || |||||||| ||||| ||||||    
T  32092985 tttgtcctatcctttgcctccaatttgtcctgt 32092953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 500
Target Start/End: Original strand, 8136852 - 8136967
Alignment:
Q  385 ttattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaa 484  Q
    ||||| |||||||| |||||||||||||||  || ||||||||||| ||||||||||||| | |||| ||| |  ||||||||||||||  ||||||| |    
T  8136852 ttattttggtattttagacaacttgtacgtaggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctcca 8136951  T
Q  485 atttatcctgtctctg 500  Q
     ||| |||||| ||||    
T  8136952 gtttgtcctgtatctg 8136967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 482
Target Start/End: Complemental strand, 4689784 - 4689682
Alignment:
Q  380 aaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgc 479  Q
    |||| ||||| | |||||| || ||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| | |||||||||||||||  ||||    
T  4689784 aaatgttatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgtgtttttgtcctgtcccttgc 4689685  T
Q  480 ctc 482  Q
    |||    
T  4689684 ctc 4689682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 4818240 - 4818162
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||| | |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| |||||||||||||    
T  4818240 attttttagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 4818162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 40182460 - 40182538
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    ||||||||  ||||||||  |||| |||||||| ||||||||||||| || || |||||||||||||||||||||||||    
T  40182460 atttttgagagacaaaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgatgtggtttggtga 40182538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 375 - 444
Target Start/End: Original strand, 31644451 - 31644520
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| |||||||||||||    
T  31644451 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtga 31644520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 6284399 - 6284291
Alignment:
Q  366 atttttgatggacaaaatattattgt-ggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    |||||||| |||||||||  |||| | |||||||  ||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||  || |||||    
T  6284399 atttttgagggacaaaatgctatttttggtattttggacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaaaataagtttt 6284300  T
Q  465 tgtcctgtc 473  Q
    |||||||||    
T  6284299 tgtcctgtc 6284291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 494
Target Start/End: Complemental strand, 22432389 - 22432281
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaa 485  Q
    |||| |||||||| ||||||||||||| ||||| ||||| ||||| ||||||||| ||| | |||| ||| |  ||||||||||||||  ||||||| |     
T  22432389 tattttggtattttagacaacttgtacttgagacaaaaaattgtgttgtggtttgatgagggacaaaaatatcagtttttgtcctgtctcttgcctccag 22432290  T
Q  486 tttatcctg 494  Q
    |||||||||    
T  22432289 tttatcctg 22432281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 470
Target Start/End: Original strand, 5598485 - 5598580
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcct 470  Q
    |||| |||| ||||| || ||||| |||||| |||||||||||| ||||||||||| ||| ||||| ||||| |||| ||| | ||||||||||||    
T  5598485 ggacgaaatgttattttgatattttagacaagttgtacgtgagacaaaaagttgtgctgttgtttgatgaaggacaaaaatatctgtttttgtcct 5598580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 375 - 473
Target Start/End: Complemental strand, 18470519 - 18470421
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||| |||| ||||| |||| ||| |||||||||||||||| || ||||||||||| ||||||||||| | | |||| |||||  ||||||||| ||||    
T  18470519 ggacgaaatgttattttggtgttttagacaacttgtacgtgggataaaaagttgtgctgtggtttggtaagggacaaaaatttcagtttttgtcttgtc 18470421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 375 - 473
Target Start/End: Complemental strand, 24181715 - 24181617
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||||||||  |||| |||||||| ||||||||| |||||| || |||||||| || ||||||||||||| | |||| ||| |  ||||||||||||||    
T  24181715 ggacaaaatgctattttggtattttagacaacttatacgtgggacaaaaagttatgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtc 24181617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 386 - 464
Target Start/End: Complemental strand, 27839153 - 27839075
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    |||| |||||||| ||||||||||||| ||||| ||||||||||  | ||||||||||| | |||| ||||||||||||    
T  27839153 tattttggtattttagacaacttgtacatgagacaaaaagttgttttatggtttggtgagggacaaaaatttatgtttt 27839075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 41459585 - 41459663
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| ||||||||| ||||| || ||||| ||||||||||||||||  | ||||||||||| | |||||||||||    
T  41459585 atttttgagggacaaaatgttattttgatattttagacaacttgtacgtggaacaaaaagttgtgctctggtttggtga 41459663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 495
Target Start/End: Complemental strand, 5571724 - 5571615
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaa 485  Q
    |||| |||||||| |||||||||||||||  || ||||||||||| ||||||||||||| | |||| ||| |   |||||||||||||  ||||||| |     
T  5571724 tattttggtattttagacaacttgtacgttggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgaatttttgtcctgtcccttgcctccag 5571625  T
Q  486 tttatcctgt 495  Q
    ||| ||||||    
T  5571624 tttgtcctgt 5571615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 366 - 441
Target Start/End: Original strand, 29241374 - 29241449
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttgg 441  Q
    |||||||| |||||||||  |||| || ||||| || ||||||||||||| || ||||||||||| ||||||||||    
T  29241374 atttttgagggacaaaatgctattttgatattttagccaacttgtacgtgggacaaaaagttgtgctgtggtttgg 29241449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 488
Target Start/End: Original strand, 17031191 - 17031275
Alignment:
Q  404 aacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaattt 488  Q
    |||||||||||| ||  |||||||||| |||| |||  ||| |  ||| ||||||||||||||||||||| |||||||| |||||    
T  17031191 aacttgtacgtgggacgaaaagttgtgctgtgatttaatgaggggcaaaaatttatgtttttgtcctgtcctttgcctccaattt 17031275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 370
Target Start/End: Original strand, 31644382 - 31644429
Alignment:
Q  323 acaaagtagaacaacataagacaaatttttatgatgttgaataatttt 370  Q
    |||| ||||||||||| |||||||||||||||||  ||||||||||||    
T  31644382 acaaggtagaacaacacaagacaaatttttatgacattgaataatttt 31644429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 40563881 - 40563842
Alignment:
Q  335 aacataagacaaatttttatgatgttgaataatttttgat 374  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  40563881 aacacaagacaaatttttatgatattgaataatttttgat 40563842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 354
Target Start/End: Complemental strand, 22432493 - 22432435
Alignment:
Q  296 agtaagtattggacataacagcaaaacacaaagtagaacaacataagacaaatttttat 354  Q
    |||||||| | |||| ||||||| ||||||| ||||||||||| | |||||||||||||    
T  22432493 agtaagtactagacagaacagcacaacacaaggtagaacaacacatgacaaatttttat 22432435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 496
Target Start/End: Complemental strand, 26180353 - 26180264
Alignment:
Q  407 ttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaatttatcctgtc 496  Q
    ||||||||  || ||||||||||||| |||||| ||||||||| | || |||| |||||||| | || |||| ||| |||||||| ||||    
T  26180353 ttgtacgtaggataaaaagttgtgatatggtttagtgaagaactaaaaattatatttttgtcatatcttttgtctccaatttatcatgtc 26180264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 9e-25; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 365 - 495
Target Start/End: Complemental strand, 37618502 - 37618372
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    ||||||||  |||| ||||  |||| |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| | |||| ||| |  |||||    
T  37618502 aatttttgggggacgaaatgctattttggtatttaaaacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttt 37618403  T
Q  465 tgtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||| |||||||| ||||| ||||||    
T  37618402 tgtcctgtcctttgcctccaatttgtcctgt 37618372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 3251765 - 3251636
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||||||  || ||||||||||||||||||||||||| | |||| ||| || ||||||    
T  3251765 atttttgagggacaaaatgttattttggtattttagacaacttgtacgtaggataaaaagttgtgatgtggtttggtgagggacaaaaatataagttttt 3251666  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    || |||||  ||||||| | ||| ||||||    
T  3251665 gttctgtcgcttgcctccagtttgtcctgt 3251636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 4052476 - 4052605
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  4052476 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 4052575  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| ||||| ||||||    
T  4052576 gtcctgtcccttgcctccaatttgtcctgt 4052605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 29563335 - 29563206
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||| |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  29563335 atttttgagggacaaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 29563236  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  29563235 gtcctgtcccttgcctcgagtttgtcctgt 29563206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 5968973 - 5968857
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| |||||||| |||||| ||||||||| || ||||||||||| ||||||||||||||| |||| ||| |  ||||||    
T  5968973 atttttgagggacaaaatgttattttggtattttagacaatttgtacgtgggataaaaagttgtgctgtggtttggtgaaggacaaaaatatgagttttt 5968874  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  5968873 gtcctgtcccttgcctc 5968857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 366 - 481
Target Start/End: Complemental strand, 12753434 - 12753319
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||| ||||| |||||||| |||||||||||| ||| || ||||||||||| ||||||||||||| |||||| ||| |  ||||||    
T  12753434 atttttgggggacaaaatgttattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgaggaacaaaaatatgagttttt 12753335  T
Q  466 gtcctgtcatttgcct 481  Q
    ||| ||||||||||||    
T  12753334 gtcttgtcatttgcct 12753319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 365 - 495
Target Start/End: Complemental strand, 14005154 - 14005024
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    ||||||| ||||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  |||||    
T  14005154 aattttttatggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgatggacaaaaatatgagtttt 14005055  T
Q  465 tgtcctgtcatttgcctcaaatttatcctgt 495  Q
    |||| ||||  ||||||| | ||| ||||||    
T  14005054 tgtcttgtcccttgcctccagtttgtcctgt 14005024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 37664392 - 37664263
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    ||||||||  ||||||||  |||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||| | |||| ||| |  ||||||    
T  37664392 atttttgagcgacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 37664293  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  37664292 gtcctgtcccttgcctctagtttgtcctgt 37664263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 41709773 - 41709902
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| ||| |||||||||||  || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  41709773 atttttgagggacaaaatgctattttggtattttagataacttgtacgttggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 41709872  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||||||||||| | ||| ||||||    
T  41709873 gtcctgtcatttgcctccagtttgtcctgt 41709902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 366 - 470
Target Start/End: Original strand, 6386572 - 6386676
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  6386572 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 6386671  T
Q  466 gtcct 470  Q
    |||||    
T  6386672 gtcct 6386676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 7394923 - 7394807
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||| | ||||||||||| | |||| ||| |  ||||||    
T  7394923 atttttgaaggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgttatggtttggtgagggacaaaaatatgagttttt 7394824  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||| ||||  |||||||    
T  7394823 gtcatgtcccttgcctc 7394807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 8673164 - 8673048
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  8673164 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 8673065  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  8673064 gtcctgtcccttgcctc 8673048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 45446451 - 45446567
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| |||||| ||| |  ||||||    
T  45446451 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagttttt 45446550  T
Q  466 gtcctgtcatttgcctc 482  Q
     |||||||  |||||||    
T  45446551 atcctgtcccttgcctc 45446567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 366 - 472
Target Start/End: Complemental strand, 32303694 - 32303588
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  32303694 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 32303595  T
Q  466 gtcctgt 472  Q
    |||||||    
T  32303594 gtcctgt 32303588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 374 - 499
Target Start/End: Complemental strand, 10656787 - 10656662
Alignment:
Q  374 tggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||||||| | ||||| || ||||| |||||| |||||||||||| ||||||||||| |||||||| |||||| |||| || ||  ||||||||||||||    
T  10656787 tggacaaattgttattttgatattttagacaatttgtacgtgagacaaaaagttgtgttgtggttttgtgaaggacaaaaaattcagtttttgtcctgtc 10656688  T
Q  474 atttgcctcaaatttatcctgtctct 499  Q
     |||||||| | ||| || |||||||    
T  10656687 ttttgcctctagtttgtcatgtctct 10656662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 29672432 - 29672303
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| ||| |||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  29672432 atttttgagggacaaaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 29672333  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  29672332 gtcctgtcccttgcctctagtttgtcctgt 29672303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 34063124 - 34063253
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| |||||||||| || | |||| ||| |  ||||||    
T  34063124 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggcgagggacaaaaatatgagttttt 34063223  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  34063224 gtcctgtcccttgcctccagtttgtcctgt 34063253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 375 - 495
Target Start/End: Original strand, 17805696 - 17805816
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtca 474  Q
    ||||||||| ||||| |||||||| ||||||||||||||||||| ||| ||||||| | ||||||||||| |||||| ||| |  ||||||||| ||||     
T  17805696 ggacaaaatgttattttggtattttagacaacttgtacgtgagacaaagagttgtgctttggtttggtgaggaacaaaaatatgagtttttgtcttgtcc 17805795  T
Q  475 tttgcctcaaatttatcctgt 495  Q
     ||||||| | ||| ||||||    
T  17805796 cttgcctctagtttgtcctgt 17805816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 30543131 - 30543015
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||| ||||| |||||||| |||||||||||||||| ||  |||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  30543131 atttttgggggacaaaatgttattttggtattttagacaacttgtacgtgggacgaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 30543032  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  30543031 gtcctgtccattgcctc 30543015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 493
Target Start/End: Complemental strand, 22756527 - 22756393
Alignment:
Q  359 ttgaataatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataattta 458  Q
    |||||||||||||| |||| |||| | |||| | |||||| ||| ||||||||||||| | ||||||||||| |||||| |  ||| | | || ||||||    
T  22756527 ttgaataatttttggtggataaaaaactatttttgtattttagataacttgtacgtgatacaaaaagttgtgttgtggtataatgagggataaaaattta 22756428  T
Q  459 tgtttttgtcctgtcatttgcctcaaatttatcct 493  Q
    |||||||||| ||||  ||||||||||||| ||||    
T  22756427 tgtttttgtcttgtctcttgcctcaaatttgtcct 22756393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 484
Target Start/End: Original strand, 31732060 - 31732178
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||| |||||| ||||||||||  ||||||||||||| | |||| ||| |  ||||||    
T  31732060 atttttgagggacaaaatgctattttggtattttagacaacttgtatgtgagacaaaaagttgtactgtggtttggtgagggacaaaaatatgagttttt 31732159  T
Q  466 gtcctgtcatttgcctcaa 484  Q
    ||| ||||  |||||||||    
T  31732160 gtcatgtcccttgcctcaa 31732178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 32020110 - 32020032
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| |||||||||| |||| |||||||| ||||||||||||||||  | ||||||||||| |||||||||||||    
T  32020110 atttttgagggacaaaatactattttggtattttagacaacttgtacgtggaacaaaaagttgtgctgtggtttggtga 32020032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 31513692 - 31513576
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| ||||||||||||| |  || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  31513692 atttttgaaggacaaaatgctattttggtattttagacaacttgtacctaggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 31513593  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  31513592 gtcctgtcccttgcctc 31513576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 6460257 - 6460336
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgaga-gaaaaagttgtgatgtggtttggtga 444  Q
    |||||| ||||||||||| ||||| |||||||| ||||||||| |||||| ||  |||||||||||||||||||||||||    
T  6460257 attttttatggacaaaatgttattttggtattttagacaacttatacgtgggacaaaaaagttgtgatgtggtttggtga 6460336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 21272680 - 21272787
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||| | |||||||||  |||| | |||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  21272680 atttttaaaggacaaaatgctattttagtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 21272779  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  21272780 gtcctgtc 21272787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 386 - 496
Target Start/End: Original strand, 15001482 - 15001592
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaa 485  Q
    |||| |||||||| ||| |||||||||||| || ||||||||||| ||||||||||||| | |||| |||||  |||||||| |||||  ||||||| |     
T  15001482 tattttggtattttagataacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgttctgtctattgcctccag 15001581  T
Q  486 tttatcctgtc 496  Q
    ||| |||||||    
T  15001582 tttgtcctgtc 15001592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 482
Target Start/End: Original strand, 30501155 - 30501257
Alignment:
Q  380 aaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgc 479  Q
    |||| ||||| | |||||| || ||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| | |||||||||||||||  ||||    
T  30501155 aaatgttatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgtgtttttgtcctgtcccttgc 30501254  T
Q  480 ctc 482  Q
    |||    
T  30501255 ctc 30501257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 10467060 - 10467189
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| || ||||| |||||||||||||||| || ||||||||||| ||||||||| ||| |||||| ||| |  ||||||    
T  10467060 atttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgaggaacaaaaatatcagttttt 10467159  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||| ||||  ||||||| | ||| ||||||    
T  10467160 gtcttgtctcttgcctccagtttgtcctgt 10467189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 27103955 - 27104084
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| || ||||| |||||||||||||||| || |||||||||||  |||||||||||| | |||| ||| |  ||||||    
T  27103955 atttttgagggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgcagtggtttggtgagggacaaaaatatgagttttt 27104054  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||| ||||  ||||||| | ||| ||||||    
T  27104055 gtcatgtcccttgcctccagtttgtcctgt 27104084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 495
Target Start/End: Original strand, 37861789 - 37861984
Alignment:
Q  296 agtaagtattggacataacagcaaaacacaaagtagaacaacataagacaaattttt-atgatgttgaataatttttgatggacaaaatattattgtggt 394  Q
    |||||||| |||||| ||||| | ||||||| | |||||| || | ||||||||||| |||   |||| ||||||||     |||||||  |||| ||||    
T  37861789 agtaagtactggacagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttt-----acaaaatgctattttggt 37861883  T
Q  395 atttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaatttatcctg 494  Q
    |||| |||||||||||||||  || ||| |||| |||||||||||||||| | | || ||| |  ||||||||||||||| ||||||| | ||| |||||    
T  37861884 attttagacaacttgtacgtaggacaaatagttatgatgtggtttggtgagggataaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctg 37861983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 41548614 - 41548730
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||| ||||| || ||||| |||||||||||||||| || ||||||||||| |||||| || ||| | |||| ||| |  ||||||    
T  41548614 atttttgggggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtctgctgaggtacaaaaatatcagttttt 41548713  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  41548714 gtcctgtctcttgcctc 41548730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 496
Target Start/End: Original strand, 35225685 - 35225788
Alignment:
Q  393 gtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaatttatcc 492  Q
    |||||| ||||||||||||| || || |||||||||||||||||||||| || | |||| ||||   ||||||||||||||  ||||||| | ||| |||    
T  35225685 gtattttagacaacttgtacttgtgacaaaaagttgtgatgtggtttggcgagggacaaaaattgcagtttttgtcctgtcccttgcctccagtttgtcc 35225784  T
Q  493 tgtc 496  Q
    ||||    
T  35225785 tgtc 35225788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 34101504 - 34101582
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| |||||||||  |||| |||||||| ||||||||||||||||  | |||||||| || |||||||||||||    
T  34101504 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtggaaaaaaaagttatgttgtggtttggtga 34101582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 7591556 - 7591427
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| || ||||| ||||||||| |||||| || ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  7591556 atttttgggggacaaaatgctattttgatattttagacaacttatacgtgtgacaaaaagttgtgttgtggtttgctgaggcacaaaaatatcagttttt 7591457  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  7591456 gtcctgtctcttgcctccagtttgtcctgt 7591427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 465
Target Start/End: Complemental strand, 10320376 - 10320287
Alignment:
Q  376 gacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||| || ||||| |||||||||||||||| |  ||||||||||| ||||||||||||| | | || ||||| |||||||    
T  10320376 gacaaaatgttattttgatattttagacaacttgtacgtgtggtaaaaagttgtgttgtggtttggtgagggataagaatttctgttttt 10320287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 482
Target Start/End: Complemental strand, 29611144 - 29611048
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    |||| |||| ||| ||||||||| |||||| || ||||||||||| |||||||||| || | |||| |||||  ||||||||||||||  |||||||    
T  29611144 tattttggtgttttagacaacttttacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatttcagtttttgtcctgtcccttgcctc 29611048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 374 - 473
Target Start/End: Original strand, 54175 - 54273
Alignment:
Q  374 tggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||| ||||||||||| || |||||  || |||||||| ||| || |||||||||||||||||||| |  ||| |||| |||||||||||||||| ||||    
T  54175 tggataaaatattattttg-tattttcgataacttgtatgtgggacaaaaagttgtgatgtggtttagcaaaggacaaaaatttatgtttttgtcatgtc 54273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 377 - 444
Target Start/End: Complemental strand, 13407033 - 13406966
Alignment:
Q  377 acaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||  |||| |||||||| ||||||||||||||||||| ||||| || || |||||||||||||    
T  13407033 acaaaatgctattttggtattttagacaacttgtacgtgagacaaaaaattatgctgtggtttggtga 13406966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 25478239 - 25478346
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||| | |||||||||| |||| |||||||| |||||||||||||||  || ||||||||||| |||| |||| ||| | |||| ||| |  ||||||    
T  25478239 attttttagggacaaaatactattttggtattttagacaacttgtacgtaggacaaaaagttgtgctgtgatttgatgagggacaaaaatatgagttttt 25478338  T
Q  466 gtcctgtc 473  Q
     |||||||    
T  25478339 ttcctgtc 25478346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 439
Target Start/End: Complemental strand, 36426348 - 36426283
Alignment:
Q  374 tggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggttt 439  Q
    ||||||||| | |||| |||||||| |||||||||||| |||||| |||||| |||| ||||||||    
T  36426348 tggacaaaagactattttggtattttagacaacttgtatgtgagacaaaaagatgtgttgtggttt 36426283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 495
Target Start/End: Original strand, 40389056 - 40389165
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaa 485  Q
    |||| ||| |||||| |||||||||| ||| || ||||||||||| |||||||||||||   | || ||| |  |||||||||||||| |||||||| |     
T  40389056 tattttggcatttaaaacaacttgtatgtgggacaaaaagttgtgctgtggtttggtgagagataaaaatatcagtttttgtcctgtcctttgcctccag 40389155  T
Q  486 tttatcctgt 495  Q
    ||| ||||||    
T  40389156 tttgtcctgt 40389165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 473
Target Start/End: Complemental strand, 3801025 - 3800945
Alignment:
Q  393 gtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||||| ||| |||| ||| |||| | ||||||||||||||||||||  ||| |||||| || ||||||||||||| ||||    
T  3801025 gtattttagataactagtatgtgaaacaaaaagttgtgatgtggtttaatgaggaacaaaaacttatgtttttgtcttgtc 3800945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 429
Target Start/End: Complemental strand, 3361844 - 3361789
Alignment:
Q  374 tggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgt 429  Q
    |||||||||| ||||| |||||  | ||||||||||||| ||||||||||||||||    
T  3361844 tggacaaaatgttattttggtagattagacaacttgtacttgagagaaaaagttgt 3361789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 444
Target Start/End: Original strand, 10932739 - 10932810
Alignment:
Q  373 atggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||||| | |||| |||||||| |||||| |||||||||  |  ||||||||||||||||||| ||||    
T  10932739 atggacaaaagactattttggtattttagacaaattgtacgtggaactaaaagttgtgatgtggtttagtga 10932810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 491
Target Start/End: Original strand, 17520626 - 17520715
Alignment:
Q  401 gacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaatttatc 491  Q
    ||||||||||| ||| || ||||||||||| ||||||||||||| | |||| ||| || ||||||| ||||||  ||||||| | ||||||    
T  17520626 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaa-aatataagtttttgccctgtcccttgcctccattttatc 17520715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 444
Target Start/End: Original strand, 39642899 - 39642957
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||| |||||||| ||||||| |||||||| || | ||||||||| |||||||||||||    
T  39642899 tattttggtattttagacaacctgtacgtgggacagaaagttgtgttgtggtttggtga 39642957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 473
Target Start/End: Original strand, 5892074 - 5892171
Alignment:
Q  376 gacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    ||||||| |||| | ||||| || ||||||||| |||||| || ||||||||||| |  |||||  ||||| ||||||||||  ||||||||| ||||    
T  5892074 gacaaaaaattaatttggtaatttagacaacttatacgtgtgacaaaaagttgtgttacggtttaatgaaggacaataatttcagtttttgtcttgtc 5892171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 451
Target Start/End: Complemental strand, 27109650 - 27109565
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaa 451  Q
    |||||||  |||| |||| ||||| |||||||| | |||| ||||||| | || ||||||||||| ||||||||||| | ||||||    
T  27109650 atttttgggggacgaaatgttattttggtattttaaacaatttgtacgcgggacaaaaagttgtgttgtggtttggtaaggaacaa 27109565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 473
Target Start/End: Complemental strand, 16595231 - 16595151
Alignment:
Q  393 gtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||||| ||| |||||||||||| || ||||||||||| ||||| || | || | |||| | || ||||||||||||||||    
T  16595231 gtattttagataacttgtacgtgggacaaaaagttgtgttgtggattagcgagggacaaaacttcatgtttttgtcctgtc 16595151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 45114071 - 45114155
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcct 470  Q
    |||| |||||||| ||||||||||||| |  || ||||||||||  ||||||||||||| | |||| ||| |  |||||||||||    
T  45114071 tattttggtattttagacaacttgtacctatgacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcct 45114155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 4e-24; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 2614892 - 2615021
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  2614892 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 2614991  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| ||||| ||||||    
T  2614992 gtcctgtcccttgcctccaatttgtcctgt 2615021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 375 - 495
Target Start/End: Complemental strand, 10324235 - 10324115
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtca 474  Q
    ||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| | |||| ||| |  ||||||||||||||     
T  10324235 ggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcc 10324136  T
Q  475 tttgcctcaaatttatcctgt 495  Q
     ||||||| | ||| ||||||    
T  10324135 cttgcctctagtttgtcctgt 10324115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 368 - 495
Target Start/End: Original strand, 24203360 - 24203487
Alignment:
Q  368 ttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgt 467  Q
    |||||| ||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||||    
T  24203360 ttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgt 24203459  T
Q  468 cctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||  ||||||| | ||| ||||||    
T  24203460 cctgtctcttgcctccagtttgtcctgt 24203487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 3932940 - 3932862
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||||||| || |||||||||||||||||||||||||    
T  3932940 atttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtga 3932862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 3259679 - 3259808
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  3259679 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 3259778  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  3259779 gtcctgtctcttgcctccagtttgtcctgt 3259808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 11279124 - 11279231
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||| |||||  |||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  11279124 atttttgagggataaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 11279223  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  11279224 gtcctgtc 11279231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 376 - 495
Target Start/End: Complemental strand, 15277403 - 15277284
Alignment:
Q  376 gacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcat 475  Q
    ||||||||  |||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||| | |||| ||| |  ||||||||||||||      
T  15277403 gacaaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtccc 15277304  T
Q  476 ttgcctcaaatttatcctgt 495  Q
    ||||||| | ||| ||||||    
T  15277303 ttgcctccagtttgtcctgt 15277284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 32409985 - 32409878
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||| |||| |||||||| |||||||||||  ||| || ||||||||||||||||||||||||| | |||| ||| |  ||||||    
T  32409985 atttttgagggacaaaatactattttggtattttagacaacttgtgagtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 32409886  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  32409885 gtcctgtc 32409878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 11382060 - 11382138
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| |||||||||  |||| |||||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  11382060 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtga 11382138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 24242660 - 24242738
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || |||||||||||||||||||||||||    
T  24242660 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtga 24242738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 15277070 - 15276941
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| || | ||| |||||||||||||||| || ||||||||||||||||||||||||| | |||| ||| |  ||||||    
T  15277070 atttttgagggacaaaatgctattttgttcttttagacaacttgtacgtgggaaaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 15276971  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  15276970 gtcctgtcccttgcctccagtttgtcctgt 15276941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 472
Target Start/End: Complemental strand, 11613924 - 11613818
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| | |||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  11613924 atttttgagggacaaaatgctattttggtattttatacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 11613825  T
Q  466 gtcctgt 472  Q
    |||||||    
T  11613824 gtcctgt 11613818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 7396258 - 7396152
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    ||||||||||||||||| | |||| | |||||| ||| ||||||||||||||| |||||||||||  ||||||| |||| | ||||  |||| |||||||    
T  7396258 atttttgatggacaaaacactatttttgtattttagataacttgtacgtgagacaaaaagttgtgtagtggtttagtgagggacaa-gatttctgttttt 7396160  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  7396159 gtcctgtc 7396152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 11212253 - 11212331
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||| |||||||| |||| ||| || |||||||||||||    
T  11212253 atttttgagggacaaaatgttattttggtattttagacaacttgcacgtgagacaaaaggttatgttgtggtttggtga 11212331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 375 - 495
Target Start/End: Complemental strand, 4494239 - 4494118
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataat-ttatgtttttgtcctgtc 473  Q
    ||||||||| |||||  ||||||| |||||||||||||||| || ||||||||||  ||||||||||||| | |||| ||| | |  |||||||||||||    
T  4494239 ggacaaaatgttatttcggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagttttttgtcctgtc 4494140  T
Q  474 atttgcctcaaatttatcctgt 495  Q
    | ||||||| | ||| ||||||    
T  4494139 acttgcctccagtttgtcctgt 4494118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 10485153 - 10485282
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| || ||||| |||||||||||||||| || ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  10485153 atttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaatatcagttttt 10485252  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  10485253 gtcctgtctcttgcctccagtttgtcctgt 10485282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 32132513 - 32132384
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| || ||||| |||||||||||||||| || ||||||||||| ||||| ||||||| | |||| ||| |  ||||||    
T  32132513 atttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggattggtgagggacaaaaatatgagttttt 32132414  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  32132413 gtcctgtcccttgcctccagtttgtcctgt 32132384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 34176826 - 34176942
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||| ||||||||||| || ||||||||||| |||| ||||||||   |||| ||| |  ||||||    
T  34176826 atttttgagggacaaaatgctattttggtattttagactacttgtacgtgggacaaaaagttgtgctgtgatttggtgagagacaaaaatatgagttttt 34176925  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||| ||||| |||||||    
T  34176926 gtcatgtcacttgcctc 34176942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 9902791 - 9902684
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||| |||| ||||| |||||||| |||||||||||||||| || ||||||||||| ||||||||  ||| | |||| ||| |  ||||||    
T  9902791 atttttgggggacgaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttaatgagggacaaaaatatcagttttt 9902692  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  9902691 gtcctgtc 9902684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 10959996 - 10960103
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| | |||||| |||||||||||||||| || ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  10959996 atttttgggggacaaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgttgagggacaaaaatatgagttttt 10960095  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  10960096 gtcctgtc 10960103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 386 - 444
Target Start/End: Complemental strand, 167036 - 166978
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||| |||||||| |||||||||||||||| || ||||||||||| |||||||||||||    
T  167036 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtga 166978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 386 - 444
Target Start/End: Original strand, 3379726 - 3379784
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||| ||||||||||||||||||||| |||||| ||||||||||| | |||||||||||    
T  3379726 tattttggtatttaagacaacttgtatgtgagacaaaaagttgtgctatggtttggtga 3379784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 366 - 440
Target Start/End: Original strand, 17867831 - 17867905
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttg 440  Q
    |||||||| |||||||||  |||| |||||||| |||||| ||||||||| || ||||||||||| |||||||||    
T  17867831 atttttgagggacaaaatgctattttggtattttagacaatttgtacgtgggacaaaaagttgtgctgtggtttg 17867905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 366 - 440
Target Start/End: Original strand, 17877614 - 17877688
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttg 440  Q
    |||||||| |||||||||  |||| |||||||| |||||| ||||||||| || ||||||||||| |||||||||    
T  17877614 atttttgagggacaaaatgctattttggtattttagacaatttgtacgtgggacaaaaagttgtgctgtggtttg 17877688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 393 - 495
Target Start/End: Original strand, 29054379 - 29054481
Alignment:
Q  393 gtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaatttatcc 492  Q
    |||||| ||||||||||||||||||| ||||||||||| |||||||||| || | |||| ||||   ||||||||| ||||  |||| || ||||| |||    
T  29054379 gtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggcgagggacaaaaattgtagtttttgtcatgtcccttgcttccaatttgtcc 29054478  T
Q  493 tgt 495  Q
    |||    
T  29054479 tgt 29054481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 3290668 - 3290782
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| ||||||||| |||||| ||  |||||||||| ||||||||||| | | |||| ||| |  ||||||    
T  3290668 atttttgagggacaaaatgctattttggtattttagacaacttatacgtggga--aaaagttgtgttgtggtttggtaagggacaaaaatatgagttttt 3290765  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  3290766 gtcctgtcccttgcctc 3290782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 442
Target Start/End: Complemental strand, 8178014 - 8177938
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggt 442  Q
    |||||||  |||| |||| ||||| |||||||| |||||||||| ||||| || ||||||||||| |||||||||||    
T  8178014 atttttgggggacgaaatgttattttggtattttagacaacttgaacgtgggacaaaaagttgtgttgtggtttggt 8177938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 473
Target Start/End: Complemental strand, 14925569 - 14925482
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||| |||||||| |||||||||||| ||| || ||||||||||  ||||||||||||| | |||| ||| |  ||||||||||||||    
T  14925569 tattttggtattttagacaacttgtaagtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcctgtc 14925482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 473
Target Start/End: Original strand, 17443278 - 17443365
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||| |||||||| |||||||||||||||| || ||||||||||  ||||||||||||| | | || ||| |  ||||||||||||||    
T  17443278 tattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggataaaaatatgagtttttgtcctgtc 17443365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 473
Target Start/End: Original strand, 18057535 - 18057622
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||| |||||||| |||||||||||||||| || ||||||||||  ||||||||||||| | |||| ||| |  ||||||||| ||||    
T  18057535 tattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcatgtc 18057622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 34684117 - 34684038
Alignment:
Q  366 atttttgatggacaaaatattattgtggtattta-agacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||  |||||||||  |||| ||||||||  ||||||||||||||||  | ||||||||||| |||||||||||||    
T  34684117 atttttggaggacaaaatgctattttggtatttttagacaacttgtacgtggaacaaaaagttgtgttgtggtttggtga 34684038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 482
Target Start/End: Complemental strand, 18597257 - 18597175
Alignment:
Q  400 agacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    ||||||||| |||||| || ||||||||||| ||||||||||||| | |||| |||||  | ||||||| ||||  |||||||    
T  18597257 agacaacttatacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagattttgtcatgtcccttgcctc 18597175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 445
Target Start/End: Complemental strand, 29203035 - 29202981
Alignment:
Q  391 tggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaa 445  Q
    |||||||| | ||||||||||| ||||||||||||||||| ||||| || |||||    
T  29203035 tggtattttaaacaacttgtacttgagagaaaaagttgtgttgtggattagtgaa 29202981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 495
Target Start/End: Complemental strand, 11675467 - 11675378
Alignment:
Q  406 cttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaatttatcctgt 495  Q
    |||||||||| || ||||||||||| | |||||||||||   |||| ||| |  |||||||||||||| |||||||| | ||| ||||||    
T  11675467 cttgtacgtgggataaaaagttgtgttatggtttggtgagagacaaaaatatcagtttttgtcctgtcctttgcctccagtttgtcctgt 11675378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 32860061 - 32860122
Alignment:
Q  380 aaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttgg 441  Q
    |||| ||||| | |||||| ||| ||||||||||||||| |||| |||||| ||||||||||    
T  32860061 aaatgttatttttgtattttagaaaacttgtacgtgagacaaaaggttgtgctgtggtttgg 32860122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 4e-24; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 366 - 491
Target Start/End: Complemental strand, 9512427 - 9512302
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||||| |||| ||| |  ||||||    
T  9512427 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgagttttt 9512328  T
Q  466 gtcctgtcatttgcctcaaatttatc 491  Q
    ||||||| | ||||||| | ||||||    
T  9512327 gtcctgttacttgcctccagtttatc 9512302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 20802618 - 20802489
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||| | |||| ||| |  ||||||    
T  20802618 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 20802519  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  20802518 gtcctgtctcttgcctccagtttgtcctgt 20802489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 21580025 - 21580154
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||| ||  |||| |||||||| |||||| |||||||||||| ||||||||||||||||||||||||| | |||| ||| |  ||||||    
T  21580025 atttttgagggacaacatgctattttggtattttagacaatttgtacgtgagacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 21580124  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| ||||| ||||||    
T  21580125 gtcctgtcccttgcctccaatttgtcctgt 21580154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 2725219 - 2725091
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||| | |||| ||| |  ||||||    
T  2725219 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtg-gacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 2725121  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  2725120 gtcctgtcccttgcctccagtttgtcctgt 2725091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 491
Target Start/End: Original strand, 55593884 - 55594009
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | || | ||| |  ||||||    
T  55593884 atttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggataaaaagttgtgctgtggtttggtgagggactaaaatatgagttttt 55593983  T
Q  466 gtcctgtcatttgcctcaaatttatc 491  Q
    ||||||||  ||||||| | ||||||    
T  55593984 gtcctgtcccttgcctccagtttatc 55594009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 343 - 482
Target Start/End: Complemental strand, 50729653 - 50729513
Alignment:
Q  343 acaaatttttatgatgttgaataattt-ttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttgg 441  Q
    ||||||||||||||| || |||||||| |||  |||| ||||  |||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||    
T  50729653 acaaatttttatgatattaaataatttattgcgggacgaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttgg 50729554  T
Q  442 tgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    |||   |||| |||||  ||||||||| ||||  |||||||    
T  50729553 tgatagacaaaaatttcagtttttgtcatgtcccttgcctc 50729513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 43641098 - 43641205
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  43641098 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 43641197  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  43641198 gtcctgtc 43641205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 50728000 - 50727893
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  50728000 atttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagttttt 50727901  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  50727900 gtcctgtc 50727893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 50736014 - 50735907
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  50736014 atttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagttttt 50735915  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  50735914 gtcctgtc 50735907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 24210317 - 24210447
Alignment:
Q  366 atttttgatggacaaaa-tattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    |||||||| |||||||| |  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||||||| |  |||||    
T  24210317 atttttgagggacaaaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgctgtggtttggtgagggacaataatatgagtttt 24210416  T
Q  465 tgtcctgtcatttgcctcaaatttatcctgt 495  Q
    |||||||||  ||||||| | ||| ||||||    
T  24210417 tgtcctgtcccttgcctccagtttgtcctgt 24210447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 1231310 - 1231439
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| || ||||| |||||||||||||||| || ||||||||||| |||||||| |||| | |||| ||| |  ||||||    
T  1231310 atttttgagggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgtgctgtggttttgtgagggacaaaaatatgagttttt 1231409  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    |||| |||  ||||||| | ||||||||||    
T  1231410 gtccagtctcttgcctccagtttatcctgt 1231439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 33177119 - 33176990
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||| ||||| |||||||| ||||||||||| |||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  33177119 atttttgggggacaaaatgttattttggtattttagacaacttgtgcgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 33177020  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  33177019 gtcctgtcccttgcctccagtttgtcctgt 33176990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 33552929 - 33552800
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  33552929 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 33552830  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||| ||||  |||| || ||||| ||||||    
T  33552829 gtcttgtcccttgcatccaatttgtcctgt 33552800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 38486344 - 38486215
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| || ||||| ||||||||||||||| ||| ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  38486344 atttttgagggacaaaatgctattttgatattttagacaacttgtacgttagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 38486245  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||| ||||  ||||||| | ||||||||||    
T  38486244 gtcatgtcccttgcctccagtttatcctgt 38486215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 56154620 - 56154749
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  56154620 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 56154719  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    || |||||  ||||||| | ||| ||||||    
T  56154720 gttctgtcccttgcctccagtttttcctgt 56154749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 470
Target Start/End: Original strand, 23521879 - 23521983
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  23521879 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 23521978  T
Q  466 gtcct 470  Q
    |||||    
T  23521979 gtcct 23521983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 49152186 - 49152080
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||||||||||||| ||||| |||| |||| ||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  49152186 atttttgatggacaaaatgttattttggttttta-gacaacttgtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 49152088  T
Q  466 gtcctgtc 473  Q
    ||| ||||    
T  49152087 gtcgtgtc 49152080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 55065420 - 55065313
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| || ||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  55065420 atttttgaaggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 55065321  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  55065320 gtcctgtc 55065313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 495
Target Start/End: Complemental strand, 2630019 - 2629909
Alignment:
Q  385 ttattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaa 484  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||||||| |||| |||||| | |||| ||| |  ||||||||| |||| |||||||| |    
T  2630019 ttattttggtattttagacaacttgtacgtgagacaaaaagttgtgatttggtctggtgagggacaaaaatatgagtttttgtcatgtcctttgcctcta 2629920  T
Q  485 atttatcctgt 495  Q
     ||| ||||||    
T  2629919 gtttgtcctgt 2629909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 473
Target Start/End: Original strand, 3649644 - 3649742
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||| |||| ||||| |||| ||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| |||||  ||||||||||||||    
T  3649644 ggacgaaatgttattttggtgttttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaattttagtttttgtcctgtc 3649742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 363 - 481
Target Start/End: Original strand, 20694367 - 20694485
Alignment:
Q  363 ataatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtt 462  Q
    ||||||||||  |||||||||  |||| |||||||| |||||||||||||||  || ||||||||| | ||||||||||||| | |||| ||| |  |||    
T  20694367 ataatttttgggggacaaaatgctattttggtattttagacaacttgtacgttggacaaaaagttgcgttgtggtttggtgagggacaaaaatatgagtt 20694466  T
Q  463 tttgtcctgtcatttgcct 481  Q
    ||||||||||| |||||||    
T  20694467 tttgtcctgtcctttgcct 20694485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 24002337 - 24002467
Alignment:
Q  366 atttttgatggacaaaa-tattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    |||||||| |||||||| |  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  |||||    
T  24002337 atttttgagggacaaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 24002436  T
Q  465 tgtcctgtcatttgcctcaaatttatcctgt 495  Q
    |||||||||  ||||||| | ||| ||||||    
T  24002437 tgtcctgtcccttgcctccagtttgtcctgt 24002467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 377 - 495
Target Start/End: Original strand, 38812530 - 38812648
Alignment:
Q  377 acaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatt 476  Q
    |||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||||||||||  |    
T  38812530 acaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtccct 38812629  T
Q  477 tgcctcaaatttatcctgt 495  Q
    |||||| | ||| ||||||    
T  38812630 tgcctccagtttgtcctgt 38812648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 386 - 495
Target Start/End: Complemental strand, 44324409 - 44324300
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaa 485  Q
    |||| |||||||||| |||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  |||||||||| ||| |||||||| |     
T  44324409 tattttggtatttaaaacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatcagtttttgtcccgtcttttgcctctag 44324310  T
Q  486 tttatcctgt 495  Q
    ||| ||||||    
T  44324309 tttgtcctgt 44324300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 46680597 - 46680468
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||| | |||||||||  |||| |||||||| |||||| |||||||||||| ||||||||||| ||||||||||| | | |||| ||| |  ||||||    
T  46680597 attttttagggacaaaatgctattatggtattttagacaatttgtacgtgagacaaaaagttgtgctgtggtttggtaagggacaaaaatatgagttttt 46680498  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  46680497 gtcctgtcccttgcctccagtttgtcctgt 46680468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 52319322 - 52319451
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| ||  |||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  |||||     
T  52319322 atttttgagggacaaaatgttattttgacattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttc 52319421  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  52319422 gtcctgtcccttgcctccagtttgtcctgt 52319451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 54542989 - 54543117
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| ||  |||||||||| | ||||||||||| | |||| ||| |  ||||||    
T  54542989 atttttgagggacaaaatgatattttggtattttagacaacttgtacgtggga-caaaagttgtgctatggtttggtgagggacaaaaatatgagttttt 54543087  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| ||||| ||||||    
T  54543088 gtcctgtcccttgcctccaatttgtcctgt 54543117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 36885931 - 36886047
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  ||||  ||||||| |||||| ||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  36885931 atttttgagggacaaaatgctatttaggtattttagacaatttgtacgtgggataaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 36886030  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  36886031 gtcctgtcccttgcctc 36886047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 12600885 - 12600992
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||| | |||||||||  |||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  12600885 attttttagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagttttt 12600984  T
Q  466 gtcctgtc 473  Q
    ||| ||||    
T  12600985 gtcttgtc 12600992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 29785624 - 29785517
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || |||||| |||| ||||||||||||| | |||| ||| |  ||||||    
T  29785624 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagctgtgttgtggtttggtgagggacaaaaatatgagttttt 29785525  T
Q  466 gtcctgtc 473  Q
    || |||||    
T  29785524 gttctgtc 29785517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 365 - 444
Target Start/End: Complemental strand, 36743776 - 36743697
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    ||||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||| |||||||||    
T  36743776 aatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtagtttggtga 36743697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 342 - 473
Target Start/End: Original strand, 52673786 - 52673917
Alignment:
Q  342 gacaaatttttatgatgttgaataatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttgg 441  Q
    |||||| ||||||| | |||||||||||||| |||||||||  ||||| | |||||| ||| ||||  ||||||||| ||||| ||||| || ||||| |    
T  52673786 gacaaacttttatggtattgaataatttttggtggacaaaaatttatttttgtattttagataactcatacgtgagacaaaaaattgtgttgaggtttag 52673885  T
Q  442 tgaagaacaataatttatgtttttgtcctgtc 473  Q
    ||| | |||| ||||| |||||||||| ||||    
T  52673886 tgagggacaaaaatttctgtttttgtcatgtc 52673917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 366 - 500
Target Start/End: Complemental strand, 53200731 - 53200596
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaa-gttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    |||||||| |||| ||||| |||| || | ||| |||||||||||||||| || ||||| |||||| ||||||||||||| | |||| |||||  |||||    
T  53200731 atttttgagggacgaaatactattttgatgttttagacaacttgtacgtgggacaaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttt 53200632  T
Q  465 tgtcctgtcatttgcctcaaatttatcctgtctctg 500  Q
    |||| |||   ||||||| | |||||||||||||||    
T  53200631 tgtcatgttccttgcctccagtttatcctgtctctg 53200596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 52949719 - 52949848
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| || ||||| |||||||||||||||| || ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  52949719 atttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagttttt 52949818  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  52949819 gtcctgtctcttgcctccagtttgtcctgt 52949848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 375 - 495
Target Start/End: Original strand, 21202747 - 21202867
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtca 474  Q
    |||||||||  |||| || ||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| | | |  ||||||||||||||     
T  21202747 ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaattatgagtttttgtcctgtct 21202846  T
Q  475 tttgcctcaaatttatcctgt 495  Q
     ||||||| | ||| ||||||    
T  21202847 cttgcctccagtttgtcctgt 21202867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 25978664 - 25978592
Alignment:
Q  400 agacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgt 472  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||| | |||| |||||  |||||||||||||    
T  25978664 agacaacttgtaagtgagacaaaaagttgtgatatggtttggtgagggacaaaaatttcagtttttgtcctgt 25978592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 473
Target Start/End: Original strand, 32181282 - 32181369
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||| |||||||| |||||||||||||||| || ||||||||||  ||||||||||||| | |||| ||| |  ||||||||||||||    
T  32181282 tattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcctgtc 32181369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 36497216 - 36497323
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||| |||  |||| || ||||| |||||||||||| ||  || ||||||||||||||||||||||||| | |||| ||| |  ||||||    
T  36497216 atttttgagggacagaatgctattttgatattttagacaacttgtatgttggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 36497315  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  36497316 gtcctgtc 36497323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 366 - 500
Target Start/End: Original strand, 34929914 - 34930048
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| || ||||| ||||||||||||  || |  ||||||||||| ||||||||||||| |||||| ||| |  ||||||    
T  34929914 atttttgggggacaaaatgctattttgatattttagacaacttgtatatggggcaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagttttt 34930013  T
Q  466 gtcctgtcatttgcctcaaatttatcctgtctctg 500  Q
    ||||||||  ||||||| | ||||| |||| ||||    
T  34930014 gtcctgtcccttgcctccagtttattctgtatctg 34930048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 482
Target Start/End: Complemental strand, 20518110 - 20517993
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    ||||||||| |||||||||  |||| |||||||| |||||||||||||||| || || ||||| || |||| |||||||| | |||| ||| |   ||||    
T  20518110 aatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaagaagttatgctgtgatttggtgagggacaaaaatatgactttt 20518011  T
Q  465 tgtcctgtcatttgcctc 482  Q
    |||||||||  |||||||    
T  20518010 tgtcctgtctcttgcctc 20517993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 457
Target Start/End: Complemental strand, 22318461 - 22318380
Alignment:
Q  376 gacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataattt 457  Q
    |||||||| ||||| |||| ||| ||||||||| ||||| ||| ||||||||||| ||||||||||||| | |||| |||||    
T  22318461 gacaaaatgttattttggtgttttagacaacttctacgtaagacaaaaagttgtgttgtggtttggtgagggacaaaaattt 22318380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 44649251 - 44649122
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| || ||||| ||||||||||||| || || ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  44649251 atttttgggggacaaaatgctattttgatattttagacaacttgtacatgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagttttt 44649152  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  44649151 gtcctgtctcttgcctccagtttgtcctgt 44649122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 488
Target Start/End: Original strand, 6776611 - 6776699
Alignment:
Q  400 agacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaattt 488  Q
    ||||||||| |||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||||||||||  ||||||| |||||    
T  6776611 agacaacttttacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaattt 6776699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 37865752 - 37865868
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||| ||| |||||||||  |||| |||||||| ||||||||||||| || || ||||||||||| |||| |||||||| | |||| ||| |  ||||||    
T  37865752 atttctgagggacaaaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgttgtgatttggtgagggacaaaaatatgagttttt 37865851  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||| ||||  |||||||    
T  37865852 gtcatgtctcttgcctc 37865868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 473
Target Start/End: Original strand, 43739459 - 43739567
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    |||||||  |||| ||||| ||||| |  ||||| |||||||||||| ||| || |||| |||||| ||||||||||||| | ||||||||||  |||||    
T  43739459 aattttttgtggataaaatgttattttaatattttagacaacttgtatgtgggacaaaatgttgtgttgtggtttggtgagggacaataatttcagtttt 43739558  T
Q  465 tgtcctgtc 473  Q
    |||| ||||    
T  43739559 tgtcatgtc 43739567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 457
Target Start/End: Complemental strand, 45577780 - 45577688
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataattt 457  Q
    |||||||  |||||||||| | ||| |||||||| |||||||||| ||||| || ||||||||||| |||||||| | || |||||| |||||    
T  45577780 aattttttgtggacaaaatgtcattttggtattttagacaacttgcacgtgggacaaaaagttgtgttgtggtttagcgaggaacaagaattt 45577688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 366 - 437
Target Start/End: Original strand, 29616169 - 29616240
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggt 437  Q
    |||||| | ||||||||| ||||| |||||||| |||||| ||||||||| || ||||||||||| ||||||    
T  29616169 atttttaagggacaaaatgttattttggtattttagacaatttgtacgtgggacaaaaagttgtgctgtggt 29616240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 473
Target Start/End: Original strand, 41711866 - 41711953
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||||  ||||||||||||| | |||| ||| |  || |||||||||||    
T  41711866 tattttggtattttagacaacctgtacgtgagacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtctttgtcctgtc 41711953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 4325790 - 4325868
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||  |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| || ||||| ||||    
T  4325790 atttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgcggttttgtga 4325868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 472
Target Start/End: Original strand, 23327930 - 23328024
Alignment:
Q  379 aaaatattattgtggtatttaagacaacttgtacgtgaga-gaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgt 472  Q
    ||||| ||||| |||||||| |||||||||||||||| ||  ||||||||||| ||||||||| ||| | |||| ||| |  |||||||||||||    
T  23327930 aaaatgttattttggtattttagacaacttgtacgtgggacaaaaaagttgtgttgtggtttgctgagggacaaaaatatgagtttttgtcctgt 23328024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 444
Target Start/End: Original strand, 28115271 - 28115329
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||| |||||||| |||||||||||| ||| || ||||||||||| |||||||||||||    
T  28115271 tattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtga 28115329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 440
Target Start/End: Complemental strand, 47642578 - 47642504
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttg 440  Q
    |||||||  |||||||||  |||| || ||||| |||||||||||||||| || ||||||||||| |||||||||    
T  47642578 atttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 47642504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 50178580 - 50178450
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaa-gttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    |||||||  |||||||||  |||| || ||||| |||||||||||||||| || ||||| |||||| ||||||||| ||| | |||| ||| |  |||||    
T  50178580 atttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagtttt 50178481  T
Q  465 tgtcctgtcatttgcctcaaatttatcctgt 495  Q
    |||||||||  ||||||| | ||| ||||||    
T  50178480 tgtcctgtctcttgcctccagtttgtcctgt 50178450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 366 - 491
Target Start/End: Complemental strand, 37695628 - 37695503
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||| |||| ||||| || ||||| ||||||| |||||||| || ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  37695628 atttttgggggacgaaatgttattttgatattttagacaacctgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaatatcagttttt 37695529  T
Q  466 gtcctgtcatttgcctcaaatttatc 491  Q
    ||| ||||  || |||| ||||||||    
T  37695528 gtcttgtctcttacctccaatttatc 37695503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 7001853 - 7001967
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    ||||||| |||||||| | ||||| ||||||||| |||||||| ||| |   | ||||||||||| ||||||||||||| | |||| ||||| |||||||    
T  7001853 atttttggtggacaaa-tgttattttggtattta-gacaacttatacatagaacaaaaagttgtgttgtggtttggtgagggacaaaaatttttgttttt 7001950  T
Q  466 gtcctgtcatttgcctc 482  Q
    || |||||  |||||||    
T  7001951 gttctgtctcttgcctc 7001967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 484
Target Start/End: Original strand, 9947966 - 9948046
Alignment:
Q  404 aacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaa 484  Q
    ||||||||||||||| |||||||||| ||||||||| |||| | | || |||||  ||||||||| ||||  |||||||||    
T  9947966 aacttgtacgtgagacaaaaagttgtaatgtggtttagtgagggataagaattttagtttttgtcatgtctcttgcctcaa 9948046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 470
Target Start/End: Original strand, 39078660 - 39078764
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||| ||||| |||| ||| |||||||| ||||||  || ||||| ||||| ||||||||||||| | |||| |||||  | ||||    
T  39078660 atttttgggggacaaaatgttattttggtgttttagacaactcgtacgtaggacaaaaatttgtgttgtggtttggtgagggacaaaaatttcaggtttt 39078759  T
Q  466 gtcct 470  Q
    |||||    
T  39078760 gtcct 39078764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 473
Target Start/End: Original strand, 2786963 - 2787070
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||| |||| ||||| |||  ||| ||| || ||||||||| || ||||| |||||||||||||| |||||| |||| ||| |  ||||||    
T  2786963 atttttgggggacgaaatgttattttggatttttagataatttgtacgtgggacaaaaatttgtgatgtggtttagtgaaggacaaaaatatgagttttt 2787062  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  2787063 gtcctgtc 2787070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 7555010 - 7554959
Alignment:
Q  400 agacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaa 451  Q
    ||||||||||||||||||| ||||||||||| | |||||| |||||| ||||    
T  7555010 agacaacttgtacgtgagacaaaaagttgtgttatggtttagtgaaggacaa 7554959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 473
Target Start/End: Original strand, 9807175 - 9807261
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||| |||||||| |||||||||||||||  || ||||||||||  |||||||||||| || |||| || ||  ||||||||||||||    
T  9807175 tattttggtattttagacaacttgtacgtaggacaaaaagttgtactgtggtttggtg-aggacaaaaagttgagtttttgtcctgtc 9807261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 50186554 - 50186605
Alignment:
Q  393 gtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||| |||||||||||| ||| || ||||||||||| |||||||||||||    
T  50186554 gtattttagacaacttgtatgtgggataaaaagttgtgttgtggtttggtga 50186605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 482
Target Start/End: Original strand, 26083372 - 26083454
Alignment:
Q  400 agacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    |||||||||||| ||| || |||||||| || ||||||||||||| | |||| |||||  ||||||||| ||||  |||||||    
T  26083372 agacaacttgtaagtgggacaaaaagttatgctgtggtttggtgagggacaaaaatttcagtttttgtcatgtcccttgcctc 26083454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 436
Target Start/End: Original strand, 40792416 - 40792486
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtgg 436  Q
    |||||||||||||||||   |||| | |||||| ||| ||||||||| ||| | |||||||||||||||||    
T  40792416 atttttgatggacaaaaagctatttttgtattttagataacttgtacatgaaacaaaaagttgtgatgtgg 40792486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 16320545 - 16320634
Alignment:
Q  393 gtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    |||||| || |||| |||||||| || ||||||||||| ||||||||||||| | |||| ||| |  |||||| |||||||  |||||||    
T  16320545 gtattttaggcaacctgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttatcctgtcccttgcctc 16320634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 484
Target Start/End: Original strand, 42772832 - 42772905
Alignment:
Q  411 acgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaa 484  Q
    ||||| || ||||||||||| ||||||||||||||| |||| ||| |  ||||||||| ||||  |||||||||    
T  42772832 acgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaatatgagtttttgtcttgtctcttgcctcaa 42772905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 424
Target Start/End: Original strand, 14296606 - 14296654
Alignment:
Q  376 gacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaa 424  Q
    |||||||| ||||| |||||||| |||||||||||||||| || |||||    
T  14296606 gacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaa 14296654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 424
Target Start/End: Original strand, 14314854 - 14314902
Alignment:
Q  376 gacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaa 424  Q
    |||||||| ||||| |||||||| |||||||||||||||| || |||||    
T  14314854 gacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaa 14314902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 41720766 - 41720830
Alignment:
Q  307 gacataacagcaaaacacaaagtagaacaacataagacaaatttttatgatgttgaataattttt 371  Q
    |||| |||| || ||||||||||||||||||| | |||||| ||| ||||| ||| |||||||||    
T  41720766 gacagaacaacataacacaaagtagaacaacacatgacaaactttaatgatattgtataattttt 41720830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 4e-24; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 365 - 482
Target Start/End: Complemental strand, 21221449 - 21221332
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttt 464  Q
    ||||||||| |||||||||  |||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| | |||| ||| |  |||||    
T  21221449 aatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 21221350  T
Q  465 tgtcctgtcatttgcctc 482  Q
    |||||||||  |||||||    
T  21221349 tgtcctgtcccttgcctc 21221332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 29584872 - 29585001
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  29584872 atttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 29584971  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||| ||||||| | ||| ||||||    
T  29584972 gtcctgtcacttgcctccagtttgtcctgt 29585001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 1344795 - 1344666
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| | |||| ||| |  |||| |    
T  1344795 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttct 1344696  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  1344695 gtcctgtcccttgcctccagtttgtcctgt 1344666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 491
Target Start/End: Original strand, 29646063 - 29646188
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| |||||||| | |||||||||||||| || ||||||||||||||||||||||||| | |||| ||| |||||||||    
T  29646063 atttttgggggacaaaatgctattttggtattttaaacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatatgttttt 29646162  T
Q  466 gtcctgtcatttgcctcaaatttatc 491  Q
    ||||| ||  ||||||| | ||||||    
T  29646163 gtcctatcccttgcctccagtttatc 29646188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 40094500 - 40094616
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||| |||||||||| | ||||||||||||||||||||||||| | |||| ||| |  ||||||    
T  40094500 atttttgagggacaaaatgctattttggtattttagacaatttgtacgtgaaacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 40094599  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  40094600 gtcctgtcccttgcctc 40094616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 42636491 - 42636375
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  42636491 atttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 42636392  T
Q  466 gtcctgtcatttgcctc 482  Q
    || |||||  |||||||    
T  42636391 gttctgtcccttgcctc 42636375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 20609736 - 20609629
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  20609736 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 20609637  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  20609636 gtcctgtc 20609629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 28675787 - 28675916
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  28675787 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 28675886  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||| ||  ||||||| | ||| ||||||    
T  28675887 gtcctatcccttgcctccagtttgtcctgt 28675916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 39052926 - 39052797
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  ||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||| |||||||||||||   |||| ||| |  ||||||    
T  39052926 atttttgggggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagttttt 39052827  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  39052826 gtcctgtccattgcctccagtttgtcctgt 39052797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 47958520 - 47958391
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||| ||||||||| | |||| ||| |  ||||||    
T  47958520 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtagtttggtgagggacaaaaatatgagttttt 47958421  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  47958420 gtcctgtcccttgcctccagtttttcctgt 47958391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 49748999 - 49748870
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||| |||| ||||| |||||||||| |||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  49748999 atttttgggggacgaaatgttattttggtatttaaaacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagttttt 49748900  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||| |||| |||||||| | ||| ||||||    
T  49748899 gtcatgtcctttgcctccagtttgtcctgt 49748870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 51259868 - 51259739
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||| | ||||||||| ||||| |||||||| |||||||||||||||| || |||||||||||  |||||||||||| | |||| ||| |  ||||||    
T  51259868 atttttaagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaaaatatgagttttt 51259769  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  51259768 gtcctgtcccttgcctccagtttgtcctgt 51259739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 53557883 - 53557754
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| ||||||||||||||||||| |||||||||||  |||||||||||| | |||| | | |  ||||||    
T  53557883 atttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgcagtggtttggtgagggacaaaactatgagttttt 53557784  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  53557783 gtcctgtccattgcctccagtttgtcctgt 53557754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 386 - 482
Target Start/End: Original strand, 19906779 - 19906875
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    |||| |||| ||| ||||||||||||||||||| ||||||||||| ||||||||||||| | |||| |||||  ||||||||||||||  |||||||    
T  19906779 tattttggtgttttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcctgtcccttgcctc 19906875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 51925296 - 51925180
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||| |||| ||||| ||||||| || |||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  51925296 atttttgggggacgaaatgttattttggtattaaaaacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagttttt 51925197  T
Q  466 gtcctgtcatttgcctc 482  Q
    |||||||| ||||||||    
T  51925196 gtcctgtcctttgcctc 51925180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 375 - 482
Target Start/End: Complemental strand, 3864754 - 3864647
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtca 474  Q
    |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| |||||||||| || | |||| ||| |  ||||||||||||||     
T  3864754 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatatgagtttttgtcctgtcc 3864655  T
Q  475 tttgcctc 482  Q
    ||||||||    
T  3864654 tttgcctc 3864647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 25860483 - 25860380
Alignment:
Q  392 ggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaatttatc 491  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | |||| ||| |  ||||||||| ||||  ||||||| | ||| ||    
T  25860483 ggtattttagacaacttgtacgtgagacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtc 25860384  T
Q  492 ctgt 495  Q
    ||||    
T  25860383 ctgt 25860380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 495
Target Start/End: Original strand, 50678809 - 50678924
Alignment:
Q  380 aaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgc 479  Q
    ||||| |||| |||||||| ||||||||||||||||||| ||||||||||| |||||||||||||   |||| ||| |  |||||||||||||  |||||    
T  50678809 aaatactattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagagacaaaaatatcagtttttgtcctgttctttgc 50678908  T
Q  480 ctcaaatttatcctgt 495  Q
    ||| | ||| ||||||    
T  50678909 ctccagtttgtcctgt 50678924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 12349259 - 12349130
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || | ||||||||| |||||||||||||   |||| ||| |  ||||||    
T  12349259 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacataaagttgtgctgtggtttggtgagagacaaaaatatgagttttt 12349160  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  12349159 gtcctgtcccttgcctccagtttgtcctgt 12349130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 386 - 495
Target Start/End: Original strand, 21373947 - 21374056
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaa 485  Q
    |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  | ||||||||||||  |||||||||     
T  21373947 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagattttgtcctgtcccttgcctcaag 21374046  T
Q  486 tttatcctgt 495  Q
    ||| ||||||    
T  21374047 tttgtcctgt 21374056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 25927415 - 25927286
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| | ||||||| ||||| |||||||| |||||||||||||||| || ||||||||||| |||| |||||| | | |||| ||| |  ||||||    
T  25927415 atttttgaggaacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtgttttggtaagggacaaaaatatgagttttt 25927316  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  25927315 gtcctgtcccttgcctccagtttgtcctgt 25927286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 33364866 - 33364737
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| || ||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |  ||| ||| |  ||||||    
T  33364866 atttttgggggacaaaatgctattttgatattttagacaacttgtacgtgagacaaaaagttgtgatgtggtttgctgaggggcaaaaatatcagttttt 33364767  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  33364766 gtcctgtctcttgcctccagtttgtcctgt 33364737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 34026664 - 34026780
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||| ||||| ||||||||||||| | |||| ||| |  ||||||    
T  34026664 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagttttt 34026763  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||| ||||  |||||||    
T  34026764 gtcatgtcccttgcctc 34026780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 365 - 444
Target Start/End: Complemental strand, 3695381 - 3695302
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    ||||||||  ||| |||||| |||| |||||||| |||||||||||||||| || |||| ||||||||||||||||||||    
T  3695381 aatttttgggggataaaatactattttggtattttagacaacttgtacgtgggacaaaaggttgtgatgtggtttggtga 3695302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 374 - 473
Target Start/End: Complemental strand, 34351448 - 34351349
Alignment:
Q  374 tggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||| ||||| ||||| || ||||| |||||||||||| ||| || ||||||||||| ||||||||| ||| | |||||||||| |||||||||| ||||    
T  34351448 tggataaaatgttattttgatattttagacaacttgtatgtgcgacaaaaagttgtgttgtggtttgatgagggacaataatttttgtttttgtcgtgtc 34351349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 4851544 - 4851466
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||| |||||||    
T  4851544 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtgggttggtga 4851466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 472
Target Start/End: Original strand, 20255042 - 20255147
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||| ||| || || |||||||| ||||||||||||| | |||| ||| |  ||||||    
T  20255042 atttttgagggacaaaatgttattttggtattttagacaacttgta-gtgggacaagaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 20255140  T
Q  466 gtcctgt 472  Q
    |||||||    
T  20255141 gtcctgt 20255147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 44116936 - 44117065
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| | |||||| |||||||||||||||| || |||||||||||  |||||||| ||| | |||| ||| |  ||||||    
T  44116936 atttttgagggacaaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgtgcagtggtttgatgagggacaaaaatatgagttttt 44117035  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||||||||  ||||||| | ||| ||||||    
T  44117036 gtcctgtcccttgcctccagtttgtcctgt 44117065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 369 - 473
Target Start/End: Complemental strand, 8648642 - 8648538
Alignment:
Q  369 tttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtc 468  Q
    |||| ||||||||| |||||| |||||||| |||||| |||||| || || ||||||||||||||| |||| || | |||||| |||||  |||||||||    
T  8648642 tttggtggacaaaagattattttggtattttagacaatttgtacttgtgacaaaaagttgtgatgtagtttagttaggaacaagaatttcagtttttgtc 8648543  T
Q  469 ctgtc 473  Q
     ||||    
T  8648542 atgtc 8648538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 24571278 - 24571394
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| | |||||| ||||||||||||| || || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  24571278 atttttgggggacaaaatcctatttttgtattttagacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 24571377  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  24571378 gtcctgtcccttgcctc 24571394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 38213351 - 38213467
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| |||||||| ||||   |||| ||| |  ||||||    
T  38213351 atttttgggggacaaaatggtattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttcgtgagtgacaaaaatatgagttttt 38213450  T
Q  466 gtcctgtcatttgcctc 482  Q
    ||||||||  |||||||    
T  38213451 gtcctgtctcttgcctc 38213467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 3964305 - 3964388
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcc 469  Q
    |||| |||||||| ||||||||||||| || || ||||||||||| ||||||||||||| | |||| |||||  ||||||||||    
T  3964305 tattttggtattttagacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcc 3964388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 469
Target Start/End: Complemental strand, 26282475 - 26282372
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| ||||||||| |||||| || ||||||||||| ||||||||| |||   |||| ||| || ||||||    
T  26282475 atttttgagggacaaaatgctattttggtattttagacaacttatacgtgggacaaaaagttgtgctgtggtttgatgagagacaaaaatataagttttt 26282376  T
Q  466 gtcc 469  Q
    ||||    
T  26282375 gtcc 26282372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 481
Target Start/End: Original strand, 44000258 - 44000373
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    ||||||| ||||||||| | |||| | |||||| ||| |||||||||||| || ||||| |||||||||||||| |||| | | || || || |||||||    
T  44000258 atttttggtggacaaaaaactatttttgtatttcagataacttgtacgtgggacaaaaaattgtgatgtggtttagtgagggaaaaaaaattctgttttt 44000357  T
Q  466 gtcctgtcatttgcct 481  Q
    ||| |||| |||||||    
T  44000358 gtcatgtcctttgcct 44000373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 2135067 - 2135196
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| ||||||| |  |||| |||||||| ||| || ||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  2135067 atttttgagggacaaagtgctattttggtattttagataatttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttt 2135166  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    || |||||  ||||||| | ||| ||||||    
T  2135167 gttctgtcccttgcctctagtttgtcctgt 2135196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 31883110 - 31882981
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||  |||||||||  |||| || ||||| |||||||||||||||| || ||||||||||| ||||||||| ||| | |||| ||| |  ||||||    
T  31883110 atttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagttttt 31883011  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||| ||||  ||||||| | ||| ||||||    
T  31883010 gtcgtgtctcttgcctccagtttgtcctgt 31882981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 495
Target Start/End: Original strand, 51296587 - 51296707
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtca 474  Q
    |||||||||  |||| | |||||| ||||||||||||| |  || ||||| ||||| ||||||||||||| | |||| ||| |  ||||||||||||||     
T  51296587 ggacaaaatgctatttttgtattttagacaacttgtacttaggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcc 51296686  T
Q  475 tttgcctcaaatttatcctgt 495  Q
    |||||||| | ||| ||||||    
T  51296687 tttgcctccagtttgtcctgt 51296707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 412
Target Start/End: Original strand, 32621865 - 32621912
Alignment:
Q  365 aatttttgatggacaaaatattattgtggtatttaagacaacttgtac 412  Q
    |||||||||||||||| |||||||| |||||||| |||||||||||||    
T  32621865 aatttttgatggacaacatattattttggtattttagacaacttgtac 32621912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 473
Target Start/End: Complemental strand, 54622864 - 54622777
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtc 473  Q
    |||| |||||||| |||||||||||||||| || ||||||||||| |||||||| ||||   |||| ||| |  ||||||||||||||    
T  54622864 tattttggtattttagacaacttgtacgtgggataaaaagttgtgttgtggtttcgtgagcgacaaaaatatgagtttttgtcctgtc 54622777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 430
Target Start/End: Complemental strand, 14155573 - 14155484
Alignment:
Q  343 acaaatttttatgatgttgaataatttttgatg--gacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtg 430  Q
    ||||| ||||||| | |||||||||||||  ||  ||||||| |||||| || ||||| ||||||||||||| ||||| |||||||||||    
T  14155573 acaaacttttatggtattgaataattttttttgtggacaaaagattattttgatattttagacaacttgtacttgagacaaaaagttgtg 14155484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 444
Target Start/End: Original strand, 23322151 - 23322216
Alignment:
Q  379 aaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    ||||||||||| || ||| | |||||||||||||| |||| ||||||||||| |||||||| ||||    
T  23322151 aaaatattattttgatatattagacaacttgtacgagagataaaaagttgtgttgtggtttagtga 23322216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 482
Target Start/End: Original strand, 24721502 - 24721598
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    |||| |||| ||| |||||||||||| ||| || ||||||||||| ||||||||| ||| | || | |||||  |||||||||||||| ||| ||||    
T  24721502 tattttggtgttttagacaacttgtatgtgggataaaaagttgtgttgtggtttgttgaggtaccaaaattttagtttttgtcctgtcctttacctc 24721598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 457
Target Start/End: Complemental strand, 3867737 - 3867646
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataattt 457  Q
    |||||||  |||||||||  |||| |||| ||| ||| |||||||||||  || ||||||||||| ||||||||||||| | |||| |||||    
T  3867737 atttttgggggacaaaatgctattttggtgttttagaaaacttgtacgtaggacaaaaagttgtgctgtggtttggtgagggacaaaaattt 3867646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 5442288 - 5442366
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| ||| |||||  |||| || ||||| ||||| |||||||||| || ||||||||||| |||| ||||||||    
T  5442288 atttttgagggataaaatgctattttgatattttagacagcttgtacgtgggacaaaaagttgtgctgtgatttggtga 5442366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 438
Target Start/End: Complemental strand, 39215547 - 39215485
Alignment:
Q  376 gacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtt 438  Q
    |||||||| ||||| |||||||| |||||||||||||||| || ||||| || |||| |||||    
T  39215547 gacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaaattatgatttggtt 39215485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 42547511 - 42547462
Alignment:
Q  323 acaaagtagaacaacataagacaaatttttatgatgttgaataatttttg 372  Q
    |||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  42547511 acaaggtagaacaacacatgacaaacttttatgatattgaataatttttg 42547462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 366 - 488
Target Start/End: Complemental strand, 18154 - 18032
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  18154 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 18055  T
Q  466 gtcctgtcatttgcctcaaattt 488  Q
    ||||||||  ||||||| |||||    
T  18054 gtcctgtcccttgcctccaattt 18032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 12636 - 12529
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||    
T  12636 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 12537  T
Q  466 gtcctgtc 473  Q
    ||||||||    
T  12536 gtcctgtc 12529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 375 - 495
Target Start/End: Complemental strand, 2429 - 2309
Alignment:
Q  375 ggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtca 474  Q
    |||||||| | |||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||||||||||     
T  2429 ggacaaaaaactattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcc 2330  T
Q  475 tttgcctcaaatttatcctgt 495  Q
     ||||||| ||||| ||||||    
T  2329 cttgcctccaatttgtcctgt 2309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 385 - 495
Target Start/End: Original strand, 23590 - 23700
Alignment:
Q  385 ttattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaa 484  Q
    ||||| |||||||| |||||||||||||||| || ||||||||||| ||||||||||||||| |||| ||| |  ||||||||| ||||  |||||||||    
T  23590 ttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgagtttttgtcatgtcccttgcctcaa 23689  T
Q  485 atttatcctgt 495  Q
     ||| ||||||    
T  23690 gtttgtcctgt 23700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 19903 - 19966
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgt 429  Q
    |||||||||| |||||| | |||| |||||||| | ||||||||||||||| | ||||||||||    
T  19903 atttttgatgaacaaaagactattttggtatttcaaacaacttgtacgtgaaacaaaaagttgt 19966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 101945 - 102074
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgttttt 465  Q
    |||||| | |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||| | |||| ||| |  ||||||    
T  101945 attttttagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 102044  T
Q  466 gtcctgtcatttgcctcaaatttatcctgt 495  Q
    ||| ||||  ||||||| || || ||||||    
T  102045 gtcatgtccgttgcctccaagttgtcctgt 102074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 19190 - 19112
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||| |||| ||||||||    
T  19190 atttttgaaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtgatttggtga 19112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 443
Target Start/End: Original strand, 15168 - 15245
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtg 443  Q
    |||||||  |||||||||| |||| | |||||| ||||||||||||||||||| ||||||||||| ||||||||||||    
T  15168 atttttgggggacaaaatactattttagtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtg 15245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 482
Target Start/End: Complemental strand, 1741 - 1627
Alignment:
Q  368 ttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgt 467  Q
    |||||| |||| ||||  |||| |||| ||| |||||||||||||||| || ||||||||||| ||||||||||||| | |||| |||||  ||||||||    
T  1741 ttttgagggacgaaatgctattttggttttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgt 1642  T
Q  468 cctgtcatttgcctc 482  Q
    | ||||  |||||||    
T  1641 cttgtcccttgcctc 1627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 373064 - 372986
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||||||| |||||||||  |||| |||||||| |||||||||||||||| || ||||||||||| | |||||||||||    
T  373064 atttttgagggacaaaatgatattttggtattttagacaacttgtacgtgggacaaaaagttgtgttatggtttggtga 372986  T

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Target: scaffold0098 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 366 - 440
Target Start/End: Original strand, 51435 - 51509
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttg 440  Q
    |||||||| |||||||||  |||| || ||||| |||||||||||||||| || ||||||||||| |||||||||    
T  51435 atttttgagggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 51509  T

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Target: scaffold0729 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 488
Target Start/End: Complemental strand, 4645 - 4557
Alignment:
Q  400 agacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctcaaattt 488  Q
    ||||||||| |||||| || ||||||||||| ||||||||||||| | |||| ||| |  ||||||||||||||  ||||||| |||||    
T  4645 agacaacttttacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaattt 4557  T

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Target: scaffold0360 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 13679 - 13615
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtg 430  Q
    ||||||||||||||||||| |||| |||||||  ||||||||||||| || || |||||||||||    
T  13679 atttttgatggacaaaatactattttggtattctagacaacttgtacatgtgacaaaaagttgtg 13615  T

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Target: scaffold0360; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 444
Target Start/End: Complemental strand, 15461 - 15403
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtga 444  Q
    |||| |||||||| ||||||||||||| || || ||||||||||| |||||||||||||    
T  15461 tattttggtattttagacaacttgtacatgggacaaaaagttgtgttgtggtttggtga 15403  T

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Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 482
Target Start/End: Complemental strand, 5526 - 5423
Alignment:
Q  380 aaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatg-tttttgtcctgtcatttg 478  Q
    |||| ||||| | |||||| || ||||||||| ||| || ||||||||||||||||||||||||| | |||| ||| | || |||||||||||||  |||    
T  5526 aaatgttatttttgtattttaggcaacttgtatgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgtgttttttgtcctgtcccttg 5427  T
Q  479 cctc 482  Q
    ||||    
T  5426 cctc 5423  T

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Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 457
Target Start/End: Complemental strand, 33642 - 33553
Alignment:
Q  368 ttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataattt 457  Q
    |||||||||||||||   |||| |||||||| | |||| ||||||||| || ||||||||||| ||||||||| ||| | |||| |||||    
T  33642 ttttgatggacaaaagcctattttggtattttatacaatttgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaagaattt 33553  T

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Target: scaffold0957 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 442
Target Start/End: Complemental strand, 2595 - 2520
Alignment:
Q  366 atttttgatggacaaaatattattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggt 442  Q
    |||||||  |||||||||  |||| |||||||| |||||||||||||||||||  || ||||||| |||||||||||    
T  2595 atttttgggggacaaaatgctattttggtattttagacaacttgtacgtgaga-caatagttgtgttgtggtttggt 2520  T

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Target: scaffold0280 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 470
Target Start/End: Complemental strand, 13767 - 13683
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcct 470  Q
    |||| |||| ||| |||||||||||| ||| || ||||||||||  ||||||||||||| | |||| |||||  |||||||||||    
T  13767 tattttggtgttttagacaacttgtaagtgggacaaaaagttgtactgtggtttggtgagggacaaaaatttcagtttttgtcct 13683  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 482
Target Start/End: Complemental strand, 43029 - 42934
Alignment:
Q  386 tattgtggtatttaagacaacttgtacgtgagagaaaaagttgtgatgtggtttggtgaagaacaataatttatgtttttgtcctgtcatttgcctc 482  Q
    |||| |||| ||| |||||| ||||||||| || ||||||||||| ||||||||||||| | |||  |||||  |||||||| |||||  |||||||    
T  43029 tattttggtgttttagacaa-ttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacacaaatttcagtttttgttctgtcccttgcctc 42934  T

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