View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0936_low_5 (Length: 492)

Name: NF0936_low_5
Description: NF0936
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0936_low_5
NF0936_low_5
[»] chr4 (99 HSPs)
chr4 (30-246)||(8065211-8065427)
chr4 (305-468)||(39979726-39979889)
chr4 (300-468)||(49812170-49812338)
chr4 (300-463)||(18849762-18849925)
chr4 (338-468)||(38976970-38977101)
chr4 (304-443)||(48740465-48740604)
chr4 (300-468)||(1825244-1825414)
chr4 (300-468)||(41710142-41710310)
chr4 (300-468)||(49306528-49306696)
chr4 (304-468)||(54729482-54729645)
chr4 (300-443)||(29644296-29644439)
chr4 (304-446)||(44020782-44020924)
chr4 (308-468)||(42024199-42024359)
chr4 (300-468)||(47787845-47788013)
chr4 (323-468)||(4360406-4360551)
chr4 (300-468)||(8294972-8295138)
chr4 (305-462)||(42544155-42544312)
chr4 (300-464)||(3685952-3686116)
chr4 (303-442)||(51527363-51527501)
chr4 (300-462)||(42185800-42185962)
chr4 (302-468)||(40881190-40881357)
chr4 (304-468)||(41203681-41203846)
chr4 (323-468)||(41436445-41436590)
chr4 (300-468)||(33047439-33047601)
chr4 (300-463)||(39976393-39976557)
chr4 (300-448)||(51572246-51572393)
chr4 (395-474)||(8065569-8065648)
chr4 (323-468)||(17237007-17237152)
chr4 (388-468)||(9093760-9093840)
chr4 (329-468)||(25149421-25149561)
chr4 (324-468)||(22872384-22872530)
chr4 (304-468)||(34020980-34021146)
chr4 (305-468)||(49448785-49448950)
chr4 (300-468)||(283475-283643)
chr4 (304-463)||(28974252-28974410)
chr4 (303-445)||(35998138-35998281)
chr4 (304-445)||(39052922-39053062)
chr4 (310-442)||(38319862-38319994)
chr4 (304-451)||(37309643-37309790)
chr4 (305-445)||(34790972-34791113)
chr4 (301-468)||(31862736-31862898)
chr4 (326-468)||(18509808-18509950)
chr4 (323-450)||(27977107-27977238)
chr4 (305-462)||(39258273-39258438)
chr4 (324-468)||(32559128-32559272)
chr4 (327-424)||(42132781-42132878)
chr4 (312-468)||(44633109-44633265)
chr4 (336-468)||(26799214-26799346)
chr4 (312-468)||(28279790-28279946)
chr4 (392-468)||(50328069-50328145)
chr4 (324-475)||(10099716-10099867)
chr4 (305-468)||(43335021-43335184)
chr4 (305-424)||(48400673-48400791)
chr4 (343-470)||(50714566-50714693)
chr4 (300-446)||(16493317-16493461)
chr4 (318-424)||(29550769-29550875)
chr4 (318-424)||(37315964-37316070)
chr4 (324-461)||(47846863-47847000)
chr4 (311-450)||(55360364-55360505)
chr4 (300-468)||(26185129-26185291)
chr4 (326-445)||(42051677-42051796)
chr4 (341-468)||(46958704-46958830)
chr4 (398-468)||(35909571-35909641)
chr4 (324-424)||(22020552-22020653)
chr4 (304-468)||(45289982-45290145)
chr4 (324-424)||(29136831-29136931)
chr4 (323-468)||(38160150-38160297)
chr4 (324-420)||(49401621-49401717)
chr4 (343-450)||(4357552-4357658)
chr4 (300-373)||(29656509-29656583)
chr4 (305-399)||(42670437-42670531)
chr4 (326-424)||(47277724-47277822)
chr4 (310-424)||(54217293-54217407)
chr4 (349-426)||(1796282-1796359)
chr4 (301-350)||(8065489-8065538)
chr4 (305-406)||(29815157-29815259)
chr4 (303-450)||(14009650-14009797)
chr4 (310-424)||(36047142-36047257)
chr4 (303-370)||(38861328-38861395)
chr4 (303-420)||(9052096-9052216)
chr4 (393-450)||(6506128-6506185)
chr4 (324-381)||(22496762-22496819)
chr4 (300-442)||(28330733-28330877)
chr4 (358-451)||(29990487-29990580)
chr4 (427-468)||(42367857-42367898)
chr4 (389-442)||(43421330-43421383)
chr4 (310-442)||(49218807-49218939)
chr4 (400-468)||(21240934-21241002)
chr4 (377-473)||(38614957-38615052)
chr4 (358-462)||(40293686-40293790)
chr4 (428-468)||(42670381-42670421)
chr4 (392-468)||(30568692-30568772)
chr4 (323-433)||(3503088-3503198)
chr4 (323-381)||(22129156-22129214)
chr4 (300-353)||(5291631-5291683)
chr4 (300-365)||(42738433-42738498)
chr4 (300-349)||(47386101-47386149)
chr4 (392-424)||(3505755-3505787)
chr4 (392-424)||(32949891-32949923)
[»] chr8 (79 HSPs)
chr8 (300-468)||(44790420-44790589)
chr8 (300-468)||(38252436-38252604)
chr8 (315-468)||(32967275-32967428)
chr8 (304-468)||(5391993-5392158)
chr8 (304-468)||(2349295-2349459)
chr8 (304-468)||(34133072-34133236)
chr8 (300-462)||(33190913-33191075)
chr8 (303-468)||(29615742-29615907)
chr8 (308-468)||(22324953-22325113)
chr8 (305-462)||(32241428-32241585)
chr8 (300-463)||(5962476-5962640)
chr8 (300-468)||(39171484-39171652)
chr8 (304-468)||(12653632-12653796)
chr8 (300-468)||(42412381-42412549)
chr8 (300-468)||(2195409-2195576)
chr8 (304-468)||(28802712-28802876)
chr8 (303-470)||(42558577-42558744)
chr8 (300-463)||(21587217-21587381)
chr8 (303-424)||(34287121-34287242)
chr8 (305-450)||(44615381-44615526)
chr8 (305-468)||(45425429-45425594)
chr8 (300-468)||(13084946-13085117)
chr8 (303-462)||(31132673-31132833)
chr8 (300-475)||(10728914-10729087)
chr8 (305-464)||(31410610-31410769)
chr8 (300-442)||(14689901-14690043)
chr8 (325-468)||(33746217-33746359)
chr8 (361-461)||(7042754-7042855)
chr8 (329-420)||(33925130-33925221)
chr8 (310-424)||(886490-886604)
chr8 (304-418)||(9014545-9014659)
chr8 (318-468)||(28791267-28791417)
chr8 (300-418)||(32231768-32231886)
chr8 (317-466)||(41726479-41726628)
chr8 (300-468)||(2119657-2119825)
chr8 (305-468)||(4274297-4274460)
chr8 (312-424)||(2796992-2797105)
chr8 (323-468)||(7258365-7258509)
chr8 (324-424)||(14748748-14748849)
chr8 (389-463)||(29730899-29730975)
chr8 (323-463)||(8618092-8618232)
chr8 (318-450)||(45197570-45197702)
chr8 (310-424)||(8418344-8418461)
chr8 (305-424)||(33826181-33826296)
chr8 (300-451)||(138974-139114)
chr8 (401-462)||(9014745-9014806)
chr8 (312-445)||(14117415-14117548)
chr8 (348-440)||(22490380-22490472)
chr8 (318-462)||(15559134-15559280)
chr8 (318-381)||(36012057-36012120)
chr8 (300-424)||(43844925-43845050)
chr8 (318-381)||(45421025-45421088)
chr8 (384-450)||(138715-138781)
chr8 (338-424)||(27868367-27868453)
chr8 (323-451)||(3384496-3384626)
chr8 (323-445)||(39416273-39416396)
chr8 (396-468)||(12957979-12958051)
chr8 (312-424)||(38201433-38201544)
chr8 (318-445)||(32678994-32679121)
chr8 (339-450)||(40077766-40077877)
chr8 (392-450)||(325132-325190)
chr8 (318-424)||(29638260-29638366)
chr8 (329-450)||(37219780-37219899)
chr8 (318-424)||(37459309-37459415)
chr8 (323-424)||(2875128-2875229)
chr8 (300-349)||(34133022-34133071)
chr8 (323-380)||(42797773-42797830)
chr8 (324-424)||(3442449-3442548)
chr8 (314-373)||(4480536-4480596)
chr8 (326-424)||(11637106-11637205)
chr8 (305-352)||(29730982-29731029)
chr8 (392-446)||(1230383-1230436)
chr8 (323-373)||(12958275-12958325)
chr8 (318-379)||(8566493-8566554)
chr8 (392-424)||(5878268-5878300)
chr8 (358-424)||(17005947-17006010)
chr8 (358-424)||(17571238-17571301)
chr8 (305-353)||(26570272-26570320)
chr8 (392-424)||(39998196-39998228)
[»] chr6 (31 HSPs)
chr6 (300-468)||(15081364-15081532)
chr6 (304-468)||(31265725-31265888)
chr6 (307-468)||(7301078-7301239)
chr6 (300-468)||(3604598-3604766)
chr6 (300-464)||(30063951-30064115)
chr6 (318-468)||(9755145-9755294)
chr6 (300-466)||(4238363-4238528)
chr6 (303-468)||(33109317-33109482)
chr6 (324-450)||(2657866-2657992)
chr6 (300-450)||(33921485-33921635)
chr6 (304-448)||(34915831-34915964)
chr6 (339-450)||(33017960-33018071)
chr6 (326-424)||(3166150-3166248)
chr6 (305-450)||(7739534-7739680)
chr6 (321-423)||(26356232-26356333)
chr6 (392-468)||(14312646-14312722)
chr6 (323-424)||(2310330-2310431)
chr6 (318-447)||(8232330-8232458)
chr6 (339-468)||(14306239-14306368)
chr6 (311-424)||(15321267-15321380)
chr6 (323-424)||(15371905-15372006)
chr6 (323-468)||(31723458-31723603)
chr6 (367-468)||(117087-117188)
chr6 (317-406)||(6787253-6787342)
chr6 (326-450)||(3874066-3874189)
chr6 (310-353)||(4552853-4552896)
chr6 (300-355)||(34703561-34703616)
chr6 (323-381)||(34803792-34803850)
chr6 (384-424)||(723599-723639)
chr6 (389-437)||(5568264-5568312)
chr6 (318-418)||(34441851-34441950)
[»] chr2 (82 HSPs)
chr2 (303-468)||(28108373-28108539)
chr2 (304-468)||(28925846-28926010)
chr2 (323-468)||(30757566-30757711)
chr2 (304-462)||(3100345-3100503)
chr2 (300-468)||(43077724-43077891)
chr2 (305-462)||(7649979-7650136)
chr2 (300-468)||(5211956-5212124)
chr2 (304-468)||(41436024-41436188)
chr2 (300-462)||(28572152-28572311)
chr2 (306-468)||(24775806-24775968)
chr2 (301-468)||(37247882-37248049)
chr2 (308-468)||(15859343-15859500)
chr2 (305-475)||(28526910-28527080)
chr2 (323-468)||(435076-435227)
chr2 (305-468)||(28301384-28301543)
chr2 (304-451)||(44534498-44534649)
chr2 (300-468)||(18181211-18181380)
chr2 (304-451)||(10818565-10818713)
chr2 (300-442)||(7213416-7213558)
chr2 (300-445)||(9724822-9724964)
chr2 (326-451)||(8031708-8031833)
chr2 (324-465)||(23684925-23685065)
chr2 (348-470)||(13375184-13375308)
chr2 (300-381)||(33751402-33751483)
chr2 (306-415)||(33880106-33880214)
chr2 (336-462)||(2881962-2882088)
chr2 (318-468)||(4794529-4794682)
chr2 (304-468)||(3123588-3123755)
chr2 (304-405)||(42881338-42881439)
chr2 (358-462)||(2756673-2756777)
chr2 (326-442)||(31348478-31348594)
chr2 (306-481)||(14136711-14136885)
chr2 (317-463)||(31546021-31546167)
chr2 (300-398)||(40964994-40965091)
chr2 (323-424)||(37529113-37529214)
chr2 (326-445)||(1908515-1908634)
chr2 (318-481)||(7931481-7931644)
chr2 (318-445)||(24356070-24356197)
chr2 (300-451)||(31592492-31592642)
chr2 (304-424)||(3199838-3199963)
chr2 (326-463)||(8550645-8550781)
chr2 (305-451)||(44194598-44194738)
chr2 (358-451)||(44424278-44424371)
chr2 (318-450)||(10069601-10069733)
chr2 (326-445)||(39095599-39095717)
chr2 (318-424)||(13222027-13222133)
chr2 (323-479)||(33602214-33602375)
chr2 (405-462)||(565135-565192)
chr2 (317-406)||(5425815-5425904)
chr2 (338-427)||(7648905-7648993)
chr2 (326-451)||(19515848-19515973)
chr2 (305-442)||(734036-734174)
chr2 (305-424)||(8385022-8385140)
chr2 (318-424)||(9472381-9472487)
chr2 (325-443)||(37028724-37028842)
chr2 (305-405)||(19009791-19009892)
chr2 (393-462)||(36103305-36103374)
chr2 (304-424)||(38872964-38873082)
chr2 (326-446)||(25604328-25604448)
chr2 (305-373)||(36103543-36103610)
chr2 (393-468)||(11726720-11726795)
chr2 (300-445)||(14384299-14384445)
chr2 (358-423)||(6685706-6685771)
chr2 (304-349)||(13375591-13375636)
chr2 (300-373)||(14284367-14284439)
chr2 (345-422)||(16864978-16865055)
chr2 (301-424)||(24451725-24451847)
chr2 (326-423)||(44284362-44284459)
chr2 (323-422)||(2427323-2427423)
chr2 (340-408)||(44736700-44736768)
chr2 (393-444)||(883172-883223)
chr2 (384-443)||(12524318-12524377)
chr2 (395-450)||(33755293-33755348)
chr2 (393-468)||(36396456-36396531)
chr2 (326-405)||(43182241-43182320)
chr2 (323-381)||(5007627-5007685)
chr2 (358-424)||(26273758-26273824)
chr2 (358-424)||(43427128-43427194)
chr2 (385-447)||(45523961-45524023)
chr2 (392-425)||(13538310-13538343)
chr2 (348-412)||(6075487-6075551)
chr2 (392-468)||(43950446-43950522)
[»] chr3 (75 HSPs)
chr3 (304-468)||(41031517-41031684)
chr3 (300-466)||(54493850-54494015)
chr3 (300-468)||(33994598-33994766)
chr3 (345-468)||(32827302-32827425)
chr3 (303-468)||(5245356-5245521)
chr3 (306-462)||(21296507-21296663)
chr3 (300-464)||(32023103-32023267)
chr3 (305-468)||(26134701-26134864)
chr3 (300-468)||(54122222-54122389)
chr3 (303-468)||(39866551-39866716)
chr3 (300-468)||(9017740-9017910)
chr3 (349-468)||(45392080-45392199)
chr3 (304-462)||(15280550-15280707)
chr3 (300-412)||(39365071-39365183)
chr3 (384-474)||(48744284-48744374)
chr3 (305-468)||(54845514-54845679)
chr3 (305-445)||(1334802-1334936)
chr3 (300-468)||(26832012-26832180)
chr3 (300-451)||(30261516-30261668)
chr3 (312-451)||(39329765-39329904)
chr3 (300-450)||(54458325-54458476)
chr3 (305-445)||(51164898-51165038)
chr3 (305-445)||(38600827-38600966)
chr3 (306-426)||(49003217-49003337)
chr3 (384-468)||(54782988-54783072)
chr3 (304-468)||(46785977-46786143)
chr3 (300-450)||(21585426-21585576)
chr3 (300-468)||(2868515-2868683)
chr3 (356-468)||(43639514-43639626)
chr3 (300-440)||(46194233-46194372)
chr3 (324-443)||(37041896-37042018)
chr3 (300-451)||(42547121-42547272)
chr3 (323-446)||(44219053-44219176)
chr3 (305-447)||(44234037-44234178)
chr3 (344-448)||(9218130-9218234)
chr3 (326-450)||(48409551-48409675)
chr3 (365-468)||(14756112-14756215)
chr3 (305-420)||(54021504-54021618)
chr3 (318-468)||(53050985-53051135)
chr3 (300-468)||(36097653-36097822)
chr3 (358-450)||(52325176-52325268)
chr3 (300-373)||(48744166-48744239)
chr3 (333-424)||(1923064-1923155)
chr3 (300-442)||(12744754-12744897)
chr3 (299-354)||(43640677-43640732)
chr3 (304-468)||(1772104-1772274)
chr3 (392-462)||(11251131-11251201)
chr3 (392-462)||(53876440-53876510)
chr3 (323-462)||(8706112-8706249)
chr3 (323-462)||(9057999-9058136)
chr3 (304-373)||(24619005-24619074)
chr3 (392-468)||(10855027-10855103)
chr3 (310-450)||(55415455-55415595)
chr3 (305-468)||(17776992-17777155)
chr3 (305-468)||(19078293-19078456)
chr3 (392-451)||(22202404-22202463)
chr3 (312-446)||(53754084-53754219)
chr3 (308-447)||(26142855-26142987)
chr3 (339-424)||(47496149-47496234)
chr3 (359-451)||(11529126-11529218)
chr3 (305-424)||(3862214-3862332)
chr3 (305-424)||(27668369-27668487)
chr3 (317-462)||(46627929-46628071)
chr3 (312-411)||(50736054-50736153)
chr3 (312-411)||(50776702-50776801)
chr3 (324-405)||(39825790-39825871)
chr3 (351-463)||(15081995-15082106)
chr3 (339-450)||(29858881-29858993)
chr3 (300-355)||(3547701-3547756)
chr3 (310-421)||(34081100-34081211)
chr3 (310-353)||(36790986-36791029)
chr3 (303-373)||(7885653-7885722)
chr3 (400-450)||(39144686-39144736)
chr3 (300-370)||(51636985-51637055)
chr3 (392-424)||(41287295-41287327)
[»] chr1 (101 HSPs)
chr1 (300-480)||(28277025-28277205)
chr1 (301-468)||(19532918-19533085)
chr1 (304-468)||(36467194-36467358)
chr1 (304-468)||(49494162-49494325)
chr1 (306-468)||(48242589-48242751)
chr1 (300-468)||(8327658-8327826)
chr1 (303-468)||(28839284-28839448)
chr1 (300-468)||(45889247-45889415)
chr1 (305-468)||(52830413-52830575)
chr1 (300-468)||(51848691-51848863)
chr1 (352-468)||(26755969-26756085)
chr1 (344-468)||(50267437-50267561)
chr1 (300-468)||(7785271-7785440)
chr1 (300-468)||(3555554-3555722)
chr1 (304-468)||(46536285-46536449)
chr1 (300-462)||(51749188-51749350)
chr1 (300-468)||(8773179-8773351)
chr1 (300-468)||(27698753-27698913)
chr1 (304-450)||(4466171-4466317)
chr1 (304-450)||(38664346-38664492)
chr1 (304-468)||(17342773-17342937)
chr1 (304-468)||(17724713-17724877)
chr1 (304-462)||(36784259-36784417)
chr1 (324-462)||(52432277-52432415)
chr1 (300-468)||(5040574-5040742)
chr1 (304-468)||(5442286-5442449)
chr1 (304-468)||(43895792-43895956)
chr1 (304-468)||(46495963-46496127)
chr1 (318-468)||(27831804-27831955)
chr1 (300-451)||(29225694-29225845)
chr1 (300-424)||(2219491-2219614)
chr1 (300-468)||(11425868-11426036)
chr1 (303-462)||(28908037-28908190)
chr1 (305-468)||(16040023-16040186)
chr1 (305-468)||(34877089-34877251)
chr1 (326-445)||(36232811-36232930)
chr1 (312-468)||(12267630-12267786)
chr1 (330-450)||(29225425-29225544)
chr1 (305-468)||(3718848-3719010)
chr1 (305-468)||(7787623-7787771)
chr1 (304-447)||(46880364-46880503)
chr1 (370-453)||(5563025-5563107)
chr1 (305-412)||(11324194-11324301)
chr1 (305-412)||(11482215-11482322)
chr1 (358-468)||(25842598-25842707)
chr1 (323-424)||(2886135-2886236)
chr1 (358-462)||(13500734-13500838)
chr1 (300-424)||(24131443-24131567)
chr1 (305-468)||(10370184-10370349)
chr1 (318-442)||(29756167-29756293)
chr1 (393-468)||(30749965-30750040)
chr1 (393-468)||(30771416-30771491)
chr1 (303-373)||(6784947-6785017)
chr1 (304-442)||(26583673-26583811)
chr1 (318-451)||(30903243-30903376)
chr1 (300-373)||(32347885-32347958)
chr1 (391-468)||(32348250-32348327)
chr1 (310-450)||(18186223-18186362)
chr1 (386-462)||(27391374-27391450)
chr1 (318-468)||(2571323-2571471)
chr1 (359-468)||(34813917-34814026)
chr1 (324-424)||(37925289-37925389)
chr1 (300-447)||(705369-705516)
chr1 (326-381)||(30749722-30749777)
chr1 (326-381)||(30771173-30771228)
chr1 (357-468)||(32587763-32587874)
chr1 (391-450)||(37281014-37281073)
chr1 (305-403)||(49944737-49944833)
chr1 (331-424)||(10587624-10587717)
chr1 (393-462)||(21304418-21304487)
chr1 (323-447)||(25869645-25869771)
chr1 (323-424)||(31798382-31798483)
chr1 (323-424)||(33149238-33149338)
chr1 (300-420)||(35622826-35622946)
chr1 (323-442)||(37541138-37541261)
chr1 (393-450)||(42926168-42926225)
chr1 (400-468)||(6787288-6787356)
chr1 (305-437)||(51049455-51049586)
chr1 (359-434)||(948620-948695)
chr1 (318-381)||(16451590-16451653)
chr1 (318-381)||(16460743-16460806)
chr1 (338-417)||(37525031-37525109)
chr1 (326-416)||(20988533-20988623)
chr1 (323-445)||(27209989-27210110)
chr1 (300-373)||(26760098-26760171)
chr1 (300-373)||(26924363-26924436)
chr1 (407-468)||(49944980-49945041)
chr1 (326-445)||(52382408-52382528)
chr1 (327-373)||(27143290-27143336)
chr1 (392-450)||(29678859-29678917)
chr1 (303-373)||(35705259-35705329)
chr1 (391-445)||(37495861-37495915)
chr1 (326-468)||(40019727-40019868)
chr1 (326-424)||(40061776-40061874)
chr1 (325-402)||(42309397-42309475)
chr1 (318-424)||(50333894-50334000)
chr1 (305-354)||(1859453-1859502)
chr1 (305-381)||(52146741-52146822)
chr1 (358-450)||(14352565-14352657)
chr1 (318-424)||(26040599-26040709)
chr1 (400-468)||(50926788-50926856)
[»] chr7 (73 HSPs)
chr7 (305-468)||(30462962-30463125)
chr7 (305-468)||(31581441-31581604)
chr7 (300-468)||(34963806-34963977)
chr7 (300-468)||(2846674-2846842)
chr7 (305-468)||(47453950-47454113)
chr7 (300-468)||(5724706-5724873)
chr7 (300-468)||(11616502-11616671)
chr7 (303-468)||(36117606-36117771)
chr7 (304-468)||(29434578-29434742)
chr7 (300-468)||(7425875-7426045)
chr7 (305-468)||(23703861-23704025)
chr7 (300-468)||(29257488-29257656)
chr7 (304-468)||(33584508-33584672)
chr7 (345-468)||(48981642-48981765)
chr7 (300-450)||(40590841-40590991)
chr7 (336-468)||(18235166-18235299)
chr7 (300-436)||(46288461-46288597)
chr7 (336-461)||(49100507-49100634)
chr7 (301-468)||(38181872-38182039)
chr7 (300-462)||(44604482-44604643)
chr7 (384-473)||(21387473-21387562)
chr7 (304-468)||(28333116-28333279)
chr7 (303-468)||(33774042-33774204)
chr7 (301-451)||(37496412-37496562)
chr7 (300-468)||(32775923-32776092)
chr7 (300-457)||(40803635-40803792)
chr7 (300-447)||(37157112-37157259)
chr7 (345-447)||(37490637-37490739)
chr7 (300-373)||(39693732-39693805)
chr7 (300-468)||(34064156-34064323)
chr7 (318-468)||(37264272-37264422)
chr7 (348-442)||(23186167-23186261)
chr7 (318-424)||(30659522-30659628)
chr7 (318-450)||(2849214-2849346)
chr7 (311-447)||(5068320-5068453)
chr7 (333-442)||(38589708-38589817)
chr7 (304-405)||(45890898-45890998)
chr7 (392-473)||(46095413-46095494)
chr7 (323-447)||(17265991-17266115)
chr7 (303-381)||(46095533-46095611)
chr7 (300-445)||(3667898-3668043)
chr7 (318-463)||(39343674-39343819)
chr7 (324-424)||(10355777-10355877)
chr7 (304-450)||(7456600-7456749)
chr7 (304-403)||(12308324-12308422)
chr7 (306-468)||(40038107-40038270)
chr7 (310-468)||(9602812-9602970)
chr7 (310-468)||(9830383-9830541)
chr7 (398-468)||(23058858-23058927)
chr7 (318-468)||(27337871-27338020)
chr7 (300-450)||(2842068-2842214)
chr7 (330-424)||(18731413-18731504)
chr7 (304-367)||(5083573-5083636)
chr7 (311-442)||(8149911-8150042)
chr7 (324-424)||(14648961-14649063)
chr7 (358-445)||(25778743-25778830)
chr7 (326-444)||(30462627-30462745)
chr7 (326-451)||(29997044-29997169)
chr7 (391-468)||(45218156-45218233)
chr7 (300-349)||(48981320-48981369)
chr7 (340-468)||(27234484-27234612)
chr7 (392-468)||(34001857-34001933)
chr7 (305-421)||(40023772-40023887)
chr7 (392-470)||(24288456-24288534)
chr7 (324-381)||(23111615-23111672)
chr7 (392-468)||(1643336-1643412)
chr7 (432-468)||(5083470-5083506)
chr7 (305-445)||(27242751-27242891)
chr7 (325-405)||(39498640-39498720)
chr7 (359-437)||(25940778-25940856)
chr7 (315-356)||(21387716-21387757)
chr7 (304-353)||(27621779-27621828)
chr7 (392-468)||(32972016-32972092)
[»] chr5 (79 HSPs)
chr5 (318-468)||(7613666-7613816)
chr5 (300-468)||(11099476-11099644)
chr5 (305-468)||(25814310-25814473)
chr5 (300-468)||(42575637-42575805)
chr5 (313-468)||(20189846-20190001)
chr5 (300-468)||(35334525-35334693)
chr5 (308-462)||(35646094-35646248)
chr5 (305-452)||(4412329-4412474)
chr5 (300-468)||(3725128-3725295)
chr5 (300-468)||(39008070-39008241)
chr5 (300-468)||(8369695-8369864)
chr5 (303-468)||(8692817-8692982)
chr5 (300-468)||(33988140-33988309)
chr5 (305-468)||(17242953-17243115)
chr5 (300-447)||(6610776-6610925)
chr5 (305-439)||(13135699-13135833)
chr5 (306-462)||(22582877-22583032)
chr5 (300-450)||(5357834-5357984)
chr5 (305-468)||(858281-858444)
chr5 (301-468)||(33012296-33012463)
chr5 (300-445)||(4044499-4044643)
chr5 (326-462)||(39183632-39183767)
chr5 (303-445)||(41184061-41184203)
chr5 (303-468)||(42211276-42211438)
chr5 (300-451)||(4475186-4475338)
chr5 (305-450)||(36469111-36469260)
chr5 (300-451)||(39212566-39212724)
chr5 (300-444)||(72128-72272)
chr5 (304-373)||(13716955-13717024)
chr5 (359-447)||(6735377-6735465)
chr5 (358-450)||(16283604-16283696)
chr5 (304-402)||(15814608-15814703)
chr5 (312-468)||(6629392-6629548)
chr5 (310-442)||(13016389-13016521)
chr5 (358-463)||(32539661-32539766)
chr5 (375-451)||(24231026-24231102)
chr5 (345-468)||(25108559-25108682)
chr5 (345-468)||(25111147-25111270)
chr5 (345-468)||(25167651-25167774)
chr5 (345-468)||(25170238-25170361)
chr5 (300-422)||(34534865-34534985)
chr5 (310-442)||(13087767-13087899)
chr5 (323-451)||(35585632-35585761)
chr5 (365-450)||(36446704-36446789)
chr5 (323-468)||(42818868-42819012)
chr5 (300-448)||(16926110-16926256)
chr5 (300-367)||(7276324-7276391)
chr5 (310-461)||(15898143-15898293)
chr5 (429-468)||(41184730-41184769)
chr5 (300-445)||(13597970-13598116)
chr5 (358-464)||(16883934-16884040)
chr5 (323-468)||(36006891-36007034)
chr5 (318-403)||(4194599-4194684)
chr5 (300-353)||(9426667-9426720)
chr5 (304-373)||(14259612-14259681)
chr5 (300-353)||(20369216-20369269)
chr5 (317-442)||(31090262-31090387)
chr5 (358-450)||(15254764-15254856)
chr5 (367-442)||(25344763-25344838)
chr5 (304-424)||(30437782-30437904)
chr5 (303-424)||(5072896-5073015)
chr5 (330-420)||(7179527-7179617)
chr5 (358-424)||(19889576-19889642)
chr5 (358-424)||(43525477-43525543)
chr5 (387-444)||(16954893-16954949)
chr5 (391-468)||(35988666-35988742)
chr5 (300-381)||(39035941-39036021)
chr5 (305-424)||(31956675-31956795)
chr5 (324-424)||(42479508-42479607)
chr5 (393-468)||(7311179-7311254)
chr5 (310-373)||(24534553-24534616)
chr5 (389-468)||(39060421-39060500)
chr5 (358-468)||(6172979-6173089)
chr5 (324-463)||(33498498-33498639)
chr5 (338-451)||(43572984-43573098)
chr5 (317-373)||(14184142-14184199)
chr5 (396-468)||(35666922-35666994)
chr5 (300-348)||(38978696-38978744)
chr5 (300-336)||(41686622-41686658)
[»] scaffold0058 (1 HSPs)
scaffold0058 (338-468)||(14435-14565)
[»] scaffold0006 (1 HSPs)
scaffold0006 (300-463)||(229765-229927)
[»] scaffold0321 (1 HSPs)
scaffold0321 (301-468)||(9550-9714)
[»] scaffold0045 (1 HSPs)
scaffold0045 (338-442)||(26301-26405)
[»] scaffold0001 (1 HSPs)
scaffold0001 (303-450)||(394723-394869)
[»] scaffold0007 (2 HSPs)
scaffold0007 (304-468)||(230202-230365)
scaffold0007 (305-382)||(157973-158050)
[»] scaffold0221 (2 HSPs)
scaffold0221 (341-449)||(8869-8977)
scaffold0221 (331-424)||(10833-10926)
[»] scaffold0034 (1 HSPs)
scaffold0034 (338-462)||(98805-98928)
[»] scaffold0028 (1 HSPs)
scaffold0028 (301-448)||(26550-26702)
[»] scaffold0020 (1 HSPs)
scaffold0020 (301-451)||(171169-171318)
[»] scaffold0086 (1 HSPs)
scaffold0086 (305-424)||(5765-5883)
[»] scaffold0155 (1 HSPs)
scaffold0155 (323-424)||(7996-8097)
[»] scaffold0003 (1 HSPs)
scaffold0003 (339-450)||(352477-352589)
[»] scaffold0685 (1 HSPs)
scaffold0685 (326-445)||(6421-6541)
[»] scaffold0262 (1 HSPs)
scaffold0262 (358-450)||(12452-12544)
[»] scaffold0578 (1 HSPs)
scaffold0578 (323-381)||(3993-4051)
[»] scaffold0009 (1 HSPs)
scaffold0009 (303-364)||(219947-220008)


Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 99)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 30 - 246
Target Start/End: Original strand, 8065211 - 8065427
Alignment:
Q  30 ctaactggttcatcacaaaactaaattgtatccatacaaccttcaccctcatgaataggtttgtcatctacttccttagcaaaattaccttctagatcaa 129  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8065211 ctaactggttcatcacaaaactaatttgtatccatacaaccttcaccctaatgaataggtttttcatctacttccttagcaaaattaccttctagatcaa 8065310  T
Q  130 cctcttcttttgagtcatcaaaattaatgttaagggcaccgttttcttccgagtcccggtggtggagctatgctatgactagggaaggccacggcatgca 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8065311 cctcttcttttgagtcatcaaaattaatgttaagggcaccgttttcttccgagtcccggtggtggagctatgctatgactagggaaggccacggcatgca 8065410  T
Q  230 atcatttgtatataata 246  Q
    |||||||||||||||||    
T  8065411 atcatttgtatataata 8065427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 305 - 468
Target Start/End: Original strand, 39979726 - 39979889
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||| | |||||  |||||||||||||||||||||    
T  39979726 aaaataattgagttatttcacttttcaatacaatattaattactttttcccctttataactctaattaatattactttcatcatttccaattcaatatat 39979825  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  39979826 tccactttacatttatgatagtggagaatgcaccgatacttaacaagtgcacttaaaactattt 39979889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 49812170 - 49812338
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||| ||  ||| || ||||| |||    
T  49812170 gtcccaaaataactgagtcatttcacttttcaatacaatattaattatttttttccctttataactctaattaatactattttcatctttcccaatacaa 49812269  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  49812270 tatattccactttacatttatgatagtggataatgcaccaatacttaacaagtgcacttaaaactattt 49812338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 300 - 463
Target Start/End: Complemental strand, 18849925 - 18849762
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| ||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||| | |||||  |  | |||||||||||    
T  18849925 gtcccaaaataactgagtcatttcacttttcaataaaatattaattacttttttccctttataactctaattaatattactttcacaacttccaattcaa 18849826  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaac 463  Q
    |||||| |||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  18849825 tatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaac 18849762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 338 - 468
Target Start/End: Original strand, 38976970 - 38977101
Alignment:
Q  338 tattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagag-aatgca 436  Q
    |||||||||||||||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||||||||||||||||  ||| ||||||    
T  38976970 tattaattacttttttccctttataactctaattaatactactttcatcattttcaattcaatatattccactttacatttatgataggggagaaatgca 38977069  T
Q  437 ccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||| ||||||||||||||||||||    
T  38977070 ccaatacttaagaagtgcacttaaaactattt 38977101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 304 - 443
Target Start/End: Original strand, 48740465 - 48740604
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||| | |||||  |||||||  |||||||||||    
T  48740465 caaaataactgagtcatttcacttttcaaaacaatattaattacttttttccctttataactctaattaatattacttttatcatttttaattcaatata 48740564  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatac 443  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  48740565 ttccactttacatttatgatagtggagaatgcaccaatac 48740604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 1825414 - 1825244
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||| ||||||||| |||||||||||| | ||||||||| |||||||  ||||||||||||||||| | || ||  ||||||| ||||||||    
T  1825414 gtcctaaaataactgagtcatttcacttttcaatataatattaattatttttttctttttataactctaattaatattattttcatcattttcaattcaa 1825315  T
Q  400 tatattccactttacatttatgatagtagagaatgc--accaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||||||| ||| ||||||||  || ||||||||||||||||||||||||||||||    
T  1825314 tatattccactttacatttatgaaagttgagaatgcatactaatacttaacaagtgcacttaaaactattt 1825244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 41710310 - 41710142
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| ||||  ||| ||||||||||||||  ||||||||||||||||||||||||||||||||||| | |||||  |||| | |||||||||    
T  41710310 gtcccaaaataagtgagctatttcacttttcaatacatcattaattacttttttccctttataactctaattaatattactttcatcactcccaattcaa 41710211  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||| ||||||||||||| || |||  ||||||| |||||||| ||||||||||| ||||    
T  41710210 tatattccactttgcatttatgatagtggaaaatagaccaataattaacaagagcacttaaaaccattt 41710142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 49306528 - 49306696
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| |||| |||| ||||||||||||||  |||||||| |||||| ||||||||||||||||||| |||||||  |||| | | |||||||    
T  49306528 gtcccaaaataagtgagccatttcacttttcaatacatcattaattattttttttcctttataactctaattaatactactttcatcactcctaattcaa 49306627  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||| ||||||||||||  ||||||  |||||||||||||||| ||||||||||| ||||    
T  49306628 tatattccactttgcatttatgataggggagaatagaccaatacttaacaagagcacttaaaaccattt 49306696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 304 - 468
Target Start/End: Complemental strand, 54729645 - 54729482
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||| ||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||  ||||  | ||||||||||||    
T  54729645 caaaataactgaatcatttcactttccaatacaatattaattacttttttccctttataactctaattaatactactttcatcacct-caattcaatata 54729547  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||| ||||||||||||| |||||| ||| ||||||||||||   |||||||||||||||    
T  54729546 ttccactttgcatttatgatagtggagaatacactaatacttaacaaaaacacttaaaactattt 54729482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 300 - 443
Target Start/End: Original strand, 29644296 - 29644439
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| |||| |||| |||||||||||||| ||||||| |||||||||| ||||||||| ||||||| |||||||  ||||||  ||||||||    
T  29644296 gtcccaaaataactgagacatttcacttttcaatacaatattaataacttttttccttttataactataattaatactactttcatcattctcaattcaa 29644395  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatac 443  Q
    ||||||| |||||||||||||||||||||||||||||| |||||    
T  29644396 tatattctactttacatttatgatagtagagaatgcactaatac 29644439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 304 - 446
Target Start/End: Complemental strand, 44020924 - 44020782
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||||||| |||||  ||||||| ||||| ||||||||||||||||| ||||||||||||||| || |||||||  |||||||| ||||||||||     
T  44020924 caaaataattgaatcattttacttttcgatacaatattaattacttttttctctttataactctaatcaatactactttcatcatttctaattcaatatg 44020825  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatactta 446  Q
    ||||||||||||||||||||||| || ||||||||||||||||    
T  44020824 ttccactttacatttatgatagtggataatgcaccaatactta 44020782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 308 - 468
Target Start/End: Complemental strand, 42024359 - 42024199
Alignment:
Q  308 ataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattcc 407  Q
    |||| ||||||||| ||||||||||||||  |||||||| |||||||||||||||||| ||||||| |||||||  |||| |||||||||||||||||||    
T  42024359 ataaatgagtcatttcacttttcaatacatcattaattatttttttccctttataactataattaatactactttcatcacttccaattcaatatattcc 42024260  T
Q  408 actttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||| ||||||| ||||| ||||||  |||||||||||||||| | | ||||||| ||||    
T  42024259 actttgcatttataatagtggagaatagaccaatacttaacaagagtagttaaaaccattt 42024199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 47788013 - 47787845
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||||| ||||||   ||||||||||||| |||||||||||||||| | ||||||||||||||||| |||||||  ||||||| |||||| |    
T  47788013 gtcccaaaataattaagtcatataacttttcaatacaatattaattactttttttcttttataactctaattaatactactttcatcattttcaattcca 47787914  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||  | |||||||||||||||||  || ||||| || |||||||||||||| |||||||||||||    
T  47787913 tatattttattttacatttatgatagtgaaggatgcatcagtacttaacaagtgcccttaaaactattt 47787845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 323 - 468
Target Start/End: Complemental strand, 4360551 - 4360406
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    ||||||||||||||  |||||||||||||||||   ||||||||||||||| |||||||  ||||||  ||||||||||||||||||||| ||||||||     
T  4360551 cacttttcaatacaacattaattacttttttccaaatataactctaattaatactactttcatcattcacaattcaatatattccactttgcatttatgc 4360452  T
Q  423 tagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||| |||||||||||||||||||||||  ||||||||||| ||||    
T  4360451 tagtggagaatgcaccaatacttaacaaaagcacttaaaaccattt 4360406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 8294972 - 8295138
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||||||  |||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| | |||||||  |||  | |||||||||    
T  8294972 gtcccaaaataaccgagtcatttcacttttcaatacaatattaattacctttttccctttataactctaatttatactactttcatc--tcccaattcaa 8295069  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||  || || ||||||||||||| ||||||||||||||||||| |||| | ||||||||| ||||    
T  8295070 tatattatacattgcatttatgatagtggagaatgcaccaatacttatcaagaggacttaaaacaattt 8295138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 305 - 462
Target Start/End: Original strand, 42544155 - 42544312
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||||||||| ||||||||||||||  ||||| ||||||||| ||||||||||||||||||| | |||||  |||| |  |||||||||||||    
T  42544155 aaaataaatgagtcatttcacttttcaatacatcattaactactttttttcctttataactctaattaatattacttttatcactcacaattcaatatat 42544254  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    |||||||| ||||||||||||| ||||||  || ||||||||||||| ||||||||||    
T  42544255 tccactttgcatttatgatagtggagaatagactaatacttaacaagagcacttaaaa 42544312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 300 - 464
Target Start/End: Original strand, 3685952 - 3686116
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||| ||||||||| |||||| ||||||| ||||||||| ||||| |||||||||||||||||||| | |||||  |||| |  ||||||||    
T  3685952 gtcctaaaataactgagtcatttcactttccaatacaatattaattattttttcccctttataactctaattaatattactttcatcactctcaattcaa 3686051  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaact 464  Q
    ||||||| ||||| ||||||| ||||| |||||||||||||||||||||||  | ||||||||||    
T  3686052 tatattcaactttgcatttataatagtggagaatgcaccaatacttaacaaaagtacttaaaact 3686116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 303 - 442
Target Start/End: Original strand, 51527363 - 51527501
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    ||||| ||| ||||||||| ||||||| |||||| |||||||||||||||||| ||||||||||||||||| | || ||  ||||||| |||||||||||    
T  51527363 ccaaagtaactgagtcatttcactttttaatacaatattaattacttttttccttttataactctaattaatatta-tttcatcattttcaattcaatat 51527461  T
Q  403 attccactttacatttatgatagtagagaatgcaccaata 442  Q
    ||| |||||||||||||||||||| |||||||||||||||    
T  51527462 atttcactttacatttatgatagtggagaatgcaccaata 51527501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 300 - 462
Target Start/End: Complemental strand, 42185962 - 42185800
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| |||||||||  |||||||||||||  ||||||||||||||||| ||||||||||||||||| |||||||  |||| |  ||||||||    
T  42185962 gtcccaaaataagtgagtcattttacttttcaatacatcattaattacttttttccatttataactctaattaatactactttcatcactctcaattcaa 42185863  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    |||||| ||| ||  |||||||||||| || |||  |||||||||||||||| ||||||||||    
T  42185862 tatatttcaccttgtatttatgatagtggataatagaccaatacttaacaagagcacttaaaa 42185800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 302 - 468
Target Start/End: Complemental strand, 40881357 - 40881190
Alignment:
Q  302 cccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaata 401  Q
    ||||||||||  |||||||| |||||||||||||| || ||||||||||||||| |||||||||||||| || |||||||   ||||||| |||||||||    
T  40881357 cccaaaataaccgagtcatttcacttttcaatacaatagtaattacttttttccttttataactctaataaatactactt---tcatttctaattcaata 40881261  T
Q  402 ----tattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
        ||||||||||||||||||||||||| |||||| || ||||| ||||||| || | ||||||||||||    
T  40881260 tatttattccactttacatttatgatagtggagaatacatcaatatttaacaaatgtaattaaaactattt 40881190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 41203681 - 41203846
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttcccttt-ataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    |||| ||| ||||||||| ||||| |||||||| |||||||||||||||| | ||| |||||||||||||| |||||||  |||| || |||||||||||    
T  41203681 caaactaactgagtcatttcacttatcaatacaatattaattactttttttcattttataactctaattaatactacttttatcactttcaattcaatat 41203780  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||  ||||||| ||||  |||||||| |||||||||||||| ||||| ||||| ||||    
T  41203781 attccactttgtatttatggtagtgaagaatgcatcaatacttaacaagagcactaaaaaccattt 41203846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 323 - 468
Target Start/End: Original strand, 41436445 - 41436590
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    |||||||||||||| ||||||||| |||||||   |||||||||||||||| |||||||  ||||||  |||||||| |||||| ||||| |||||||||    
T  41436445 cacttttcaatacaatattaattatttttttctaattataactctaattaatactactttcatcattcgcaattcaaaatattctactttgcatttatga 41436544  T
Q  423 tagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||| |||||||||||||||| ||||||  ||||||||||| ||||    
T  41436545 tagtggagaatgcaccaatacataacaaaagcacttaaaaccattt 41436590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 33047439 - 33047601
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||||| |||||   |||||||||||||| || ||||     |||| |||||||||||    
T  33047439 gtcccaaaataactgagtcatttcacttttcaatacaatattaattacattttt---tttataactctaatcaatactatc---atcacttccaattcaa 33047532  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||  |||||||||||| ||||||  |||||||||||||||  ||||||||||| ||||    
T  33047533 tatattccactttgtatttatgatagtggagaatctaccaatacttaacaaaagcacttaaaaccattt 33047601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 300 - 463
Target Start/End: Complemental strand, 39976557 - 39976393
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttcc-ctttataactctaattaacactacttaaatcatttccaattca 398  Q
    |||||||||||  ||||||||| || |||||||| || |||||||||||||||| | ||||||||| || ||||| |||||||  |||| |  |||||||    
T  39976557 gtcccaaaatatctgagtcatttcatttttcaatgcaatattaattactttttttctctttataacactgattaatactactttcatcactctcaattca 39976458  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaac 463  Q
    |||||||||||||| ||||| | | ||| |||||||||||||||||||||||| |||||||||||    
T  39976457 atatattccactttgcatttctaacagtggagaatgcaccaatacttaacaagagcacttaaaac 39976393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 300 - 448
Target Start/End: Complemental strand, 51572393 - 51572246
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||||||| | ||| |||||||||||||| ||||||||  ||||||    |||||||||||||||| |||||||  |||| |||||||||||    
T  51572393 gtcctaaaataattgacttatttcacttttcaatacaatattaatt-tttttttttaattataactctaattaatactacttttatcacttccaattcaa 51572295  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaac 448  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  51572294 tatattacactttacatttatgatagtagaaaatgcaccaatacataac 51572246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 395 - 474
Target Start/End: Original strand, 8065569 - 8065648
Alignment:
Q  395 ttcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactatttattttt 474  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8065569 ttcaatatataccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattttttttt 8065648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 323 - 468
Target Start/End: Original strand, 17237007 - 17237152
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    |||||||||||| | ||||||||| |||||| |  |||||||||||||||| |||||||  |||  || ||||||||||||||||||||| |||||||||    
T  17237007 cacttttcaatataatattaattaatttttttcaattataactctaattaatactactttcatcgctttcaattcaatatattccactttgcatttatga 17237106  T
Q  423 tagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||| ||||| ||| ||||||||||||   |||||||||||||||    
T  17237107 tagtaaagaatccactaatacttaacaaaatcacttaaaactattt 17237152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 388 - 468
Target Start/End: Complemental strand, 9093840 - 9093760
Alignment:
Q  388 tttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  9093840 tttccaatttaatatattccactttacatttatgatagtggagaatgcacaaatacttaacaagtgcacttaaaactattt 9093760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 329 - 468
Target Start/End: Original strand, 25149421 - 25149561
Alignment:
Q  329 tcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtag 428  Q
    ||||||||  |||||||||||||||||  |||||||||||||||| |||||||  |  | ||||||||||||||||||||||||||||||||||||  ||    
T  25149421 tcaatacaacattaattacttttttccaattataactctaattaatactactttcacaacttccaattcaatatattccactttacatttatgataaaag 25149520  T
Q  429 a-gaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    | |||||||||||||||||| ||  ||||| ||||||||||    
T  25149521 aggaatgcaccaatacttaaaaaaggcactcaaaactattt 25149561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 324 - 468
Target Start/End: Complemental strand, 22872530 - 22872384
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgat 423  Q
    |||||||||| || ||||||||||||||||||  |||||||||||||||| | |||||  |||| |  ||||||||||||||||||||| ||||||||||    
T  22872530 acttttcaatgcaatattaattacttttttccaattataactctaattaatattactttcatcactctcaattcaatatattccactttgcatttatgat 22872431  T
Q  424 agtagagaatgcaccaatacttaacaa--gtgcacttaaaactattt 468  Q
    | | |||||||||||||||||| ||||  | ||||||||||| ||||    
T  22872430 aatggagaatgcaccaatacttgacaaacgagcacttaaaaccattt 22872384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 34020980 - 34021146
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaatta--acactacttaaatcatttccaattcaata 401  Q
    |||||||| ||||||||| |||||||||||||| ||| ||||| |||||||||||||||||||||||||  | | ||| |  |||| |  ||||||||||    
T  34020980 caaaataagtgagtcatttcacttttcaatacaatataaattatttttttccctttataactctaattaatatattaccttcatcactctcaattcaata 34021079  T
Q  402 tattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||  ||||| ||||||||||||||||||||||||||||||  ||||||  |||| |||| |||||    
T  34021080 tattagactttgcatttatgatagtagagaatgcaccaataccgaacaagaacactgaaaattattt 34021146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 305 - 468
Target Start/End: Original strand, 49448785 - 49448950
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccct--ttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    ||||||| |||  |||| |||||||||||| | ||||||||||||||||   |  |||||||||||||||| |||||||  ||||||  |||||||||||    
T  49448785 aaaataactgatccatttcacttttcaatataatattaattacttttttttttaattataactctaattaatactactttcatcattctcaattcaatat 49448884  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||  ||||| ||||||||||| |||||||||||| ||||||| ||||| ||||||||||| ||||    
T  49448885 attatactttgcatttatgataatagagaatgcacaaatacttgacaagagcacttaaaaccattt 49448950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 283643 - 283475
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||  | || |||| ||||||||||| || ||||||||||||||||| ||||| ||  || ||||| |||||||  |||| | ||||||| |    
T  283643 gtcccaaaatatctaagccatttcacttttcaatgcaatattaattacttttttctctttagaatgctgattaatactactttcatcactcccaattcta 283544  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||  |||| | ||||| |||||||||| ||||||||||||| ||||||||||| ||||    
T  283543 tatattccactttgaatttctaatagtggagaatgcacaaatacttaacaagagcacttaaaacaattt 283475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 304 - 463
Target Start/End: Original strand, 28974252 - 28974410
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||||||| |||||||||||||| ||||||| | |||||||  ||||||| ||| ||||| |||||||  |||| |  || |||||||||    
T  28974252 caaaataactgagtcatttcacttttcaatacaatattaataatttttttca-tttataattctgattaatactactttcatcactctcatttcaatata 28974350  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaac 463  Q
    |||| |||| ||||||||||| | |||||||||||||||||||||||   ||||||||||    
T  28974351 ttcccctttgcatttatgataatggagaatgcaccaatacttaacaacaacacttaaaac 28974410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 303 - 445
Target Start/End: Complemental strand, 35998281 - 35998138
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattact-tttttccctttataactctaattaacactacttaaatcatttccaattcaata 401  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||| | ||||||||||||||||||||||||| |||||||  | || |  ||||||||||    
T  35998281 ccaaaataattgagtcatttcacttttcgatacaatattaattattatttttccctttataactctaattaatactactttcaccactctcaattcaata 35998182  T
Q  402 tattccactttacatttatgatagtagagaatgcaccaatactt 445  Q
    ||||  |||||||||||||||||    |||||| ||||||||||    
T  35998181 tattttactttacatttatgataaagaagaatgtaccaatactt 35998138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 445
Target Start/End: Complemental strand, 39053062 - 39052922
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    ||||||||||||| |||| |||||||||||| | |||||| || |||||||| ||||||||||||||||| |||||||  | || |  ||||||||||||    
T  39053062 caaaataattgagccatttcacttttcaatataatattaacta-ttttttccttttataactctaattaatactactttcaccactctcaattcaatata 39052964  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatactt 445  Q
    ||| |||||||||||||||||    |||||||||||||||||    
T  39052963 ttctactttacatttatgataaagaagaatgcaccaatactt 39052922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 310 - 442
Target Start/End: Original strand, 38319862 - 38319994
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccac 409  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||||  ||||||| |||||||| |||||||  |||| |  ||||||||||||||| ||    
T  38319862 aattgactcatttcacttttcaatacaatattaattacttttttccaattataacactaattaatactactttcatcactctcaattcaatatattctac 38319961  T
Q  410 tttacatttatgatagtagagaatgcaccaata 442  Q
    ||| |||||||||||    ||||||||||||||    
T  38319962 tttgcatttatgataaagaagaatgcaccaata 38319994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 304 - 451
Target Start/End: Original strand, 37309643 - 37309790
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||  ||||| ||| || ||||||||| | |||||| || | |||| ||||||||||||||||||| | |||||  |||| |  ||||||||||||    
T  37309643 caaaatatctgagttatttcagttttcaatagaatattaactattgtttttcctttataactctaattaatattactttcatcactctcaattcaatata 37309742  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    ||  ||||| ||||||||||||||||||||||| ||||||||||||||    
T  37309743 tttaactttgcatttatgatagtagagaatgcatcaatacttaacaag 37309790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 305 - 445
Target Start/End: Complemental strand, 34791113 - 34790972
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    |||||||||||||||||  |||||| |||||| |||||||||||||||| ||||||||||||||||||| ||||| |  |||| |  |||||||||||||    
T  34791113 aaaataattgagtcattttactttttaatacaatattaattactttttttcctttataactctaattaatactacatttatcactctcaattcaatatat 34791014  T
Q  405 tccac-tttacatttatgatagtagagaatgcaccaatactt 445  Q
    || || ||||| |||||||||    ||||||||| |||||||    
T  34791013 tctacttttacttttatgataaagaagaatgcacaaatactt 34790972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 468
Target Start/End: Original strand, 31862736 - 31862898
Alignment:
Q  301 tcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattc-aa 399  Q
    |||||||||||  |||||||| |||||||||||||  ||||||||| |||||||||||||||||||||||||| |||||||   |||   | | ||| ||    
T  31862736 tcccaaaataaccgagtcatttcacttttcaatacgatattaattatttttttccctttataactctaattaatactactt---tca---caacttctaa 31862829  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||| ||| |||||||||  ||| |||| |||||||||||||| | | ||||||| ||||    
T  31862830 tatattccactttgcatctatgatagtgaagagtgcatcaatacttaacaagagaaattaaaaccattt 31862898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 326 - 468
Target Start/End: Original strand, 18509808 - 18509950
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    ||||||||||  ||||||||||||||||   || |||||||||||||| |||| ||  | || || || ||||||||||||||||||  ||||||| |||    
T  18509808 ttttcaatacgatattaattacttttttattttaataactctaattaatactattttcaccacttacacttcaatatattccactttgtatttatgttag 18509907  T
Q  426 tagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||| |||||||||||||||||||||   |||||||| |||||    
T  18509908 tagataatgcaccaatacttaacaagaatacttaaaaatattt 18509950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 323 - 450
Target Start/End: Original strand, 27977107 - 27977238
Alignment:
Q  323 cacttttcaatacagtattaattactttttt----ccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacattt 418  Q
    ||||||||||||||  |||||||||||||||    ||  |||||||||||||||| |  ||||  |||| |  ||||||||||||||||||||| |||||    
T  27977107 cacttttcaatacaacattaattacttttttttttcctattataactctaattaatatcactttcatcactctcaattcaatatattccactttgcattt 27977206  T
Q  419 atgatagtagagaatgcaccaatacttaacaa 450  Q
    || ||||| |||||||||||||||||||||||    
T  27977207 ataatagtggagaatgcaccaatacttaacaa 27977238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 305 - 462
Target Start/End: Complemental strand, 39258438 - 39258273
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagta------ttaattacttttttccctttataactctaattaacactacttaaatcatttccaattca 398  Q
    ||||||||||||||||| ||||| | |||||| ||      ||||||| |||||||||||||||||| ||||||| | |||||  |||| |  ||||| |    
T  39258438 aaaataattgagtcatttcacttattaatacaatactctaattaatta-ttttttccctttataactttaattaataatactttcatcactctcaattta 39258340  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaata---cttaacaagtgcacttaaaa 462  Q
    |||||||||| |||||||||||||||||| ||||||||| ||||   ||||||||| ||||||||||    
T  39258339 atatattccattttacatttatgatagtaaagaatgcacgaatagtgcttaacaagagcacttaaaa 39258273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 324 - 468
Target Start/End: Original strand, 32559128 - 32559272
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgat 423  Q
    ||||||||||||| ||||||||||||| | || ||||||||||||||||| |||||||  |||| | | |||| ||||||||||| ||| || |||| ||    
T  32559128 acttttcaatacaatattaattactttctcccttttataactctaattaatactactttcatcactcctaatttaatatattccattttgcacttattat 32559227  T
Q  424 agtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||| |||||| ||  ||||||||||||  ||| |||||| |||||    
T  32559228 agtggagaatacattaatacttaacaaaagcatttaaaaatattt 32559272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 424
Target Start/End: Original strand, 42132781 - 42132878
Alignment:
Q  327 tttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    |||||||||| ||||||||||||||||||  ||||||| |||||||| | |||||  | || |||||||||||||||||| ||||| |||||||||||    
T  42132781 tttcaatacaatattaattacttttttccaattataacactaattaatattactttcaccacttccaattcaatatattctactttgcatttatgata 42132878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 468
Target Start/End: Original strand, 44633109 - 44633265
Alignment:
Q  312 ttgagtcattccacttttcaatacagtattaattac-ttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccact 410  Q
    |||| ||||| ||||||||||||||  ||||||||| ||||||||  |||||||||||||||| |||||||  | || || ||||||||||| ||| |||    
T  44633109 ttgactcatttcacttttcaatacaacattaattactttttttccaattataactctaattaatactactttcaccactttcaattcaatat-ttctact 44633207  T
Q  411 ttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||| |||    ||||||||||||||||| ||||   |||| ||||||||||    
T  44633208 ttacatttatcataaagaagaatgcaccaatacttgacaaagacactcaaaactattt 44633265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 336 - 468
Target Start/End: Complemental strand, 26799346 - 26799214
Alignment:
Q  336 agtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgc 435  Q
    ||||||||||||| ||||   ||||||||||||||||| | |||||  ||||||  ||||||||||||||| | ||| ||||||||||||| || ||| |    
T  26799346 agtattaattactctttttattttataactctaattaatagtactttcatcattctcaattcaatatattctattttgcatttatgatagtggaaaatac 26799247  T
Q  436 accaatacttaacaagtgcacttaaaactattt 468  Q
    | |||||||||| |||  |||||||| ||||||    
T  26799246 atcaatacttaaaaagaacacttaaatctattt 26799214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 312 - 468
Target Start/End: Original strand, 28279790 - 28279946
Alignment:
Q  312 ttgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactt 411  Q
    |||| ||||| ||||||||||||||  ||||||||||||||| |  |||||||||||||||| |||| ||  |    |||||||| ||||||||| ||||    
T  28279790 ttgactcatttcacttttcaatacaacattaattactttttttcaattataactctaattaatactattttcactgcttccaattaaatatattctactt 28279889  T
Q  412 tacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    || ||||||||||    | ||||||||||||||||||||   |||| ||||||||||    
T  28279890 tatatttatgataaagaaaaatgcaccaatacttaacaaagacactcaaaactattt 28279946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 392 - 468
Target Start/End: Complemental strand, 50328145 - 50328069
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||| |||||| ||||||||||||| | |||||||||||||||| |||||| |||||||||| ||||    
T  50328145 caattcaatatatttcactttgcatttatgatagtggtgaatgcaccaatacttgacaagtacacttaaaaccattt 50328069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 475
Target Start/End: Complemental strand, 10099867 - 10099716
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgat 423  Q
    ||||||||||| |  |||||| |||||||| |  |||||||||||||||| |||||||  |  | | |||||||||||||||| |||||| |||||||||    
T  10099867 acttttcaatataacattaataactttttttcaattataactctaattaatactactttcacaactcccaattcaatatattctactttaaatttatgat 10099768  T
Q  424 agtagagaatgcaccaatacttaacaagtgcacttaaaactatttatttttc 475  Q
    |    | ||||||||||||||||| || | |||| |||||||||| ||||||    
T  10099767 aaagaaaaatgcaccaatacttaaaaaatacactcaaaactatttttttttc 10099716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 468
Target Start/End: Complemental strand, 43335184 - 43335021
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||| | ||| |||||||||||||| |||||||||||||||  |  |||| ||| ||||||| |||||||   ||| |  |||||||||||||    
T  43335184 aaaataactgatttatttcacttttcaatacaatattaattactttttatcaattatgactataattaatactactttcttcactctcaattcaatatat 43335085  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||| ||||||  ||| | |||||||||| |||| || |||||  ||||||||| |||||    
T  43335084 tccactttccatttaaaataatggagaatgcactaatatttgacaagaacacttaaaattattt 43335021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 424
Target Start/End: Complemental strand, 48400791 - 48400673
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |||||| ||||  ||||||||||| |  ||||  |  | |  |||||||||||||    
T  48400791 aaaataattgagtcatttcacttttcaatacaatattaattact-ttttccttttacgactctaattaatatcactttcacaactctcaattcaatatat 48400693  T
Q  405 tccactttacatttatgata 424  Q
    || |||||||||||||||||    
T  48400692 tctactttacatttatgata 48400673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 470
Target Start/End: Original strand, 50714566 - 50714693
Alignment:
Q  343 attacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaata 442  Q
    ||||||||||||   ||||||| || ||| | |||||||  ||||||  |||||||||||||||||||||  |||||||||| | | |||||||| | ||    
T  50714566 attacttttttctaattataacactcatttatactactttcatcattctcaattcaatatattccactttcaatttatgataatggtgaatgcactacta 50714665  T
Q  443 cttaacaagtgcacttaaaactatttat 470  Q
    ||| ||||| ||||||||||||||||||    
T  50714666 cttgacaagagcacttaaaactatttat 50714693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 446
Target Start/End: Complemental strand, 16493461 - 16493317
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||||||| ||||||||  ||||||||||| ||||| ||  |  ||| || || ||||||||||||||| | |||||  || | |||||||||||    
T  16493461 gtcccaaaataat-gagtcattttacttttcaatatagtataaaaaaaatttctctctctataactctaattaatattactttcataacttccaattcaa 16493363  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatactta 446  Q
    ||||||||||||| || |||||||||  |||||||||| ||||||||    
T  16493362 tatattccactttgca-ttatgatagctgagaatgcacaaatactta 16493317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 424
Target Start/End: Complemental strand, 29550875 - 29550769
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||||||  ||||||||| ||||| |  |||||||||||||||| |||||||  |  | | |||||||||||||||| ||||||||||    
T  29550875 catttcacttttcaatacaacattaattaccttttttcaattataactctaattaatactactttcacaactcccaattcaatatattctactttacatt 29550776  T
Q  418 tatgata 424  Q
    |||||||    
T  29550775 tatgata 29550769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 424
Target Start/End: Complemental strand, 37316070 - 37315964
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| |||||||||||||| |||||||||| |||||||  ||||||| |||||||| |||||||  | || | ||||||||| |||||| ||||| ||||    
T  37316070 catttcacttttcaatacaatattaattacatttttccaattataacactaattaatactactttcaccactcccaattcaacatattctactttgcatt 37315971  T
Q  418 tatgata 424  Q
    |||||||    
T  37315970 tatgata 37315964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 461
Target Start/End: Original strand, 47846863 - 47847000
Alignment:
Q  324 acttttcaatacagtattaattact-tttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    ||||||||||||| ||||||| | | ||||||   |||||||||||||||| |||||||  |||| | | ||||||||||||| |||||| |||||||||    
T  47846863 acttttcaatacaatattaataattctttttctaattataactctaattaatactactttcatcactcctaattcaatatatttcactttgcatttatga 47846962  T
Q  423 tagtagagaatgcaccaatacttaacaagtgcacttaaa 461  Q
    || |||||||||||| ||||| ||| ||| ||| |||||    
T  47846963 ta-tagagaatgcacaaatacataagaagagcatttaaa 47847000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 450
Target Start/End: Complemental strand, 55360505 - 55360364
Alignment:
Q  311 attgagtcattccacttttcaatacagtattaattacttttttc--cctttataactctaattaacactacttaaatcatttccaattcaatatattcca 408  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||   |  |||||||||||||||| | |||||  |||| |  ||||||||||||||  |    
T  55360505 attgattcatttcacttttcaatacaatattaattactttttttttcaattataactctaattaatattactttcatcactctcaattcaatatattgta 55360406  T
Q  409 ctttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||||||||||||||||    ||||||| ||||||||| ||||    
T  55360405 ctttacatttatgataaagaagaatgcgccaatacttgacaa 55360364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 26185129 - 26185291
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttcc-ctttataactctaattaacactacttaaatcatttccaattca 398  Q
    |||| ||||||| |||| |||| ||| ||||||||||  |||||||| |||||| | |||||||||||||||||| ||||||       ||  |||| ||    
T  26185129 gtccaaaaataagtgagccatttcacctttcaatacatcattaattattttttttctctttataactctaattaatactact-------ttctcaatgca 26185221  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    | ||||||||| || ||||||||||||| ||||||  |||||||||||||||| | | ||||||| ||||    
T  26185222 acatattccacgttgcatttatgatagtggagaatagaccaatacttaacaagagtatttaaaaccattt 26185291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 326 - 445
Target Start/End: Complemental strand, 42051796 - 42051677
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    ||||||||||| |||||||||||||||| |  |||||| ||||||||  | || ||  | || |||||||||| ||||||| |||||||||||||||||     
T  42051796 ttttcaatacaatattaattactttttttcaattataattctaattattattattttcaccacttccaattcattatattctactttacatttatgataa 42051697  T
Q  426 tagagaatgcaccaatactt 445  Q
       |||||||||||||||||    
T  42051696 agaagaatgcaccaatactt 42051677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 341 - 468
Target Start/End: Original strand, 46958704 - 46958830
Alignment:
Q  341 taattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaa 440  Q
    |||||||||||||||  |||||| || |||||| ||||||| ||||| |  ||||||||||||||| ||||| | |||||||||  |  ||||||||| |    
T  46958704 taattacttttttccaattataattcaaattaatactactttaatcactctcaattcaatatattctactttgcgtttatgataagaaggaatgcaccga 46958803  T
Q  441 tacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||  |||| ||||||||||    
T  46958804 tacttaacaag-acactcaaaactattt 46958830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 468
Target Start/End: Complemental strand, 35909641 - 35909571
Alignment:
Q  398 aatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||| |||||||||||||| ||||| || |||||||||||||||||||| | ||||||||| |||||    
T  35909641 aatatatttcactttacatttataatagtggaaaatgcaccaatacttaacaaatacacttaaaattattt 35909571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 424
Target Start/End: Complemental strand, 22020653 - 22020552
Alignment:
Q  324 acttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    ||||||||||||| ||||||||| |||||| ||  |||||||||||||||  |||||||  | ||||  ||||||||||||||| ||||| |||||||||    
T  22020653 acttttcaatacaatattaattattttttttccaattataactctaattattactactttcaccattctcaattcaatatattctactttgcatttatga 22020554  T
Q  423 ta 424  Q
    ||    
T  22020553 ta 22020552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 45289982 - 45290145
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattactttttt-ccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    |||||||| ||| | ||| ||||||||| |||| |||| |||| |||||| ||||||||||||||||| || | || ||  |||| | |||||| |||||    
T  45289982 caaaataactgaattatttcacttttcagtacaatatttattattttttttccctttataactctaatcaatattattttcatcactcccaattgaatat 45290081  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    | || ||||| |||||| |||||| |||||| ||||||||||| | ||  ||||||||||||||||    
T  45290082 actc-actttgcatttacgatagtggagaatacaccaatactt-agaatagcacttaaaactattt 45290145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 424
Target Start/End: Complemental strand, 29136931 - 29136831
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgat 423  Q
    |||||||||| || |||||||||||||||| |  |||||||||||||||| | || || | ||| | | |||||||||| ||||||||| ||||||||||    
T  29136931 acttttcaatgcaatattaattactttttttcaattataactctaattaataatattttagtcactccaaattcaatatcttccactttgcatttatgat 29136832  T
Q  424 a 424  Q
    |    
T  29136831 a 29136831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 323 - 468
Target Start/End: Complemental strand, 38160297 - 38160150
Alignment:
Q  323 cacttttcaatacagtattaattacttttttc--cctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttat 420  Q
    |||||||||||||| ||||||||| ||||||   |  |||||||||||||||| | |||||  |||| |  |||||||||||||| ||||||  ||||||    
T  38160297 cacttttcaatacaatattaattattttttttttcaattataactctaattaatattacttttatcactctcaattcaatatatttcactttgtatttat 38160198  T
Q  421 gatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||| | ||||||||| ||||| || ||||   |||||||||| ||||    
T  38160197 gataatggagaatgcatcaatatttgacaaagacacttaaaacaattt 38160150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 420
Target Start/End: Original strand, 49401621 - 49401717
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttat 420  Q
    |||||||||| ||  ||||||||||||| | |  |||| ||||||||||| || ||||  || |||||||||||||||||||| |||||||||||||    
T  49401621 acttttcaatgcaacattaattacttttcttcaattatgactctaattaataccactttcataatttccaattcaatatattctactttacatttat 49401717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 450
Target Start/End: Original strand, 4357552 - 4357658
Alignment:
Q  343 attacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaata 442  Q
    ||||||||||||| ||||||||||||||||| |||| ||  |||| | |||||||||||||||    |||  ||||||||||||  ||||| ||||||||    
T  4357552 attacttttttccatttataactctaattaatactattttcatcactcccaattcaatatatt-ttttttgtatttatgatagtgaagaatccaccaata 4357650  T
Q  443 cttaacaa 450  Q
    ||||||||    
T  4357651 cttaacaa 4357658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 29656509 - 29656583
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaatta-cttttttccctttataactctaattaa 373  Q
    |||||||||||| |||  |||| ||||||||||||||  ||||||||  ||||||||||||||||||||||||||    
T  29656509 gtcccaaaataagtgaaccatttcacttttcaatacatcattaattattttttttccctttataactctaattaa 29656583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 305 - 399
Target Start/End: Complemental strand, 42670531 - 42670437
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||| | || |||| ||| |||||||||| |||||||||| ||||| ||||||||||| ||||||| | |||||  || |||||||||||||    
T  42670531 aaaataacttagccatttcacctttcaatacaatattaattacattttttcctttataactttaattaatattactttcataatttccaattcaa 42670437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 326 - 424
Target Start/End: Complemental strand, 47277822 - 47277724
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    ||||||||| | |||||||||  ||||||   |||||||| ||||||| ||||||| ||||| |  ||||||||||||||  |||||||||||||||||    
T  47277822 ttttcaatatattattaattatatttttcaaattataactataattaatactactttaatcactctcaattcaatatattttactttacatttatgata 47277724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 310 - 424
Target Start/End: Original strand, 54217293 - 54217407
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccac 409  Q
    |||||| ||||| || ||||||||||| ||||||||||||||||||  |||||||  ||||||| || ||||  | || | |||||||||||||||  ||    
T  54217293 aattgactcatttcatttttcaatacaatattaattacttttttccaattataacattaattaataccactttcaccactcccaattcaatatattatac 54217392  T
Q  410 tttacatttatgata 424  Q
    ||| || ||||||||    
T  54217393 tttgcagttatgata 54217407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 1796359 - 1796282
Alignment:
Q  349 tttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagt 426  Q
    |||||||  |||||||||||||| | |||||||  |  | |||||||||||||||||||||||| |||||||||||||    
T  1796359 tttttcctgttataactctaatttatactactttcacaacttccaattcaatatattccactttgcatttatgatagt 1796282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 350
Target Start/End: Original strand, 8065489 - 8065538
Alignment:
Q  301 tcccaaaataattgagtcattccacttttcaatacagtattaattacttt 350  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  8065489 tcccaaaataaccgagtcattccacttttcaatacaatattaattacttt 8065538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 406
Target Start/End: Complemental strand, 29815259 - 29815157
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttcccttt--ataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    |||||||  |||||||| |||||||||||||| ||||| ||| |||||| |||||  |||||||||||||| | |||||  | || ||||||||||||||    
T  29815259 aaaataacggagtcatttcacttttcaatacaatatta-ttattttttttcctttttataactctaattaatattactttcaccacttccaattcaatat 29815161  T
Q  403 attc 406  Q
    ||||    
T  29815160 attc 29815157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 303 - 450
Target Start/End: Complemental strand, 14009797 - 14009650
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    |||||||||| |||  ||| ||||||||| |||  |||||||||  |||||| |||||||||| ||||||  | | | |  |||| |  |||||||||||    
T  14009797 ccaaaataatcgagatatttcacttttcagtactatattaattatatttttctctttataactttaattagtattgcgttcatcactctcaattcaatat 14009698  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||| || ||| ||||||| ||||| |||||| || |||||||||||||    
T  14009697 atttcattttgcatttataatagtggagaatacatcaatacttaacaa 14009650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 424
Target Start/End: Complemental strand, 36047257 - 36047142
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattactt-ttttccctttataactctaattaacactacttaaatcatttccaattcaatatattcca 408  Q
    |||||| ||||| |||||||||||||| |||||||||||| ||||||   ||||||  ||||||| | |||||  | || |  ||||||||||||||| |    
T  36047257 aattgactcatttcacttttcaatacaatattaattactttttttccaactataacattaattaatattactttcaccactctcaattcaatatattcta 36047158  T
Q  409 ctttacatttatgata 424  Q
    |||| |||||||||||    
T  36047157 ctttgcatttatgata 36047142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 38861395 - 38861328
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaat 370  Q
    ||||||||| ||||||||| ||||| ||||||||  |||||||| |||||||  ||||||||||||||    
T  38861395 ccaaaataaatgagtcatttcacttctcaatacatcattaattatttttttcagtttataactctaat 38861328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 420
Target Start/End: Complemental strand, 9052216 - 9052096
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattactttttt---ccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||||||| | ||| |||||||||||  | || |||||||||||||   ||  ||||||| |||||||| |||||||  ||||||   |||||||    
T  9052216 ccaaaataattgactaatttcacttttcaatggaatactaattactttttttttccaattataacactaattaatactactttcatcattctgaattcaa 9052117  T
Q  400 tatattccactttacatttat 420  Q
    ||||||| |||| ||||||||    
T  9052116 tatattctacttaacatttat 9052096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 450
Target Start/End: Complemental strand, 6506185 - 6506128
Alignment:
Q  393 aattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    |||||||  ||||||| ||| |||||||||||||||||||||||| |||| |||||||    
T  6506185 aattcaaagtattccattttgcatttatgatagtagagaatgcacaaatatttaacaa 6506128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 381
Target Start/End: Complemental strand, 22496819 - 22496762
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactactt 381  Q
    |||||| |||| | ||||||||| ||||| |||||||||||||||||||| |||||||    
T  22496819 actttttaatataatattaattattttttcccctttataactctaattaatactactt 22496762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 442
Target Start/End: Original strand, 28330733 - 28330877
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttc--cctttataactctaattaacactacttaaatcatttccaattc 397  Q
    |||||| || ||||||  |||| |||||||||||||| ||||||||||||||||   |  ||||||| |||||||| | |||||  | || | |||||||    
T  28330733 gtcccataaaaattgacccatttcacttttcaatacaatattaattactttttttttcaattataacactaattaatattactttcaccactcccaattc 28330832  T
Q  398 aatatattccactttacatttatgatagtagagaatgcaccaata 442  Q
    |||||| ||  |||| |||||||||||    ||||||||||||||    
T  28330833 aatataatctgctttgcatttatgataaagaagaatgcaccaata 28330877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 451
Target Start/End: Complemental strand, 29990580 - 29990487
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    |||||||| ||||||| |||| ||   ||| || ||||||||||||||| |||||| ||||||||||  | |||||||| |||||||| |||||    
T  29990580 ttataactttaattaatactatttttttcactttcaattcaatatattcaactttatatttatgatatgaaagaatgcatcaatacttgacaag 29990487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 427 - 468
Target Start/End: Original strand, 42367857 - 42367898
Alignment:
Q  427 agagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||| ||| ||||||||||||||||||||||||||||||    
T  42367857 agagaattcactaatacttaacaagtgcacttaaaactattt 42367898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 43421330 - 43421383
Alignment:
Q  389 ttccaattcaatatattccactttacatttatgatagtagagaatgcaccaata 442  Q
    ||||||||||||||||| || ||| ||||||||||||| ||||||| |||||||    
T  43421330 ttccaattcaatatatttcattttgcatttatgatagtggagaatgtaccaata 43421383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 442
Target Start/End: Complemental strand, 49218939 - 49218807
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattcaatatattcca 408  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||  |  |||||||  ||||||| | |||||  | || |  ||||||||||||||  |    
T  49218939 aattgactcatttcacttttcaatacaatattaattacttttttttcaattataacattaattaatattactttcaccactctcaattcaatatattata 49218840  T
Q  409 ctttacatttatgatagtagagaatgcaccaata 442  Q
    ||||  ||||||||||  ||||||||||||||||    
T  49218839 ctttgaatttatgata-aagagaatgcaccaata 49218807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 468
Target Start/End: Original strand, 21240934 - 21241002
Alignment:
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||| |||||| ||||||||||| | | ||||  |||||||||| ||||| ||||||||||||||||    
T  21240934 tatatttcactttgcatttatgataatggtgaattgaccaatacttgacaagagcacttaaaactattt 21241002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 473
Target Start/End: Complemental strand, 38615052 - 38614957
Alignment:
Q  377 tacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactatttatttt 473  Q
    ||||| ||||| | |||||||||||||||  | ||| |||||||||||  | | |||||||||||||||||||||  |||| |||||||||| ||||    
T  38615052 tactttaatcactcccaattcaatatattttattttgcatttatgataagaaaaaatgcaccaatacttaacaag-acactcaaaactatttttttt 38614957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 462
Target Start/End: Original strand, 40293686 - 40293790
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcact 457  Q
    ||||||||||||| || |||||||  ||||||  ||||| ||||  || ||||||||||| |||||| |   |||||||||||| ||| ||||| |||||    
T  40293686 ttataactctaataaatactacttttatcattctcaatttaatacttttcactttacattgatgataatgatgaatgcaccaatccttgacaagagcact 40293785  T
Q  458 taaaa 462  Q
    |||||    
T  40293786 taaaa 40293790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 468
Target Start/End: Complemental strand, 42670421 - 42670381
Alignment:
Q  428 gagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  42670421 gagaatgcaccaatacttaagaagtgcacttaagactattt 42670381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 468
Target Start/End: Original strand, 30568692 - 30568772
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtaga----gaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||| |||||| |||||||||||| |||    |||||||| ||||||||||||   |||||||||| ||||    
T  30568692 caattcaatatatttcactttgcatttatgatagcagagaatgaatgcactaatacttaacaataacacttaaaaccattt 30568772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 433
Target Start/End: Complemental strand, 3503198 - 3503088
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    |||||||||||||| ||||||||| ||||||||  | | |||| ||||||| |||| ||  ||||||   |||||||||||||| | ||| | |||||||    
T  3503198 cacttttcaatacaatattaattatttttttccaatcaaaactttaattaatactattttcatcattcataattcaatatattctattttgcttttatga 3503099  T
Q  423 tagtagagaat 433  Q
    || | ||||||    
T  3503098 taatggagaat 3503088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 381
Target Start/End: Complemental strand, 22129214 - 22129156
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactactt 381  Q
    |||||||||||||| |||||||||||||||     |||||||||||||||| |||||||    
T  22129214 cacttttcaatacaatattaattactttttcttaattataactctaattaatactactt 22129156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 353
Target Start/End: Original strand, 5291631 - 5291683
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattactttttt 353  Q
    ||||||||| ||||||  |||| |||||||||||||| ||||||||||||||||    
T  5291631 gtcccaaaa-aattgacccatttcacttttcaatacaatattaattactttttt 5291683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 42738498 - 42738433
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataact 365  Q
    |||| |||| |||||| ||||| |||||||||||||| |||||||||  |||||||  ||||||||    
T  42738498 gtcctaaaaaaattgactcatttcacttttcaatacaatattaattatctttttccaattataact 42738433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 47386101 - 47386149
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattactt 349  Q
    ||||||||| |||||| ||||| |||||||||||||| ||||||||||||    
T  47386101 gtcccaaaa-aattgattcatttcacttttcaatacaatattaattactt 47386149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 424
Target Start/End: Original strand, 3505755 - 3505787
Alignment:
Q  392 caattcaatatattccactttacatttatgata 424  Q
    ||||||||||||||| |||||||||||||||||    
T  3505755 caattcaatatattctactttacatttatgata 3505787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 424
Target Start/End: Complemental strand, 32949923 - 32949891
Alignment:
Q  392 caattcaatatattccactttacatttatgata 424  Q
    ||||||||||||||| |||||||||||||||||    
T  32949923 caattcaatatattctactttacatttatgata 32949891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 5e-60; HSPs: 79)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 44790589 - 44790420
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattact-tttttccctttataactctaattaacactacttaaatcatttccaattca 398  Q
    |||||||||||||| || |||| ||||||||||||||  |||||||||| ||||||||||||||||||||||||| |||||||  | |||| ||||||||    
T  44790589 gtcccaaaataattaagccatttcacttttcaatacatcattaattactatttttccctttataactctaattaatactactttcaccattcccaattca 44790490  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44790489 atatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactattt 44790420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 38252604 - 38252436
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| |||  |||| |||||||  ||||| ||||||||||||||||||||||||||||||||| || |||||||  ||||||||||||||||    
T  38252604 gtcccaaaataactgaaccatttcactttttgatacaatattaattacttttttccctttataactctaatcaatactactttcatcatttccaattcaa 38252505  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||    
T  38252504 tatattccactttacatttatgacagtggagaatgcactaatacttaacaagtgcacttaaaactattt 38252436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 315 - 468
Target Start/End: Complemental strand, 32967428 - 32967275
Alignment:
Q  315 agtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttac 414  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||  ||||||  ||||||||||||||||||||||     
T  32967428 agtcatttcacttttcaatacagtattagttactttttttcctttataactctaattaatactactttcatcattctcaattcaatatattccactttaa 32967329  T
Q  415 atttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||    
T  32967328 atttatgatagtggagaatggaccaatacttaagaagtgcacttaaaactattt 32967275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 5391993 - 5392158
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattactttt-ttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||  | || | ||||||||||||    
T  5391993 caaaataactgagtcatttcacttttcaatacaatattaattactttttttccctttataactctaattaatactactttcaacactcccaattcaatat 5392092  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||||  ||||||||||| ||||    
T  5392093 attccactttgcatttatgatagtggagaatgcaccaatacttgacaaaagcacttaaaaccattt 5392158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 2349295 - 2349459
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| | ||||||| ||| |||||||||| |||||||||| ||||| | ||||||||||||||||| | |||||  | ||||||||||||||||||    
T  2349295 caaaataacttagtcatttcacgtttcaatacaatattaattaccttttttcttttataactctaattaatattactttcaacatttccaattcaatata 2349394  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||    
T  2349395 ttccaatttacatttatgatagtggagaatgcacaaatacttaacaaatgcacttaaaactattt 2349459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 34133072 - 34133236
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||||||| |||||||||||||| ||||||||| | |||||| |||||||||| |||||| | |||||  ||||| ||||||||||||||    
T  34133072 caaaataactgagtcattacacttttcaatacaatattaattattattttccttttataactccaattaatattactttcatcatatccaattcaatata 34133171  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    || || ||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||    
T  34133172 tttcattttacatttatgatagtggagaatgcgccaatacttaacaagtgcacttaaaattattt 34133236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 300 - 462
Target Start/End: Complemental strand, 33191075 - 33190913
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||  |  | |||||||||||    
T  33191075 gtcccaaaataactgagtcatttcacttttcaatacaatattaattacttttttccctttataactctaattagtactactttcacaacttccaattcaa 33190976  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    ||||||||||| | ||||||||||||| |||||||||  |||||||||||||  |||||||||    
T  33190975 tatattccactatgcatttatgatagtggagaatgcattaatacttaacaagaacacttaaaa 33190913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 303 - 468
Target Start/End: Original strand, 29615742 - 29615907
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    ||||||||| ||| |||||  ||||||||||||| ||||||||| |||||||||||||||||| ||||||| |||||||  |||||| ||||||||||||    
T  29615742 ccaaaataactgaatcattttacttttcaatacaatattaattatttttttccctttataactttaattaatactactttcatcattcccaattcaatat 29615841  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||||||| ||| || | | ||||||||||||||||||||| |||||| |||||    
T  29615842 attccactttacatttatgacagtggaaagtacaccaatacttaacaagtgcatttaaaattattt 29615907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 308 - 468
Target Start/End: Complemental strand, 22325113 - 22324953
Alignment:
Q  308 ataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattcc 407  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||| ||||||||||||  |||| |||| ||  ||||||| ||||||||||||||||    
T  22325113 ataattgagtcatttcacttttcaatacaatattaattatttttttctctttataactctggttaaaactattttcatcattttcaattcaatatattcc 22325014  T
Q  408 actttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||| || ||||||| |||| ||||||||| ||||||||| |||||    
T  22325013 actttacatttatgatagtggaaaatgcactaatatttaacaagtacacttaaaattattt 22324953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 305 - 462
Target Start/End: Complemental strand, 32241585 - 32241428
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||  |  | |||||||||| |||||    
T  32241585 aaaataaatgagttatttcacttttcaatacaatattaattacttttttccctttataactctaattaatattactttcacaacttccaattcattatat 32241486  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    |||||||| |||||||||||||  |||||||| ||||||||||||||  |||||||||    
T  32241485 tccactttgcatttatgatagtgaagaatgcatcaatacttaacaagaacacttaaaa 32241428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 300 - 463
Target Start/End: Complemental strand, 5962640 - 5962476
Alignment:
Q  300 gtcccaaaataattgagtcattc-cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattca 398  Q
    |||| ||||||| |||||||||  |||||| ||||||| ||||||||||||||| |||||||||||||||||||| | || ||  |||| | ||||||||    
T  5962640 gtcctaaaataactgagtcattttcactttccaatacattattaattactttttcccctttataactctaattaatattaatttcatcactcccaattca 5962541  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaac 463  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||||||||  |||||||||||    
T  5962540 atatattccactttgcatttataatagtggagaatgcaccaatacttaacaaaagcacttaaaac 5962476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 39171484 - 39171652
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| |||||||||  ||||||||||| | |||||||||||||||||  ||||||||||||||||| |||| ||  |||| |  ||||||||    
T  39171484 gtcccaaaataactgagtcatttaacttttcaatataatattaattacttttttctttttataactctaattaatactattttcatcactcacaattcaa 39171583  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||||||||  | ||||||||| ||||    
T  39171584 tatattccactttgcatttatgatagtagataatgcatcaatacttaacaaaagtacttaaaaccattt 39171652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 12653632 - 12653796
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtatt-aattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    |||||||| | ||||||| |||||||||||||| |||| |||||||||| ||||||||||||||| ||||| | |||||  ||||||  |||||||||||    
T  12653632 caaaataactaagtcatttcacttttcaatacaatatttaattactttt-tccctttataactctgattaatattactttcatcattctcaattcaatat 12653730  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||||| ||||| || |||||||||||| |||||||  ||||||||||||||||    
T  12653731 attccactttacatttataatagtggataatgcaccaatatttaacaaacgcacttaaaactattt 12653796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 42412549 - 42412381
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||| || ||| ||||| ||||||| ||| || ||||||||||||||||||  ||||| |||||||||| |||||||  |||| | |||||||||    
T  42412549 gtcccaaaaaaactgactcatttcactttttaatgcaatattaattacttttttccaattatagctctaattaatactactttcatcactcccaattcaa 42412450  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||| ||||||||||| | |||||||||||||||  | ||||| ||||||||||||||||    
T  42412449 tatattccactttgcatttatgataatggagaatgcaccaatatatgacaagagcacttaaaactattt 42412381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 2195409 - 2195576
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||| ||||||  |||| ||||||||||||||  | |||||||||||||||  |||||||||||||||| |||||||  |||| | |||||||||    
T  2195409 gtcccaaaaaaattgacccatttcacttttcaatacaacaataattacttttttccaattataactctaattaatactactttcatcactcccaattcaa 2195508  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||| ||||| |||||||||||  | |||||||||||||||||||||||  |||| ||||||||||    
T  2195509 tatattctactttgcatttatgataagaaagaatgcaccaatacttaacaag-acactcaaaactattt 2195576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 28802712 - 28802876
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| | || |||| ||||||||||||||  ||||| ||||||||||||||||||||||||||||| | || ||  |||| |  ||||||||||||    
T  28802712 caaaataagtcagccatttcacttttcaatacatcattaactacttttttccctttataactctaattaataatattttcatcactctcaattcaatata 28802811  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||| ||||||||||||| ||||||  | |||||||||||||| ||||||||||| ||||    
T  28802812 ttccactttgcatttatgatagtggagaatagatcaatacttaacaagagcacttaaaaccattt 28802876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 303 - 470
Target Start/End: Complemental strand, 42558744 - 42558577
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    ||||||||| ||||||||| ||||||||||||||  |||||||| |||||||  |||| |||||||||||| |||||||  |||| |   ||||||||||    
T  42558744 ccaaaataagtgagtcatttcacttttcaatacatcattaattatttttttctttttacaactctaattaatactactttcatcactcttaattcaatat 42558645  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactatttat 470  Q
    |||||||||| ||||||||||||| ||||||  ||||||||||||||||  || ||||||| ||||||    
T  42558644 attccactttgcatttatgatagtggagaataaaccaatacttaacaagaacaattaaaaccatttat 42558577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 300 - 463
Target Start/End: Original strand, 21587217 - 21587381
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttcc-ctttataactctaattaacactacttaaatcatttccaattca 398  Q
    |||||||||||  |||| |||| ||||||||||| || |||||||||||||||| | ||||||||| || || || |||||||  |||| | ||||||||    
T  21587217 gtcccaaaatatctgagccatttcacttttcaatgcaatattaattactttttttctctttataacgctgatcaatactactttcatcactcccaattca 21587316  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaac 463  Q
    |||||||||||||| ||||| | | ||| |||||||||||||||||||||||| |||||||||||    
T  21587317 atatattccactttgcatttctaacagtggagaatgcaccaatacttaacaagagcacttaaaac 21587381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 424
Target Start/End: Complemental strand, 34287242 - 34287121
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    ||||||||| ||||||||| ||||||||||||||  |||||| |||||||| ||||||||| ||||||||| | |||||  |||||||| ||||||||||    
T  34287242 ccaaaataactgagtcatttcacttttcaatacaacattaatcactttttttcctttataattctaattaatattactttcatcatttctaattcaatat 34287143  T
Q  403 attccactttacatttatgata 424  Q
    ||||||||||||||||| ||||    
T  34287142 attccactttacatttacgata 34287121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 305 - 450
Target Start/End: Complemental strand, 44615526 - 44615381
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||||||||| |||||| ||||||| ||||||||||||||  |||||||||||||||||||| | || ||  |||| |  |||||||||||||    
T  44615526 aaaataactgagtcatttcactttccaatacaatattaattacttttccccctttataactctaattaatattattttcatcactctcaattcaatatat 44615427  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    || ||||| ||||||| ||||| |||||| ||||||||||||||||    
T  44615426 tctactttgcatttataatagtggagaattcaccaatacttaacaa 44615381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 305 - 468
Target Start/End: Original strand, 45425429 - 45425594
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttt--tttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    ||||||||||||||||| || |||||||||   ||||||||  |||  |||  |||||||||||||||||| | |||||  |||||| | |||| |||||    
T  45425429 aaaataattgagtcatttcatttttcaatatgatattaatttatttattttttctttataactctaattaatattactttcatcattcctaatttaatat 45425528  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||| ||||    
T  45425529 attccactttgcatttatgatagtggaaaatgcatcaatacttaacaagagcacttaaaaccattt 45425594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 13085117 - 13084946
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttc---caatt 396  Q
    ||||||||| |||||| ||||| |||||||||||||| |||||||||| |||||||   |||||||||||||||   || ||  |||| | |   || ||    
T  13085117 gtcccaaaaaaattgattcatttcacttttcaatacaatattaattacctttttccaaatataactctaattaatgttattttcatcactcctcccagtt 13085018  T
Q  397 caatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    | |||||||||||||| |||||||||| |||||||||||||||||| ||||||||  |||||||||||||||    
T  13085017 cgatatattccactttgcatttatgattgtagagaatgcaccaataattaacaagaacacttaaaactattt 13084946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 31132673 - 31132833
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattcaata 401  Q
    |||||||||  |||||||| || ||||||||||| |||||||||||||||| ||| |||||||||||||||| |||||||  |  | || ||||| | ||    
T  31132673 ccaaaataacggagtcatttcatttttcaatacaatattaattactttttttcctcttataactctaattaatactactttcacaactttcaattgatta 31132772  T
Q  402 tattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    ||||||| ||| ||||||||||| | ||||||  |||||||||||||||| ||||||||||    
T  31132773 tattccattttgcatttatgatactggagaatataccaatacttaacaagagcacttaaaa 31132833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 300 - 475
Target Start/End: Complemental strand, 10729087 - 10728914
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||| ||||||  |||| |||||||||||  |  | ||||||| |||||||  || ||||||||||||| ||||||| ||||| | |||||||||    
T  10729087 gtcccaaaa-aattgacccatttcacttttcaattaaacaataattacatttttccaattgtaactctaattaatactactttaatcactcccaattcaa 10728989  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactatttatttttc 475  Q
    ||||||||||||| |||||||||||  | ||||||||| |||||||||||||  |||| |||||||||| ||||||    
T  10728988 tatattccactttgcatttatgataagaaagaatgcacaaatacttaacaag-acactcaaaactatttttttttc 10728914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 305 - 464
Target Start/End: Complemental strand, 31410769 - 31410610
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||||||||| |||||| ||||||| ||||||||||||||| || | ||||||| ||||||| |||||||  || | |   ||||||||||||    
T  31410769 aaaataactgagtcatttcactttccaatacaatattaattactttttcccttctataactttaattaatactactttcattactcttaattcaatatat 31410670  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaact 464  Q
    |||||||| |||||||||||||  | |||||||||||| |||||||   |||||||||||    
T  31410669 tccactttgcatttatgatagtgtataatgcaccaatatttaacaaaaacacttaaaact 31410610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 300 - 442
Target Start/End: Original strand, 14689901 - 14690043
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||| || ||||||  |||| |||||||||||||| ||||||||||||||||||  ||||||| |||||||| |||||||  | || | |||||||||    
T  14689901 gtcccagaaaaattgacccatttcacttttcaatacaatattaattacttttttccaattataacactaattaatactactttcaccactcccaattcaa 14690000  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaata 442  Q
    ||||||| ||||| |||||||||||  | ||||||||||||||    
T  14690001 tatattctactttgcatttatgataaaaaagaatgcaccaata 14690043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 325 - 468
Target Start/End: Complemental strand, 33746359 - 33746217
Alignment:
Q  325 cttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    ||||| || ||| ||||||||| |||||||| ||||||||| ||||||| |||| ||  |||||||  |||||||||||||||  |||| |||||| |||    
T  33746359 ctttttaaaacaatattaattatttttttcc-tttataactataattaatactattttcatcatttttaattcaatatattcctttttatatttatcata 33746261  T
Q  425 gtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    || |||| ||||| ||||||||| |||||||||||||| |||||    
T  33746260 gtggagattgcactaatacttaataagtgcacttaaaattattt 33746217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 361 - 461
Target Start/End: Original strand, 7042754 - 7042855
Alignment:
Q  361 taactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatactt-aacaagtgcactta 459  Q
    ||||| ||||||| |||| ||  |||| ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||    
T  7042754 taactttaattaatactattttcatcacttccaattttatatattccactttacatttatgataatagagaatgcaccaatacttaaacaagagcactta 7042853  T
Q  460 aa 461  Q
    ||    
T  7042854 aa 7042855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 329 - 420
Target Start/End: Complemental strand, 33925221 - 33925130
Alignment:
Q  329 tcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttat 420  Q
    |||||||| |||||||||||||||||| ||||||||||||||||| |||||||  |  | || ||||||||||||||||||||| |||||||    
T  33925221 tcaatacaatattaattacttttttccttttataactctaattaatactactttcacaactttcaattcaatatattccactttgcatttat 33925130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 310 - 424
Target Start/End: Complemental strand, 886604 - 886490
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccac 409  Q
    |||||| ||||| |||||||||||||| |||||||||||||||| |  ||||||| |||||||| | |||||  ||||||  |||||| |||||||| ||    
T  886604 aattgactcatttcacttttcaatacaatattaattactttttttcaattataacactaattaatattacttttatcattctcaattcgatatattctac 886505  T
Q  410 tttacatttatgata 424  Q
    ||| |||||||||||    
T  886504 tttgcatttatgata 886490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 418
Target Start/End: Original strand, 9014545 - 9014659
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| |||||||||  |||||| |||||| | |||||||||||||||| ||||||| ||| ||||| |||||||  ||||||  ||||||||||||    
T  9014545 caaaataactgagtcattttactttttaatacaattttaattacttttttccttttataattcttattaatactactttcatcattcacaattcaatata 9014644  T
Q  404 ttccactttacattt 418  Q
    || |||||| |||||    
T  9014645 ttacactttgcattt 9014659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 468
Target Start/End: Original strand, 28791267 - 28791417
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||| ||  ||||||||||||| |||  |||||||||||||||| |||||||  |  | | |||||||||||||||| | ||||||||    
T  28791267 catttcacttttcaatgcaacattaattacttttctccaattataactctaattaatactactttcacaactcccaattcaatatattctagtttacatt 28791366  T
Q  418 tatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||    ||||||||||||||||| | ||  ||||| ||||||||||    
T  28791367 tatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactattt 28791417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 300 - 418
Target Start/End: Complemental strand, 32231886 - 32231768
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||| |||||| ||||| |||||||||||||| ||||||||||||||||||  ||||||| |||||||| | |||||  | || | |||||||||    
T  32231886 gtcccaaaaaaattgactcatttcacttttcaatacaatattaattacttttttccaattataacactaattaataatactttcaccactcccaattcaa 32231787  T
Q  400 tatattccactttacattt 418  Q
    ||||||  ||||| |||||    
T  32231786 tatattttactttgcattt 32231768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 317 - 466
Target Start/End: Original strand, 41726479 - 41726628
Alignment:
Q  317 tcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacat 416  Q
    ||||| |||||||||||||| |||||||||||||||| |  |||||||| ||||||| |||| ||  |  | | |||||||||||||||| |||||||||    
T  41726479 tcatttcacttttcaatacaatattaattactttttttcaattataactgtaattaatactaatttcacaactcccaattcaatatattctactttacat 41726578  T
Q  417 ttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactat 466  Q
    ||||||||    |||||||| |||||||| | ||  ||||| ||||||||    
T  41726579 ttatgataaagaagaatgcaacaatacttgaaaaaggcactcaaaactat 41726628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 2119657 - 2119825
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| ||||  ||| ||| |||||||||| ||||||||| | |||| |||||||||||||||||||   || ||  |  | ||| ||||||     
T  2119657 gtcccaaaataactgagctatttcacatttcaatacaatattaattattatttttcctttataactctaattaatcttattttcacaacttctaattcag 2119756  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||||||||| |  |||||| |||||||  ||||| |  ||||||||| |||||    
T  2119757 tatattccactttacatttatgataatgaagaatgtaccaatatataacaggaacacttaaaattattt 2119825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 468
Target Start/End: Complemental strand, 4274460 - 4274297
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| | ||||||| | ||||||||||||  ||||||||||||||| | ||||||||||||||||| | || ||  | || |  |||||||||||||    
T  4274460 aaaataagtaagtcatttcgcttttcaatacatcattaattactttttttcatttataactctaattaatattattttcaccactctcaattcaatatat 4274361  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    | |||||| ||||||||||||  ||||||  ||| ||| ||||| |  |||||||||| |||||    
T  4274360 ttcactttgcatttatgataggggagaatagaccgatatttaacgaaagcacttaaaattattt 4274297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 312 - 424
Target Start/End: Original strand, 2796992 - 2797105
Alignment:
Q  312 ttgagtcattccacttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattcaatatattccact 410  Q
    |||| ||||| |||||||||||||| ||||||||| |||||| ||  |||||||||||||||| | |||||  || | | |||||||||||||||| |||    
T  2796992 ttgactcatttcacttttcaatacaatattaattatttttttaccaattataactctaattaatattactttcattactcccaattcaatatattctact 2797091  T
Q  411 ttacatttatgata 424  Q
    || |||||||||||    
T  2797092 ttgcatttatgata 2797105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 323 - 468
Target Start/End: Complemental strand, 7258509 - 7258365
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    ||||||| ||| || |||||||| |||||| ||  |||||||||||||||| |||||||  |||| | |||||||||||||||| | ||| |||||||||    
T  7258509 cactttttaatgcaatattaattccttttt-ccaattataactctaattaatactactttcatcactcccaattcaatatattctagtttgcatttatga 7258411  T
Q  423 tagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    || |    ||||||||||||||| ||||| || |||||||| ||||    
T  7258410 taatgataaatgcaccaatacttgacaagagcgcttaaaaccattt 7258365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 424
Target Start/End: Complemental strand, 14748849 - 14748748
Alignment:
Q  324 acttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    ||||||||||||| |||||||||||||||| ||  ||||||| |||||||| |||||||  | ||||  ||||||||||||||| ||||| |||||||||    
T  14748849 acttttcaatacaatattaattactttttttccaattataacactaattaatactactttcaccattctcaattcaatatattctactttgcatttatga 14748750  T
Q  423 ta 424  Q
    ||    
T  14748749 ta 14748748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 463
Target Start/End: Complemental strand, 29730975 - 29730899
Alignment:
Q  389 ttccaattcaatatat--tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaac 463  Q
    ||||||||||||||||  || ||||| ||||||||||||| ||||||||||||||||||||||||  ||||||||||    
T  29730975 ttccaattcaatatatattctactttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaac 29730899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 463
Target Start/End: Original strand, 8618092 - 8618232
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    |||||| ||||||  |||||||||||||| |||  |||||||| ||||||| |||| ||  | || |||||||||||||||||  | |||||||||||||    
T  8618092 cactttccaatactatattaattacttttatccaattataactttaattaatactatttttaccacttccaattcaatatattatattttacatttatga 8618191  T
Q  423 tagtagagaatgcaccaatacttaacaagtgcacttaaaac 463  Q
    ||    | ||||||||||||||||||||   ||||||||||    
T  8618192 taaagaataatgcaccaatacttaacaaaaacacttaaaac 8618232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 450
Target Start/End: Original strand, 45197570 - 45197702
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| |||||||||||||| |||||||||||||| |    ||||| |||||||||| | || ||  |||| |  |||||||||||||| || ||||||||    
T  45197570 catttcacttttcaatacaatattaattacttttattaaattatagctctaattaatagtaatttcatcactctcaattcaatatatttcattttacatt 45197669  T
Q  418 tatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||||| |||  |||||||| |||||||||||||    
T  45197670 tatgacagtgaagaatgcatcaatacttaacaa 45197702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 424
Target Start/End: Complemental strand, 8418461 - 8418344
Alignment:
Q  310 aattgagtcattccacttttcaataca---gtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattc 406  Q
    |||||| ||||| |||||||||||| |   |||||||||| |||||| |  |||||||||||||||| |||||||  |||| |  ||||||| |||||||    
T  8418461 aattgactcatttcacttttcaatataatagtattaattattttttttcaattataactctaattaatactactttcatcactctcaattcagtatattc 8418362  T
Q  407 cactttacatttatgata 424  Q
     |||||||||||||||||    
T  8418361 tactttacatttatgata 8418344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 424
Target Start/End: Original strand, 33826181 - 33826296
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||||||| | ||| |||||||||||||| ||||||||    |||| |  ||||||||||||| || |||||||  ||||||  |||||||||||||    
T  33826181 aaaataattgacttatttcacttttcaatacaatattaatt----tttttcaattataactctaatcaatactactttcatcattctcaattcaatatat 33826276  T
Q  405 tccactttacatttatgata 424  Q
    ||  ||||||||||||||||    
T  33826277 tctgctttacatttatgata 33826296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 451
Target Start/End: Original strand, 138974 - 139114
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||||||  |||||||| |||||||||||||| ||||||||| |||||           |||||||||| |||| ||  || | |  |||||||     
T  138974 gtcccaaaataaccgagtcatttcacttttcaatacaatattaattatttttt-----------ctctaattaatactaatttcattactcacaattcat 139062  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    ||||||||||||| ||||||||||||  || |||||||||||||||||||||    
T  139063 tatattccactttgcatttatgatagcggaaaatgcaccaatacttaacaag 139114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 462
Target Start/End: Original strand, 9014745 - 9014806
Alignment:
Q  401 atattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||||||  ||||||||||    
T  9014745 atattccactttgcatttatgatagtggagaatgcatcaatacttaacaaaagcacttaaaa 9014806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 14117415 - 14117548
Alignment:
Q  312 ttgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactt 411  Q
    |||| ||||| ||||||||||||||  |||||||  |||||| |  |||||||||||||||| | |||||  |  | || ||||||||||||||| ||||    
T  14117415 ttgactcatttcacttttcaatacaacattaatttttttttttcaattataactctaattaatattactttcacaactttcaattcaatatattcaactt 14117514  T
Q  412 tacatttatgatagtagagaatgcaccaatactt 445  Q
    |||||||||||||    ||||| |||||||||||    
T  14117515 tacatttatgataaagaagaatacaccaatactt 14117548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 348 - 440
Target Start/End: Original strand, 22490380 - 22490472
Alignment:
Q  348 ttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaa 440  Q
    |||||||| ||||||||||||||||| || |||   ||||||  |||||||||||||||||||||  ||||||||||||  ||||| ||||||    
T  22490380 ttttttccatttataactctaattaatacaactatcatcattctcaattcaatatattccactttgtatttatgatagtgaagaatccaccaa 22490472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 15559280 - 15559134
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccct--ttataactctaattaacactacttaaatcatttccaattcaatatattccactttaca 415  Q
    |||| ||||||||||  || |||||||||||| |||  ||  |||||||||||||||| || ||||  |||| | | |||||||||||||| ||||| ||    
T  15559280 catttcacttttcaacgcaatattaattacttatttttctgattataactctaattaataccactttcatcactcctaattcaatatattctactttgca 15559181  T
Q  416 tttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    ||||||||| | |  ||| ||||||||||| |||||  |||||||||    
T  15559180 tttatgataatggtaaatacaccaatacttgacaagaacacttaaaa 15559134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 381
Target Start/End: Complemental strand, 36012120 - 36012057
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactactt 381  Q
    |||| |||||||||||||| ||||||||| ||||||||  |||||||||||||||| |||||||    
T  36012120 catttcacttttcaatacaatattaattatttttttccacttataactctaattaatactactt 36012057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 424
Target Start/End: Complemental strand, 43845050 - 43844925
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattactt--ttttccctttataactctaattaacactacttaaatcatttccaattc 397  Q
    |||||| || |||||| ||||  |||||||||||||| ||||||||||||  ||||||  ||||||||||||||||  |||||| || ||  |||||||     
T  43845050 gtcccataaaaattgactcatatcacttttcaatacaatattaattacttttttttccaattataactctaattaattctactttaa-caactccaatta 43844952  T
Q  398 aatatattccactttacatttatgata 424  Q
    | ||||||  |||||||||||||||||    
T  43844951 attatattttactttacatttatgata 43844925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 381
Target Start/End: Complemental strand, 45421088 - 45421025
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactactt 381  Q
    |||| |||||||||||||| ||||||||||||||||||  ||||||| |||||||| |||||||    
T  45421088 catttcacttttcaatacaatattaattacttttttccaattataacactaattaatactactt 45421025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 384 - 450
Target Start/End: Complemental strand, 138781 - 138715
Alignment:
Q  384 atcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    |||||| | |||||||||||||||||||| |||||||||||| ||| ||| ||||||||| ||||||    
T  138781 atcattactaattcaatatattccactttgcatttatgatagaagaaaatccaccaatacataacaa 138715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 27868453 - 27868367
Alignment:
Q  338 tattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    |||||||||||||||| |  |||||| | ||||||| |||||||  ||||||  ||||||||||||||| ||||| |||||||||||    
T  27868453 tattaattactttttttcaattataattttaattaatactactttcatcattctcaattcaatatattctactttgcatttatgata 27868367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 451
Target Start/End: Original strand, 3384496 - 3384626
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacacta---cttaaatcatttccaattcaatatattccactttacattta 419  Q
    ||||||| |||||| |||||||||||||||||  || |||||| ||||||| | ||   |||  |||| || ||||||||||||||| ||||| ||||||    
T  3384496 cactttttaatacaatattaattacttttttcaatt-ataactttaattaataatattactttcatcactttcaattcaatatattcaactttgcattta 3384594  T
Q  420 tgatagtagagaatgcaccaatacttaacaag 451  Q
    |||||||  |||||  |||||||| |||||||    
T  3384595 tgatagtgaagaatataccaatacataacaag 3384626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 445
Target Start/End: Original strand, 39416273 - 39416396
Alignment:
Q  323 cacttttcaatacagtattaattacttttttc--cctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttat 420  Q
    |||||||||||||| ||| | ||||||||||   |  |||||||||||||||| | || ||  |||| || |||||||| |||||||| ||| |||||||    
T  39416273 cacttttcaatacaatatcagttactttttttttcaattataactctaattaatattagttttatcactttcaattcaa-atattccaatttgcatttat 39416371  T
Q  421 gatagtagagaatgcaccaatactt 445  Q
    |||| |||||||||||| |||||||    
T  39416372 gatattagagaatgcacaaatactt 39416396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 468
Target Start/End: Complemental strand, 12958051 - 12957979
Alignment:
Q  396 tcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||||  |||||||||||| |||||||||| ||||  ||| ||| ||||||||||| ||||    
T  12958051 tcaatatattccactttgtatttatgatagttgagaatgcactaatagataataagagcacttaaaaccattt 12957979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 424
Target Start/End: Complemental strand, 38201544 - 38201433
Alignment:
Q  312 ttgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactt 411  Q
    |||| ||||| |||||||||||||| || |||||| |||||||  ||||||||||||||||| | |||||  || | | ||||||||||||| || | ||    
T  38201544 ttgactcatttcacttttcaatacaataataattatttttttca-tttataactctaattaatattactttcattactcccaattcaatatactctaatt 38201446  T
Q  412 tacatttatgata 424  Q
    | |||||||||||    
T  38201445 tgcatttatgata 38201433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 445
Target Start/End: Original strand, 32678994 - 32679121
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||||||  ||||||||| ||||| |  |||||||||||||||| |||||||  |  | |  ||||| ||||||||  ||||||||||    
T  32678994 catttcacttttcaatacaacattaattaccttttttcaattataactctaattaatactacttttacaactctcaatttaatatattttactttacatt 32679093  T
Q  418 tatgatagtagagaatgcaccaatactt 445  Q
    |||||||    | |||||||||||||||    
T  32679094 tatgataaagaataatgcaccaatactt 32679121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 339 - 450
Target Start/End: Complemental strand, 40077877 - 40077766
Alignment:
Q  339 attaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcacc 438  Q
    ||||||||||||||| |  ||||||||| |||||| | |||||  |  | | | |||||||||||||| |||||||||||||||||    ||||||||||    
T  40077877 attaattactttttttcaattataactcaaattaatattactttcacaactccaaattcaatatattctactttacatttatgataaagaagaatgcacc 40077778  T
Q  439 aatacttaacaa 450  Q
    ||||||| ||||    
T  40077777 aatacttgacaa 40077766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 450
Target Start/End: Complemental strand, 325190 - 325132
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    |||||||||||||||||||||| ||||||||||   | |||||||||||||||| ||||    
T  325190 caattcaatatattccactttatatttatgataacggtgaatgcaccaatacttgacaa 325132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 29638260 - 29638366
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||||||  ||||||||| ||||  |  |||||||||||||||| | |||||  | || | | |||||||||||||  ||||||||||    
T  29638260 catttcacttttcaatacaacattaattaccttttctcaattataactctaattaatattactttcaccactcctaattcaatatattatactttacatt 29638359  T
Q  418 tatgata 424  Q
    |||||||    
T  29638360 tatgata 29638366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 450
Target Start/End: Complemental strand, 37219899 - 37219780
Alignment:
Q  329 tcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtag 428  Q
    |||||||| ||||||||| ||||| |  |||||||||||| |||| | |||||  |  | || ||||| |||||||| ||||||| ||||||||||   |    
T  37219899 tcaatacaatattaattattttttac--tttataactctagttaataatactttcacaactttcaatttaatatatttcactttatatttatgataaggg 37219802  T
Q  429 agaatgcaccaatacttaacaa 450  Q
    |||||||||| |||||||||||    
T  37219801 agaatgcacccatacttaacaa 37219780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 37459309 - 37459415
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||| |||||| |||||||||||||||||   ||||||  |||||| | |||||||  | || | |||||| ||||||||| ||||| ||||    
T  37459309 catttcactttttaatacaatattaattacttttttctaattataatactaattgatactactttcaccactcccaatttaatatattcaactttgcatt 37459408  T
Q  418 tatgata 424  Q
    |||||||    
T  37459409 tatgata 37459415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 323 - 424
Target Start/End: Complemental strand, 2875229 - 2875128
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    |||||||||||||| ||| ||||| ||||| ||  |||||||||||||||| |||||||  ||   |   |||||||||||||| ||||| |||||||||    
T  2875229 cacttttcaatacaatatgaattattttttaccaattataactctaattaatactactttcattcctctaaattcaatatattctactttgcatttatga 2875130  T
Q  423 ta 424  Q
    ||    
T  2875129 ta 2875128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 34133022 - 34133071
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattactt 349  Q
    |||||||||||| ||||||||| ||||||| |||||| ||||||||||||    
T  34133022 gtcccaaaataactgagtcattacactttttaatacaatattaattactt 34133071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 42797830 - 42797773
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactact 380  Q
    |||||||||||||| ||||||||| |||||| |  |||||||||||||||| ||||||    
T  42797830 cacttttcaatacaatattaattattttttttcaattataactctaattaaaactact 42797773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 424
Target Start/End: Original strand, 3442449 - 3442548
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgat 423  Q
    |||||||||| || ||||||||| |||||||  || |||||||||||||| |||| ||  ||||||| ||||||||||| || || ||||  ||||||||    
T  3442449 acttttcaattcaatattaattatttttttcaatt-ataactctaattaatactattttcatcattttcaattcaatatctttcaatttatgtttatgat 3442547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 373
Target Start/End: Complemental strand, 4480596 - 4480536
Alignment:
Q  314 gagtcattccacttttcaatacagtattaatt-acttttttccctttataactctaattaa 373  Q
    |||||||| || ||||||||||| |||||||| | |||||| |||||||||||||||||||    
T  4480596 gagtcatttcatttttcaatacaatattaattaattttttttcctttataactctaattaa 4480536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 424
Target Start/End: Original strand, 11637106 - 11637205
Alignment:
Q  326 ttttcaatacagtattaattact-tttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    ||||||||||| ||||||||||| |||||     ||||||| ||||||| |||||||  | || |  ||||||||||||||| |||||||||||||||||    
T  11637106 ttttcaatacaatattaattactctttttttaaatataactataattaatactactttcaccactctcaattcaatatattctactttacatttatgata 11637205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 352
Target Start/End: Complemental strand, 29731029 - 29730982
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttt 352  Q
    ||||||| ||||||||| |||||||||||||| ||||||||| |||||    
T  29731029 aaaataactgagtcatttcacttttcaatacaatattaattatttttt 29730982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 1230436 - 1230383
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtagagaatgcaccaatactta 446  Q
    ||||||||||||||| ||||| ||||||||||| | || ||||||||||||||||    
T  1230436 caattcaatatattctactttgcatttatgataatgga-aatgcaccaatactta 1230383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 373
Target Start/End: Complemental strand, 12958325 - 12958275
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    ||||||| |||||| |||||||||||||||||   ||||||||||||||||    
T  12958325 cactttttaatacaatattaattacttttttctaattataactctaattaa 12958275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 8566554 - 8566493
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactac 379  Q
    |||| |||||||||||||| ||||||||| |||||| |  ||||||| |||||||| |||||    
T  8566554 catttcacttttcaatacaatattaattattttttttcaattataacactaattaatactac 8566493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 424
Target Start/End: Complemental strand, 5878300 - 5878268
Alignment:
Q  392 caattcaatatattccactttacatttatgata 424  Q
    ||||||||||||||| |||||||||||||||||    
T  5878300 caattcaatatattctactttacatttatgata 5878268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 424
Target Start/End: Original strand, 17005947 - 17006010
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    ||||||||||||||||   |||||  |||| | |||||||||||||||| ||||| |||||||||||    
T  17005947 ttataactctaattaa---tactttcatcactcccaattcaatatattctactttgcatttatgata 17006010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 424
Target Start/End: Complemental strand, 17571301 - 17571238
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    ||||||||||||||||   |||||  |||| | |||||||||||||||| ||||| |||||||||||    
T  17571301 ttataactctaattaa---tactttcatcactcccaattcaatatattctactttgcatttatgata 17571238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 353
Target Start/End: Complemental strand, 26570320 - 26570272
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattactttttt 353  Q
    ||||||| ||| ||||| |||||||||||||| ||||||||||| ||||    
T  26570320 aaaataactgattcatttcacttttcaatacaatattaattactatttt 26570272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 424
Target Start/End: Original strand, 39998196 - 39998228
Alignment:
Q  392 caattcaatatattccactttacatttatgata 424  Q
    ||||||||||||||| |||||||||||||||||    
T  39998196 caattcaatatattctactttacatttatgata 39998228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 2e-59; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 15081364 - 15081532
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| |||   ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||    
T  15081364 gtcccaaaataactgaacaatttcacttttcaatacaatattaattacttttttccctttataactctaattaatactactttcataatttccaattcaa 15081463  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  15081464 tatattccactttacgtttatgatagtggagaatgcacaaatacttaacaagtgcacttaaaactattt 15081532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 31265725 - 31265888
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| | ||||||| |||||||||||||| ||||||||| |||||||| ||||||||||||||||| | |||||  |  | |||||||||||||||    
T  31265725 caaaataacttagtcatttcacttttcaatacaatattaattatttttttcc-tttataactctaattaatattactttcacaacttccaattcaatata 31265823  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  31265824 ttccactttacatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaactattt 31265888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 307 - 468
Target Start/End: Complemental strand, 7301239 - 7301078
Alignment:
Q  307 aataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattc 406  Q
    |||||| |||||||| |||||||||||||| ||||||||| |||||||||||||||||||||| ||| | |||||  ||||||| |||||||||||||||    
T  7301239 aataatagagtcatttcacttttcaatacaatattaattatttttttccctttataactctaactaatattactttcatcattttcaattcaatatattc 7301140  T
Q  407 cactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||||| | |||||||||| ||||||||||||   |||||||||||||||    
T  7301139 cactttacatttatgataatggagaatgcacaaatacttaacaaacacacttaaaactattt 7301078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 3604766 - 3604598
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||| ||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| | |||||  |  | |||||||||||    
T  3604766 gtcctaaaataactgagtcatttcacttttcaatacaatattaattatttttttccctttataactctaattaatattactttcacaacttccaattcaa 3604667  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||| ||||||  ||| | |||||||||||||||||||||||| | ||||||||| ||||    
T  3604666 tatattccactttgcatttacaataatggagaatgcaccaatacttaacaagagaacttaaaaccattt 3604598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 300 - 464
Target Start/End: Complemental strand, 30064115 - 30063951
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||| ||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| | |||||  |||| | |||||||||    
T  30064115 gtcctaaaataactgagtcatttcactttccaatacaatattaattacttttttccctttataactctaattaatattactttcatcactcccaattcaa 30064016  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaact 464  Q
    ||||||||||||| ||||||| ||||| |||||| ||| ||||||||| ||  ||||||||||||    
T  30064015 tatattccactttgcatttataatagtggagaatacacaaatacttaataaaagcacttaaaact 30063951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 318 - 468
Target Start/End: Complemental strand, 9755294 - 9755145
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| |||||||||||||| |||||||||||||||||| ||||||||| ||||||| | || ||  ||||||| ||||||||||||||| ||| ||||||    
T  9755294 catttcacttttcaatacaatattaattacttttttcc-tttataactgtaattaatattattttcatcattttcaattcaatatattctactctacatt 9755196  T
Q  418 tatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||| ||||||| |||||||||||||| ||| ||||||||||||||    
T  9755195 tatgatagtggagaatgtaccaatacttaacacgtgaacttaaaactattt 9755145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 300 - 466
Target Start/End: Original strand, 4238363 - 4238528
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| |||||||||||||||||  |  |||||||||| ||||||||| ||||||| |||||||||| ||||||| ||||||| |    |||| |||||||    
T  4238363 gtcctaaaataattgagtcattttatctttcaatacaatattaattatttttttctctttataactttaattaatactacttcacaactttc-aattcaa 4238461  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactat 466  Q
    || ||| ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  4238462 tagatttcactttacatttatgatagtgaagaatgcaccaatacttaacaagagcacttaaaactat 4238528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 303 - 468
Target Start/End: Original strand, 33109317 - 33109482
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    |||||| || |||| ||||  ||||||||||||| || |||||| |||||||| ||||||||||||||||| |||||||  ||||||  |||||||||||    
T  33109317 ccaaaacaactgagccattttacttttcaatacaatactaattatttttttccatttataactctaattaatactactttcatcattctcaattcaatat 33109416  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||| || |||||||| | |||||| |||||||||| |||| |||||||||||| ||||||||||||    
T  33109417 atttcattttacattaacgatagtggagaatgcacaaatatttaacaagtgcatttaaaactattt 33109482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 324 - 450
Target Start/End: Original strand, 2657866 - 2657992
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgat 423  Q
    |||||||||||||  |||||||||||||||||   ||||| ||||||||| | |||||  |||| ||||||||||||||||| ||||||||||| ||| |    
T  2657866 acttttcaatacaaaattaattacttttttccaaatataattctaattaatattactttcatcacttccaattcaatatatttcactttacattaatggt 2657965  T
Q  424 agtagagaatgcaccaatacttaacaa 450  Q
    | |||||||  ||||||||||||||||    
T  2657966 actagagaagacaccaatacttaacaa 2657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 300 - 450
Target Start/End: Complemental strand, 33921635 - 33921485
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||| || ||||||  |||| |||||| ||| ||| ||||||||||||||||||  |||||||||||||||| |||||||  |  | | |||||||||    
T  33921635 gtcccagaaaaattgacccatttcactttccaaaacaatattaattacttttttccaattataactctaattaatactacttttacaactcccaattcaa 33921536  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||||||| |||||||||||||||||    |||||| |||||||||||||||    
T  33921535 tatattctactttacatttatgataaagaagaatggaccaatacttaacaa 33921485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 304 - 448
Target Start/End: Complemental strand, 34915964 - 34915831
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||||||| |||||||||||| | ||||||||  ||||||||||||||||||  |||||  | ||||     |||    |||||||||||    
T  34915964 caaaataactgagtcatttcacttttcaataaaatattaattttttttttccctttataact--aattataagtact-----cat----aattcaatata 34915876  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaac 448  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||    
T  34915875 ttccactttgcatttatgataatggagaatgcaccaatacttaac 34915831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 450
Target Start/End: Complemental strand, 33018071 - 33017960
Alignment:
Q  339 attaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcacc 438  Q
    |||||||  ||||||||  |||||||||||||||| |||||||  | || | |||||||||||||||| |||||||||||||||||    ||||||||||    
T  33018071 attaattttttttttccaattataactctaattaatactactttcaccactcccaattcaatatattctactttacatttatgataaagaagaatgcacc 33017972  T
Q  439 aatacttaacaa 450  Q
    ||||||| ||||    
T  33017971 aatacttgacaa 33017960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 326 - 424
Target Start/End: Complemental strand, 3166248 - 3166150
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    |||||||||||  |||||||||||||||||  |||||||||||||||| |||||||  | || | |  ||||||||||||| |||||||||||||||||    
T  3166248 ttttcaatacaacattaattacttttttccaattataactctaattaatactactttcaccaatcctcattcaatatattctactttacatttatgata 3166150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 450
Target Start/End: Complemental strand, 7739680 - 7739534
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttt-tccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    ||||||||| | |||||  | ||||||||||||||||||||  ||||| |   |||| |||||||||||| |||||||  ||||||  |||||||||||     
T  7739680 aaaataattaattcattttatttttcaatacagtattaatttttttttatatatttacaactctaattaatactacttttatcattctcaattcaatatc 7739581  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||| ||||||||||||| ||| | | ||||||| |||||||||||||    
T  7739580 ttctactttacatttataataatggtgaatgcatcaatacttaacaa 7739534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 423
Target Start/End: Original strand, 26356232 - 26356333
Alignment:
Q  321 tccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttat 420  Q
    ||||||||||||| || ||||||||||||||| | | |||||||| ||||||| |||||||  |||| ||| ||||||||||||| |||||| |||||||    
T  26356232 tccacttttcaatgcaatattaattacttttt-ctcattataactttaattaatactactttcatcacttctaattcaatatatttcactttgcatttat 26356330  T
Q  421 gat 423  Q
    |||    
T  26356331 gat 26356333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 468
Target Start/End: Complemental strand, 14312722 - 14312646
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||| ||| |||||||||||||||||| | |||||||||||||||||||||||   |||||||||| ||||    
T  14312722 caattcaatacatttcactttacatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccattt 14312646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 424
Target Start/End: Complemental strand, 2310431 - 2310330
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    |||||||||||||| |||||||||||||||| |  |||||||  ||||||| |||||||  |||| | |||||||||||||||  || || |||||||||    
T  2310431 cacttttcaatacaatattaattactttttttcaattataacattaattaatactactttcatcactcccaattcaatatattataccttgcatttatga 2310332  T
Q  423 ta 424  Q
    ||    
T  2310331 ta 2310330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 447
Target Start/End: Complemental strand, 8232458 - 8232330
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||||||  |||||||||||||||||  |||||| ||||||||| | |||||  |  | |  ||||||||||||||  ||||||||||    
T  8232458 catttcacttttcaatacaacattaattacttttttccaattataattctaattaatagtactttcacaagtctcaattcaatatatt-tactttacatt 8232360  T
Q  418 tatgatagtagagaatgcaccaatacttaa 447  Q
    |||||||    |||||||||||||||||||    
T  8232359 tatgataaagaagaatgcaccaatacttaa 8232330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 468
Target Start/End: Complemental strand, 14306368 - 14306239
Alignment:
Q  339 attaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcacc 438  Q
    ||||||||||||||| |   ||||||||||||||| | ||  |  |||| |  ||||| |||| ||| |||||||||||||||||| | |||||||||||    
T  14306368 attaattactttttttcaaatataactctaattaataatatgttcatcactctcaatttaatacatttcactttacatttatgataatggagaatgcacc 14306269  T
Q  439 aatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||   |||||||||| ||||    
T  14306268 aatacttaacaaaaacacttaaaaccattt 14306239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 424
Target Start/End: Complemental strand, 15321380 - 15321267
Alignment:
Q  311 attgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccact 410  Q
    ||||| ||||| ||| ||||||||   |||||||||||||||||   ||||||| |||||||| |||||||  | ||||  ||||||||||||||| |||    
T  15321380 attgattcatttcacgtttcaatattatattaattacttttttctaattataacactaattaatactactttcaacattctcaattcaatatattctact 15321281  T
Q  411 ttacatttatgata 424  Q
    || |||||||||||    
T  15321280 ttgcatttatgata 15321267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 424
Target Start/End: Complemental strand, 15372006 - 15371905
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    ||||||||||||   |||| |||||||||||||  ||||||| |||||||| |||||||  | || | |||||||||||||||| ||||| |||||||||    
T  15372006 cacttttcaatattatatttattacttttttccaattataacactaattaatactactttcaccactcccaattcaatatattctactttgcatttatga 15371907  T
Q  423 ta 424  Q
    ||    
T  15371906 ta 15371905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 468
Target Start/End: Original strand, 31723458 - 31723603
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    |||||||||||||| |||||||||||||||| |  |||||| | ||||||| | || ||  || |||  ||||||||||||||||| |||| ||||||||    
T  31723458 cacttttcaatacaatattaattactttttttcaattataattataattaatattattttcattattctcaattcaatatattccaatttatatttatga 31723557  T
Q  423 tagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |  || ||||||||  ||||||| | ||   |||||||||||||||    
T  31723558 tgataaagaatgcattaatacttgataaaaacacttaaaactattt 31723603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 468
Target Start/End: Original strand, 117087 - 117188
Alignment:
Q  367 taattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactat 466  Q
    ||||||| |||||||  |||| |  |||||||||||||||||||||  |||||||||  | ||||||||||||||  |||||||| |  |||||||| ||    
T  117087 taattaatactactttcatcactctcaattcaatatattccactttgtatttatgatcatggagaatgcaccaatttttaacaagagtccttaaaaccat 117186  T
Q  467 tt 468  Q
    ||    
T  117187 tt 117188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 317 - 406
Target Start/End: Original strand, 6787253 - 6787342
Alignment:
Q  317 tcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattc 406  Q
    ||||| ||||||||||| || ||||||||| |||||||    ||||||||||||||| |||||||  |||| || ||||| |||||||||    
T  6787253 tcatttcacttttcaatgcaatattaattatttttttctaaatataactctaattaaaactactttcatcactttcaattaaatatattc 6787342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 450
Target Start/End: Complemental strand, 3874189 - 3874066
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    |||||||||||| |||||||||||||||||  ||||| || |||| || | |||||  |  | | | |||||||||||||| |||||||||||||||||     
T  3874189 ttttcaatacagcattaattacttttttccaattatatctataat-aatattactttcactactcctaattcaatatattcaactttacatttatgataa 3874091  T
Q  426 tagagaatgcaccaatacttaacaa 450  Q
       | ||||||||||||||| ||||    
T  3874090 agaataatgcaccaatacttgacaa 3874066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 353
Target Start/End: Original strand, 4552853 - 4552896
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattactttttt 353  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||    
T  4552853 aattgactcatttcacttttcaatacaatattaattactttttt 4552896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 355
Target Start/End: Original strand, 34703561 - 34703616
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttcc 355  Q
    |||| ||||||  ||| ||||| |||||||||||||||||||||| ||||||||||    
T  34703561 gtcctaaaatatctgactcatttcacttttcaatacagtattaatcacttttttcc 34703616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 381
Target Start/End: Complemental strand, 34803850 - 34803792
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactactt 381  Q
    |||||||||||||| ||| |||||||||||| |  |||||||| ||||||| |||||||    
T  34803850 cacttttcaatacaatatcaattactttttttcaattataactataattaatactactt 34803792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 424
Target Start/End: Complemental strand, 723639 - 723599
Alignment:
Q  384 atcatttccaattcaatatattccactttacatttatgata 424  Q
    |||||||||||| ||||||  ||||||||||||||||||||    
T  723639 atcatttccaatgcaatatcatccactttacatttatgata 723599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 5568312 - 5568264
Alignment:
Q  389 ttccaattcaatatattccactttacatttatgatagtagagaatgcac 437  Q
    |||||||||||||| || ||||||| |||||||||| ||||||| ||||    
T  5568312 ttccaattcaatatttttcactttatatttatgataatagagaaggcac 5568264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 418
Target Start/End: Original strand, 34441851 - 34441950
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||||||  ||||||||||||||| |  |||||||| ||||||| |||||||  |||| |   |||| ||||||||| | ||||||||    
T  34441851 catttcacttttcaatacaacattaattactttttt-caattataactttaattaatactactttcatcactcttaatttaatatattctaatttacatt 34441949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 3e-58; HSPs: 82)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 303 - 468
Target Start/End: Complemental strand, 28108539 - 28108373
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattactttttt-ccctttataactctaattaacactacttaaatcatttccaattcaata 401  Q
    ||||||||| |||| |||||||||||||||||||  ||||||||||||||| |||||||||||||||||||| |||||||  ||||||  ||||||||||    
T  28108539 ccaaaataactgagccattccacttttcaatacaacattaattactttttttccctttataactctaattaatactactttcatcattctcaattcaata 28108440  T
Q  402 tattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28108439 tattccactttacatgtatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactattt 28108373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 304 - 468
Target Start/End: Complemental strand, 28926010 - 28925846
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    ||||||||||||| |||| || ||||||||||| |||||||||||||||||||||||||||||||||||| |||  ||  |||||| |||||||||||||    
T  28926010 caaaataattgagccatttcatttttcaatacaatattaattacttttttccctttataactctaattaatactgttttgatcattcccaattcaatata 28925911  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    || ||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  28925910 tttcactttacaattatgatagtggagaatgcatcaatacttaacaagtgcacttaaaactattt 28925846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 323 - 468
Target Start/End: Complemental strand, 30757711 - 30757566
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    |||||||||||||| |||||||||||||||| | ||||||||||||||||| |||||||  |||||| |||||||||||||||||| |||||||||||||    
T  30757711 cacttttcaatacaatattaattactttttttcttttataactctaattaatactactttcatcattcccaattcaatatattccaatttacatttatga 30757612  T
Q  423 tagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||| || ||||||  ||||||||||||||||||||||||||||||    
T  30757611 tagtggaaaatgcattaatacttaacaagtgcacttaaaactattt 30757566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 304 - 462
Target Start/End: Original strand, 3100345 - 3100503
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||  |  | |||||||| ||||||    
T  3100345 caaaataactgagtcatttcacttttcaatacaatattaattacttttttccctttgtaactctaattaatactactttcacaacttccaatttaatata 3100444  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||||  |||||||||    
T  3100445 ttccactttgcatttatgatagtggagaatgcagcaatacttaacaagatcacttaaaa 3100503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 43077891 - 43077724
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||||||  |||||||| |||||||||||||| ||||||||| |||||||| ||||||||||||||||| | |||||  ||||||| ||||||||    
T  43077891 gtcccaaaataacggagtcatttcacttttcaatacaatattaatta-ttttttccttttataactctaattaatattactttcatcattttcaattcaa 43077793  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||| |||||||||||||||| ||| || |||||||||||| ||||||||| || ||||||||||||    
T  43077792 tatatttcactttacatttatgacagtggaaaatgcaccaatagttaacaagtacatttaaaactattt 43077724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 305 - 462
Target Start/End: Complemental strand, 7650136 - 7649979
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||| ||||| ||||||| |||||| |||||||||||||||||| ||||||||||||||||| ||||  |  ||||||| |||||||||||||    
T  7650136 aaaataactgaatcatttcacttttaaatacaatattaattacttttttccttttataactctaattaatactatcttcatcattttcaattcaatatat 7650037  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    |||||||| ||||||||||||| ||||||||| || ||||||||||| ||||||||||    
T  7650036 tccactttgcatttatgatagtggagaatgcatcagtacttaacaagagcacttaaaa 7649979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 5212124 - 5211956
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||| ||||| ||| |||||||||||||| |||||||||||||||| ||||||||| | ||||||| |||||||  |  | || ||||||||    
T  5212124 gtcctaaaataactgagttatttcacttttcaatacaatattaattactttttttcctttataaatttaattaatactactttcacaactttcaattcaa 5212025  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||| ||||||||||||| || ||||||| ||||||||||||| ||||||||||||||||    
T  5212024 tatattccactttgcatttatgatagttgataatgcacaaatacttaacaagagcacttaaaactattt 5211956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 41436024 - 41436188
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||||| || ||||||||||||||||| |||||||  ||||||  ||||||||||||    
T  41436024 caaaataactgagtcatttcacttttcaatacaatattaattactttttcccttttataactctaattaatactactttcatcattctcaattcaatata 41436123  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||| |||||||||||||  ||||| || |||||||||||||   ||||||||| |||||    
T  41436124 ttccactttgcatttatgatagtgaagaatacatcaatacttaacaaaaacacttaaaattattt 41436188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 300 - 462
Target Start/End: Original strand, 28572152 - 28572311
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||||||| |   |||||||||| ||||||| |||||||  |  | |||||||||||    
T  28572152 gtcccaaaataactgagtcatttcacttttcaatacaatattaattactttct---ctttataactgtaattaatactactttcacaacttccaattcaa 28572248  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    |||||| || ||| ||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  28572249 tatatttcattttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaa 28572311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 306 - 468
Target Start/End: Complemental strand, 24775968 - 24775806
Alignment:
Q  306 aaataattgagtcattccacttttcaatacagt-attaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    |||||||||||||||  |||||||||||| | | |||||| | |||||||| ||||||||||| ||||| |||||||  |||||||  ||||||||||||    
T  24775968 aaataattgagtcatatcacttttcaatataattattaatcatttttttcc-tttataactctgattaatactactttcatcatttttaattcaatatat 24775870  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    | |||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||    
T  24775869 ttcactttacatttatgatagtggagaatacaccaatacttaacaagtgcacttaaaattattt 24775806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 301 - 468
Target Start/End: Complemental strand, 37248049 - 37247882
Alignment:
Q  301 tcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaat 400  Q
    ||||||||||| |||||| || ||||||||||||||   ||||||| |||||||||||||||||||||||||| | |||||  ||||    |||||||||    
T  37248049 tcccaaaataagtgagtcgtttcacttttcaatacatatttaattaattttttccctttataactctaattaatattactttcatcacactcaattcaat 37247950  T
Q  401 atattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||| |||||| ||||||||||||| ||||||  |||||||||||||||| ||||||||||||||||    
T  37247949 atatttcactttgcatttatgatagtggagaatagaccaatacttaacaagagcacttaaaactattt 37247882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 308 - 468
Target Start/End: Complemental strand, 15859500 - 15859343
Alignment:
Q  308 ataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattcc 407  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||  |  | ||| ||||||||||||| |    
T  15859500 ataattgagtcatttcacttttcaatacaatattaattacttttttccctttataactctaattaacattactttcacaacttctaattcaatatatttc 15859401  T
Q  408 actttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||| |||||   || || |||||||| ||||||||||||||  | ||||||||||||||    
T  15859400 actttgcattt---attgtggagaatgccccaatacttaacaaaagtacttaaaactattt 15859343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 305 - 475
Target Start/End: Original strand, 28526910 - 28527080
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||| ||||| |||||||||||| | ||||||||||||||||| |||||||||| ||||||| | |||||  |  | |||||||||||||||     
T  28526910 aaaataactgaatcatttcacttttcaatataatattaattacttttttctctttataactataattaatattactttcacaacttccaattcaatatag 28527009  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactatttatttttc 475  Q
    |||||||||||| |||| ||||  ||||||||| ||||||||||||| ||||||||||| |||| ||||||    
T  28527010 tccactttacatatatggtagtgaagaatgcacgaatacttaacaagagcacttaaaaccatttttttttc 28527080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 323 - 468
Target Start/End: Complemental strand, 435227 - 435076
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataac------tctaattaacactacttaaatcatttccaattcaatatattccactttacat 416  Q
    |||||||||||||| ||||||||| || ||||||||||||||      | ||||||| |||||||  ||||||  |||||||||||||| ||||||||||    
T  435227 cacttttcaatacaatattaattatttctttccctttataacaataactttaattaatactactttcatcattctcaattcaatatatttcactttacat 435128  T
Q  417 ttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||||||||    
T  435127 ttatgatagtggagaatgcactaatatttaacaagtgcacttaaaactattt 435076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 305 - 468
Target Start/End: Original strand, 28301384 - 28301543
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||||||||| ||||||| |||| | ||||||||    |||||| ||||||||||||||||| |||||||  |||| |  |||||||||||||    
T  28301384 aaaataaatgagtcatttcactttttaatatattattaatt----ttttccttttataactctaattaatactactttcatcactctcaattcaatatat 28301479  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    | |||||| ||||||||||||| ||||||  |||||||||||||||| ||||||||||| ||||    
T  28301480 ttcactttgcatttatgatagtggagaatagaccaatacttaacaagagcacttaaaaccattt 28301543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 304 - 451
Target Start/End: Complemental strand, 44534649 - 44534498
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttt----tccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||||    | | ||||||||||||||||| |||| ||  |    |||||||||||    
T  44534649 caaaataactgagtcatttcacttttcaatacaatattaattactttttctttttcttttataactctaattaatactaatttcacagcttccaattcaa 44534550  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  44534549 tatattccactttgcatttatgatagtggagaatgtaccaatacttaacaag 44534498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 18181380 - 18181211
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattca 398  Q
    |||| ||||||| |||  |||| |||||||||||||| ||||||||| |||||| |   |||||||||||||||| |||||||  || ||| ||||||||    
T  18181380 gtcctaaaataactgacccatttcacttttcaatacaatattaattattttttttctaattataactctaattaatactactttcattattcccaattca 18181281  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    | |||||| ||||| ||||||||||||| |||||||||||||||| ||||||  ||||||||||| ||||    
T  18181280 aaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccattt 18181211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 304 - 451
Target Start/End: Original strand, 10818565 - 10818713
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattactttttt-ccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    |||||||| ||||||||| || |||| |||| | |||||||||||||||| |||||||||||||||||||| |  ||||  |||| | | |||||||||     
T  10818565 caaaataactgagtcatttcattttttaatataatattaattactttttttccctttataactctaattaatatcactttcatcactcctaattcaatac 10818664  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    ||| |||||| ||||||||||| ||||||||||||||||||||||||||    
T  10818665 atttcactttgcatttatgatactagagaatgcaccaatacttaacaag 10818713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 300 - 442
Target Start/End: Original strand, 7213416 - 7213558
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||||| | ||||| |||||||||||||| ||||||||||||||| || ||||||||||||||||| |||||||  |  | |  ||||||||    
T  7213416 gtcccaaaataattaaatcatttcacttttcaatacaatattaattactttttcccttttataactctaattaatactactttcacaactctcaattcaa 7213515  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaata 442  Q
    ||||||||||||||||||||| |||    ||||||||||||||    
T  7213516 tatattccactttacatttataataaagaagaatgcaccaata 7213558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 9724822 - 9724964
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||| ||||||| |||| |||||||||||||| ||||||||||||||||  |||||||||||||||||| |||||||  | |    |||||||||    
T  9724822 gtcccaaaaaaattgagccatttcacttttcaatacaatattaattactttttt-tctttataactctaattaatactactttcacc--ccccaattcaa 9724918  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatactt 445  Q
    ||||||| |||||||||||||||||    |||||||||||||||||    
T  9724919 tatattctactttacatttatgataaagaagaatgcaccaatactt 9724964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 326 - 451
Target Start/End: Original strand, 8031708 - 8031833
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    ||||||||||| |||||||||||||||  ||||||||||| ||||||| |||||||  ||||||  ||||||||||||||  ||||| |||||||||||     
T  8031708 ttttcaatacaatattaattactttttctcctttataactttaattaatactacttttatcattcacaattcaatatatttaactttgcatttatgataa 8031807  T
Q  426 tagagaatgcaccaatacttaacaag 451  Q
    | |||||| || ||||||||||||||    
T  8031808 tggagaatacatcaatacttaacaag 8031833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 465
Target Start/End: Original strand, 23684925 - 23685065
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgat 423  Q
    ||||||||||||| ||||||||| |||| |   ||||||||||||||||| |||||||  |||| |  |||||||||||||| |||||| ||||||||||    
T  23684925 acttttcaatacattattaattatttttcttt-tttataactctaattaatactactttcatcactctcaattcaatatatttcactttgcatttatgat 23685023  T
Q  424 agtagagaatgcaccaatacttaacaagtgcacttaaaacta 465  Q
    ||| |||||||||| ||||||||||||   ||||||||||||    
T  23685024 agtggagaatgcactaatacttaacaaaaacacttaaaacta 23685065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 348 - 470
Target Start/End: Complemental strand, 13375308 - 13375184
Alignment:
Q  348 ttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattc-cactttacatttatgatagtagagaatgcaccaata-ctt 445  Q
    |||||| ||||||||||||||||||| | || ||  ||||||  ||||||||||||||  |||||||||||||||||||| ||||||||||||||| |||    
T  13375308 tttttttcctttataactctaattaatattattttcatcattctcaattcaatatattttcactttacatttatgatagtggagaatgcaccaatacctt 13375209  T
Q  446 aacaagtgcacttaaaactatttat 470  Q
    ||||| ||||||||||| |||||||    
T  13375208 aacaactgcacttaaaattatttat 13375184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 381
Target Start/End: Original strand, 33751402 - 33751483
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactactt 381  Q
    |||| ||||||| ||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||    
T  33751402 gtccaaaaataaatgagtcatttcacttttcaatacatcattaattacttttttccctttataactctaattaatactactt 33751483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 306 - 415
Target Start/End: Original strand, 33880106 - 33880214
Alignment:
Q  306 aaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatatt 405  Q
    |||||||||||||||| ||||||| |||||| |||||||||| ||||||||||||||||||||||||| | |||||  | || | |||||||||||||||    
T  33880106 aaataattgagtcatttcactttttaatacaatattaattac-tttttccctttataactctaattaatattactttcaccactcccaattcaatatatt 33880204  T
Q  406 ccactttaca 415  Q
    | ||||||||    
T  33880205 ctactttaca 33880214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 336 - 462
Target Start/End: Original strand, 2881962 - 2882088
Alignment:
Q  336 agtattaattacttttttccctttataactctaattaacactacttaaa-tcatttccaattcaatatattccactttacatttatgatagtagagaatg 434  Q
    ||||||||||| ||||||||||||||||||| ||| || |||| ||  | || | || ||| ||||||||| |||||| ||||||||||||| |||||||    
T  2881962 agtattaattatttttttccctttataactcaaatgaatactattttcactcctctc-aatacaatatatttcactttgcatttatgatagtggagaatg 2882060  T
Q  435 caccaatacttaacaagtgcacttaaaa 462  Q
    ||||||||||||||||| ||||||||||    
T  2882061 caccaatacttaacaagagcacttaaaa 2882088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 468
Target Start/End: Original strand, 4794529 - 4794682
Alignment:
Q  318 cattccacttttcaatacagtattaattactttttt---ccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttac 414  Q
    |||| |||||||||||||| ||||||||| ||||||   ||  |||||||||||||||| |||||||  |||| || ||||||||||||||||||||| |    
T  4794529 catttcacttttcaatacaatattaattaatttttttctccaattataactctaattaatactactttcatcactttcaattcaatatattccactttgc 4794628  T
Q  415 atttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||| || | |||||| ||||| || |||||  |||| |||| |||||    
T  4794629 atttatgataataaaaaatgcatcaatatttgacaagaacactcaaaattattt 4794682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 3123588 - 3123755
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa---t 400  Q
    |||||||| ||||||||| |||||| ||||||| ||||||||| | |||| ||||||||||||||||||| | || ||  |||| |  ||||||||   |    
T  3123588 caaaataactgagtcatttcactttccaatacaatattaattattatttttcctttataactctaattaatattattttcatcactcacaattcaatact 3123687  T
Q  401 atattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||| |||  ||||||||||||  |||||||||||||||||||  |  |||||||||| |||||    
T  3123688 atattccattttgtatttatgatagtgaagaatgcaccaatacttaatgaaagcacttaaaattattt 3123755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 405
Target Start/End: Complemental strand, 42881439 - 42881338
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||| ||||| |||||||||||||| |||||||||||||||||| |||| ||||||| |||| ||||||   |||| |||||||||||||||    
T  42881439 caaaataactgaatcatttcacttttcaatacaatattaattacttttttccttttacaactctacttaatactactctcatcacttccaattcaatata 42881340  T
Q  404 tt 405  Q
    ||    
T  42881339 tt 42881338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 358 - 462
Target Start/End: Original strand, 2756673 - 2756777
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcact 457  Q
    |||||||||||||||| |||| ||| |||| |||||||| ||||||||| ||||||||||||||||| | |  ||||||| ||||||| ||||| |||||    
T  2756673 ttataactctaattaatactatttacatcacttccaatttaatatattctactttacatttatgataatggtaaatgcactaatacttgacaagagcact 2756772  T
Q  458 taaaa 462  Q
    |||||    
T  2756773 taaaa 2756777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 326 - 442
Target Start/End: Original strand, 31348478 - 31348594
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    ||||||||||| ||||||||||||||||||  ||||||| |||||||| |||||||  | |||| | |||||||||||||| ||| | |||||||||||     
T  31348478 ttttcaatacaatattaattacttttttccaattataacactaattaatactactttcaccattcctaattcaatatattctactatgcatttatgataa 31348577  T
Q  426 tagagaatgcaccaata 442  Q
     | ||||||||||||||    
T  31348578 aaaagaatgcaccaata 31348594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 481
Target Start/End: Original strand, 14136711 - 14136885
Alignment:
Q  306 aaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatatt 405  Q
    |||||| ||| ||||  |||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| | | | |  ||||| |||||||     
T  14136711 aaataactgactcatgtcacttttcaatacaatattaattacttttttccaattataactctaattaacactacttcact-actctcaatttaatatatc 14136809  T
Q  406 ccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactatttatttttcctctct 481  Q
    |||||||  |||||| ||||| || ||||||  ||||  |||||||  |||||||||  |||| ||||||| ||||    
T  14136810 ccacttttgatttataatagtggaaaatgcaaaaatatgtaacaagaacacttaaaatcatttttttttcccctct 14136885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 317 - 463
Target Start/End: Complemental strand, 31546167 - 31546021
Alignment:
Q  317 tcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacat 416  Q
    ||||| ||||||| |||||| |||||||||||||||| |  ||||||||||||| || |||||||  |||| |   || | ||||||||||||||| |||    
T  31546167 tcatttcacttttaaatacaatattaattactttttttcaattataactctaatcaatactactttcatcactcttaactaaatatattccactttgcat 31546068  T
Q  417 ttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaac 463  Q
    || ||||||| |||| |||| ||||| ||||||||  ||||||||||    
T  31546067 ttgtgatagtggagagtgcatcaatatttaacaagatcacttaaaac 31546021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 300 - 398
Target Start/End: Original strand, 40964994 - 40965091
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattca 398  Q
    |||||||||||| ||||| |||  | ||||||||||| |||||||||||||||||||||||||||||||||||| | |||||  ||||||| |||||||    
T  40964994 gtcccaaaataactgagttattt-atttttcaatacaatattaattacttttttccctttataactctaattaatattactttcatcattttcaattca 40965091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 424
Target Start/End: Complemental strand, 37529214 - 37529113
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    |||||| ||||||| |||||||||||||||| |  |||||||||||||||| | |||||  | || |||||||||||| ||||| |||||||||||||||    
T  37529214 cactttccaatacaatattaattactttttttcaattataactctaattaatattactttcaccacttccaattcaatttattctactttacatttatga 37529115  T
Q  423 ta 424  Q
    ||    
T  37529114 ta 37529113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 445
Target Start/End: Complemental strand, 1908634 - 1908515
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    |||||||||||  ||||||||||||||| |  |||||||||||||||| | || ||  | || |||||||||||||||||| |||||||||||||||||     
T  1908634 ttttcaatacaacattaattactttttttcaattataactctaattaatattattttcaccacttccaattcaatatattctactttacatttatgataa 1908535  T
Q  426 tagagaatgcaccaatactt 445  Q
       ||||||||| |||||||    
T  1908534 agaagaatgcactaatactt 1908515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 481
Target Start/End: Complemental strand, 7931644 - 7931481
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||||||  ||||||||||||||| |  |||||||||||||||| |||||||  |  | |  ||||||||||||||  ||||||||||    
T  7931644 catttcacttttcaatacaacattaattactttttttcaattataactctaattaatactactttcacaactctcaattcaatatattttactttacatt 7931545  T
Q  418 tatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactatttatttttcctctct 481  Q
    |||||||    ||||||||| ||||||| | ||   |||| |||||||||| ||||| ||||||    
T  7931544 tatgataaagaagaatgcactaatacttgaaaaagacactcaaaactattttttttttctctct 7931481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 445
Target Start/End: Original strand, 24356070 - 24356197
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||||||  ||||||||||||||| |  |||||||||||||||| |||||||  |  | | ||||||||| |||||| ||||||||||    
T  24356070 catttcacttttcaatacaacattaattactttttttcaattataactctaattaatactactttcacgactcccaattcaacatattctactttacatt 24356169  T
Q  418 tatgatagtagagaatgcaccaatactt 445  Q
    |||||||    |||||||| ||||||||    
T  24356170 tatgataaagaagaatgcatcaatactt 24356197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 300 - 451
Target Start/End: Original strand, 31592492 - 31592642
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||| |||||| ||||| |||||||||||||| || ||||||| |||||||  |||||||| ||||||| | || ||  |||| |  ||||||||    
T  31592492 gtcccaaaaaaattgactcatttcacttttcaatacaataataattac-tttttccaattataactttaattaatattattttcatcactctcaattcaa 31592590  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    ||||||| |||||  ||||||||||  | |||||||| |||||||| |||||    
T  31592591 tatattctactttgtatttatgataagaaagaatgcagcaatacttgacaag 31592642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 424
Target Start/End: Original strand, 3199838 - 3199963
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccct-----ttataactctaattaacactacttaaatcatttccaattca 398  Q
    ||||| |||||| ||||| |||||||||||||| ||||||||||||||||  ||     |||||||||||||||| |||||||  | || | ||||||||    
T  3199838 caaaaaaattgactcattgcacttttcaatacaatattaattacttttttttcttctaattataactctaattaatactactttcaccactcccaattca 3199937  T
Q  399 atatattccactttacatttatgata 424  Q
    |||||||  ||||| |||||||||||    
T  3199938 atatattatactttgcatttatgata 3199963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 326 - 463
Target Start/End: Complemental strand, 8550781 - 8550645
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    ||||||||| ||||||||||||||||||   || |||||| ||||||| |||||||  |||| |   |||||||||||||  ||||| |||||||||||     
T  8550781 ttttcaatatagtattaattactttttttaatt-ataactataattaatactactttcatcactcttaattcaatatattagactttgcatttatgataa 8550683  T
Q  426 tagagaatgcaccaatacttaacaagtgcacttaaaac 463  Q
    | |||||||||| ||||||| |||||  ||||||||||    
T  8550682 tggagaatgcacaaatacttgacaagaacacttaaaac 8550645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 305 - 451
Target Start/End: Original strand, 44194598 - 44194738
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||| ||||| |||||||||||||| ||||||||| |||||||| ||||||||||||||| | || | ||  |||| |  ||   ||||||||    
T  44194598 aaaataactgaatcatttcacttttcaatacaatattaatta-ttttttccttttataactctaatttataccaatttcatcact--ca---caatatat 44194691  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    |||||||| ||||||||||||  ||||||||||| || |||||||||    
T  44194692 tccactttgcatttatgataggcgagaatgcaccgatgcttaacaag 44194738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 358 - 451
Target Start/End: Complemental strand, 44424371 - 44424278
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    |||||||||||||||| |||||||  ||||||  ||||||||||||||| ||||| ||||||||||| || | |||||| |||||||| |||||    
T  44424371 ttataactctaattaatactactttcatcattctcaattcaatatattcaactttgcatttatgataataaaaaatgcatcaatacttgacaag 44424278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 450
Target Start/End: Complemental strand, 10069733 - 10069601
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||| || |||||||||||||||| |  | |||||||||||||| | |||||  |||| |  ||||||||||||||| ||||| ||||    
T  10069733 catttcacttttcaatgcaatattaattacttttttacaatgataactctaattaataatactttcatcactctcaattcaatatattcgactttgcatt 10069634  T
Q  418 tatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||||||| | |  ||||||| ||||||| ||||    
T  10069633 tatgataatggtaaatgcacaaatacttgacaa 10069601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 326 - 445
Target Start/End: Original strand, 39095599 - 39095717
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    |||| |||||| |||||||||||||||||  || |||||| ||||||| | |||||  |||| |  ||||||||||||||||||||| |||||||||||     
T  39095599 ttttaaatacaatattaattacttttttcaatt-ataactttaattaatattactttcatcactgacaattcaatatattccactttgcatttatgataa 39095697  T
Q  426 tagagaatgcaccaatactt 445  Q
    | ||||||| | ||||||||    
T  39095698 tggagaatgtatcaatactt 39095717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 13222027 - 13222133
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| |||||||||||||| ||||||||| |||||| |  ||||||| |||||||| | |||||  | || |||||||||||||||||  ||||| ||||    
T  13222027 catttcacttttcaatacaatattaattattttttttcaattataacactaattaatattactttcaccacttccaattcaatatattttactttgcatt 13222126  T
Q  418 tatgata 424  Q
    |||||||    
T  13222127 tatgata 13222133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 479
Target Start/End: Complemental strand, 33602375 - 33602214
Alignment:
Q  323 cacttttcaatacagtattaattact---tttttccctttataactctaattaacactacttaaatcatttccaattcaa---tatattccactttacat 416  Q
    |||||||||||||| ||||||||| |   ||||||   ||||||||||||||||   |||||  |||| |  ||||||||   ||||||||||||| |||    
T  33602375 cacttttcaatacaatattaattattatttttttctaattataactctaattaatgttactttcatcactctcaattcaatattatattccactttgcat 33602276  T
Q  417 ttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactatttatttttcctct 479  Q
    ||||||| ||  ||||||||| ||||| ||||||| ||||||||||| |||| ||||||||||    
T  33602275 ttatgatggtgaagaatgcactaatacataacaagagcacttaaaaccattt-tttttcctct 33602214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 565135 - 565192
Alignment:
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||  |||||||||    
T  565135 tccactttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaa 565192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 406
Target Start/End: Original strand, 5425815 - 5425904
Alignment:
Q  317 tcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattc 406  Q
    ||||| |||||||||||||| ||||||| ||||||||||  |||||| ||||| ||| |||| ||  |||||| ||||||||||||||||    
T  5425815 tcatttcacttttcaatacaatattaataacttttttccaattataaatctaactaatactaatttcatcattcccaattcaatatattc 5425904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 427
Target Start/End: Complemental strand, 7648993 - 7648905
Alignment:
Q  338 tattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagta 427  Q
    ||||||||||||||| |||||||||| ||||||||| |||| ||  |||| | ||||||||||||||| ||| ||||||||||| |||||    
T  7648993 tattaattacttttt-ccctttataattctaattaatactattttcatcactcccaattcaatatatttcacattacatttatgttagta 7648905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 451
Target Start/End: Original strand, 19515848 - 19515973
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    |||||| |||| ||| ||||||||||| ||  |||||||||||||||| |||||||  || | || ||||||||||||||  ||||| |||||||||||     
T  19515848 ttttcagtacaatatcaattactttttaccaattataactctaattaatactactttcattacttacaattcaatatattttactttgcatttatgataa 19515947  T
Q  426 tagagaatgcaccaatacttaacaag 451  Q
    |  | |||| |||||||||| |||||    
T  19515948 tgaaaaatgaaccaatacttgacaag 19515973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 442
Target Start/End: Complemental strand, 734174 - 734036
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccct--ttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    |||||||||||  |||| |||||||||||  | ||||||||||||||||  ||  ||||||||||||| || | |||||  |||| | |||| |||||||    
T  734174 aaaataattgacacatttcacttttcaatggattattaattacttttttttctaattataactctaat-aatattactttcatcactcccaactcaatat 734076  T
Q  403 attccactttacatttatgatagtagagaatgcaccaata 442  Q
    |||  ||| ||||||||||||| ||| |||||||||||||    
T  734075 attttactatacatttatgataatagtgaatgcaccaata 734036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 424
Target Start/End: Original strand, 8385022 - 8385140
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||||||| | ||| |||||||||||||| |||||||||| ||||| |  |||||||| ||||||   ||||||  ||||||| || ||||||||||    
T  8385022 aaaataattgacttatttcacttttcaatacaatattaattacattttt-caattataactttaattatttctactttcatcattttcagttcaatatat 8385120  T
Q  405 tccactttacatttatgata 424  Q
    |  | |||||||||||||||    
T  8385121 tatattttacatttatgata 8385140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 9472381 - 9472487
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||||||  |||||| |||||||| |  |||||||| ||||||| |||||||  | || |  ||||||||||||||| ||| ||||||    
T  9472381 catttcacttttcaatacaacattaatcactttttttcaattataactataattaatactactttcaccactatcaattcaatatattctactatacatt 9472480  T
Q  418 tatgata 424  Q
    |||||||    
T  9472481 tatgata 9472487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 443
Target Start/End: Original strand, 37028724 - 37028842
Alignment:
Q  325 cttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    ||||| |||| | ||||||||| |||||||  ||||||||||||||||| | |||||  |||| || || ||||  ||||| ||||||||||||||||||    
T  37028724 ctttttaatataatattaattatttttttctatttataactctaattaatattactttcatcactttcagttcataatatttcactttacatttatgata 37028823  T
Q  425 gtagagaatgcaccaatac 443  Q
     | || ||| |||||||||    
T  37028824 atggataatacaccaatac 37028842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 405
Target Start/End: Original strand, 19009791 - 19009892
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattac-ttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||||||   ||| |||||||||||||| |||||||||| |||||| | |||||||||||| |||| || ||||  |||||| |||| ||||||||    
T  19009791 aaaataattgatcaatttcacttttcaatacaatattaattacttttttttcatttataactctacttaataccacttttatcattcccaactcaatata 19009890  T
Q  404 tt 405  Q
    ||    
T  19009891 tt 19009892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 36103374 - 36103305
Alignment:
Q  393 aattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    |||||||||||||||| |||| ||| |||||||| ||||||||| | ||||||||||||  |||||||||    
T  36103374 aattcaatatattccattttatattcatgatagtggagaatgcatcgatacttaacaagaacacttaaaa 36103305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 424
Target Start/End: Complemental strand, 38873082 - 38872964
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    ||||| |||||| ||||| || |||| |||||| ||||||||||||||||||  ||||||||||||   | |||||||  | || | |||||||||||||    
T  38873082 caaaaaaattgactcatttcattttttaatacaatattaattacttttttccgattataactctaaccgatactactttcaccactcccaattcaatata 38872983  T
Q  404 ttccactttacatttatgata 424  Q
    ||  |||||| ||||||||||    
T  38872982 tt--actttatatttatgata 38872964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 446
Target Start/End: Original strand, 25604328 - 25604448
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    |||||||| ||  |||||||||||||||||   ||||| ||||||||| | ||  || || | | |||||||||||||||| | ||| |||||||||||     
T  25604328 ttttcaatccaacattaattacttttttccaactataattctaattaatattatctacattactcccaattcaatatattctaatttgcatttatgataa 25604427  T
Q  426 tagagaatgcaccaatactta 446  Q
     | ||||||||||||||||||    
T  25604428 gaaagaatgcaccaatactta 25604448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 373
Target Start/End: Complemental strand, 36103610 - 36103543
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    ||||||| |||| |||| ||| |||||||||| ||||||||||||||| |||||||| |||||||||||    
T  36103610 aaaataactgag-catttcacctttcaatacaatattaattactttttcccctttatgactctaattaa 36103543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 468
Target Start/End: Complemental strand, 11726795 - 11726720
Alignment:
Q  393 aattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||| ||||| || |||||||||| |||||||||  ||||| ||||||  | ||||||||||||||    
T  11726795 aattcaatatattctactttgcaattatgatagtggagaatgcattaatacataacaatagtacttaaaactattt 11726720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 14384445 - 14384299
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattca 398  Q
    ||||||||| || ||| ||||| || |||| ||||   ||||||||||||||||  |  |||||| ||||||||| |||||||   ||| |  |||||||    
T  14384445 gtcccaaaacaactgactcatttcattttttaatattatattaattacttttttttcaattataattctaattaatactactttcttcactctcaattca 14384346  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatactt 445  Q
    |||||||  ||||||||||||||||| |   ||||||||||||||||    
T  14384345 atatattatactttacatttatgataatgatgaatgcaccaatactt 14384299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 423
Target Start/End: Complemental strand, 6685771 - 6685706
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgat 423  Q
    |||||| ||||||||| || ||||  | || |||||||||||||||||| ||||||||||||||||    
T  6685771 ttataattctaattaatacaactttcaccacttccaattcaatatattctactttacatttatgat 6685706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 13375636 - 13375591
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattactt 349  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||    
T  13375636 caaaataactgagtcatttcacttttcaatacaatattaattactt 13375591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 14284439 - 14284367
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    |||||||||||| |||||||||  | ||||||||||| ||||||||| ||||||||||| || ||| |||||||    
T  14284439 gtcccaaaataactgagtcattttatttttcaatacaatattaatta-ttttttcccttcatgactgtaattaa 14284367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 422
Target Start/End: Complemental strand, 16865055 - 16864978
Alignment:
Q  345 tacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    ||||||||| |  |||||||||||||||| |  ||||  ||||||  |||||||||||||| ||||||||||||||||    
T  16865055 tactttttttcaattataactctaattaatatcactttcatcattcacaattcaatatatttcactttacatttatga 16864978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 424
Target Start/End: Original strand, 24451725 - 24451847
Alignment:
Q  301 tcccaaaataattgagtcattccacttttcaatacagtattaatta-cttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||||| | ||||||| |||||| ||||||| |||||||||  |||||| |  |||||||||||||||| | |||||  | |  ||||||| |||    
T  24451725 tcccaaaataactaagtcatttcactttccaatacaatattaattatttttttttcaattataactctaattaatattactttcaccccttccaatacaa 24451824  T
Q  400 tatattccactttacatttatgata 424  Q
    ||||||| ||  |||||||||||||    
T  24451825 tatattctac--tacatttatgata 24451847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 423
Target Start/End: Complemental strand, 44284459 - 44284362
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgat 423  Q
    |||||||| || ||||||||| ||| || | ||||||||||||||||| | |||||  |||| || ||||| ||||| ||||||||||  ||||||||    
T  44284459 ttttcaatgcaatattaattattttatttcatttataactctaattaataatactttcatcactttcaatttaatattttccactttaagtttatgat 44284362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 422
Target Start/End: Original strand, 2427323 - 2427423
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatg 421  Q
    |||||||||||| | |||||||||||||||| ||  |||||||   |||||| |||||||  | || | |||||||||||||||| ||||| ||||||||    
T  2427323 cacttttcaatataatattaattactttttttccaattataacatcaattaatactactttcaccactcccaattcaatatattctactttgcatttatg 2427422  T
Q  422 a 422  Q
    |    
T  2427423 a 2427423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 408
Target Start/End: Original strand, 44736700 - 44736768
Alignment:
Q  340 ttaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattcca 408  Q
    ||||||||||||||||  |||||||||||||||| |||||||  |||| |  | |||||||||||||||    
T  44736700 ttaattacttttttccaattataactctaattaatactacttttatcactctcgattcaatatattcca 44736768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 444
Target Start/End: Complemental strand, 883223 - 883172
Alignment:
Q  393 aattcaatatattccactttacatttatgatagtagagaatgcaccaatact 444  Q
    |||||||||| |||||||| |||||||||||| | | |||||||||||||||    
T  883223 aattcaatatcttccacttcacatttatgataatggtgaatgcaccaatact 883172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 443
Target Start/End: Original strand, 12524318 - 12524377
Alignment:
Q  384 atcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatac 443  Q
    |||||| |||||||||||| ||||||||| ||||||||||  |||  |||||||||||||    
T  12524318 atcattcccaattcaatatcttccactttgcatttatgatcatagtaaatgcaccaatac 12524377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 450
Target Start/End: Original strand, 33755293 - 33755348
Alignment:
Q  395 ttcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    |||||||||||||| ||| |||||||||||| | |||||  |||||||||||||||    
T  33755293 ttcaatatattccattttgcatttatgatagaaaagaatagaccaatacttaacaa 33755348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 468
Target Start/End: Complemental strand, 36396531 - 36396456
Alignment:
Q  393 aattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||| ||||||||  ||||| ||||||||| ||| |||||||||| |||||| | |||| ||||||||||| ||||    
T  36396531 aatttaatatattatactttgcatttatgacagtggagaatgcactaatactcatcaagagcacttaaaaccattt 36396456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 405
Target Start/End: Original strand, 43182241 - 43182320
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatatt 405  Q
    |||||||||||  ||||||||||||||| |  |||||||| ||||||| |||| ||  | || |||||||||||||||||    
T  43182241 ttttcaatacaacattaattactttttttcaattataactttaattaatactattttcaccacttccaattcaatatatt 43182320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 381
Target Start/End: Complemental strand, 5007685 - 5007627
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactactt 381  Q
    ||||||||||| || |||||||||| ||||| |  |||||||||||||||| |||||||    
T  5007685 cacttttcaatgcaatattaattaccttttttcaattataactctaattaatactactt 5007627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 424
Target Start/End: Original strand, 26273758 - 26273824
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    |||||| | ||||||| |||||||  |||| | |||||||||||||||| ||||| |||||||||||    
T  26273758 ttataaatttaattaatactactttcatcactcccaattcaatatattctactttgcatttatgata 26273824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 424
Target Start/End: Complemental strand, 43427194 - 43427128
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    ||||||| |||||||| |||||||  |||| | |||||||||||||||| | ||| |||||||||||    
T  43427194 ttataacactaattaatactactttcatcactcccaattcaatatattctattttgcatttatgata 43427128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 447
Target Start/End: Complemental strand, 45524023 - 45523961
Alignment:
Q  385 tcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaa 447  Q
    |||||| ||||| ||||||||| |||||||||||| |||  |||||||| || ||||||||||    
T  45524023 tcattttcaatttaatatattctactttacatttaagatgatagagaatacaacaatacttaa 45523961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 425
Target Start/End: Complemental strand, 13538343 - 13538310
Alignment:
Q  392 caattcaatatattccactttacatttatgatag 425  Q
    ||||||||||| ||||||||||||||||||||||    
T  13538343 caattcaatatcttccactttacatttatgatag 13538310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 6075487 - 6075551
Alignment:
Q  348 ttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccacttt 412  Q
    ||||||||  |||||||||||||||| |||||||  |||| | |||||| ||||||||| |||||    
T  6075487 ttttttccaattataactctaattaatactactttcatcactcccaatttaatatattctacttt 6075551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 468
Target Start/End: Complemental strand, 43950522 - 43950446
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||| ||||| |||||||| || | || ||| || |||||||||||||   || ||||||||||||    
T  43950522 caattcaatatattctactttgcatttatgttaatggaaaatacatcaatacttaacaaaaacatttaaaactattt 43950446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 1e-57; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 41031517 - 41031684
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||| ||||||| |||||||  ||||||||||||||||||||    
T  41031517 caaaataattgagtcatttcacttttcaatacaatattaattacttttttccatttataactttaattaatactactttcatcatttccaattcaatata 41031616  T
Q  404 ttccactttacat---ttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    || ||||||||||   |||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  41031617 tttcactttacatttattatgatagtggaaaatgcaccaatacttaacaagtgcacttaaaactattt 41031684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 300 - 466
Target Start/End: Original strand, 54493850 - 54494015
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| |||| |||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| ||    
T  54493850 gtcccaaaataactgagccatttcacttttca-tacaatattaattacttttttccctttataactctaattaatactactttcatcatttccaatttaa 54493948  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactat 466  Q
    |||||| |||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||    
T  54493949 tatatttcactttacatttatgatagtggagaatacgccaatacttaacaagtgcacttaaaactat 54494015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 33994598 - 33994766
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||| ||||||||| |||||||||||||| |||||| || |||||||||||||||||||||||||| || ||||  ||||||  || |||||    
T  33994598 gtccaaaaataactgagtcatttcacttttcaatacaatattaaatatttttttccctttataactctaattaataccactttcatcattctcagttcaa 33994697  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  33994698 tatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaattattt 33994766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 345 - 468
Target Start/End: Complemental strand, 32827425 - 32827302
Alignment:
Q  345 tacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatact 444  Q
    |||||| |||||||||||||||||||||| |||||||  |||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||     
T  32827425 tactttgttccctttataactctaattaatactactttcatcatttctaattcaatatatttcactttacatttatgatagtggagaatgcaccaatacg 32827326  T
Q  445 taacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||||||||    
T  32827325 taacaagtgcacttaaaactattt 32827302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 303 - 468
Target Start/End: Original strand, 5245356 - 5245521
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    ||||||||| |||| |||| ||||||||||||||  ||||||||| ||||||||||||||||||||||||| || ||||  |||| |  |||||||||||    
T  5245356 ccaaaataagtgagccatttcacttttcaatacatgattaattacatttttccctttataactctaattaataccactttcatcactctcaattcaatat 5245455  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||  |||||||||| | |||||| ||||||||||||||||| ||||||||||||||||    
T  5245456 attccactttgtatttatgatattggagaatacaccaatacttaacaagagcacttaaaactattt 5245521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 306 - 462
Target Start/End: Complemental strand, 21296663 - 21296507
Alignment:
Q  306 aaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatatt 405  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||  |  | |||||||||||||||||    
T  21296663 aaataactgagtcatttcacttttcaatacaatattaattacttttttccttttataactctaattaatactactttcacaacttccaattcaatatatt 21296564  T
Q  406 ccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    | ||||| |||||||||||||  | ||||||||||||||||||||| ||| ||||||    
T  21296563 ctactttgcatttatgatagtgaaaaatgcaccaatacttaacaagagcatttaaaa 21296507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 300 - 464
Target Start/End: Complemental strand, 32023267 - 32023103
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||| ||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||||||||| | |||||  |||| |  ||||||||    
T  32023267 gtcctaaaataactgagtcatttcactttccaatacaatattaattatttttttccctttataactctaattaatattactttcatcactctcaattcaa 32023168  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaact 464  Q
    ||||||| ||||| ||||||| ||||| |||||||||||||||||||||||  | ||||||||||    
T  32023167 tatattcaactttgcatttataatagtggagaatgcaccaatacttaacaaaagtacttaaaact 32023103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 305 - 468
Target Start/End: Complemental strand, 26134864 - 26134701
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||||||||| ||||||||||||||  ||||| ||||||||||| ||||||||||||||||  |||||||  |||| | ||||||||||||||    
T  26134864 aaaataagtgagtcatttcacttttcaatacatcattaactacttttttccttttataactctaattagtactactttcatcactcccaattcaatatat 26134765  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    | |||||| ||||||||||||| ||||||  || ||||||||||||| ||||||||||| ||||    
T  26134764 ttcactttgcatttatgatagtggagaatagactaatacttaacaagagcacttaaaacaattt 26134701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 54122389 - 54122222
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| | ||||||| |||||||||||| |  ||||||||||||||||| |||||||||||||| || |||||||  |  | |||||||||||    
T  54122389 gtcccaaaataacttagtcatttcacttttcaatataa-attaattacttttttccttttataactctaatcaatactactttcacaacttccaattcaa 54122291  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||| |||||| ||||||||||||| |||||||||||||||||||||||   || ||||||||||||    
T  54122290 tatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaaaaacatttaaaactattt 54122222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 303 - 468
Target Start/End: Complemental strand, 39866716 - 39866551
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    |||||||||||||| ||||  ||||| | ||||| ||||||||||||||| |||||||||||||||||||| || ||||  |||| |  ||||||||| |    
T  39866716 ccaaaataattgagccattttactttcctatacaatattaattactttttcccctttataactctaattaataccactttcatcactcacaattcaatgt 39866617  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||| |||||| ||||||||||||| |||||| ||||||||||||||||   |||||||||||||||    
T  39866616 atttcactttgcatttatgatagtggagaatacaccaatacttaacaaaatcacttaaaactattt 39866551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 9017740 - 9017910
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattactttttt--ccctttataactctaattaacactacttaaatcatttccaattc 397  Q
    |||| ||||||| |||||| || |||||||||||||| ||||||||||||||||  |||||||||| |  |||||| | |  ||  |||| |||||||||    
T  9017740 gtcctaaaataactgagtcgtttcacttttcaatacaatattaattacttttttttccctttataatttcaattaatattgttttcatcacttccaattc 9017839  T
Q  398 aatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||| |||||| ||||||| ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  9017840 aatatatttcactttgcatttataatagtggagaatgcaccaatacttaacaaaagcacttaaaactattt 9017910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 349 - 468
Target Start/End: Original strand, 45392080 - 45392199
Alignment:
Q  349 tttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaac 448  Q
    ||||||| ||||||||||||||||| | |||||  |||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||| |||||    
T  45392080 tttttccttttataactctaattaatattactttcatcatttccaattcaatatatttcactttacatttacgatagtagataatgcaccaatagttaac 45392179  T
Q  449 aagtgcacttaaaactattt 468  Q
    || | |||||||||||||||    
T  45392180 aaattcacttaaaactattt 45392199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 304 - 462
Target Start/End: Original strand, 15280550 - 15280707
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||| | ||| ||||||||||||||  ||||||||||||||||| |||||||| |||||||| |||||||  |||| | |||||||||||||    
T  15280550 caaaataagtgaataatttcacttttcaatacatcattaattacttttttccttttataaccctaattaatactactttcatcactcccaattcaatata 15280649  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    ||||||||| ||||||||||||| |||||| || | ||| | |||||||||||||||||    
T  15280650 ttccactttccatttatgatagtggagaataca-cgatagtgaacaagtgcacttaaaa 15280707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 300 - 412
Target Start/End: Complemental strand, 39365183 - 39365071
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| |||| |||| || ||||||||||| ||||||||||||||| |||||||||||||||||||| |||| ||  |||||| |||||||||    
T  39365183 gtcccaaaataactgagccatttcaattttcaatacaatattaattactttttcccctttataactctaattaatactattttcatcattcccaattcaa 39365084  T
Q  400 tatattccacttt 412  Q
    |||||||||||||    
T  39365083 tatattccacttt 39365071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 384 - 474
Target Start/End: Original strand, 48744284 - 48744374
Alignment:
Q  384 atcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactatttattttt 474  Q
    ||||||| |||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||||    
T  48744284 atcattttcaattcaatatatttcactttacatttatgatagtggagaatgcatcaatacttaacaaatgcacttaaaactattttttttt 48744374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 305 - 468
Target Start/End: Complemental strand, 54845679 - 54845514
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattac--ttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    ||||||| | ||||||| ||||||| |||||| |||||||||   |||||||  ||||||||||||||||| |||||||  || | ||| ||||||||||    
T  54845679 aaaataactaagtcatttcactttttaatacaatattaattatatttttttctatttataactctaattaatactactttcattacttctaattcaatat 54845580  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||| ||||||||||| ||||||||||| | || ||||||||   |||||||||||||||    
T  54845579 attccactttgcatttatgatactagagaatgcatcgatccttaacaaaaacacttaaaactattt 54845514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 445
Target Start/End: Complemental strand, 1334936 - 1334802
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||||||||||||| ||||||||||||     |||||||||||||||| ||||||||||||||||| |||||||  | || | ||||||||||||||    
T  1334936 aaaataattgagtcatttcacttttcaata-----ttaattacttttttcc-tttataactctaattaatactactttcaccactcccaattcaatatat 1334843  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatactt 445  Q
    || |||||||||||||||||    |||||||||||||||||    
T  1334842 tctactttacatttatgataaagaagaatgcaccaatactt 1334802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 26832012 - 26832180
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||| ||||| |||||||||  | |||||||||||  ||||||||||||||| |   ||||||||||||||| |||||||  |||| | |||||| ||    
T  26832012 gtcccataataaatgagtcattttatttttcaatacaacattaattactttttttcaaatataactctaattaatactactttcatcactaccaatttaa 26832111  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||| |||||| |||||||| | || ||||||||| |||||||||| ||| |||| |||||||||||    
T  26832112 tatatttcactttgcatttatggtggtggagaatgcatcaatacttaataagagcacgtaaaactattt 26832180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 300 - 451
Target Start/End: Complemental strand, 30261668 - 30261516
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaa-ttca 398  Q
    ||||||||| ||||||  |||| |||||||||||||| || |||||||||||| |   |||||||||||||||| |||||||  |||| | |||| ||||    
T  30261668 gtcccaaaaaaattgacccatttcacttttcaatacaataataattactttttcctaattataactctaattaatactactttcatcactcccaaattca 30261569  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    ||||||||||||||||||||||||||  |  |||||||||||||||| |||||    
T  30261568 atatattccactttacatttatgataagaaggaatgcaccaatacttgacaag 30261516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 312 - 451
Target Start/End: Complemental strand, 39329904 - 39329765
Alignment:
Q  312 ttgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactt 411  Q
    |||| ||||| ||||||||||||||  | |||||||||||||||  |||||| ||||||||| |||||||  |||| |  ||||||||||||||| ||||    
T  39329904 ttgactcatttcacttttcaatacaacaataattacttttttccaattataattctaattaatactactttcatcactctcaattcaatatattctactt 39329805  T
Q  412 tacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    | |||||||||||  | |||||||||||||||||||||||    
T  39329804 tgcatttatgataagaaagaatgcaccaatacttaacaag 39329765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 300 - 450
Target Start/End: Complemental strand, 54458476 - 54458325
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttcc-ctttataactctaattaacactacttaaatcatttccaattca 398  Q
    |||||||||||| ||||| |||  ||||||||||||| |||||||||||||||| | |||||||||  ||||||| | |  ||   |||||  |||||||    
T  54458476 gtcccaaaataactgagtaattttacttttcaatacaatattaattactttttttctctttataaccttaattaatattgttttcctcattctcaattca 54458377  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    |||||||||||||||||||||||||| | ||||||||||| |||||||||||    
T  54458376 atatattccactttacatttatgataatggagaatgcacccatacttaacaa 54458325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 445
Target Start/End: Original strand, 51164898 - 51165038
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaa-cactacttaaatcatttccaattcaatata 403  Q
    |||||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||  |  | | | |||||||||||    
T  51164898 aaaataatcgagtcatttcacttttcaatacaatattaattac-tttttccctttataactctaattaagtactactttcactactccaaattcaatata 51164996  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatactt 445  Q
    ||| |||||||||||||||||    |||||||||||||||||    
T  51164997 ttctactttacatttatgataaagaagaatgcaccaatactt 51165038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 305 - 445
Target Start/End: Complemental strand, 38600966 - 38600827
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||| ||| || ||||||||||||||||| |||||||  |||| | ||| ||||||||||    
T  38600966 aaaataattgagtcatttcacctttcaatacaatattaattactcttt-ccatttataactctaattaatactactttcatcactcccagttcaatatat 38600868  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatactt 445  Q
    |  |||||||||||||| ||    |||||||||||||||||    
T  38600867 tatactttacatttatggtaaagaagaatgcaccaatactt 38600827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 306 - 426
Target Start/End: Original strand, 49003217 - 49003337
Alignment:
Q  306 aaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatatt 405  Q
    |||||| |||||||||  ||||||||||||| ||||||||||||||||| |||||||||||| ||||| | |  ||  |||| || ||||||||||||||    
T  49003217 aaataagtgagtcattttacttttcaatacaatattaattacttttttctctttataactctcattaatattcttttcatcactttcaattcaatatatt 49003316  T
Q  406 ccactttacatttatgatagt 426  Q
    |||| ||||||||||||||||    
T  49003317 ccaccttacatttatgatagt 49003337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 384 - 468
Target Start/End: Original strand, 54782988 - 54783072
Alignment:
Q  384 atcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||||||||| |||||||||||||||||||   | ||||||||||||||||| ||||||||||||||||||||    
T  54782988 atcatttccaattcaatatatttcactttacatttatgatagcgcataatgcaccaatacttaagaagtgcacttaaaactattt 54783072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 304 - 468
Target Start/End: Complemental strand, 46786143 - 46785977
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||  ||| ||||||| |||| | ||||||||||||||||| |||||||||| || |||| |||||||  |||  | |||||||||||||    
T  46786143 caaaataactgagctatttcactttttaatataatattaattacttttttcgctttataactttagttaatactactttcatcgctcccaattcaatata 46786044  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaat--acttaacaagtgcacttaaaactattt 468  Q
    || |||||| ||||||||||||| ||||||  ||||||  ||||||||||  || ||||||||||||    
T  46786043 tttcactttgcatttatgatagtggagaatataccaatacacttaacaagatcatttaaaactattt 46785977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 300 - 450
Target Start/End: Complemental strand, 21585576 - 21585426
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| ||||||||| |||||| ||||||| ||||||||| ||||| ||  |||||||||||||||| | |||||  | || ||||||| |||    
T  21585576 gtcccaaaataactgagtcatttcactttccaatacaatattaattattttttcccaattataactctaattaatattactttcaccacttccaatacaa 21585477  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||||||| | |||||||||||||||    |||||| ||||||| |||||||    
T  21585476 tatattctattttacatttatgataaagaagaatgaaccaataattaacaa 21585426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 2868515 - 2868683
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||| |||  |||| |||||||||||||| ||||||||| |||||||   ||| |||||||||||| | |||||  |||| | ||||||| |    
T  2868515 gtcctaaaataactgatccatttcacttttcaatacaatattaattatttttttctaattacaactctaattaatattactttcatcactcccaattcga 2868614  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    | ||||||||||| ||||||||| ||| ||||||||| |||||| ||||||  | ||||||||| ||||    
T  2868615 tttattccactttgcatttatgacagtggagaatgcagcaatacataacaaaagaacttaaaaccattt 2868683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 356 - 468
Target Start/End: Complemental strand, 43639626 - 43639514
Alignment:
Q  356 ctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgca 455  Q
    |||||||||||||||||| |||||||  |  | ||||||||||||||||| |||||| ||||||||||||| || |||||| |||||||||||||  |||    
T  43639626 ctttataactctaattaatactactttcacaacttccaattcaatatatttcactttgcatttatgatagtggaaaatgcatcaatacttaacaacagca 43639527  T
Q  456 cttaaaactattt 468  Q
    |||||||| ||||    
T  43639526 cttaaaaccattt 43639514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 440
Target Start/End: Complemental strand, 46194372 - 46194233
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||| || ||||||  |||| |||||||||||||| ||||||||||||||||||  ||||||| |||||||| |||||||  | || |  ||||||||    
T  46194372 gtcccagaaaaattgacccatttcacttttcaatacaatattaattacttttttccaattataacactaattaatactactttcaccactctcaattcaa 46194273  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaa 440  Q
    ||||||| ||||| |||||||||||  ||||||||||||||    
T  46194272 tatattctactttgcatttatgata-aagagaatgcaccaa 46194233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 37042018 - 37041896
Alignment:
Q  324 acttttcaatacagt-attaattacttttttc--cctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttat 420  Q
    ||||||||||||| | |||||||||||||||   |  |||||||||||||||| |||||||  |||||||||||||||||||||| ||||||| ||||||    
T  37042018 acttttcaatacaattattaattactttttttttcaattataactctaattaatactactttcatcatttccaattcaatatatttcactttatatttat 37041919  T
Q  421 gatagtagagaatgcaccaatac 443  Q
    |||||| ||||||  ||||||||    
T  37041918 gatagtggagaatagaccaatac 37041896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 300 - 451
Target Start/End: Complemental strand, 42547272 - 42547121
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||| |||||| ||||| ||||||||||||||  | |||||| ||| |||   ||||| |||||||||| |||||||  |||| | |||||||||    
T  42547272 gtcccaaaaaaattgactcatttcacttttcaatacaacaataattattttattcaaattatagctctaattaatactactttcatcactcccaattcaa 42547173  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    |||||||   ||| |||||||||||  | |||||||||||||||||||||||    
T  42547172 tatattctcttttgcatttatgataagaaagaatgcaccaatacttaacaag 42547121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 323 - 446
Target Start/End: Complemental strand, 44219176 - 44219053
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    ||||||||||| || ||||||||||||||||||  |||||||||||||||| |||| ||  || | |||||||||||||||||| |||||  ||||||||    
T  44219176 cacttttcaatgcaatattaattacttttttccaattataactctaattaatactattttcattacttccaattcaatatattctactttgtatttatga 44219077  T
Q  423 tagtagagaatgcaccaatactta 446  Q
    || | | ||||||||||| |||||    
T  44219076 taatggggaatgcaccaacactta 44219053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 305 - 447
Target Start/End: Original strand, 44234037 - 44234178
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||||| ||||||| || ||||||||||| ||||||||| |||||||  ||||||| ||||||||| |||||||  |||| || |||||||||||||    
T  44234037 aaaataatttagtcatttca-ttttcaatacaatattaattatttttttctttttataattctaattaagactactttcatcaatttcaattcaatatat 44234135  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaa 447  Q
    | |||||| |||||| |||| |  |||| | ||||||||||||    
T  44234136 ttcactttgcatttacgataatgaagaacgtaccaatacttaa 44234178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 344 - 448
Target Start/End: Original strand, 9218130 - 9218234
Alignment:
Q  344 ttacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatac 443  Q
    |||||||||||| ||||||||||||||||| |||||||  |||| |  ||||||| ||||||| ||||| |||||||||||  | |||||||||||||||    
T  9218130 ttacttttttccatttataactctaattaatactactttcatcactctcaattcattatattctactttgcatttatgataagaaagaatgcaccaatac 9218229  T
Q  444 ttaac 448  Q
    |||||    
T  9218230 ttaac 9218234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 326 - 450
Target Start/End: Original strand, 48409551 - 48409675
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    |||||||||||  |||||||||||||||||  |||||||||||||||| |||||||  | || | ||||||||| |||||| |||||||||||||||||     
T  48409551 ttttcaatacaacattaattacttttttccaattataactctaattaatactactttcaccactcccaattcaacatattctactttacatttatgataa 48409650  T
Q  426 tagagaatgcaccaatacttaacaa 450  Q
       ||||| ||||||||||| ||||    
T  48409651 agaagaatccaccaatacttgacaa 48409675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 365 - 468
Target Start/End: Complemental strand, 14756215 - 14756112
Alignment:
Q  365 tctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaact 464  Q
    ||||||||| |||| ||  ||||||| ||||| ||||||||| ||||| ||||||||||||| ||||||| |||| ||||||||||| |||||||||| |    
T  14756215 tctaattaatactatttttatcattttcaatttaatatattctactttgcatttatgatagtggagaatgtaccagtacttaacaagagcacttaaaatt 14756116  T
Q  465 attt 468  Q
    ||||    
T  14756115 attt 14756112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 420
Target Start/End: Complemental strand, 54021618 - 54021504
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||||| ||||||| |||||||||||| | |||||||||  ||||||||||||||| ||||||||| |||||||  | || | | ||||||||||||    
T  54021618 aaaataattaagtcatttcacttttcaatataatattaatta-atttttccctttataattctaattaatactactttcaccactccgaattcaatatat 54021520  T
Q  405 tccactttacatttat 420  Q
    || |||||||||||||    
T  54021519 tctactttacatttat 54021504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 468
Target Start/End: Original strand, 53050985 - 53051135
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||| || |||||||||||||| |||  |||||||||||||||| |||||||  |  | | |||||||||||||||  ||||||||||    
T  53050985 catttcacttttcaatgcaatattaattacttttctccaattataactctaattaatactactttcacaactcccaattcaatatattatactttacatt 53051084  T
Q  418 tatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||    ||||||||| ||||||| | ||  ||||| ||||||||||    
T  53051085 tatgataaacaagaatgcacaaatacttgaaaaaggcactcaaaactattt 53051135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 36097822 - 36097653
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttt-tccctttataactctaattaacactacttaaatcatttccaattca 398  Q
    |||||||||||  |||| |||| ||||||||||| || ||||||||  ||| | || ||||||||| || ||||| | |||||  |||| |  |||||||    
T  36097822 gtcccaaaatatctgagccatttcacttttcaatgcaatattaatttttttctctctctttataacgctgattaatattactttcatcactctcaattca 36097723  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||| ||||| | | ||| ||||||||||| |||||||||||| | ||||||||| ||||    
T  36097722 atatattccactttgcatttctaacagtggagaatgcaccgatacttaacaagagtacttaaaaccattt 36097653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 358 - 450
Target Start/End: Original strand, 52325176 - 52325268
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    |||||||||||||||| |||||||   |||||  ||||||||||||||||||||| ||||||||||||   ||||||||||||||| ||||||    
T  52325176 ttataactctaattaatactactttcgtcattctcaattcaatatattccactttgcatttatgatagcgtagaatgcaccaatacataacaa 52325268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 48744166 - 48744239
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    |||||||||||| | |||||||  |||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  48744166 gtcccaaaataactaagtcattttactttttaatacaatattaattacttttttctctttataactctaattaa 48744239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 333 - 424
Target Start/End: Original strand, 1923064 - 1923155
Alignment:
Q  333 tacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    |||| ||||||||||||||||||  ||||||| |||||||| |||||||  | || | |||||||||||||||| ||||| |||||||||||    
T  1923064 tacaatattaattacttttttccaattataacactaattaatactactttcaccactcccaattcaatatattctactttgcatttatgata 1923155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 300 - 442
Target Start/End: Original strand, 12744754 - 12744897
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattact-tttttccctttataactctaattaacactacttaaatcatttccaattca 398  Q
    ||||||||||| ||||| |||| ||||||||||| || ||||||||| | |||||| ||| | ||| || ||||| || ||||  |||| | | ||||||    
T  12744754 gtcccaaaatatttgagccatttcacttttcaatgcaatattaattattatttttctcttcacaacgcttattaataccactttcatcactcctaattca 12744853  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaata 442  Q
    ||||| |||||||| ||||| | ||||| |||||||||||||||    
T  12744854 atataatccactttgcatttctaatagtggagaatgcaccaata 12744897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 43640732 - 43640677
Alignment:
Q  299 ggtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttc 354  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  43640732 ggtcccaaaataactgagtcatttcacttttcaatacaatattaattacttttttc 43640677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 468
Target Start/End: Complemental strand, 1772274 - 1772104
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttc-----cctttataactctaattaacactacttaaatcatttccaattca 398  Q
    |||||||| |||  |||| || ||||||||||| ||||||||||||||||      ||||||| || |||||||| | |||||  |||| | | ||||||    
T  1772274 caaaataactgaaccatttcatttttcaatacaatattaattacttttttttttttcctttatgaccctaattaatattactttcatcactcctaattca 1772175  T
Q  399 atatattc-cactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||| || |||||| | ||||||||||| ||||||  ||||||||||||||||  |||||||||| ||||    
T  1772174 atataatcacactttgcttttatgatagtggagaatataccaatacttaacaagaacacttaaaaccattt 1772104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 462
Target Start/End: Complemental strand, 11251201 - 11251131
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    ||||| |||||| | || ||| ||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  11251201 caatttaatatagttcaatttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaa 11251131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 462
Target Start/End: Complemental strand, 53876510 - 53876440
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    |||||||||||||| |||||||||||||||||||| || ||||||| |||| |||||||  ||||||||||    
T  53876510 caattcaatatatttcactttacatttatgatagtggaaaatgcacaaatatttaacaaaagcacttaaaa 53876440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 462
Target Start/End: Original strand, 8706112 - 8706249
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattca--atatattccactttacatttat 420  Q
    |||||||||||||| |||| ||||||||||||   |||||||||||||||| |||||||  |||| |   | ||||  |||||||||||||| |||||||    
T  8706112 cacttttcaatacaatattgattacttttttctaattataactctaattaatactactttcatcactcttagttcaatatatattccactttgcatttat 8706211  T
Q  421 gatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
        ||  |||||||| |||||||||||||| ||||||||||    
T  8706212 ----gtgaagaatgcatcaatacttaacaagagcacttaaaa 8706249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 462
Target Start/End: Original strand, 9057999 - 9058136
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattca--atatattccactttacatttat 420  Q
    |||||||||||||| |||| ||||||||||||   |||||||||||||||| |||||||  |||| |   | ||||  |||||||||||||| |||||||    
T  9057999 cacttttcaatacaatattgattacttttttctaattataactctaattaatactactttcatcactcttagttcaatatatattccactttgcatttat 9058098  T
Q  421 gatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
        ||  |||||||| |||||||||||||| ||||||||||    
T  9058099 ----gtgaagaatgcatcaatacttaacaagagcacttaaaa 9058136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 373
Target Start/End: Complemental strand, 24619074 - 24619005
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    ||||||||||||  |||| ||||||| |||||||||||||||| ||||||||  ||||||||||||||||    
T  24619074 caaaataattgatccatttcactttttaatacagtattaattatttttttccgattataactctaattaa 24619005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 468
Target Start/End: Original strand, 10855027 - 10855103
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||||| ||||||||| ||| || ||||||||||||| ||| ||   |||||||||||||||    
T  10855027 caattcaatatattccactttgcatttatgagagtggataatgcaccaatacataataaaaacacttaaaactattt 10855103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 450
Target Start/End: Complemental strand, 55415595 - 55415455
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccac 409  Q
    |||||| ||||| |||||||||||| |  |||||||||||||||     |||||||||| |||| || ||||  ||||    ||||||||||| |  |||    
T  55415595 aattgattcatttcacttttcaatataacattaattacttttttttagatataactctatttaataccactttcatcaccctcaattcaatatgtgtcac 55415496  T
Q  410 tttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    |||  ||||||||||||| ||||||||||||||||||||||    
T  55415495 tttgtatttatgatagtaaagaatgcaccaatacttaacaa 55415455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 468
Target Start/End: Complemental strand, 17777155 - 17776992
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    |||| ||||||  |||| ||| |||||||| |  |||||||| |||||| |   ||||||||||||||| | || ||  |||| |  | |||||||||||    
T  17777155 aaaaaaattgatccatttcacctttcaatataacattaattaatttttttcaaatataactctaattaatattattttcatcactctcgattcaatatat 17777056  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||| |||||||| |||| |||||||||| ||||||||| ||  |||| |||||| ||||    
T  17777055 tccactttgcatttatggtagtggagaatgcacaaatacttaaaaaaagcacctaaaaccattt 17776992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 468
Target Start/End: Complemental strand, 19078456 - 19078293
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    |||| ||||||  |||| ||| |||||||| |  |||||||| |||||| |   ||||||||||||||| | || ||  |||| |  | |||||||||||    
T  19078456 aaaaaaattgatccatttcacctttcaatataacattaattaatttttttcaaatataactctaattaatattattttcatcactctcgattcaatatat 19078357  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||| |||||||| |||| |||||||||| ||||||||| ||  |||| |||||| ||||    
T  19078356 tccactttgcatttatggtagtggagaatgcacaaatacttaaaaaaagcacctaaaaccattt 19078293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 451
Target Start/End: Complemental strand, 22202463 - 22202404
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    ||||| ||||||||| ||||| ||||||||||||| || |||||||||||||||||||||    
T  22202463 caatttaatatattcaactttgcatttatgatagtggataatgcaccaatacttaacaag 22202404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 446
Target Start/End: Complemental strand, 53754219 - 53754084
Alignment:
Q  312 ttgagtcattccacttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattcaatatattccact 410  Q
    |||| ||||| || |||||||||||  |||||||| ||||||  |  |||||||||||||||| |||||||  |  |||   |||||||||||||| |||    
T  53754219 ttgactcatttcagttttcaatacaacattaattatttttttttcaattataactctaattaatactacttttactattcttaattcaatatattctact 53754120  T
Q  411 ttacatttatgatagtagagaatgcaccaatactta 446  Q
    ||||||||||||||    ||||||||||||||||||    
T  53754119 ttacatttatgataaagaagaatgcaccaatactta 53754084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 447
Target Start/End: Original strand, 26142855 - 26142987
Alignment:
Q  308 ataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattcc 407  Q
    |||| |||||||||  ||||||||||| | ||||||||||||||||||  ||||||||||| || | |||||||  | || |  ||||| |||||         
T  26142855 ataactgagtcattttacttttcaatataatattaattacttttttcctcttataactctagttgatactactttcaacactctcaatttaatat----- 26142949  T
Q  408 actttacatttatgatagtagagaatgcaccaatacttaa 447  Q
      ||| ||||||||||||| ||||||||||||||||||||    
T  26142950 --tttgcatttatgatagtggagaatgcaccaatacttaa 26142987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 424
Target Start/End: Original strand, 47496149 - 47496234
Alignment:
Q  339 attaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    ||||||||||||||||   |||||||||||||||| |||||||  |||| |   |||||||||||||  |||||||||||||||||    
T  47496149 attaattacttttttcaaattataactctaattaatactactttcatcactcttaattcaatatattagactttacatttatgata 47496234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 451
Target Start/End: Complemental strand, 11529218 - 11529126
Alignment:
Q  359 tataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    ||||||||||||||| | |||||  |||| |   |||| ||||||||||||||| ||||||||||| | ||||||| | ||||||||||||||    
T  11529218 tataactctaattaatattacttttatcactcataatttaatatattccactttgcatttatgatattggagaatgtatcaatacttaacaag 11529126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 424
Target Start/End: Complemental strand, 3862332 - 3862214
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||||| | ||||| |||||||||||||| | |||||||||||||| |  |||||||||||||||| | |||||  |||| |  ||||||| |||||    
T  3862332 aaaataattaactcatttcacttttcaatacaattttaattactttttt-caattataactctaattaatattactttcatcactctcaattcagtatat 3862234  T
Q  405 tccactttacatttatgata 424  Q
    |  | ||| |||||||||||    
T  3862233 tttaatttgcatttatgata 3862214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 424
Target Start/End: Complemental strand, 27668487 - 27668369
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||| ||||| |||||||||||| | ||||||||| ||| ||    |||||||||||||||| |||||||  |||| |   ||||||||||||    
T  27668487 aaaataactgattcatttcacttttcaatataatattaatta-tttgttttaattataactctaattaatactacttttatcactcttaattcaatatat 27668389  T
Q  405 tccactttacatttatgata 424  Q
    | |||||| |||||||||||    
T  27668388 ttcactttgcatttatgata 27668369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 462
Target Start/End: Complemental strand, 46628071 - 46627929
Alignment:
Q  317 tcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacat 416  Q
    ||||| ||||||||||| || ||||||||||| |||| | |||||||   ||||||| |||||||  ||||||  | ||||||||||||  ||||| |||    
T  46628071 tcatttcacttttcaatgcaatattaattactgtttttcatttataa---taattaatactacttttatcattctctattcaatatattatactttgcat 46627975  T
Q  417 ttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    |||||||| | |  ||| || |||||||| |||||  |||||||||    
T  46627974 ttatgataatggtaaatacatcaatacttgacaagaacacttaaaa 46627929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 411
Target Start/End: Original strand, 50736054 - 50736153
Alignment:
Q  312 ttgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactt 411  Q
    |||| ||||| || ||||||||| |  |||||||||||||||||   ||||||||||||||| |||||||  |  | |||||||||||||||||| ||||    
T  50736054 ttgactcatttcagttttcaatagaacattaattacttttttccaactataactctaattaatactactttcactacttccaattcaatatattctactt 50736153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 411
Target Start/End: Complemental strand, 50776801 - 50776702
Alignment:
Q  312 ttgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactt 411  Q
    |||| ||||| || ||||||||| |  |||||||||||||||||   ||||||||||||||| |||||||  |  | |||||||||||||||||| ||||    
T  50776801 ttgactcatttcagttttcaatagaacattaattacttttttccaactataactctaattaatactactttcactacttccaattcaatatattctactt 50776702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 405
Target Start/End: Original strand, 39825790 - 39825871
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatatt 405  Q
    |||||||||||||  |||||||||||||||||  | |||  ||||||||| |||||||  ||||||  ||||||||||||||    
T  39825790 acttttcaatacaacattaattacttttttccgataatatatctaattaatactactttcatcattctcaattcaatatatt 39825871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 15081995 - 15082106
Alignment:
Q  351 tttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||||| ||||||||||||||||| |||| || | ||| |  ||||| |||||||| || ||| | ||||||||| | ||||||||||||||| ||||  |    
T  15081995 tttccttttataactctaattaatactatttca-tcactctcaatttaatatatttcattttgcttttatgataatggagaatgcaccaatatttaaaga 15082093  T
Q  451 gtgcacttaaaac 463  Q
    | |||||||||||    
T  15082094 gagcacttaaaac 15082106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 450
Target Start/End: Complemental strand, 29858993 - 29858881
Alignment:
Q  339 attaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcac 437  Q
    ||||||||||||||| ||  |||||| ||||||||| |||||||  | || |   |||||||||||||| |||||||||||||||||    |||||| ||    
T  29858993 attaattactttttttccaattataattctaattaatactactttcaccactcataattcaatatattctactttacatttatgataaagaagaatgtac 29858894  T
Q  438 caatacttaacaa 450  Q
    |||||||| ||||    
T  29858893 caatacttgacaa 29858881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 355
Target Start/End: Complemental strand, 3547756 - 3547701
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttcc 355  Q
    |||||||| ||||||| | ||| ||||||||||| ||| |||||||||||||||||    
T  3547756 gtcccaaattaattgacttattgcacttttcaatgcagcattaattacttttttcc 3547701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 421
Target Start/End: Complemental strand, 34081211 - 34081100
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccac 409  Q
    |||||| |||||  ||||||||| ||| || ||||||| |||| ||  |||||| | ||||||| |||||||  ||||||  ||||| ||||||||  ||    
T  34081211 aattgattcattttacttttcaaaacaataataattacattttaccaattataaatttaattaatactacttttatcattctcaatttaatatattatac 34081112  T
Q  410 tttacatttatg 421  Q
    ||||||||||||    
T  34081111 tttacatttatg 34081100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 353
Target Start/End: Complemental strand, 36791029 - 36790986
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattactttttt 353  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||    
T  36791029 aattgactcatttcacttttcaatacaatattaattactttttt 36790986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 373
Target Start/End: Original strand, 7885653 - 7885722
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    |||||| ||||||  |||| |||||||||||| | ||||||||||||||||||  |||||| |||||||||    
T  7885653 ccaaaaaaattgacccatttcacttttcaatata-tattaattacttttttccaattataattctaattaa 7885722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 450
Target Start/End: Original strand, 39144686 - 39144736
Alignment:
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||||||| ||||||||| |||||||   |||||||||||||||||||||||    
T  39144686 tatattctactttacatctatgataaaggagaatgcaccaatacttaacaa 39144736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 370
Target Start/End: Complemental strand, 51637055 - 51636985
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaat 370  Q
    |||||||||||| |||  |||| ||||||||||| || ||||| ||||||||| ||  |||||||||||||    
T  51637055 gtcccaaaataactgatccatttcacttttcaatgcaatattatttactttttcccaattataactctaat 51636985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 424
Target Start/End: Original strand, 41287295 - 41287327
Alignment:
Q  392 caattcaatatattccactttacatttatgata 424  Q
    ||||||||||||||| |||||||||||||||||    
T  41287295 caattcaatatattctactttacatttatgata 41287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 5e-57; HSPs: 101)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 300 - 480
Target Start/End: Complemental strand, 28277205 - 28277025
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||| ||||||||| || |||| |||||| ||||||||||||||||| |||||||||||||||||| || ||||  ||||||| ||||||||    
T  28277205 gtcctaaaataactgagtcatttcattttttaatacaatattaattacttttttctctttataactctaattaataccactttcatcattttcaattcaa 28277106  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactatttatttttcctctc 480  Q
    |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  28277105 tatatttcactttacatttatgatactggagaatgcaccaatacttaacaagtgcacttaaaactattttttttttctctc 28277025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 301 - 468
Target Start/End: Complemental strand, 19533085 - 19532918
Alignment:
Q  301 tcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaat 400  Q
    ||||||||||| |||||||||  ||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||  ||||||| || ||||||    
T  19533085 tcccaaaataactgagtcattttacttttcaatacaatattaattacttttttccctttataactttaattaatactactttcatcatttacagttcaat 19532986  T
Q  401 atattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  19532985 atatttcactttacatttatgatagtggagaatgaaccaatacttaacaagtacacttaaaactattt 19532918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 304 - 468
Target Start/End: Complemental strand, 36467358 - 36467194
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||| | ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||| |||| ||  ||||||||||||||||||||    
T  36467358 caaaatgactgagtcatttcacttttcaatacaatattaattactttttcccctttataactcaaattaatactattttcatcatttccaattcaatata 36467259  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    || |||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||    
T  36467258 tttcactttacatttatcatagtggagaatccaccaatacttaacaagtgcacttaaaactattt 36467194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 304 - 468
Target Start/End: Complemental strand, 49494325 - 49494162
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    ||||||||| |||||||| |||||||||||||| |||||||||||||||||| ||||||||| ||||||| | |||||  |||||||| |||||||||||    
T  49494325 caaaataatcgagtcatttcacttttcaatacactattaattacttttttcc-tttataactttaattaatattactttcatcatttctaattcaatata 49494227  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||||    
T  49494226 ttccactttacatttatgatagtggagaattgaccaatatttaacaagtgcacttaaaactattt 49494162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 306 - 468
Target Start/End: Complemental strand, 48242751 - 48242589
Alignment:
Q  306 aaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatatt 405  Q
    |||||| | ||||||| |||||||||||||| |||||||||||||||||  ||||||||| ||||||| | |||||  ||||||  ||||||||||||||    
T  48242751 aaataacttagtcatttcacttttcaatacaatattaattacttttttctttttataactttaattaatattacttttatcattctcaattcaatatatt 48242652  T
Q  406 ccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||||    
T  48242651 ccactttacatttatgatagtggaggatgcatcaatacttatcaagtgcacttaaaactattt 48242589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 8327658 - 8327826
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| |||| |||| ||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||  |||| |  ||||||||    
T  8327658 gtcccaaaataaatgagccatttcacttttcaatacatcattaattacttttttccctttataactctaattaatactactttcatcactctcaattcaa 8327757  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||| ||| ||||||||||||  ||||||  |||||||||||||||| |||||||||| |||||    
T  8327758 tatattccattttgcatttatgataggggagaatagaccaatacttaacaagagcacttaaaattattt 8327826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 303 - 468
Target Start/End: Original strand, 28839284 - 28839448
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    ||||||||| ||||||||| ||||||||||||||   |||||||||||| ||||||||||||| ||||||| |||||||  |||| | ||||||||||||    
T  28839284 ccaaaataagtgagtcatttcacttttcaatacatatttaattactttt-tccctttataactataattaatactactttcatcactcccaattcaatat 28839382  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||| ||||||||||||| ||||||  |||||||||||||||| ||| ||||||||||||    
T  28839383 attccactttgcatttatgatagtggagaatagaccaatacttaacaagagcatttaaaactattt 28839448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 45889415 - 45889247
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| ||||||||| |||||||||||||   ||||||||||||||||| ||||||||||||||||| |||||||  ||||||   |||||||    
T  45889415 gtcccaaaataagtgagtcatttcacttttcaatacgtcattaattacttttttccttttataactctaattaatactactttcatcattcataattcaa 45889316  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||| ||||||||||| | ||||||  ||||||| |||||||| ||||||||||| ||||    
T  45889315 tatattccactttgcatttatgataatggagaatagaccaatagttaacaagagcacttaaaaccattt 45889247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 305 - 468
Target Start/End: Complemental strand, 52830575 - 52830413
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||||||| |||||||| | ||||||  | |||||  |||||| |||||| |||||||    
T  52830575 aaaataactgagtcatttcacttttcaatacaatattaattacttttttctctttataattttaattagtattactttcatcatt-ccaattgaatatat 52830477  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||||||||| || |||||||||||||||||||| |||||| |||| |||||    
T  52830476 tccactttacatttatgatagtggaaaatgcaccaatacttaacaaatgcactcaaaattattt 52830413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 51848863 - 51848691
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactac--ttaaatcatttccaattc 397  Q
    |||||||||||| |||| |||| ||||||||||||||  ||||||||||||||| |||||||||||||||||||  ||||  ||  ||||||||||||||    
T  51848863 gtcccaaaataagtgagacatttcacttttcaatacatcattaattactttttttcctttataactctaattaatgctacttttttatcatttccaattc 51848764  T
Q  398 aatatattccactttacatttatgatagtagagaatgcacca--atacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||| |||||||||||| |||||| |||||  ||| |||||||  ||||||||||||||||    
T  51848763 aatatattccactttatatttatgatagtggagaatacaccaatatatttaacaatagcacttaaaactattt 51848691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 352 - 468
Target Start/End: Original strand, 26755969 - 26756085
Alignment:
Q  352 ttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    |||||||||||||||||||||| |||||||  ||||||| |||||||||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  26755969 ttccctttataactctaattaatactactttcatcattttcaattcaatatattacactttatatttatgatagtggagaatgcatcaatacttaacaag 26756068  T
Q  452 tgcacttaaaactattt 468  Q
    |||||||||||||||||    
T  26756069 tgcacttaaaactattt 26756085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 344 - 468
Target Start/End: Complemental strand, 50267561 - 50267437
Alignment:
Q  344 ttacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatac 443  Q
    |||||||||||| ||||||| ||||||||| | |||||  |||||| ||||||||||||||| |||||||||||||||||| | ||||||||||||||||    
T  50267561 ttacttttttccttttataattctaattaatattactttcatcattcccaattcaatatatttcactttacatttatgataatggagaatgcaccaatac 50267462  T
Q  444 ttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||||||||||||    
T  50267461 ttaacaagtgcacttaaaactattt 50267437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 7785440 - 7785271
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||| ||||| ||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||  |||  |  ||||||||    
T  7785440 gtcccataataactgagtcatttcacttttcaatacaatattaatta-ttttttccctttataactctaattaatactacttttatcgctctcaattcaa 7785342  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatact--taacaagtgcacttaaaactattt 468  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||  ||||||   |||||||||||||||    
T  7785341 tatatttcactttacatttatgatagtggagaatgcatcaatacttataacaataacacttaaaactattt 7785271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 3555722 - 3555554
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| ||||| ||| || |||||| ||||  ||||||||||||||||| ||||||||||||||||| |||||||  |||  | |||||||||    
T  3555722 gtcccaaaataagtgagttatttcatttttcattacatcattaattacttttttccttttataactctaattaatactactttcatctatcccaattcaa 3555623  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||| ||||||||||||| ||||||  |||||||||||| ||  ||||||||||| ||||    
T  3555622 tatattccactttgcatttatgatagtggagaatagaccaatacttaaaaaaagcacttaaaaccattt 3555554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 46536285 - 46536449
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||||||| |||||||||||||| |||||||||| ||||||||| ||||||||||||||| |||||||  |||| |   |||| ||||||    
T  46536285 caaaataactgagtcatttcacttttcaatacaatattaattacatttttccctctataactctaattaatactactttcatcactcttaatttaatata 46536384  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||  |||||||||||| |||||| || ||||| |||||||| ||||||||||| ||||    
T  46536385 ttccactttgtatttatgatagtggagaatacaacaatatttaacaagagcacttaaaaccattt 46536449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 300 - 462
Target Start/End: Complemental strand, 51749350 - 51749188
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||| ||||||||| || ||||||||| |  |||||||| |||||||||||||||||||||||||| | |||||  |||| | |||||||||    
T  51749350 gtcctaaaataagtgagtcatttcatttttcaatatatcattaattatttttttccctttataactctaattaatattactttcatcactcccaattcaa 51749251  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    ||||||||||||| ||||||||||| | ||||||  ||||||||||||||||  |||||||||    
T  51749250 tatattccactttgcatttatgataatggagaataaaccaatacttaacaagaacacttaaaa 51749188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 8773179 - 8773351
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattactttttt----ccctttataactctaattaacactacttaaatcatttccaat 395  Q
    |||||||||||| ||||  ||| || ||||||||| | ||||||||||||||||    || ||||||||||||||||| |||||||  |||| ||| | |    
T  8773179 gtcccaaaataactgagctatttcatttttcaatagaatattaattacttttttttttccttttataactctaattaatactactttcatcacttctagt 8773278  T
Q  396 tcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    | ||||||||||||||| ||| ||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  8773279 ttaatatattccactttgcatatatgacagtggagaatgcaccaatacttaacaagagcacttaaaactattt 8773351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 27698753 - 27698913
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||  ||||||  ||||||||    
T  27698753 gtcctaaaataattgagtcatttcacttttcaatacaatattaattacttttttccctttataactctaattaatattactttcatcattctcaattcaa 27698852  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||| |        ||||| ||||| |||||||||| |||| |||||| |||||||||||| |||||    
T  27698853 tatatttc--------tttatcatagtggagaatgcactaataattaacatgtgcacttaaaattattt 27698913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 304 - 450
Target Start/End: Complemental strand, 4466317 - 4466171
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||||||||||||| |||||| ||||||| ||||||||| ||||||||  |||||||||||||||| |||||||  | || ||||||| |||||||    
T  4466317 caaaataattgagtcatttcactttccaatacaatattaattatttttttccaattataactctaattaatactactttcaccacttccaatacaatata 4466218  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||| |||||||||||||||||    |||||| |||||||||||||||    
T  4466217 ttctactttacatttatgataaagaagaatggaccaatacttaacaa 4466171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 304 - 450
Target Start/End: Original strand, 38664346 - 38664492
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    ||||||||||||||||||  | |||| |||||| ||||||||| |||||||  ||||||||||||||||| |||||||  |||||| | |||||||||||    
T  38664346 caaaataattgagtcattttattttttaatacaatattaattatttttttctttttataactctaattaatactactttcatcattcctaattcaatata 38664445  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||| | ||| |||||||||||||||||||||||||  ||||||||||    
T  38664446 ttcaattttgcatttatgatagtagagaatgcaccggtacttaacaa 38664492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 17342773 - 17342937
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||| ||| |||||||||||||| ||||||||||| ||||  | |||||||||||||||| |||||||  |||| |  ||||||||||||    
T  17342773 caaaataactgagttatttcacttttcaatacaatattaattactattttttcattataactctaattaatactacttttatcactctcaattcaatata 17342872  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    || ||||||  |||||||||| | |||||||||||||||||||||||   |||||||||| ||||    
T  17342873 tttcactttgtatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccattt 17342937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 304 - 468
Target Start/End: Complemental strand, 17724877 - 17724713
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||||||||||||| || ||||||||||| ||||||||| |||  ||  ||||||||||||||||| |||| ||  |||| | ||||||||||| |    
T  17724877 caaaataattgagtcatttcatttttcaatacaatattaattattttaatctttttataactctaattaatactattttcatcactcccaattcaataaa 17724778  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||| ||||| |||||||| |||| ||||||||| ||||| |||||||| ||||||||||| ||||    
T  17724777 ttctactttgcatttatggtagtggagaatgcatcaataattaacaagagcacttaaaacaattt 17724713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 304 - 462
Target Start/End: Original strand, 36784259 - 36784417
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||||| | ||||||||| ||||||| | || ||  |  | ||| |||||||||||    
T  36784259 caaaataactgagtcatttcacttttcaatacaatattaattactttttttcatttataactataattaatattattttcacaacttcaaattcaatata 36784358  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    || |||||| ||||||||||||| || ||||||| ||||||||||||| |||| |||||    
T  36784359 tttcactttgcatttatgatagtggaaaatgcacaaatacttaacaagagcacctaaaa 36784417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 324 - 462
Target Start/End: Original strand, 52432277 - 52432415
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgat 423  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||||||   |||||  |  | || |||||||||||||| ||||||||||||||| |    
T  52432277 acttttcaatacaatattaattactttttttcttttataactctaattaatgttactttcacaacttacaattcaatatatttcactttacatttatggt 52432376  T
Q  424 agtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    |||| |||||||| |||||||||||||| ||||||||||    
T  52432377 agtaaagaatgcatcaatacttaacaagagcacttaaaa 52432415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 5040742 - 5040574
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| |||||||| |||||||| ||||||| |||||| |||||||| |||||||||||||| |||| ||||||  |||| ||  |||| | | |||||||    
T  5040742 gtcctaaaataatagagtcatttcactttttaatacaatattaattgcttttttccctttacaactttaattattactattttcatcactcctaattcaa 5040643  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||| |||||  ||||||||||||| ||||||||| ||||||||||||||  ||| |||||| ||||    
T  5040642 tatatttcacttcgcatttatgatagtggagaatgcatcaatacttaacaagatcacctaaaaccattt 5040574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 5442286 - 5442449
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||  ||| |||||||||||| |  ||||||||||||||||| ||||||||| ||||||| | |||||  |  | |||||||||||||||    
T  5442286 caaaataactgagctatttcacttttcaatataa-attaattacttttttccttttataactataattaatattactttcacaacttccaattcaatata 5442384  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||| ||||||||||||| |||||||||| |||||||||||||   ||||||||| ||||    
T  5442385 ttccactttgcatttatgatagtggagaatgcactaatacttaacaagataacttaaaaccattt 5442449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 43895792 - 43895956
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||||| | ||||| |||||||||||| | || ||  || | |  ||||||||||||    
T  43895792 caaaataaatgagtcatttcacttttcaatacaatattaattactttttcctctttacaactctaattaatattatttttattactctcaattcaatata 43895891  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||| ||||| ||||||||||||| |||||  ||||||||||||||||   ||| |||||||||||    
T  43895892 ttcaactttgcatttatgatagtggagaacacaccaatacttaacaaaaacacataaaactattt 43895956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 46495963 - 46496127
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||||||| || |||||||||||  |||||||| |||||| ||||||||||||||||||| |||||||  ||||   | |||||||||||    
T  46495963 caaaataagtgagtcatttcatttttcaatacatcattaattattttttttcctttataactctaattaatactactttcatcacgcctaattcaatata 46496062  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||| ||||||||||| | |||||| || |||| |||||||||  |||| ||||| ||||    
T  46496063 ttccactttgcatttatgataatggagaatacatcaatccttaacaagaacactcaaaaccattt 46496127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 468
Target Start/End: Original strand, 27831804 - 27831955
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttata-actctaattaacactacttaaatcatttccaattcaatatattccactttacat 416  Q
    |||| ||||||||||| ||  ||||||||| |||||||  ||||| ||||||||||| |||||||  |||| | |||||||||||| ||||||||| |||    
T  27831804 catttcacttttcaatgcaacattaattacctttttccaattatacactctaattaatactactttcatcactcccaattcaatatcttccactttgcat 27831903  T
Q  417 ttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||| | | |||||||||||||||| ||||| ||||||||||||||||    
T  27831904 ttatgataatggtgaatgcaccaatacttgacaagggcacttaaaactattt 27831955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 300 - 451
Target Start/End: Original strand, 29225694 - 29225845
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||  |||||  |||| |||||||||||||| || |||||||||||||||  |||||||||||||||| |||||||  |||| | |||||||||    
T  29225694 gtcccaaaaagattgacccatttcacttttcaatacaataataattacttttttccaattataactctaattaatactactttcatcactcccaattcaa 29225793  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    ||||||| ||||| |||||||||||  |  |||||||||||||||| |||||    
T  29225794 tatattctactttgcatttatgataagaatgaatgcaccaatacttgacaag 29225845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 300 - 424
Target Start/End: Complemental strand, 2219614 - 2219491
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||||||||||  |||| |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| |  |  | |||||||||||    
T  2219614 gtcccaaaataattgaaccatttcacttttcaatacaatattaattact-ttttccctttataactctaattaatactacgttcacaacttccaattcaa 2219516  T
Q  400 tatattccactttacatttatgata 424  Q
    ||||||  |||||||||||||||||    
T  2219515 tatattttactttacatttatgata 2219491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 11426036 - 11425868
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||| ||||||||| |||||| ||||||| |||||||||||||||| |  |||||||| ||||||| |||||||  |  | ||||||| |||    
T  11426036 gtcctaaaataactgagtcatttcactttccaatacaatattaattactttttttcaattataactttaattaatactactttcactacttccaatacaa 11425937  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||| |||||||||||||||||    |||||| |||||||||||||||   |||| ||||||||||    
T  11425936 tatattctactttacatttatgataaagaagaatggaccaatacttaacaaagacactcaaaactattt 11425868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 28908037 - 28908190
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||| |||||| |||||||||||||||| || |||||||  |||| |  |||||||||||    
T  28908037 ccaaaataattgagtcatttcactttttaatacggtattaattattttttttcctttataactctaataaatactactttcatcactatcaattcaatat 28908136  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    |||| ||      |||| |||||| |||||||||| ||||||||||||| | ||||||||    
T  28908137 attctac------tttaagatagtggagaatgcactaatacttaacaagagtacttaaaa 28908190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 305 - 468
Target Start/End: Original strand, 16040023 - 16040186
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||||||||| |||||| ||||||| |||||||||||||||| |  |||||||||||| ||| | |||||  | || ||||||| ||||||||    
T  16040023 aaaataactgagtcatttcactttccaatacaatattaattactttttttcaattataactctaaataatattactttcaccacttccaatacaatatat 16040122  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    || |||||||||||||||||    |||||| |||||||||||||||   |||||||||| ||||    
T  16040123 tctactttacatttatgataaagaagaatgaaccaatacttaacaaagacacttaaaaccattt 16040186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 468
Target Start/End: Complemental strand, 34877251 - 34877089
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||| |||||  ||||||||||||| ||||||||||||||| | | |||||||||||||||| | || ||  |||| |  |||||||||||||    
T  34877251 aaaataactgaatcattttacttttcaatacaatattaattacttttt-ctcattataactctaattaatattattttcatcactcacaattcaatatat 34877153  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    || ||||| ||||||||||| |||| ||||||| |||| ||||| || ||||||||||| ||||    
T  34877152 tcaactttgcatttatgataatagaaaatgcacgaatatttaaccagagcacttaaaacaattt 34877089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 326 - 445
Target Start/End: Complemental strand, 36232930 - 36232811
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    ||||||||| |  |||||||||||||||||  |||||||||||||||| |||||||  | ||||||||||||||||||||| |||||| ||||||||||     
T  36232930 ttttcaataaaacattaattacttttttccaattataactctaattaatactactttcaccatttccaattcaatatattctactttatatttatgataa 36232831  T
Q  426 tagagaatgcaccaatactt 445  Q
       |||||||||||||||||    
T  36232830 agaagaatgcaccaatactt 36232811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 468
Target Start/End: Complemental strand, 12267786 - 12267630
Alignment:
Q  312 ttgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactt 411  Q
    |||| ||||| |||||||||||||   |||||||||||||||||  ||||||||||| |||| |||||||  |  | | |||||||||||||||| ||||    
T  12267786 ttgactcatttcacttttcaatacgacattaattacttttttccaattataactctagttaatactactttcacaactcccaattcaatatattctactt 12267687  T
Q  412 tacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||    |||||| |||||||||| | || |||||| ||||||||||    
T  12267686 tacatttatgataaagaagaatgtaccaatacttgaaaaatgcactcaaaactattt 12267630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 330 - 450
Target Start/End: Complemental strand, 29225544 - 29225425
Alignment:
Q  330 caatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtaga 429  Q
    ||||||| ||||||||||||||||||  ||||||||| ||| || |||||||  | || |||||||||||||||||| ||||| |||||||||||  | |    
T  29225544 caatacaatattaattacttttttccaattataactcaaat-aatactactttcaccacttccaattcaatatattctactttccatttatgataaaaaa 29225446  T
Q  430 gaatgcaccaatacttaacaa 450  Q
    |||||||||||||||||||||    
T  29225445 gaatgcaccaatacttaacaa 29225425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 468
Target Start/End: Complemental strand, 3719010 - 3718848
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||| ||||| ||||||||||| || ||||||||| ||||||||   ||||||||||||||| ||||| |  |||| |  |||||||||||||    
T  3719010 aaaataagtgactcatttcacttttcaatgcaatattaatta-ttttttccaactataactctaattaatactaccttcatcactctcaattcaatatat 3718912  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |  ||||||||||||||||| |    ||||||| ||||||| ||||| ||||||||||||||||    
T  3718911 tatactttacatttatgataatgataaatgcacaaatacttgacaagagcacttaaaactattt 3718848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 305 - 468
Target Start/End: Original strand, 7787623 - 7787771
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| |||| |||| || ||||| ||||| ||||||||||||||| |||||||||||| ||||||| |||| ||  |||||||||                
T  7787623 aaaataactgagccatttcatttttcgatacaatattaattactttttcccctttataactataattaatactatttccatcatttcc------------ 7787710  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
       ||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  7787711 ---actttacatttatgatagtggagaatacaccaatacttaacaagtgtacttaaaactattt 7787771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 447
Target Start/End: Original strand, 46880364 - 46880503
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||||||| ||||||||||||||   ||||||| |||||||  ||||||||||||| ||| | |||||  ||||| || |||| ||||||    
T  46880364 caaaataactgagtcatttcacttttcaataca---ttaattatttttttcattttataactctaactaatattactttcatcatctc-aatttaatata 46880459  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaa 447  Q
    ||| ||||||||||||||||||| |||||  |||| ||||||||    
T  46880460 ttcaactttacatttatgatagtggagaagacaccgatacttaa 46880503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 370 - 453
Target Start/End: Original strand, 5563025 - 5563107
Alignment:
Q  370 ttaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtg 453  Q
    |||| |||||||  ||||||||||||||||||| ||||||||||||||||||||| | |||||||||| |||||||||||||||    
T  5563025 ttaatactactttcatcatttccaattcaatatgttccactttacatttatgataat-gagaatgcacaaatacttaacaagtg 5563107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 412
Target Start/End: Original strand, 11324194 - 11324301
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||| ||||| ||||||||||||||  ||||| ||||||||||||||||||||| ||||||| ||||| |  |||| |  |||||||||||||    
T  11324194 aaaataactgaatcatttcacttttcaatacatcattaactacttttttccctttataactataattaatactacattcatcactctcaattcaatatat 11324293  T
Q  405 tccacttt 412  Q
    ||||||||    
T  11324294 tccacttt 11324301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 412
Target Start/End: Original strand, 11482215 - 11482322
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||| ||||| ||||||||||||||  ||||| ||||||||||||||||||||| ||||||| ||||| |  |||| |  |||||||||||||    
T  11482215 aaaataactgaatcatttcacttttcaatacatcattaactacttttttccctttataactataattaatactacattcatcactctcaattcaatatat 11482314  T
Q  405 tccacttt 412  Q
    ||||||||    
T  11482315 tccacttt 11482322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 358 - 468
Target Start/End: Original strand, 25842598 - 25842707
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcact 457  Q
    |||||||| |||||||||||||||  ||||||  |||| |||||||||| ||||||||||||||||| |||| |||| |||||||||||| |||  ||||    
T  25842598 ttataactataattaacactactttcatcattctcaatgcaatatattctactttacatttatgataatagaaaatgtaccaatacttaataag-acact 25842696  T
Q  458 taaaactattt 468  Q
     ||||||||||    
T  25842697 caaaactattt 25842707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 424
Target Start/End: Original strand, 2886135 - 2886236
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    |||||||||||||| ||||||||||||||||||  ||||||| |||||||| |||||||  | || |  ||||||||||||||| ||||| |||||||||    
T  2886135 cacttttcaatacaatattaattacttttttccaattataacactaattaatactactttcaccactctcaattcaatatattctactttgcatttatga 2886234  T
Q  423 ta 424  Q
    ||    
T  2886235 ta 2886236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 358 - 462
Target Start/End: Complemental strand, 13500838 - 13500734
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcact 457  Q
    |||||| ||||||||| |||||||  | || | |||||||||||| ||||||||| |||||||||||||  ||||||||||||||| ||||||  |||||    
T  13500838 ttataattctaattaatactactttcagcactcccaattcaatattttccactttgcatttatgatagtgaagaatgcaccaatacataacaaaagcact 13500739  T
Q  458 taaaa 462  Q
    |||||    
T  13500738 taaaa 13500734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 300 - 424
Target Start/End: Complemental strand, 24131567 - 24131443
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||| || |||||| | ||| ||||||||||| || ||||||||||||||||||  ||||||| |||||||| |||||||  | || | |||||||||    
T  24131567 gtcccagaaaaattgacttatttcacttttcaatgcaatattaattacttttttccaattataacactaattaatactactttcaccactcccaattcaa 24131468  T
Q  400 tatattccactttacatttatgata 424  Q
    ||||||  ||||| |||||||||||    
T  24131467 tatattatactttgcatttatgata 24131443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 468
Target Start/End: Complemental strand, 10370349 - 10370184
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactact----taaatcatttccaattcaat 400  Q
    ||||||| ||||  ||| |||||| ||||||| ||||||||| |||||||||||||||||||||||||| | ||||    | | ||||  | ||||||||    
T  10370349 aaaataactgagctatttcactttccaatacaatattaattatttttttccctttataactctaattaatattactttcatcactcatacctaattcaat 10370250  T
Q  401 atattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||  | ||||| |||||||||| ||  ||||||||  ||||||||||||  ||||||||||||||||    
T  10370249 ata--ctactttgcatttatgatggtgaagaatgcattaatacttaacaaaagcacttaaaactattt 10370184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 442
Target Start/End: Complemental strand, 29756293 - 29756167
Alignment:
Q  318 cattccacttttcaatacagtattaattactttttt--ccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttaca 415  Q
    |||| |||||||||||||| ||||||||||||||||  ||  ||||||| |||||||| |||||||  | || | |||||||||||||||| ||||| ||    
T  29756293 catttcacttttcaatacaatattaattacttttttttccaattataacactaattaatactactttcaccactcccaattcaatatattctactttgca 29756194  T
Q  416 tttatgatagtagagaatgcaccaata 442  Q
    |||||||||    ||||||||||||||    
T  29756193 tttatgataaagaagaatgcaccaata 29756167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 468
Target Start/End: Original strand, 30749965 - 30750040
Alignment:
Q  393 aattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||| ||||||| |||||||||||||||||||| || ||||| |||||||  ||||||||||||||||    
T  30749965 aattcaatatataccactttgcatttatgatagtagagaatacatcaatatttaacaaaagcacttaaaactattt 30750040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 468
Target Start/End: Original strand, 30771416 - 30771491
Alignment:
Q  393 aattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||| ||||||| |||||||||||||||||||| || ||||| |||||||  ||||||||||||||||    
T  30771416 aattcaatatataccactttgcatttatgatagtagagaatacatcaatatttaacaaaagcacttaaaactattt 30771491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 373
Target Start/End: Original strand, 6784947 - 6785017
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  6784947 ccaaaataattgaatcatttcacttttcaatacaatattaattactttttttcttttatatctctaattaa 6785017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 442
Target Start/End: Original strand, 26583673 - 26583811
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    ||||| ||||||  |||| |||||||||||||| ||||||||||||| ||||  ||||||| |||||||| | || ||  |||| | |||||||||||||    
T  26583673 caaaaaaattgacccatttcacttttcaatacaatattaattactttattccaattataacactaattaataatattttcatcactcccaattcaatata 26583772  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaata 442  Q
    ||| | ||| |||||||||||    ||||||||||||||    
T  26583773 ttctattttgcatttatgataaagaagaatgcaccaata 26583811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 451
Target Start/End: Complemental strand, 30903376 - 30903243
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||| || ||||||||| ||||||||  |||||||||||||||| | || ||  |||| | |   |||||||||||| ||||| ||||    
T  30903376 catttcacttttcaattcaatattaattatttttttccaattataactctaattaatattattttcatcactcctgtttcaatatattctactttgcatt 30903277  T
Q  418 tatgatagtagagaatgcaccaatacttaacaag 451  Q
    ||||||| | || ||||||| |||||||||||||    
T  30903276 tatgataatggaaaatgcacaaatacttaacaag 30903243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 32347885 - 32347958
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    ||||||| |||| ||||  ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  32347885 gtcccaatataagtgagctatttcacttttcaatacatcattaattacttttttccctttataactctaattaa 32347958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 391 - 468
Target Start/End: Original strand, 32348250 - 32348327
Alignment:
Q  391 ccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||||||||| ||||| ||||||| || |||  |||||||||||||||| ||||||||||| ||||    
T  32348250 ccaattcaatatattccactttgcatttgtgatagtggaaaatagaccaatacttaacaagagcacttaaaaccattt 32348327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 450
Target Start/End: Complemental strand, 18186362 - 18186223
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccac 409  Q
    |||||| ||||| |||||||||||||| ||||| |||||||||| |  |||||||||||||||| |||||||  | || | |||||||| ||||||  ||    
T  18186362 aattgactcatttcacttttcaatacaatatta-ttactttttttcaattataactctaattaatactactttcaccactcccaattcagtatattttac 18186264  T
Q  410 tttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
     ||| ||||||||||  | |||||||  |||||||||||||    
T  18186263 attatatttatgataaaaaagaatgcgtcaatacttaacaa 18186223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 27391374 - 27391450
Alignment:
Q  386 catttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||  |||| |||||||||||| ||| ||||||||||    
T  27391374 cattttcaattcaatatattccactttgcatttatgataatagtaaatgaaccaatacttaataagagcacttaaaa 27391450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 468
Target Start/End: Original strand, 2571323 - 2571471
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||||||  | |||||||||||| ||   |||||||||| |||| |||||||  |||| |  ||||||||||||||| ||||| ||||    
T  2571323 catttcacttttcaatacaacaataattacttttt-ccaaatataactctagttaatactactttcatcactctcaattcaatatattctactttgcatt 2571421  T
Q  418 tatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    || ||||  | | |||||||||||||||||||||  |||| ||||||||||    
T  2571422 taggataagaaataatgcaccaatacttaacaag-acactcaaaactattt 2571471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 468
Target Start/End: Original strand, 34813917 - 34814026
Alignment:
Q  359 tataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcactt 458  Q
    ||||| |||||| || |||||||  ||||||  ||||||||||||||| ||||| ||||||||||| |    ||||||| |||||||||||||  |||||    
T  34813917 tataattctaatgaatactactttcatcattctcaattcaatatattctactttgcatttatgataatgataaatgcactaatacttaacaagaacactt 34814016  T
Q  459 aaaactattt 468  Q
    ||||||||||    
T  34814017 aaaactattt 34814026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 424
Target Start/End: Complemental strand, 37925389 - 37925289
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgat 423  Q
    ||||||||||||| |||||||||||||||| |  ||||||| |||||||| | |||||  | || |  ||||||||||||||| ||||| ||||||||||    
T  37925389 acttttcaatacaatattaattactttttttcaattataacactaattaatattactttcaccactctcaattcaatatattctactttgcatttatgat 37925290  T
Q  424 a 424  Q
    |    
T  37925289 a 37925289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 447
Target Start/End: Complemental strand, 705516 - 705369
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||| ||||||   ||| |||||||||||| | ||||||||| ||||||||   ||||||||||||||| | |||||  | || |  ||||||||    
T  705516 gtcccaaaagaattgatctatttcacttttcaatataatattaattatttttttccaaatataactctaattaatattacttttaccactctcaattcaa 705417  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaa 447  Q
    ||||||  ||||||||| |||||||    ||||||||| |||||||||    
T  705416 tatattatactttacatctatgataaagaagaatgcactaatacttaa 705369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 381
Target Start/End: Original strand, 30749722 - 30749777
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactactt 381  Q
    ||||||||||| ||||||||||||||||| ||||||||||||| |||| |||||||    
T  30749722 ttttcaatacaatattaattacttttttctctttataactctagttaatactactt 30749777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 381
Target Start/End: Original strand, 30771173 - 30771228
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactactt 381  Q
    ||||||||||| ||||||||||||||||| ||||||||||||| |||| |||||||    
T  30771173 ttttcaatacaatattaattacttttttctctttataactctagttaatactactt 30771228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 468
Target Start/End: Original strand, 32587763 - 32587874
Alignment:
Q  357 tttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcac 456  Q
    ||||||||||||||||| | || ||  |||| |  |||||||||||||| |||||| ||||||||||| | || |||||| |||||||||||||   |||    
T  32587763 tttataactctaattaataataatttcatcactctcaattcaatatatttcactttgcatttatgataatggaaaatgcatcaatacttaacaaaaacac 32587862  T
Q  457 ttaaaactattt 468  Q
    |||||| |||||    
T  32587863 ttaaaattattt 32587874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 450
Target Start/End: Complemental strand, 37281073 - 37281014
Alignment:
Q  391 ccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    |||||||||||||||| |||||||||||||||||  | ||||||||||||||||| ||||    
T  37281073 ccaattcaatatattctactttacatttatgataaaaaagaatgcaccaatacttgacaa 37281014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 305 - 403
Target Start/End: Original strand, 49944737 - 49944833
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||  |||||||| ||| |||||||||| |||||||||||||||| | ||||||||||||||||| || ||||  |||| | |||||||||||||    
T  49944737 aaaataaccgagtcatttcacctttcaatacaatattaattactttttt-cttttataactctaattaatac-actttcatcactaccaattcaatata 49944833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 424
Target Start/End: Complemental strand, 10587717 - 10587624
Alignment:
Q  331 aatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    |||||| |||||||||||||||||   ||||||| |||||||| |||||||  |||| |  ||||||||||||||| | ||| |||||||||||    
T  10587717 aatacaatattaattacttttttctaattataacactaattaatactactttcatcactctcaattcaatatattctattttgcatttatgata 10587624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 462
Target Start/End: Original strand, 21304418 - 21304487
Alignment:
Q  393 aattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    ||||||||||||| |||||| ||||||||||||| ||||||||||  |||| |||||||  |||||||||    
T  21304418 aattcaatatatttcactttgcatttatgatagtcgagaatgcactgatacataacaagatcacttaaaa 21304487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 447
Target Start/End: Original strand, 25869645 - 25869771
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaa---atcatttccaattcaatatattccactttacattta 419  Q
    |||||||||||||| || |||||  |||||||  || |||||| |||||||||||| |||    ||||||  |||| |||||||||| ||||||||||||    
T  25869645 cacttttcaatacaataataattttttttttcaatt-ataactataattaacactatttacttcatcattctcaatgcaatatattctactttacattta 25869743  T
Q  420 tgatagtagagaatgcaccaatacttaa 447  Q
    ||||| |||| |||| | ||||||||||    
T  25869744 tgataatagaaaatgtatcaatacttaa 25869771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 424
Target Start/End: Original strand, 31798382 - 31798483
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    |||||||||||| | ||||||||||||||||||  ||||||| |||||||| | |||||  |  | |  ||||||||||||||| ||||| |||||||||    
T  31798382 cacttttcaatataatattaattacttttttccaattataacactaattaatattactttcactactctcaattcaatatattctactttgcatttatga 31798481  T
Q  423 ta 424  Q
    ||    
T  31798482 ta 31798483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 424
Target Start/End: Original strand, 33149238 - 33149338
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    ||||||||||| || |||||||||||||||||  |  ||||| |||||||| |||||||  |||| |  ||||||||||||||| ||||| |||||||||    
T  33149238 cacttttcaatgcaatattaattacttttttcaata-ataacactaattaatactactttcatcactctcaattcaatatattctactttgcatttatga 33149336  T
Q  423 ta 424  Q
    ||    
T  33149337 ta 33149338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 420
Target Start/End: Complemental strand, 35622946 - 35622826
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagta-ttaattacttttttccctttataactctaattaacactacttaaatcatttccaattca 398  Q
    ||||||||| ||||||  |||| |||| ||||||||| || ||||||  |||||||  || |||||||||||||| |||||||  || ||| ||||||||    
T  35622946 gtcccaaaaaaattgacacatttcactcttcaatacaataattaattttttttttcaatt-ataactctaattaatactactttcataattgccaattca 35622848  T
Q  399 atatattccactttacatttat 420  Q
    |||||||| ||||| |||||||    
T  35622847 atatattctactttgcatttat 35622826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 442
Target Start/End: Complemental strand, 37541261 - 37541138
Alignment:
Q  323 cacttttcaatacagtattaattact--tttttccctttataactctaattaaca--ctacttaaatcatttccaattcaatatattccactttacattt 418  Q
    |||||||||||||| |||||||||||  |||||||  |||||||  ||||||| |  ||||||  | || |||||||||||||||||| |||||||||||    
T  37541261 cacttttcaatacaatattaattactactttttccaattataacattaattaatatactactttcaccacttccaattcaatatattctactttacattt 37541162  T
Q  419 atgatagtagagaatgcaccaata 442  Q
    || |||    ||||||||||||||    
T  37541161 ataataaagaagaatgcaccaata 37541138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 450
Target Start/End: Original strand, 42926168 - 42926225
Alignment:
Q  393 aattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||||||||||||| || ||| ||||||||||||| ||||||||||| |||||||||||    
T  42926168 aattcaatatatttcattttgcatttatgatagtggagaatgcaccgatacttaacaa 42926225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 468
Target Start/End: Original strand, 6787288 - 6787356
Alignment:
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||||||||||| || |||| || |||| ||||||| | || ||||||||||||    
T  6787288 tatattccactttacatttatgatagtggataatgtactaatatttaacaaatacatttaaaactattt 6787356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 437
Target Start/End: Original strand, 51049455 - 51049586
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||||||||  ||| ||||||| |||||| ||||||||||||||||   ||||||| |  |||||| |||||||  |  | | ||||||||||||||    
T  51049455 aaaataattgagctatttcactttttaatacaatattaattactttttt-tatttataatttaaattaatactactttcacaactcccaattcaatatat 51049553  T
Q  405 tccactttacatttatgatagtagagaatgcac 437  Q
    |  |||||||||||||||||  | |||||||||    
T  51049554 tatactttacatttatgataaaaaagaatgcac 51049586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 434
Target Start/End: Complemental strand, 948695 - 948620
Alignment:
Q  359 tataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatg 434  Q
    ||||||||||||||| ||||  |  |||| ||  |||||||||||||||||||| ||||||||||||| |||||||    
T  948695 tataactctaattaatactatcttcatcactttgaattcaatatattccactttgcatttatgatagtggagaatg 948620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 381
Target Start/End: Original strand, 16451590 - 16451653
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactactt 381  Q
    |||| ||||||||||||||  |||||||||||||||||  |||||||| ||||||| |||||||    
T  16451590 catttcacttttcaatacaacattaattacttttttccaattataactttaattaatactactt 16451653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 381
Target Start/End: Original strand, 16460743 - 16460806
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactactt 381  Q
    |||| ||||||||||||||  |||||||||||||||||  |||||||| ||||||| |||||||    
T  16460743 catttcacttttcaatacaacattaattacttttttccaattataactttaattaatactactt 16460806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 417
Target Start/End: Original strand, 37525031 - 37525109
Alignment:
Q  338 tattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    ||||||| | |||||| ||||||||||||||||||| |||| ||   |||||| ||||||||||||||||||||| ||||    
T  37525031 tattaatgattttttttcctttataactctaattaatacta-tttcgtcattttcaattcaatatattccacttttcatt 37525109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 416
Target Start/End: Complemental strand, 20988623 - 20988533
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacat 416  Q
    |||||||||||  ||||||||||||||| |  |||||||||||||||| | || ||  | || | |||||||||||||||| |||||||||    
T  20988623 ttttcaatacaacattaattactttttttcaattataactctaattaatattattttcaccactcccaattcaatatattctactttacat 20988533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 445
Target Start/End: Complemental strand, 27210110 - 27209989
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    ||||||| ||||||  |||||||| ||||||||  |||||||||||||||| |||  ||  | || |  |||||||||||||||  ||||||||||||||    
T  27210110 cacttttgaatacaacattaatta-ttttttccaattataactctaattaatactcttttcaccactctcaattcaatatattctcctttacatttatga 27210012  T
Q  423 tagtagagaatgcaccaatactt 445  Q
    ||    |||||||||||||||||    
T  27210011 taaagaagaatgcaccaatactt 27209989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 26760098 - 26760171
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    |||||| || |||||| ||||| |||||||||||||| |||||||||| ||||| |  ||||||| ||||||||    
T  26760098 gtcccagaaaaattgattcatttcacttttcaatacaatattaattacattttttcaattataacactaattaa 26760171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 26924436 - 26924363
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    |||||| || |||||| ||||| |||||||||||||| |||||||||| ||||| |  ||||||| ||||||||    
T  26924436 gtcccagaaaaattgattcatttcacttttcaatacaatattaattacattttttcaattataacactaattaa 26924363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 407 - 468
Target Start/End: Original strand, 49944980 - 49945041
Alignment:
Q  407 cactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||| ||||||||||||   ||||||||| ||||||||||||| ||||||||||| ||||    
T  49944980 cactttgcatttatgatagagaagaatgcacaaatacttaacaagagcacttaaaaccattt 49945041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 445
Target Start/End: Complemental strand, 52382528 - 52382408
Alignment:
Q  326 ttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    |||||||||||  |||||||||||||||  |  |||||||||||||||| | |||||  | || |  ||||||||||||||  |||||||||||||||||    
T  52382528 ttttcaatacaacattaattacttttttttcaattataactctaattaatattactttcaccactctcaattcaatatattttactttacatttatgata 52382429  T
Q  425 gtagagaatgcaccaatactt 445  Q
        |||||||| ||||||||    
T  52382428 aagaagaatgcatcaatactt 52382408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 373
Target Start/End: Complemental strand, 27143336 - 27143290
Alignment:
Q  327 tttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    ||||||||||  |||||||||||||||||  ||||||||||||||||    
T  27143336 tttcaatacaagattaattacttttttccaattataactctaattaa 27143290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 450
Target Start/End: Original strand, 29678859 - 29678917
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||||||||||||||| ||||| |||||| |||| ||  ||||||| |||||||||||||    
T  29678859 caattcaatatattcaactttgcatttacgataataatgaatgcatcaatacttaacaa 29678917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 373
Target Start/End: Complemental strand, 35705329 - 35705259
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    ||||||||||||| | ||| || |||||||| || | |||||||||||||||   ||||||||||||||||    
T  35705329 ccaaaataattgacttatttcatttttcaatgcaatgttaattacttttttctaattataactctaattaa 35705259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 445
Target Start/End: Original strand, 37495861 - 37495915
Alignment:
Q  391 ccaattcaatatattccactttacatttatgatagtagagaatgcaccaatactt 445  Q
    |||||||||||||||| ||||||||||||| |||    |||||||||||||||||    
T  37495861 ccaattcaatatattctactttacatttataataaagaagaatgcaccaatactt 37495915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 468
Target Start/End: Original strand, 40019727 - 40019868
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    ||||||||| | |||| ||||||||||||  || |||||||||||||| | |||||  |||| |   |||||||||| || ||||||   |||||||||     
T  40019727 ttttcaatataatattgattacttttttcaatt-ataactctaattaatattactttcatcactctgaattcaatatttttcactttgtctttatgataa 40019825  T
Q  426 tagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    | | |||| ||| ||||||| ||||| ||||||||||| ||||    
T  40019826 tggtgaatacacaaatacttgacaagagcacttaaaacaattt 40019868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 424
Target Start/End: Original strand, 40061776 - 40061874
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    |||||||| || ||||||||||||||||    |||||| ||||||||| | |||||  |||| |  ||||||||||||||| | ||| |||||||||||    
T  40061776 ttttcaatgcaatattaattactttttttaaattataattctaattaatattactttcatcactctcaattcaatatattctaatttgcatttatgata 40061874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 402
Target Start/End: Original strand, 42309397 - 42309475
Alignment:
Q  325 cttttcaatacagtattaattacttttttccc-tttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    |||||||||||| ||||||||||||||||    ||||||||||||||||| |||||||  |||||| | |||| |||||    
T  42309397 cttttcaatacaatattaattactttttttttatttataactctaattaatactactttcatcattccaaatttaatat 42309475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 50333894 - 50334000
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| |||||| ||||| |  |||||||||||||||    |||||||||||||||| | |||||  | || |  |||||||||||| || ||||||||||    
T  50333894 catttcactttccaatataacattaattacttttttttaattataactctaattaataatactttcaccactctcaattcaatatactctactttacatt 50333993  T
Q  418 tatgata 424  Q
    |||||||    
T  50333994 tatgata 50334000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 1859453 - 1859502
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttc 354  Q
    |||| |||||| ||||| |||||||||||||| ||||||||| |||||||    
T  1859453 aaaaaaattgactcatttcacttttcaatacaatattaattatttttttc 1859502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 52146822 - 52146741
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccct-----ttataactctaattaacactactt 381  Q
    |||| |||||| |||||  ||||||||||||| ||||||||||||||||  ||     |||||||||||||||| |||||||    
T  52146822 aaaaaaattgactcatttaacttttcaatacaatattaattacttttttttctttcaattataactctaattaatactactt 52146741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 450
Target Start/End: Original strand, 14352565 - 14352657
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    |||||||| ||||||| | |||||  | || | |||||||||||||||| |||||| ||||| ||||    ||||||||||||||||| ||||    
T  14352565 ttataactgtaattaatattactttcaccactcccaattcaatatattctactttatatttacgataaagaagaatgcaccaatacttgacaa 14352657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 26040599 - 26040709
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattcaatatattc---cacttta 413  Q
    |||| ||||||||||||    ||||||||||||||| ||  |||||||||||||||| ||| |||  | || |||||| |||||||||||    ||||||    
T  26040599 catttcacttttcaatattacattaattactttttttccaattataactctaattaatactgcttccaccacttccaagtcaatatattctagtacttta 26040698  T
Q  414 catttatgata 424  Q
    |||||||||||    
T  26040699 catttatgata 26040709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 468
Target Start/End: Original strand, 50926788 - 50926856
Alignment:
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||| |||||||||||||||||    ||||||||||||||||| |||| |||| | ||||| ||||    
T  50926788 tatattctactttacatttatgataaagaagaatgcaccaatacttgacaaatgcattcaaaaccattt 50926856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 2e-56; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 305 - 468
Target Start/End: Original strand, 30462962 - 30463125
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||||||||||||| |||||||| ||||| ||||||| |||||||||| ||||||||||||||||| | |||||  ||||||| |||||||||||||    
T  30462962 aaaataattgagtcatttcacttttccatacaatattaatgacttttttccttttataactctaattaatattactttcatcattttcaattcaatatat 30463061  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  30463062 tccattttacatttatgattgtggagaatgcaccaatacttaacaagtgcacttaaaactattt 30463125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 305 - 468
Target Start/End: Complemental strand, 31581604 - 31581441
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||  ||||||| |||||||||||||    
T  31581604 aaaataactgagtcatttcacttttcaatacaatattaattacttttttccatttataactctaattaatactactttcatcattttcaattcaatatat 31581505  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||| ||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||    
T  31581504 tccattttacatttatgatattggagaatgcaccaatacttaacaaatgtacttaaaactattt 31581441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 34963977 - 34963806
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||  ||||||  ||||| ||    
T  34963977 gtcccaaaataactgagtcatttcacttttcaatacagtattaattacttttttccctttataactctaattaatattactttcatcattctcaattaaa 34963878  T
Q  400 tatattccactttacatttatgatagt---agagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||| ||||||||||||||||||||   |||||||||||||||| ||||||||| |||||||||||||||    
T  34963877 tatatttcactttacatttatgatagtgaaagagaatgcaccaatatttaacaagttcacttaaaactattt 34963806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 2846842 - 2846674
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| ||||||||| ||||||||||||||  ||||||||||||||||| ||||||||||||||||| |||||||  |||| |||||||||||    
T  2846842 gtcccaaaataagtgagtcatttcacttttcaatacatcattaattacttttttccttttataactctaattaatactactttcatcaattccaattcaa 2846743  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||  |||||||||||| ||||||  |||||||||||||||| ||||||||||||||||    
T  2846742 tatattccactttgaatttatgatagtggagaatagaccaatacttaacaagagcacttaaaactattt 2846674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 305 - 468
Target Start/End: Original strand, 47453950 - 47454113
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    |||||||||||| |||| |||||||||||||| ||||||| | |||||||||||||||||| ||||||  |||||||  ||||||| ||| |||||||||    
T  47453950 aaaataattgagccatttcacttttcaatacaatattaatcatttttttccctttataactataattattactactttcatcatttacaaatcaatatat 47454049  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47454050 ttcactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactattt 47454113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 5724873 - 5724706
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| |||| |||| |||||||||||||| ||||||| |||||||| | ||||||||||||||||| |||||||   ||||||| |||||||    
T  5724873 gtcccaaaataagtgagccatttcacttttcaatacaatattaatcactttttttcttttataactctaattaatactactttcttcatttctaattcaa 5724774  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||| |||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  5724773 tatatttcactttacatttatgatagtggagaatgcactaatacttaacaag-gcacttaaaactattt 5724706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 11616502 - 11616671
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| |||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||  | || | |||||||||    
T  11616502 gtcccaaaataactgagccatttcacttttcaatacaatattaattacttttttccctttataactctaattaatacaactttcaccactcccaattcaa 11616601  T
Q  400 -tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
     ||||||||||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  11616602 ttatattccactttgcatatatgatagtggagaatgcaccaatacttaacaagagcacttaaaaccattt 11616671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 303 - 468
Target Start/End: Original strand, 36117606 - 36117771
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    |||||||||  | |||||| |||||||||||||| ||||||||| |||||||||||||||||| ||||||| |  ||||  ||||||| |||||||||||    
T  36117606 ccaaaataaccgtgtcatttcacttttcaatacaatattaatta-ttttttccctttataactttaattaatatcactttcatcattttcaattcaatat 36117704  T
Q  403 attccactttacatttatg-atagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||    
T  36117705 attccactttacatttatgaatagtggagaatgcacaaatacttaacaagtgcacttaaaactattt 36117771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 304 - 468
Target Start/End: Complemental strand, 29434742 - 29434578
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||||||| | |||| ||||||| ||||||||| ||||| |||||||||||||||||||| |||||||  ||||||  ||||||||||||    
T  29434742 caaaataactgagtcatttcgctttccaatacaatattaattattttttcccctttataactctaattaatactactttcatcattcacaattcaatata 29434643  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||| ||||||||| ||| |||||| ||||||||||||||||  ||||||||||||||||    
T  29434642 ttccactttgcatttatgaaagtggagaatccaccaatacttaacaaaagcacttaaaactattt 29434578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 7426045 - 7425875
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctt-tataactctaattaacactacttaaatcatttccaattca 398  Q
    |||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||| |||||||||| |||| |||||||  |  | ||||||||||    
T  7426045 gtcccaaaataactgagccatttcacttttcaatacaatattaattacttttttcccttatataactctagttaatactactttcacaacttccaattca 7425946  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatactt-aacaagtgcacttaaaactattt 468  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||| ||||||  |||||||||| ||||    
T  7425945 atatattccactttgcatttatgatagtggagaatgcaccaatacttaaacaagaacacttaaaaccattt 7425875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 305 - 468
Target Start/End: Original strand, 23703861 - 23704025
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagt-attaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    ||||||| ||| |||||  ||||| ||||||| | ||||||||||||||||| ||||||||||||||||| |||||||  ||||||| ||||||||||||    
T  23703861 aaaataactgaatcattttactttccaatacaattattaattacttttttccatttataactctaattaatactacttttatcattttcaattcaatata 23703960  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    || || ||||||||||||||||| ||||||||| ||||| ||||||||||| |||||||||||||    
T  23703961 tttcattttacatttatgatagtggagaatgcagcaataattaacaagtgcgcttaaaactattt 23704025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 29257488 - 29257656
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| ||||  ||| ||||||||||||||  ||||||||||||||||||||||||||||||||||| | |||||  |||| | |||||||||    
T  29257488 gtcccaaaataagtgagctatttcacttttcaatacatcattaattacttttttccctttataactctaattaatattactttcatcactcccaattcaa 29257587  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||| ||||||||||||| || |||  ||||||| |||||||| ||||||||||| ||||    
T  29257588 tatattccactttgcatttatgatagtggaaaatagaccaataattaacaagagcacttaaaaccattt 29257656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 33584508 - 33584672
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| |||| |||| ||||||| ||||||  ||||||||||||||||||||||||||| ||||||| |||||||  |||| | |||||||||||||    
T  33584508 caaaataactgagccatttcacttttgaatacatcattaattacttttttccctttataactataattaatactactttcatcactcccaattcaatata 33584607  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||| ||| ||||||||||| | |||||| ||||||||||||||||  ||||||||||| ||||    
T  33584608 ttccattttgcatttatgatactggagaatacaccaatacttaacaatagcacttaaaaccattt 33584672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 345 - 468
Target Start/End: Original strand, 48981642 - 48981765
Alignment:
Q  345 tacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatact 444  Q
    ||||||||| ||||||||| |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| || |||  ||||||||     
T  48981642 tactttttttcctttataattctaattaacactacttttatcatttccaatttaatatattccactttacatttatgatagtggataatataccaataca 48981741  T
Q  445 taacaagtgcacttaaaactattt 468  Q
    ||||||||||| ||||||||||||    
T  48981742 taacaagtgcatttaaaactattt 48981765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 300 - 450
Target Start/End: Complemental strand, 40590991 - 40590841
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| ||||||||| ||||||| |||||| |||||||||||||||||| ||||||||||||||||| |||||||  || |||  || |||||    
T  40590991 gtcccaaaataactgagtcatttcacttttaaatacaatattaattacttttttccttttataactctaattaatactacttttattattctcatttcaa 40590892  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||||||| |||||  |||||||||||  || ||||||||||||||||||||    
T  40590891 tatattctactttgtatttatgatagcggaaaatgcaccaatacttaacaa 40590841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 336 - 468
Target Start/End: Original strand, 18235166 - 18235299
Alignment:
Q  336 agtattaattactttt-ttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatg 434  Q
    ||||||||||| |||| ||||||||||| |||||||||| | || ||  |||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  18235166 agtattaattattttttttccctttatagctctaattaatattattttcatcatttccaatttcatatattccactttacatttatgatagtggagaatg 18235265  T
Q  435 caccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||||| |||||| |||||    
T  18235266 caccaatacttaacaagtgcatttaaaattattt 18235299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 300 - 436
Target Start/End: Complemental strand, 46288597 - 46288461
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| |||| |||| |||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||||  || | || ||||||||    
T  46288597 gtcccaaaataactgagccatttcacttttcaatataatattaattaattttttccctttataactctaattaatactactttcataactttcaattcaa 46288498  T
Q  400 tatattccactttacatttatgatagtagagaatgca 436  Q
    ||||||||||||| |||| |||||||| |||||||||    
T  46288497 tatattccactttgcattaatgatagtcgagaatgca 46288461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 336 - 461
Target Start/End: Complemental strand, 49100634 - 49100507
Alignment:
Q  336 agtattaattacttttttc--cctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaat 433  Q
    ||||||||||||||||||   ||||||||||| |||||||  ||| ||  ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  49100634 agtattaattactttttttttcctttataactttaattaattctatttttatcatttccaattcaatatattccactttacatttatgatagtggagaat 49100535  T
Q  434 gcaccaatacttaacaagtgcacttaaa 461  Q
      ||||||||||||||||||||||||||    
T  49100534 aaaccaatacttaacaagtgcacttaaa 49100507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 301 - 468
Target Start/End: Complemental strand, 38182039 - 38181872
Alignment:
Q  301 tcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaat 400  Q
    ||||||||||| |||||||||  ||||||||||| | ||||||||| || |||| |||||||||||||||||| |||||||  |  | ||||||||||||    
T  38182039 tcccaaaataactgagtcattttacttttcaataaaatattaattatttctttctctttataactctaattaatactactttcacaacttccaattcaat 38181940  T
Q  401 atattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||| | ||| ||||||||||||| || |||||||||||||||| ||||  |||||||||| ||||    
T  38181939 atattctattttgcatttatgatagtggaaaatgcaccaatacttaccaagaacacttaaaaccattt 38181872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 300 - 462
Target Start/End: Complemental strand, 44604643 - 44604482
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| |||| |||| ||||||||||||||  ||||||||  ||||||| ||||||||||||||||| |||||||  |||| |  ||| ||||    
T  44604643 gtcccaaaataagtgagccatttcacttttcaatacatcattaattatgtttttccttttataactctaattaatactactttcatcactctcaactcaa 44604544  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    ||||||||||||| | ||||||||||| ||||||  ||||||||||||||||  |||||||||    
T  44604543 tatattccactttgc-tttatgatagtggagaataaaccaatacttaacaagaacacttaaaa 44604482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 384 - 473
Target Start/End: Complemental strand, 21387562 - 21387473
Alignment:
Q  384 atcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactatttatttt 473  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| ||||    
T  21387562 atcattttcaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcatttaaaattatttttttt 21387473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 28333116 - 28333279
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    ||||| |||||| ||||| ||||||||||||||  | |||||||||||||||   ||||||||||||||| | |||||  |||| | |||||||||||||    
T  28333116 caaaaaaattgattcatttcacttttcaatacaacaataattacttttttccaaatataactctaattaatattactttcatcactcccaattcaatata 28333215  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||| |||||||||||||||||  | | |||||| ||||||||||||||| |||| ||||||||||    
T  28333216 ttctactttacatttatgataagaaataatgcatcaatacttaacaagt-cactcaaaactattt 28333279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 468
Target Start/End: Complemental strand, 33774204 - 33774042
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||| |||||  ||||||||| ||||||||| |||||||  |  | || ||||||| |||    
T  33774204 ccaaaataactgagtcatttcacttttcaatacaatattaattatttttt--cctttataattctaattaatactactttcacaacttacaattcagtat 33774107  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||| ||| ||||||||| |||||| || ||||||||||||||  |||| ||||||||||    
T  33774106 attccactttgcatctatgatagtggagaatacatcaatacttaacaag-acactcaaaactattt 33774042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 301 - 451
Target Start/End: Complemental strand, 37496562 - 37496412
Alignment:
Q  301 tcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaat 400  Q
    |||||||| ||||||  |||| |||||||||| |||  |||||||||||||||||  |||||||| ||||||| |||||||  |||| |  |||||||||    
T  37496562 tcccaaaaaaattgacccatttcacttttcaacacaacattaattacttttttccaattataactttaattaatactactttcatcactctcaattcaat 37496463  T
Q  401 atattccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    |||||| |||||||||||||||||  | ||||||||| |||||||||||||    
T  37496462 atattctactttacatttatgataagaaagaatgcacaaatacttaacaag 37496412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 32775923 - 32776092
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacag-tattaattacttttttccctttataactctaattaacactacttaaatcatttccaattca 398  Q
    ||||||||| ||||||  |||| |||||| |||||||  ||||||||||||||||||  |||||||||||| ||| |||||||  | || | ||||||||    
T  32775923 gtcccaaaaaaattgacccatttcactttccaatacaaatattaattacttttttccaattataactctaaataatactactttcaccactcccaattca 32776022  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||| |||||||||||||||||    ||||||||||||||||||||||  ||||| ||||| ||||    
T  32776023 atatattctactttacatttatgataaagaagaatgcaccaatacttaacaaaggcactcaaaaccattt 32776092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 300 - 457
Target Start/End: Complemental strand, 40803792 - 40803635
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| |||||||| ||||| || ||||||| |||||| ||||||||| |||||| | |||||||||||| |||| || ||||  |||||| |||||||||    
T  40803792 gtcctaaaataatcgagtcgtttcactttttaatacaatattaattattttttttcttttataactctagttaataccacttttatcattcccaattcaa 40803693  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcact 457  Q
    |||| | || ||||||||||||||||| |||||  |||||||| ||||||||| ||||    
T  40803692 tataattcattttacatttatgatagtggagaaaacaccaatatttaacaagtacact 40803635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 300 - 447
Target Start/End: Original strand, 37157112 - 37157259
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||| ||||  ||| |||||||||||||| ||||||||| |||||||  ||||||||||||||||| |||  ||  ||||||| ||||| ||    
T  37157112 gtcctaaaataactgagctatttcacttttcaatacaatattaattatttttttct-tttataactctaattaatacttttttcatcattttcaatttaa 37157210  T
Q  400 tatattccactttacatttatgatagtag-agaatgcaccaatacttaa 447  Q
    ||||||| ||||||||||||||||||| | | |||||||||||||||||    
T  37157211 tatattctactttacatttatgatagtggaaaaatgcaccaatacttaa 37157259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 345 - 447
Target Start/End: Complemental strand, 37490739 - 37490637
Alignment:
Q  345 tacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatact 444  Q
    |||| |||||||||||||| ||||||||| | |||||  |||| |  ||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  37490739 tactattttccctttataattctaattaatattacttttatcactatcaattcaatatattccactttgcatttatgatagtggagaatgcaccaatact 37490640  T
Q  445 taa 447  Q
    |||    
T  37490639 taa 37490637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 39693732 - 39693805
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    |||||||||||| ||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  39693732 gtcccaaaataagtgagtcatttcacttttcaatacatcattaattacttttttccctttataactctaattaa 39693805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 34064156 - 34064323
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||| ||| |||||| |||||  |||||| ||||||  | || |||||||||| |  |||||||||||||||| | |||||  |||| |  ||||||||    
T  34064156 gtcccgaaaaaattgactcattttactttttaatacaacaatagttacttttttacaattataactctaattaatattactttcatcactctcaattcaa 34064255  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||| |||||||||||||||||  | |||||||||||||||||||||||  |||| ||||||||||    
T  34064256 tatattctactttacatttatgataagaaagaatgcaccaatacttaacaag-acactcaaaactattt 34064323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 468
Target Start/End: Original strand, 37264272 - 37264422
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| |||||||||||||| ||||||||||||||| |   |||||||||||||||| |||||||  | || | |||||||||||||||| ||||| ||||    
T  37264272 catttcacttttcaatacaatattaattactttttcctaattataactctaattaatactactttcaccactcccaattcaatatattctactttgcatt 37264371  T
Q  418 tatgatagtagag-aatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||  |||| |||||| |||||||| ||||| ||||| ||||| ||||    
T  37264372 tatgata-aagagcaatgcatcaatacttgacaagggcactcaaaaccattt 37264422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 442
Target Start/End: Complemental strand, 23186261 - 23186167
Alignment:
Q  348 ttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaata 442  Q
    |||||| |||||||||||||||||||||||||||  |||| | | |||||||||||||| |||||  |||||||||||| |||||||||||||||    
T  23186261 tttttttcctttataactctaattaacactacttttatcactccaaattcaatatattctactttgtatttatgatagtggagaatgcaccaata 23186167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 424
Target Start/End: Complemental strand, 30659628 - 30659522
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||||||  |||||||||||||||||  |||||||||||||||| |||||||  | || ||| |||||||||||||| |||||| |||    
T  30659628 catttcacttttcaatacaacattaattacttttttccaattataactctaattaatactactttcaccacttcaaattcaatatattctactttatatt 30659529  T
Q  418 tatgata 424  Q
    |||||||    
T  30659528 tatgata 30659522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 450
Target Start/End: Original strand, 2849214 - 2849346
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||||||  ||||||||||||||| |  |||||| ||||||||| |||||||  | || |  ||||||||||||||| ||||||||||    
T  2849214 catttcacttttcaatacaacattaattactttttttcaattataattctaattaatactactttcaccactctcaattcaatatattctactttacatt 2849313  T
Q  418 tatgatagtagagaatgcaccaatacttaacaa 450  Q
    |||||||    ||||||||||||||||| ||||    
T  2849314 tatgataaagaagaatgcaccaatacttgacaa 2849346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 311 - 447
Target Start/End: Complemental strand, 5068453 - 5068320
Alignment:
Q  311 attgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccact 410  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||  |||||||||||||||| | |||||  | || |   |||||||||||||| |||    
T  5068453 attgactcatttcactttttaatacaatactaattacttttttccaattataactctaattaatattactttcaccactcttaattcaatatattctact 5068354  T
Q  411 ttacatttatgatagtagagaatgcaccaatacttaa 447  Q
    ||||||||||||   || |||||||||||||||||||    
T  5068353 ttacatttatga---taaagaatgcaccaatacttaa 5068320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 333 - 442
Target Start/End: Original strand, 38589708 - 38589817
Alignment:
Q  333 tacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaa 432  Q
    |||| ||||||||||||||||||  ||||||| |||||||| |||||||  | || | |||||||||||||||| |||||||||||||||||    ||||    
T  38589708 tacaatattaattacttttttccaattataacactaattaatactactttcaccactcccaattcaatatattctactttacatttatgataaagaagaa 38589807  T
Q  433 tgcaccaata 442  Q
    ||||||||||    
T  38589808 tgcaccaata 38589817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 405
Target Start/End: Complemental strand, 45890998 - 45890898
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||  ||| |||||||||||||| || |||||| |||||||||||||||||| ||||||| | |||||  ||||||||||||||||||||    
T  45890998 caaaataactgagcaatttcacttttcaatacaataataatta-ttttttccctttataactataattaatattactttcatcatttccaattcaatata 45890900  T
Q  404 tt 405  Q
    ||    
T  45890899 tt 45890898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 392 - 473
Target Start/End: Complemental strand, 46095494 - 46095413
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactatttatttt 473  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||| |||||||| ||||| ||||| |||| ||||    
T  46095494 caattcaatatatttcactttgcatttatgatagtagagaatgcacaaatatttaacaagagcactcaaaaccatttttttt 46095413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 323 - 447
Target Start/End: Original strand, 17265991 - 17266115
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    |||||||||||| |  |||||||||||||||||   |||| |||||||||| | || ||  |||| | ||||||| ||||||| |||||| |||||||||    
T  17265991 cacttttcaatataacattaattacttttttccaaatatatctctaattaatattattttcatcactcccaattcgatatatttcactttgcatttatga 17266090  T
Q  423 tagtagagaatgcaccaatacttaa 447  Q
    ||||  |||||||||||||||||||    
T  17266091 tagtgaagaatgcaccaatacttaa 17266115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 46095611 - 46095533
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactactt 381  Q
    |||||||||  |||||||| |||||||||||||| ||||||||| |||||||  ||||||||||||||||| |||||||    
T  46095611 ccaaaataaccgagtcatttcacttttcaatacaatattaattaattttttcattttataactctaattaatactactt 46095533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 3668043 - 3667898
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| |||| ||||||  |||| ||||||||||||||  | |||||||||||||||   ||||| ||||||||| | |||||  |||| |  ||||||||    
T  3668043 gtcctaaaaaaattgacccatttcacttttcaatacaacaataattacttttttccaaatataattctaattaatattactttcatcactctcaattcaa 3667944  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatactt 445  Q
    ||||||| |||||||||||||||||  | | ||||||| |||||||    
T  3667943 tatattctactttacatttatgataagaaataatgcactaatactt 3667898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 463
Target Start/End: Complemental strand, 39343819 - 39343674
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| |||||||||||||| ||||||||||  |||| |  |||||||||||||||| |||| ||  | || | | |||||||||||||| ||||||||||    
T  39343819 catttcacttttcaatacaatattaattaccctttttcaattataactctaattaatactattttcaccactccaaattcaatatattctactttacatt 39343720  T
Q  418 tatgatagtagagaatgcaccaatacttaacaagtgcacttaaaac 463  Q
    |||||||    ||||| ||| ||||||| |||| |||||| |||||    
T  39343719 tatgataaagaagaatacacaaatacttgacaaatgcactcaaaac 39343674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 424
Target Start/End: Complemental strand, 10355877 - 10355777
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgat 423  Q
    ||||| ||||||| |||||||||||||||| |  |||||||||||||||| | |||||  | ||||  ||||||||||||||| ||||| ||||||||||    
T  10355877 actttccaatacaatattaattactttttttcaattataactctaattaatattacttttaccattctcaattcaatatattctactttgcatttatgat 10355778  T
Q  424 a 424  Q
    |    
T  10355777 a 10355777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 304 - 450
Target Start/End: Complemental strand, 7456749 - 7456600
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactact---taaatcatttccaattcaat 400  Q
    |||||||| | ||||||| ||| |||||||||| |||||||||  ||||||| |||| |||||||||||| | || |   |  |||| |   |||| |||    
T  7456749 caaaataactaagtcatttcacatttcaatacaatattaattatatttttccttttacaactctaattaatagtattattttcatcactataaatttaat 7456650  T
Q  401 atattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||||||||||||| |||||||||||| |||||| || |||||||||||||    
T  7456649 atattccactttatatttatgatagtggagaatacatcaatacttaacaa 7456600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 304 - 403
Target Start/End: Original strand, 12308324 - 12308422
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||||||| || ||||||||||| |||||||||||||||| | ||||||||||||||||| | |||||  |  | |||||||||||||||    
T  12308324 caaaataactgagtcatttcaattttcaatacaatattaattactttttt-catttataactctaattaatattactttcacaacttccaattcaatata 12308422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 306 - 468
Target Start/End: Complemental strand, 40038270 - 40038107
Alignment:
Q  306 aaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa---tat 402  Q
    |||||| ||||||||| |||||||||||| |  |||||||| |||||||| ||||||||||||||||| |||||||  |||| ||| |||| ||   |||    
T  40038270 aaataagtgagtcatttcacttttcaatatatcattaattatttttttcc-tttataactctaattaatactactttcatcacttcaaatttaatagtat 40038172  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||  |||||  ||||||||||||  ||||| || ||||||||||||||  || |||||| |||||    
T  40038171 attttactttgtatttatgatagtgaagaataca-caatacttaacaagatcatttaaaattattt 40038107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 468
Target Start/End: Original strand, 9602812 - 9602970
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccac 409  Q
    |||||| | ||| ||||| ||||| || |||||||||||||||||   ||||||| |||||||| |||||||  | || |  ||||||||||| ||| ||    
T  9602812 aattgacttatttcacttctcaatgcaatattaattacttttttctaattataacactaattaatactactttcaccactctcaattcaatatgttctac 9602911  T
Q  410 tttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||| |||||||||||  | |||||||| ||||| |||||||| ||| | ||| ||||||    
T  9602912 tttgcatttatgataaaaaagaatgcatcaatagttaacaagcgcattcaaacctattt 9602970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 468
Target Start/End: Original strand, 9830383 - 9830541
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccac 409  Q
    |||||| | ||| ||||| ||||| || |||||||||||||||||   ||||||| |||||||| |||||||  | || |  ||||||||||| ||| ||    
T  9830383 aattgacttatttcacttctcaatgcaatattaattacttttttctaattataacactaattaatactactttcaccactctcaattcaatatgttctac 9830482  T
Q  410 tttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||| |||||||||||  | |||||||| ||||| |||||||| ||| | ||| ||||||    
T  9830483 tttgcatttatgataaaaaagaatgcatcaatagttaacaagcgcattcaaacctattt 9830541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 468
Target Start/End: Original strand, 23058858 - 23058927
Alignment:
Q  398 aatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||| |||||| ||||||||||||| |||||||||||||||| |||||||  |||||||||||||||    
T  23058858 aatatatttcactttgcatttatgatagtggagaatgcaccaatac-taacaagaacacttaaaactattt 23058927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 468
Target Start/End: Complemental strand, 27338020 - 27337871
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||||||||||  |||||||| ||||||||  |||||||| ||||||| | |||||  | || | |||||||||||||||  ||||||||||    
T  27338020 catttcacttttcaatacaacattaatta-ttttttccaattataactttaattaatattacttttaccactcccaattcaatatattatactttacatt 27337922  T
Q  418 tatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||    | ||||||||||||||| ||||   |||| ||||||||||    
T  27337921 tatgataaagaataatgcaccaatacttgacaaagacactcaaaactattt 27337871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 450
Target Start/End: Complemental strand, 2842214 - 2842068
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||| |||||||||  |||||||| ||   ||||||||| |||||  | ||||||| | ||||||| |||||||  |||| |   |||||||    
T  2842214 gtcctaaaataactgagtcattttacttttcactaa--tattaattatttttt--cttttataattataattaatactactttcatcactctaaattcaa 2842119  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    |||||| |||||| ||||||||||||| ||||||||| |||||||| ||||    
T  2842118 tatatttcactttgcatttatgatagtggagaatgcatcaatacttgacaa 2842068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 424
Target Start/End: Original strand, 18731413 - 18731504
Alignment:
Q  330 caatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    |||||||  ||||||| |||||||||  ||||||||||||||||   |||||  | || |||||||||||||||||| |||||||||||||||||    
T  18731413 caatacaacattaattgcttttttccaattataactctaattaa---tactttcaccacttccaattcaatatattctactttacatttatgata 18731504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 367
Target Start/End: Complemental strand, 5083636 - 5083573
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactct 367  Q
    |||||||| ||||||||| |||||||||||| | ||||||||| |||||||| |||||||||||    
T  5083636 caaaataagtgagtcatttcacttttcaatataatattaattatttttttccttttataactct 5083573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 8149911 - 8150042
Alignment:
Q  311 attgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccact 410  Q
    ||||| ||||| || ||||||||||| ||||||||||||||||||  |||||||||||||||| | |||||  |||| | | | ||| |||||||| |||    
T  8149911 attgattcatttcatttttcaatacaatattaattacttttttccaattataactctaattaatattactttcatcactactagttcgatatattctact 8150010  T
Q  411 ttacatttatgatagtagagaatgcaccaata 442  Q
    ||   ||||||||| | || ||||||| ||||    
T  8150011 ttgattttatgataatggaaaatgcacaaata 8150042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 424
Target Start/End: Complemental strand, 14649063 - 14648961
Alignment:
Q  324 acttttcaatacagtat--taattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatg 421  Q
    ||||||||||||| |||  |||||||||||||||  |||||||||||||||| | |||||  |||| |  ||||||||||||||| || || ||||||||    
T  14649063 acttttcaatacaatatattaattacttttttccaattataactctaattaatattactttcatcactctcaattcaatatattctaccttgcatttatg 14648964  T
Q  422 ata 424  Q
    |||    
T  14648963 ata 14648961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 445
Target Start/End: Original strand, 25778743 - 25778830
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatactt 445  Q
    |||||||||||||||| |||||||  |||| |||||||||||||||||  ||||| |||||||||||  |  ||||| ||||||||||    
T  25778743 ttataactctaattaatactactttcatcacttccaattcaatatattttactttgcatttatgataagaaggaatgtaccaatactt 25778830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 326 - 444
Target Start/End: Original strand, 30462627 - 30462745
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    |||||||||||  |||||||| |||||| |  |||||||||||||||| |||| ||  |||| |  ||||||||||||||  | |||||||||||||||     
T  30462627 ttttcaatacaacattaattattttttttcaattataactctaattaatactaatttcatcactctcaattcaatatattatattttacatttatgataa 30462726  T
Q  426 tagagaatgcaccaatact 444  Q
     | | ||||||||||||||    
T  30462727 aaaataatgcaccaatact 30462745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 451
Target Start/End: Complemental strand, 29997169 - 29997044
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    ||||||||||| |||||||||| ||||| |  ||||||  |||||||| |||||||  |  ||| |||| ||||||||||  ||||| |||||||||||     
T  29997169 ttttcaatacaatattaattaccttttttcaattataatactaattaatactactttcacaattcccaactcaatatattatactttgcatttatgataa 29997070  T
Q  426 tagagaatgcaccaatacttaacaag 451  Q
       |||||||||||||| ||||||||    
T  29997069 agaagaatgcaccaataattaacaag 29997044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 468
Target Start/End: Complemental strand, 45218233 - 45218156
Alignment:
Q  391 ccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||| |||||||||||||||||    ||||||||||||||||| | ||  ||||| ||||||||||    
T  45218233 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactattt 45218156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 48981320 - 48981369
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattactt 349  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  48981320 gtcccaaaataactgagtcatttcacttttcaatacaatattaattactt 48981369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 27234484 - 27234612
Alignment:
Q  340 ttaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcacca 439  Q
    ||||||| ||||||||   ||||||| ||||||| |||| ||  |||| |  ||||| |||||||| |  ||| ||||||||||||| ||||||||| ||    
T  27234484 ttaattatttttttccaaatataactttaattaatactattttcatcactcacaatttaatatatttcgttttgcatttatgatagtggagaatgcatca 27234583  T
Q  440 atacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||   |||||||||| ||||    
T  27234584 atacttaacaaaaacacttaaaacaattt 27234612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 468
Target Start/End: Complemental strand, 34001933 - 34001857
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||||| ||||||||||| | || |   || |||||||||||||| ||||||||||| ||||    
T  34001933 caattcaatatattccactttgcatttatgataatggataccacatcaatacttaacaagagcacttaaaaccattt 34001857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 40023887 - 40023772
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    |||| |||||| ||||| |||||||||||||| ||||||||||||||||    |||||||||||||||| | || ||  ||||||   ||||||||||||    
T  40023887 aaaaaaattgactcatttcacttttcaatacaatattaattactttttt-taattataactctaattaatagtaatttcatcattcataattcaatatat 40023789  T
Q  405 tccactttacatttatg 421  Q
    |  ||||| ||||||||    
T  40023788 tttactttgcatttatg 40023772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 470
Target Start/End: Original strand, 24288456 - 24288534
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactatttat 470  Q
    ||||||||||||||| |||||||||||||||||    ||||||||| ||||||| | ||  ||||| ||||||||||||    
T  24288456 caattcaatatattctactttacatttatgataaagaagaatgcacaaatacttgaaaaaggcactcaaaactatttat 24288534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 381
Target Start/End: Complemental strand, 23111672 - 23111615
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactactt 381  Q
    ||||||||||| | ||||||||||||||||||  ||||||| |||||||| |||||||    
T  23111672 acttttcaatataatattaattacttttttccaattataacactaattaatactactt 23111615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 468
Target Start/End: Complemental strand, 1643412 - 1643336
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||| ||||||||||||||| ||||||||||  |  ||||||||||||||||||| ||  |||||| ||| |||||    
T  1643412 caatttaatatattccactttgcatttatgattatgaagaatgcaccaatacttaataaaagcactttaaattattt 1643336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 432 - 468
Target Start/End: Complemental strand, 5083506 - 5083470
Alignment:
Q  432 atgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||||||| ||||||||||||||||    
T  5083506 atgcaccaatacttaacaagagcacttaaaactattt 5083470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 445
Target Start/End: Complemental strand, 27242891 - 27242751
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||| | ||| |||||||||||  |||||||||||| ||||||   ||||||||||||||||   || ||  ||||||  |||||||||||||    
T  27242891 aaaataactgacttatttcacttttcaatgtagtattaattacctttttctaattataactctaattaattttattttcatcattctcaattcaatatat 27242792  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatactt 445  Q
    |  | ||| |||||||| || | |  |||||||||||||||    
T  27242791 tttattttgcatttatgttaatggtaaatgcaccaatactt 27242751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 405
Target Start/End: Original strand, 39498640 - 39498720
Alignment:
Q  325 cttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatatt 405  Q
    ||||||||| || |||||||||||||||||   |||||| ||||||||| | |||||  |||| | |||||||||||||||    
T  39498640 cttttcaatgcaatattaattacttttttctaattataattctaattaatattactttcatcactcccaattcaatatatt 39498720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 437
Target Start/End: Complemental strand, 25940856 - 25940778
Alignment:
Q  359 tataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcac 437  Q
    ||||||||||||||| |||||||  |||| |   |||| ||||||||| | ||| ||||||||||| ||||||||||||    
T  25940856 tataactctaattaatactactttcatcactctaaatttaatatattctagtttgcatttatgataatagagaatgcac 25940778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 356
Target Start/End: Complemental strand, 21387757 - 21387716
Alignment:
Q  315 agtcattccacttttcaatacagtattaattacttttttccc 356  Q
    ||||||| |||||||||||| | |||||||||||||||||||    
T  21387757 agtcatttcacttttcaatataatattaattacttttttccc 21387716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 353
Target Start/End: Original strand, 27621779 - 27621828
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattactttttt 353  Q
    ||||| |||||| ||||| |||||||||||||| ||| ||||||||||||    
T  27621779 caaaaaaattgattcatttcacttttcaatacaatatcaattactttttt 27621828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 468
Target Start/End: Complemental strand, 32972092 - 32972016
Alignment:
Q  392 caattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||| ||||| ||||||||| |  | |||||||||||||| || | ||| ||||| ||||| ||||    
T  32972092 caattcaatatattctactttgcatttatgacaaaaaagaatgcaccaatagttgataagggcactcaaaaccattt 32972016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 2e-53; HSPs: 79)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 318 - 468
Target Start/End: Original strand, 7613666 - 7613816
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatt 417  Q
    |||| ||||||| |||||| |||||||||||||||| ||||||||||| ||||||| | |||||  |||||||||||||||||||||| |||||||||||    
T  7613666 catttcactttttaatacaatattaattactttttttcctttataactataattaatattacttttatcatttccaattcaatatatttcactttacatt 7613765  T
Q  418 tatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7613766 tatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactattt 7613816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 11099644 - 11099476
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| ||||||||| |||||| ||||||| ||||||||||||||| |||||||||||||||||||| |||||||  |||| | |||||||||    
T  11099644 gtcccaaaataactgagtcatttcactttccaatacaatattaattactttttcccctttataactctaattaatactactttcatcactcccaattcaa 11099545  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||  |||||||||||| |||||||||||||||||||||||   |||||||||||||||    
T  11099544 tatattccactttgtatttatgatagtggagaatgcaccaatacttaacaaaaacacttaaaactattt 11099476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 305 - 468
Target Start/End: Original strand, 25814310 - 25814473
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||| ||||| |||||||||||||| |||||||||||||||||| ||||||||| ||||||| | ||||   |||||||||||||||||||||    
T  25814310 aaaataactgaatcatttcacttttcaatacaatattaattacttttttccttttataactttaattaatattactctcatcatttccaattcaatatat 25814409  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    | |||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||    
T  25814410 ttcactttacatttatgatagtggataatgtaccaatacttaacaagtgcacttaaaactattt 25814473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 42575805 - 42575637
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||||||  ||| |||| |||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||  |  | |||||||||||    
T  42575805 gtcccaaaataaccgagccatttcacttttcaatacaatattaattacttttttccctttataactttaattaatactactttcacaacttccaattcaa 42575706  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||| |||| ||||||||||| ||||    
T  42575705 tatattccactttgcatttatgatagtggagaatacaccaatacttaccaagagcacttaaaaccattt 42575637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 313 - 468
Target Start/End: Original strand, 20189846 - 20190001
Alignment:
Q  313 tgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccacttt 412  Q
    ||||||||| ||||||| |||||| ||||||||| |||||||||||||||||||||||||| | |||||  ||||||  |||||||||||||||||||||    
T  20189846 tgagtcatttcactttttaatacaatattaattatttttttccctttataactctaattaatattactttcatcattctcaattcaatatattccacttt 20189945  T
Q  413 acatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||| | ||||||||| || |||||||||| |||||||||||||||||    
T  20189946 acatttatgataatggagaatgcatcagtacttaacaaatgcacttaaaactattt 20190001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 35334693 - 35334525
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| |||| |||| ||||||||||||||  |||||||| |||||||| ||||||||||||||||| |||||||  |||| | |||||||||    
T  35334693 gtcccaaaataagtgagccatttcacttttcaatacatcattaattatttttttccttttataactctaattaatactactttcatcactcccaattcaa 35334594  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||| ||||||||||||| ||||||  || ||||||||| ||| ||||||||||||||||    
T  35334593 tatattccactttgcatttatgatagtggagaatagacaaatacttaataagagcacttaaaactattt 35334525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 308 - 462
Target Start/End: Complemental strand, 35646248 - 35646094
Alignment:
Q  308 ataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattcc 407  Q
    |||| ||||||||| |||||||||||||  |||||||||||||||||| ||||||||||||||||| |||||||  |  | ||| |||||||||||||||    
T  35646248 ataactgagtcatttcacttttcaatacgatattaattacttttttccttttataactctaattaatactactttcacaacttctaattcaatatattcc 35646149  T
Q  408 actttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||  |||||||||    
T  35646148 actttgcatttatgatagtggagaatgcaccaatacttaacaagatcacttaaaa 35646094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 305 - 452
Target Start/End: Original strand, 4412329 - 4412474
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| | ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||  |||||||| ||||||||||||    
T  4412329 aaaataactaagtcatttcacttttcaatacaatattaattacttttttccctttataactctaattaatactattttcatcatttctaattcaatatat 4412428  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagt 452  Q
    ||||   ||||||||| ||||||||||||||| |||||||||||||||    
T  4412429 tcca--gtacatttataatagtagagaatgcatcaatacttaacaagt 4412474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 3725128 - 3725295
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||| ||||||||| |||||||||||||| ||||||||  |||||||||||||||||||||||||| | |||||  |||| |  |||||| |    
T  3725128 gtcctaaaataactgagtcatttcacttttcaatacaatattaattt-ttttttccctttataactctaattaatattactttcatcactcacaattcga 3725226  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||||||||  ||||||||||| ||||    
T  3725227 tatattccactatgcatttatgatagtggagaatgcaccaatacttaacaatagcacttaaaaccattt 3725295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 39008070 - 39008241
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| ||||||| | ||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||  |  | |||||||||||    
T  39008070 gtcctaaaataactaagtcatttcacttttcaatacaatattaattatttttttccctttataactctaattaatactactttca-aacttccaattcaa 39008168  T
Q  400 tatattccactttacatttatga----tagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||| ||||||||||||||||    |||| ||||||| |||||||||||||||| ||||||||||| ||||    
T  39008169 tatatttcactttacatttatgatagttagtggagaatgaaccaatacttaacaagagcacttaaaaccattt 39008241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 8369864 - 8369695
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttcccttt-ataactctaattaacactacttaaatcatttccaattca 398  Q
    |||||||||||| |||| |||| || ||||||||||| ||||||||| ||||||  |||| |||||||||||||| |||||||  |  | || |||||||    
T  8369864 gtcccaaaataactgagccatttcatttttcaatacaatattaattatttttttttcttttataactctaattaatactactttcacaactttcaattca 8369765  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||| ||||||| ||||    
T  8369764 atatattccactttgcatttatgatagtggagaatgcaccaatacttaacaagagcatttaaaacaattt 8369695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 303 - 468
Target Start/End: Complemental strand, 8692982 - 8692817
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    |||||||||  |||||||| || ||||||||||| |||||||||||||||| ||||||||||||||||||| | |||||  |  | |||||||| |||||    
T  8692982 ccaaaataaccgagtcatttcatttttcaatacaatattaattactttttttcctttataactctaattaatattactttcacaacttccaatttaatat 8692883  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||| || ||| ||||||||||||| ||||||||||||||||||||||||  |||||||||| ||||    
T  8692882 atttcattttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaaccattt 8692817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 33988140 - 33988309
Alignment:
Q  300 gtcccaaaataattgagtc-attccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattca 398  Q
    |||||||||||| |||||  ||| ||||||||||||||  ||||||||||| ||||||||||||||||||||| | | |||||  || | | ||||||||    
T  33988140 gtcccaaaataagtgagtttatttcacttttcaatacatcattaattacttgtttccctttataactctaattcatattactttcattactcccaattca 33988239  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||   |||||||||| ||||    
T  33988240 atatattccactttacatttatgatagtggagaatacaccaatacttaacaaaaacacttaaaaccattt 33988309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 305 - 468
Target Start/End: Complemental strand, 17243115 - 17242953
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||| ||||| ||| ||||||| ||||||  |||||||||||||| |||||||||||||||||||| |||||||  |||| |  |||||||||||||    
T  17243115 aaaataagtgagttatttcactttttaatacatcattaattacttttt-ccctttataactctaattaatactactttcatcactctcaattcaatatat 17243017  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||| ||||||||||||||||||||  |||||||||||||||| | ||| ||||| ||||    
T  17243016 tccactttgcatttatgatagtagagaatagaccaatacttaacaagagtactaaaaaccattt 17242953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 300 - 447
Target Start/End: Original strand, 6610776 - 6610925
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattactttttt--ccctttataactctaattaacactacttaaatcatttccaattc 397  Q
    |||||||||||| ||||||||| ||||||| |||||| ||||||||||||||||  | |||||||||| ||||||| | |||||  |||| | | |||||    
T  6610776 gtcccaaaataactgagtcatttcacttttaaatacaatattaattacttttttttctctttataactttaattaatattactttcatcactccgaattc 6610875  T
Q  398 aatatattccactttacatttatgatagtagagaatgcaccaatacttaa 447  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  6610876 aatatatttcactttacatttatgatagtggagaatgcaccaatacttaa 6610925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 305 - 439
Target Start/End: Original strand, 13135699 - 13135833
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    |||||||| |||||||| |||||||||||||| |||||| || |||||||||||||||||| ||||||  |||||||  |||| | | ||||||||||||    
T  13135699 aaaataatcgagtcatttcacttttcaatacaatattaaatatttttttccctttataactttaattactactactttcatcactcctaattcaatatat 13135798  T
Q  405 tccactttacatttatgatagtagagaatgcacca 439  Q
    |||||||| ||||||||||||| ||||||||||||    
T  13135799 tccactttgcatttatgatagtggagaatgcacca 13135833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 306 - 462
Target Start/End: Complemental strand, 22583032 - 22582877
Alignment:
Q  306 aaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatatt 405  Q
    |||||| ||||| ||| || ||||||||||| ||||||||| ||||||  |||||||||||||||||| |||||||  |  | |||||||||||||| ||    
T  22583032 aaataactgagttatttcaattttcaatacaatattaattatttttttttctttataactctaattaatactactttcacaacttccaattcaatat-tt 22582934  T
Q  406 ccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    ||||||| ||||||||||||| ||||||||| || ||||||||||| ||||||||||    
T  22582933 ccactttgcatttatgatagtggagaatgcatcattacttaacaagagcacttaaaa 22582877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 300 - 450
Target Start/End: Complemental strand, 5357984 - 5357834
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||| || |||||| |||||| |||||||||||||||||||||||||   |||||||||||||||| | |||||  | || ||||||| |||    
T  5357984 gtcccaaaataactgtgtcatttcactttccaatacagtattaattacttttttcaaattataactctaattaatattactttcaccacttccaatacaa 5357885  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||||||| |||||||||||||||||    |||||| |||||||||||||||    
T  5357884 tatattctactttacatttatgataaagaagaatgaaccaatacttaacaa 5357834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 305 - 468
Target Start/End: Original strand, 858281 - 858444
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    |||||||  |||||||| ||| |||||||||| |||||||||||||||| ||||||||||||||||||| |||||||  |||| |  ||||| |||||||    
T  858281 aaaataaccgagtcatttcacatttcaatacaatattaattacttttttacctttataactctaattaatactactttcatcactctcaattaaatatat 858380  T
Q  405 tccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    | || ||| ||||||||||| | ||||||| ||||||| ||||||||   ||||||||| ||||    
T  858381 ttcattttgcatttatgataatggagaatgtaccaatatttaacaagataacttaaaaccattt 858444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 301 - 468
Target Start/End: Original strand, 33012296 - 33012463
Alignment:
Q  301 tcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaat 400  Q
    ||||||||||  |||| |||| ||||||||||| || ||||||||||||||||| ||||||||| ||| |||| |||||||  |||| | ||||||| ||    
T  33012296 tcccaaaatatctgagccatttcacttttcaatgcaatattaattacttttttctctttataacgctagttaatactactttcatcactcccaattctat 33012395  T
Q  401 atattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||  |||| | | ||| | |||||||| ||||||||||||| ||||||||||| ||||    
T  33012396 atattccactttgaatttctaagagtggtgaatgcacaaatacttaacaagagcacttaaaaccattt 33012463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 4044643 - 4044499
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||||||||||||||| ||||| |||||||||||||| |||||||||||||||| ||||||||| | ||||||| | || ||  | ||   |||||||||    
T  4044643 gtcccaaaataattgaatcatttcacttttcaatacaatattaattactttttt-cctttataaatttaattaataatattttcaccacacccaattcaa 4044545  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatactt 445  Q
    ||||||| |||||||||||||||||    |||||||||||||||||    
T  4044544 tatattctactttacatttatgataaagaagaatgcaccaatactt 4044499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 326 - 462
Target Start/End: Complemental strand, 39183767 - 39183632
Alignment:
Q  326 ttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatag 425  Q
    ||||||||||| |||||||||||||||||  || |||||||||||||| | |||||  |||| |  ||||||||||||||||||||| ||||||||||||    
T  39183767 ttttcaatacaatattaattacttttttcaatt-ataactctaattaatattactttcatcactctcaattcaatatattccactttgcatttatgatag 39183669  T
Q  426 tagagaatgcaccaatacttaacaagtgcacttaaaa 462  Q
    | |||||| || ||||||||||| |  ||||||||||    
T  39183668 tggagaattcatcaatacttaacgaaagcacttaaaa 39183632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 303 - 445
Target Start/End: Original strand, 41184061 - 41184203
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    ||||||||| ||||| |||  ||||||||||||| |||||||||| ||||| | ||||||||||||||||| | |||||  ||||||  ||||| ||| |    
T  41184061 ccaaaataactgagtgattttacttttcaatacaatattaattacattttttcatttataactctaattaatattactttcatcattctcaatttaattt 41184160  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatactt 445  Q
    ||||||||||| || ||||||| | |||||||| |||||||||    
T  41184161 attccactttaaatctatgataatggagaatgccccaatactt 41184203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 468
Target Start/End: Original strand, 42211276 - 42211438
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttt-tttccctttataactctaattaacactacttaaatcatttccaattcaata 401  Q
    ||||||||| ||||||||| ||||||| |||||| | ||| ||||||| ||| |||||||||||| |||||| |||||||  |||| |  ||||||||||    
T  42211276 ccaaaataactgagtcatttcacttttgaatacaatcttatttactttgttttcctttataactcaaattaatactactttcatcactcacaattcaata 42211375  T
Q  402 tattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||| |||||| ||||||||||||| || ||| |    |||||||||||| ||||||||||| ||||    
T  42211376 tatttcactttgcatttatgatagtggaaaatac----atacttaacaagagcacttaaaaccattt 42211438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 451
Target Start/End: Original strand, 4475186 - 4475338
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttata-actctaattaacactacttaaatcatttccaattca 398  Q
    |||||||||||| |||  || | ||||||||||| || |||||||||| | |||||  ||||| ||| ||||||| |||||||  |||||||||||||||    
T  4475186 gtcccaaaataactgacccaattcacttttcaatgcaatattaattacatatttccaattatacactataattaatactacttttatcatttccaattca 4475285  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    | || ||||||||| ||||||||||| | | |||||||||||||||| |||||    
T  4475286 acattttccactttgcatttatgataatggtgaatgcaccaatacttgacaag 4475338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 450
Target Start/End: Complemental strand, 36469260 - 36469111
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccct----ttataactctaattaacactacttaaatcatttccaattcaat 400  Q
    ||||||||||| ||||| || ||||||||||| ||||||||| |||||| | |    |||||| ||||||||| |||||||  |||| ||  ||||||||    
T  36469260 aaaataattgattcatttcatttttcaatacaatattaattattttttttcttctaattataattctaattaatactactttcatcacttttaattcaat 36469161  T
Q  401 atattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    |||||  ||||| ||||||||||||| |||||||||||||||| ||||||    
T  36469160 atattatactttgcatttatgatagtggagaatgcaccaatacataacaa 36469111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 451
Target Start/End: Complemental strand, 39212724 - 39212566
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccct------ttataactctaattaacactacttaaatcatttcca 393  Q
    ||||||||||||||||  |||||||||||||||| || ||||||||||||||||   |      |||||||||||||||| |||||||  |||  | |||    
T  39212724 gtcccaaaataattgacccattccacttttcaatgcaatattaattacttttttttttcttcaattataactctaattaatactactttcatcgctccca 39212625  T
Q  394 attcaatatattccactttacatttatgatagt-agagaatgcaccaatacttaacaag 451  Q
    ||||||||||||| ||||| ||||||||||| |  | |||||||||||||||| |||||    
T  39212624 attcaatatattctactttgcatttatgataatgggggaatgcaccaatacttgacaag 39212566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 72272 - 72128
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||| ||||||  |||| |||||||||||||| || |||||||||||| ||  |||||| ||||||||| |||||||  |||| | | |||| ||    
T  72272 gtcccaaaaaaattgacccatttcacttttcaatacaataataattactttttcccaattataaatctaattaatactactttcatcactcctaatttaa 72173  T
Q  400 tatattccactttacatttatgat-agtagagaatgcaccaatact 444  Q
    ||||||| ||||| |||||||||| || ||| ||||||||||||||    
T  72172 tatattctactttgcatttatgataagaaga-aatgcaccaatact 72128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 373
Target Start/End: Original strand, 13716955 - 13717024
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    |||||||| |||||||||  | ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13716955 caaaataactgagtcattttatttttcaatacaatattaattacttttttccctttataactctaattaa 13717024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 359 - 447
Target Start/End: Complemental strand, 6735465 - 6735377
Alignment:
Q  359 tataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaa 447  Q
    ||||||||||||||| | |||||  |||| ||| |||| ||||||||||||||| ||||||||||||| |||||||||| |||||||||    
T  6735465 tataactctaattaatattactttcatcacttcaaatttaatatattccactttgcatttatgatagtggagaatgcacaaatacttaa 6735377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 358 - 450
Target Start/End: Complemental strand, 16283696 - 16283604
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    |||||||||||||| |  ||||||  |||| |  ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  16283696 ttataactctaattgatgctactttcatcactctcaattcaatatattccactttgcatttatgatagttgagaatgcaccaatacataacaa 16283604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 402
Target Start/End: Original strand, 15814608 - 15814703
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    |||||||| ||||||||| |||||||||||||| ||||||||| ||||||  |||||||||||||||||| |||||||  ||||  |||||||||||||    
T  15814608 caaaataactgagtcatttcacttttcaatacaatattaattattttttt--ctttataactctaattaatactactttcatca-ctccaattcaatat 15814703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 312 - 468
Target Start/End: Complemental strand, 6629548 - 6629392
Alignment:
Q  312 ttgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata-ttccact 410  Q
    |||| ||||| ||||||||||||||  | ||||||||||||||   ||||||||||||||||   |||||  |||| | |||||| |||||| |||||||    
T  6629548 ttgactcatttcacttttcaatacaacaataattacttttttctaattataactctaattaattttactttcatcactcccaatttaatatatttccact 6629449  T
Q  411 ttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    || ||||||| |||  | ||||||||||||||||| |||||  |||| ||||||||||    
T  6629448 ttgcatttataataaaaaagaatgcaccaatacttgacaag-acactcaaaactattt 6629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 442
Target Start/End: Complemental strand, 13016521 - 13016389
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattcaatatattcca 408  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||  |  ||||||  |||||||| | |||||  | || | |||||||||||||||| |    
T  13016521 aattgactcatttcacttttcaatacaatattaattacttttttttcgattataaaactaattaatattactttcaccactcccaattcaatatattcta 13016422  T
Q  409 ctttacatttatgatagtagagaatgcaccaata 442  Q
    |||| |||||||||||  ||||||||||||||||    
T  13016421 ctttgcatttatgata-aagagaatgcaccaata 13016389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 32539661 - 32539766
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcact 457  Q
    |||||||||||||||| |||| ||  |||| |||| ||| ||||||||  | ||||||||||||||||| |||||||||||||||| ||| ||  |||||    
T  32539661 ttataactctaattaatactattttcatcacttccgatttaatatattttattttacatttatgatagtggagaatgcaccaatacataataaaagcact 32539760  T
Q  458 taaaac 463  Q
    ||||||    
T  32539761 taaaac 32539766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 375 - 451
Target Start/End: Original strand, 24231026 - 24231102
Alignment:
Q  375 actacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    |||||||  |||| || ||||||||||||||||||||| |||||||| |||| ||||||||| ||||||||||||||    
T  24231026 actactttcatcagtttcaattcaatatattccactttccatttatggtagtggagaatgcatcaatacttaacaag 24231102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 345 - 468
Target Start/End: Original strand, 25108559 - 25108682
Alignment:
Q  345 tacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatact 444  Q
    |||||||||||  |||||| | ||||||| |||||||  | || |||||||||||||||||  |||||||||||||||||    |||||||| |||||||    
T  25108559 tacttttttccaattataattttaattaatactactttcaccacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatact 25108658  T
Q  445 taacaagtgcacttaaaactattt 468  Q
    ||||||   |||| ||||||||||    
T  25108659 taacaaagacactcaaaactattt 25108682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 345 - 468
Target Start/End: Complemental strand, 25111270 - 25111147
Alignment:
Q  345 tacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatact 444  Q
    |||||||||||  |||||| | ||||||| |||||||  | || |||||||||||||||||| |||||||||||||||||    |||||||| |||||||    
T  25111270 tacttttttccaattataattttaattaatactactttcaccacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatact 25111171  T
Q  445 taacaagtgcacttaaaactattt 468  Q
    | ||||   |||| ||||||||||    
T  25111170 tgacaaagacactcaaaactattt 25111147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 345 - 468
Target Start/End: Original strand, 25167651 - 25167774
Alignment:
Q  345 tacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatact 444  Q
    |||||||||||  |||||| | ||||||| |||||||  | || |||||||||||||||||  |||||||||||||||||    |||||||| |||||||    
T  25167651 tacttttttccaattataattttaattaatactactttcaccacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatact 25167750  T
Q  445 taacaagtgcacttaaaactattt 468  Q
    ||||||   |||| ||||||||||    
T  25167751 taacaaagacactcaaaactattt 25167774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 345 - 468
Target Start/End: Complemental strand, 25170361 - 25170238
Alignment:
Q  345 tacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatact 444  Q
    |||||||||||  |||||| | ||||||| |||||||  | || |||||||||||||||||| |||||||||||||||||    |||||||| |||||||    
T  25170361 tacttttttccaattataattttaattaatactactttcaccacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatact 25170262  T
Q  445 taacaagtgcacttaaaactattt 468  Q
    | ||||   |||| ||||||||||    
T  25170261 tgacaaagacactcaaaactattt 25170238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 300 - 422
Target Start/End: Original strand, 34534865 - 34534985
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||| |||||| ||| | |||||||||||||| |||||||||  ||||| |  |||||||||||||||| | |||||  ||||||  ||||||||    
T  34534865 gtcccaaaaaaattgattcagttcacttttcaatacaatattaatta--ttttttcaattataactctaattaatattacttttatcattctcaattcaa 34534962  T
Q  400 tatattccactttacatttatga 422  Q
    ||||||  |||||| ||||||||    
T  34534963 tatattatactttatatttatga 34534985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 442
Target Start/End: Complemental strand, 13087899 - 13087767
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattcaatatattcca 408  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||  |  ||||||  |||||||| | |||||  | || |  ||||||||||||||| |    
T  13087899 aattgactcatttcacttttcaatacaatattaattacttttttttcgattataaaactaattaatattactttcaccactctcaattcaatatattcta 13087800  T
Q  409 ctttacatttatgatagtagagaatgcaccaata 442  Q
    |||| |||||||||||  ||||||||||||||||    
T  13087799 ctttgcatttatgata-aagagaatgcaccaata 13087767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 451
Target Start/End: Complemental strand, 35585761 - 35585632
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatg 421  Q
    |||||||||||||| ||||||||||||||||  |  |||||||| |||| || | |||||  |||| |  |||||||||||||| ||||||   ||||||    
T  35585761 cacttttcaatacaatattaattacttttttttcaattataactttaatcaatattactttcatcactctcaattcaatatatttcactttgtctttatg 35585662  T
Q  422 atagtagagaatgcaccaatacttaacaag 451  Q
    ||||| || |||||| ||||||||||||||    
T  35585661 atagtggataatgcatcaatacttaacaag 35585632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 365 - 450
Target Start/End: Complemental strand, 36446789 - 36446704
Alignment:
Q  365 tctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||||||||| |||||||  |||| || ||||||||||||||  ||||| ||||||||||||| |||||||||| ||||| ||||||    
T  36446789 tctaattaatactactttcatcactttcaattcaatatattatactttgcatttatgatagtggagaatgcacaaatacataacaa 36446704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 468
Target Start/End: Original strand, 42818868 - 42819012
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    |||||||||||| | |||||||||||||||| |  |||||||||||||||| |||| ||  | ||  ||  ||||||||||||| |||||||||||||||    
T  42818868 cacttttcaatataatattaattactttttttcaattataactctaattaatactattttcacca-ctctcattcaatatattctactttacatttatga 42818966  T
Q  423 tagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||    |||||||||||||  |||| ||| ||||| ||||| ||||    
T  42818967 taaagaagaatgcaccaatgattaataagggcactcaaaaccattt 42819012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 448
Target Start/End: Complemental strand, 16926256 - 16926110
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    |||| |||| ||||||  |||| || ||| ||||||| ||||||||||||||||||  ||||||||| ||| || || ||||  |  | |||||||||||    
T  16926256 gtcctaaaaaaattgacccatttcattttccaatacaatattaattacttttttccaattataactcaaat-aatac-actttcacaacttccaattcaa 16926159  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaac 448  Q
    ||||||| ||||| |||||||||||    ||||||||||||||||||||    
T  16926158 tatattctactttccatttatgataaagaagaatgcaccaatacttaac 16926110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 367
Target Start/End: Original strand, 7276324 - 7276391
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactct 367  Q
    |||| ||||||| ||||| |||  ||||||||||||| ||||||||||||||||| ||||||||||||    
T  7276324 gtcctaaaataactgagttattttacttttcaatacaatattaattacttttttcactttataactct 7276391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 461
Target Start/End: Original strand, 15898143 - 15898293
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccac 409  Q
    |||||| | ||| |||||||||||||| |||||||||||||||| |  ||||||| |||||||| | |||||  | || |  ||||||||||||||| ||    
T  15898143 aattgacttatttcacttttcaatacaatattaattactttttt-caattataacactaattaatattactttcaccactctcaattcaatatattctac 15898241  T
Q  410 tttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaa 461  Q
    ||| |||||||||||    |||||||| ||||| |||| |||  ||||||||    
T  15898242 tttgcatttatgataaagaagaatgcatcaatagttaataaggacacttaaa 15898293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 468
Target Start/End: Original strand, 41184730 - 41184769
Alignment:
Q  429 agaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41184730 agaatgcaccaatacttaacaagtgcacttaaaactattt 41184769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 13597970 - 13598116
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttata-actctaattaacactacttaaatcatttccaattca 398  Q
    |||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||    ||||| ||| ||||| | | ||| |  ||||||  |||||||    
T  13597970 gtcctaaaataattgactcatttcacttttcaatacaatattaattacttttttttaattatacactataattgatattacctttatcattctcaattca 13598069  T
Q  399 atatattccactttacatttatgatagtagagaatgcaccaatactt 445  Q
    |  | ||||||||||||||||||||| | | |||||||  |||||||    
T  13598070 acttcttccactttacatttatgataatggtgaatgcattaatactt 13598116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 464
Target Start/End: Complemental strand, 16884040 - 16883934
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcact 457  Q
    |||||||||||||||| |||||||  | ||   | |||||||||||||  ||||||||||||||||| ||| |||||||| ||| |||||||||  ||||    
T  16884040 ttataactctaattaatactactttcaccacccctaattcaatatattttactttacatttatgataatagtgaatgcacaaatgcttaacaagaacact 16883941  T
Q  458 taaaact 464  Q
     ||||||    
T  16883940 caaaact 16883934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 468
Target Start/End: Complemental strand, 36007034 - 36006891
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    ||||||||||||||  ||| ||||  |||||||  |||||||||||||||| | || ||  | || |||||||||| ||||||| |||||||||||||||    
T  36007034 cacttttcaatacaacatttatta--tttttccaattataactctaattaatattattttcaccacttccaattcagtatattctactttacatttatga 36006937  T
Q  423 tagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||    ||||||||| ||||||| ||||   |||||||||| ||||    
T  36006936 taaagaagaatgcacaaatacttgacaaagacacttaaaaccattt 36006891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 403
Target Start/End: Original strand, 4194599 - 4194684
Alignment:
Q  318 cattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||| |||||||||||||| |||||||||||||||| |  ||||||| |||||||| |||||||  | || | |||||||||||||    
T  4194599 catttcacttttcaatacaatattaattactttttttcaattataacactaattaatactactttcaccactcccaattcaatata 4194684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 353
Target Start/End: Complemental strand, 9426720 - 9426667
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattactttttt 353  Q
    |||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  9426720 gtcctaaaataattgactcatttcacttttcaatacaatattaattactttttt 9426667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 373
Target Start/End: Original strand, 14259612 - 14259681
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    |||||||| ||| ||||| || ||||||||| | |||||||||||||||||| ||||||| |||||||||    
T  14259612 caaaataactgattcatttcatttttcaatataatattaattacttttttccttttataattctaattaa 14259681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 353
Target Start/End: Original strand, 20369216 - 20369269
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattactttttt 353  Q
    ||||||||| |||||| ||||| |||||||||||||| ||||||||||||||||    
T  20369216 gtcccaaaaaaattgactcatttcacttttcaatacaatattaattactttttt 20369269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 442
Target Start/End: Original strand, 31090262 - 31090387
Alignment:
Q  317 tcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacat 416  Q
    ||||| |||||||||||||| |||||||||||||||| |  | ||||| |||||||| |||||||  | || |  |||||| |||||||| ||||| | |    
T  31090262 tcatttcacttttcaatacaatattaattactttttttcaatcataacactaattaatactactttcaacactctcaattccatatattctactttgcgt 31090361  T
Q  417 ttatgatagtagagaatgcaccaata 442  Q
    ||||||||    ||||||||||||||    
T  31090362 ttatgataaagaagaatgcaccaata 31090387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 450
Target Start/End: Original strand, 15254764 - 15254856
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    |||||||||||||||| | |||||  |||| || ||||||||||||||| | ||| |||| |||||||  |||||||||| ||||| ||||||    
T  15254764 ttataactctaattaatattactttcatcactttcaattcaatatattctaatttgcattaatgatagcggagaatgcactaatacataacaa 15254856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 442
Target Start/End: Complemental strand, 25344838 - 25344763
Alignment:
Q  367 taattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaata 442  Q
    ||||||| |||||||  ||||||  ||||||||||||||| ||||||||||||||||| | | |||||||| ||||    
T  25344838 taattaatactactttcatcattctcaattcaatatattctactttacatttatgataatggtgaatgcactaata 25344763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 304 - 424
Target Start/End: Complemental strand, 30437904 - 30437782
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaaca--ctacttaaatcatttccaattcaata 401  Q
    ||||| || ||||||||| ||||||| |||||| ||||||||||||||||    |||||||||||||||| |   |||||  |||| |||| ||  |||     
T  30437904 caaaacaactgagtcatttcacttttaaatacaatattaattacttttttttaattataactctaattaatattttactttcatcacttccgatataatc 30437805  T
Q  402 tattccactttacatttatgata 424  Q
    ||||| |||||||||||||||||    
T  30437804 tattctactttacatttatgata 30437782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 424
Target Start/End: Original strand, 5072896 - 5073015
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    |||||| ||||||  |||| ||||||||||||||  | |||||| |||||  |  |||||||||||||||| |||||||  ||   | ||||||||||||    
T  5072896 ccaaaaaaattgatccatttcacttttcaatacaacaataattatttttt--caattataactctaattaatactacttccattgctcccaattcaatat 5072993  T
Q  403 attccactttacatttatgata 424  Q
    |||  |||||||||||||||||    
T  5072994 attttactttacatttatgata 5073015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 420
Target Start/End: Complemental strand, 7179617 - 7179527
Alignment:
Q  330 caatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttat 420  Q
    ||||||| ||||||||| |||||||   ||||||||||||||||  |||||   ||||||  ||||||||||||||| ||||| |||||||    
T  7179617 caatacaatattaattatttttttctagttataactctaattaatgctactctcatcattctcaattcaatatattctactttgcatttat 7179527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 424
Target Start/End: Complemental strand, 19889642 - 19889576
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    |||||||||||||||| | |||||  | || || ||||||||||||||| |||||||||||||||||    
T  19889642 ttataactctaattaatattactttcaccactttcaattcaatatattctactttacatttatgata 19889576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 424
Target Start/End: Original strand, 43525477 - 43525543
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    |||||||||||||||| |||||||  | || ||||||||||| |||||  |||||||||||||||||    
T  43525477 ttataactctaattaatactactttcaccacttccaattcaacatattatactttacatttatgata 43525543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 16954893 - 16954949
Alignment:
Q  387 atttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatact 444  Q
    |||||||||||||||||||| | |||||||||||||||  | ||||||||||||||||    
T  16954893 atttccaattcaatatattctattttacatttatgata-aaaagaatgcaccaatact 16954949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 468
Target Start/End: Original strand, 35988666 - 35988742
Alignment:
Q  391 ccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||||| ||||| |||||||||||  |  |||||||||||||||| ||||   |||||||||||||||    
T  35988666 ccaattcaatatattcaactttgcatttatgataagaatgaatgcaccaatacttgacaa-cacacttaaaactattt 35988742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 381
Target Start/End: Complemental strand, 39036021 - 39035941
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactactt 381  Q
    ||||||||| |||| | ||||| |||||||||||||| |||||||||| ||||||   ||||||| |||||||| |||||||    
T  39036021 gtcccaaaa-aattaattcatttcacttttcaatacaatattaattacctttttctacttataacactaattaaaactactt 39035941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 424
Target Start/End: Original strand, 31956675 - 31956795
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||||||   ||| ||||||| |||  | |||||||||||||||| |   |||||||||||||||| | |||||  |||| |  ||| ||||||||    
T  31956675 aaaataattgatctatttcactttttaatgaaatattaattactttttttctaattataactctaattaatattacttttatcactctcaactcaatata 31956774  T
Q  404 ttccactttacatttatgata 424  Q
    ||| |||||||||||||||||    
T  31956775 ttcaactttacatttatgata 31956795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 424
Target Start/End: Original strand, 42479508 - 42479607
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgat 423  Q
    ||||||||||| | |||||||||||||||| |  |||||||| |||||||   |||||  ||||||| ||||| |||||||| || ||| ||||||||||    
T  42479508 acttttcaataaaatattaattactttttt-caattataactataattaatgttacttttatcattttcaatttaatatattgcattttgcatttatgat 42479606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 468
Target Start/End: Complemental strand, 7311254 - 7311179
Alignment:
Q  393 aattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||||| ||||| ||||||||||| | |  ||||||| ||||||| | ||| ||||||||||| ||||    
T  7311254 aattcaatatattctactttgcatttatgataatggtaaatgcacaaatacttgataagagcacttaaaaccattt 7311179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 373
Target Start/End: Original strand, 24534553 - 24534616
Alignment:
Q  310 aattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaa 373  Q
    |||||| | ||| |||||||||||||| |||||||||||||||| |  ||||||| ||||||||    
T  24534553 aattgattaatttcacttttcaatacaatattaattactttttttcaattataacactaattaa 24534616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 468
Target Start/End: Complemental strand, 39060500 - 39060421
Alignment:
Q  389 ttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||| ||||||| || ||||| |||||||||||    |||||| ||||||||||||||| |||||| ||||| ||||    
T  39060500 ttccaatacaatatagtctactttgcatttatgataaagaagaatggaccaatacttaacaaatgcactcaaaaccattt 39060421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 468
Target Start/End: Complemental strand, 6173089 - 6172979
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcact 457  Q
    |||||||| ||||||| |||||||  |||| |  ||||||||||||||  ||||| ||||||||||| | |  ||||||  |||| || | ||| |||||    
T  6173089 ttataactataattaatactactttcatcactcacaattcaatatattatactttgcatttatgataatggtaaatgcattaatatttgataagagcact 6172990  T
Q  458 taaaactattt 468  Q
    |||||||||||    
T  6172989 taaaactattt 6172979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 463
Target Start/End: Complemental strand, 33498639 - 33498498
Alignment:
Q  324 acttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaat--atattccactttacatttatg 421  Q
    |||||||||| || ||||||||| |||||||   |||||||||||||||| || ||||   |||||  ||||| |||  |||||| ||||| ||||||||    
T  33498639 acttttcaatgcaatattaattatttttttctaattataactctaattaatacaactttcttcattctcaatttaatacatattctactttgcatttatg 33498540  T
Q  422 atagtagagaatgcaccaatacttaacaagtgcacttaaaac 463  Q
     || | |  |||||| |||||||| ||||| ||| |||||||    
T  33498539 ttaatggtaaatgcagcaatacttgacaagagcatttaaaac 33498498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 451
Target Start/End: Original strand, 43572984 - 43573098
Alignment:
Q  338 tattaattacttttttccctttata-actctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgca 436  Q
    |||||||||| | |||||  ||||| ||| ||||||| |||| ||  |||| | |||||||||||| | ||||||| ||||||||||  | | |||||||    
T  43572984 tattaattacctatttccaattatacactataattaatactaatttcatcactcccaattcaatatctcccactttgcatttatgatcatggtgaatgca 43573083  T
Q  437 ccaatacttaacaag 451  Q
    ||||||||| |||||    
T  43573084 ccaatacttgacaag 43573098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 14184199 - 14184142
Alignment:
Q  317 tcattccacttttcaatacagtattaattactt-ttttccctttataactctaattaa 373  Q
    ||||| |||||||||||||| |||||||||||| ||||||  |||||||| |||||||    
T  14184199 tcatttcacttttcaatacaatattaattactttttttccaattataactataattaa 14184142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 468
Target Start/End: Original strand, 35666922 - 35666994
Alignment:
Q  396 tcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||||| |||||  |||||| ||| | |  ||||||||||||||||| ||  ||||||||||||||||    
T  35666922 tcaatatattctactttgtatttataataatggtaaatgcaccaatacttaagaaaagcacttaaaactattt 35666994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 38978696 - 38978744
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattact 348  Q
    ||||||||||||||||  |||| |||||||||||||| ||| |||||||    
T  38978696 gtcccaaaataattgatccatttcacttttcaatacaatatcaattact 38978744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 336
Target Start/End: Complemental strand, 41686658 - 41686622
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaataca 336  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  41686658 gtcccaaaataactgagtcatttcacttttcaataca 41686622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 338 - 468
Target Start/End: Original strand, 14435 - 14565
Alignment:
Q  338 tattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcac 437  Q
    |||||||||||||||||| ||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||||||||||||| ||| |||||||||     
T  14435 tattaattacttttttccttttataactctaattaatactactttcatcattttcaattcaatatattccactttacatttatgacagtggagaatgcat 14534  T
Q  438 caatacttaacaagtgcacttaaaactattt 468  Q
    ||||||||| |||||||| ||||||||||||    
T  14535 caatacttagcaagtgcaattaaaactattt 14565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 300 - 463
Target Start/End: Original strand, 229765 - 229927
Alignment:
Q  300 gtcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaa 399  Q
    ||||||||||||  |||| ||| |||||| ||||||| ||||||||| ||||| |||||||||||||||||||| |||||||  |  | |||||||||||    
T  229765 gtcccaaaataacagagttatttcacttt-caatacaatattaattattttttcccctttataactctaattaatactactttcacaacttccaattcaa 229863  T
Q  400 tatattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaac 463  Q
    ||||| ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||||||    
T  229864 tatataccactttgcatttatgataatggagaatgcaccaatacttaacaagagcacttaaaac 229927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 301 - 468
Target Start/End: Complemental strand, 9714 - 9550
Alignment:
Q  301 tcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaat 400  Q
    |||||||||||  |||| ||| |||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||  |||| |  ||||||       
T  9714 tcccaaaataacagagtaatttcacttttcaatacaatattaattactattttccctttataactctaattaatactactttcatcactctcaattc--- 9618  T
Q  401 atattccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    |||||||||||| ||||||||||| | |||||| ||  ||||||||||||| ||||||||||| ||||    
T  9617 atattccactttgcatttatgataatggagaatacattaatacttaacaagagcacttaaaaccattt 9550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 338 - 442
Target Start/End: Original strand, 26301 - 26405
Alignment:
Q  338 tattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcac 437  Q
    |||||||||||||||||| ||||||||||||||||| | |||||  ||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  26301 tattaattacttttttccttttataactctaattaatattacttttatcatttccaattcaatatattccactttacatttatgatagtggataatgcac 26400  T
Q  438 caata 442  Q
     ||||    
T  26401 taata 26405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 303 - 450
Target Start/End: Original strand, 394723 - 394869
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatat 402  Q
    ||||||||| |||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||||||| |||||||  |||| |  ||||||| |||    
T  394723 ccaaaataagtgagtcattc-actcttcaatacatcattaattacttttttccctttataactctaattaatactactttcatcactctcaattcactat 394821  T
Q  403 attccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    ||||||||||  |||||||||||   |||||  |||||||||||||||    
T  394822 attccactttgtatttatgatagagaagaatagaccaatacttaacaa 394869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 230202 - 230365
Alignment:
Q  304 caaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatata 403  Q
    |||||||| ||||||||| |||||||||||||| ||||||||| |||||||  ||||||||||||||||| | |||||  |  | |||||||||||||||    
T  230202 caaaataactgagtcatttcacttttcaatacaatattaattatttttttct-tttataactctaattaatattactttcacaacttccaattcaatata 230300  T
Q  404 ttccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattt 468  Q
    ||||| ||| |||||||||||  |||||||| ||| || |||||||||   ||||||||| ||||    
T  230301 ttccattttgcatttatgataacagagaatgtacccatgcttaacaagaatacttaaaaccattt 230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 157973 - 158050
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactactta 382  Q
    |||| ||||||  |||| |||||||||||||| ||||||||| |||||| |  |||||||||||||||| | ||||||    
T  157973 aaaaaaattgacccatttcacttttcaatacaatattaattattttttttcaattataactctaattaatattactta 158050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 341 - 449
Target Start/End: Original strand, 8869 - 8977
Alignment:
Q  341 taattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaa 440  Q
    |||||| | |||| ||||||||||||||||||| | |||||  ||||||  ||||||||||||||||||||| ||||||| ||||| |||||||||||||    
T  8869 taattattatttttcctttataactctaattaatattactttcatcattctcaattcaatatattccactttgcatttataatagtggagaatgcaccaa 8968  T
Q  441 tacttaaca 449  Q
    ||| |||||    
T  8969 tacataaca 8977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 424
Target Start/End: Complemental strand, 10926 - 10833
Alignment:
Q  331 aatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    |||||| ||||||||| ||||||||  ||||||  |||||||| |||||||  | || | | |||||||||||||  ||||| |||||||||||    
T  10926 aatacaatattaattatttttttccaattataaaactaattaatactactttcaccactcctaattcaatatattttactttgcatttatgata 10833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 462
Target Start/End: Original strand, 98805 - 98928
Alignment:
Q  338 tattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcac 437  Q
    ||||||||||||||| |||||||||||||||||||| | || ||  |||| |  |||||||||||||||||||||| |||||| || || || |||||||    
T  98805 tattaattacttttt-ccctttataactctaattaatattattttcatcactctcaattcaatatattccactttatatttattatggtggataatgcac 98903  T
Q  438 caatacttaacaagtgcacttaaaa 462  Q
    ||||||||| |||| ||||||||||    
T  98904 caatacttatcaagagcacttaaaa 98928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 301 - 448
Target Start/End: Original strand, 26550 - 26702
Alignment:
Q  301 tcccaaaataattgagtcattccacttttcaatacagtattaa----ttact-tttttccctttataactctaattaacactacttaaatcatttccaat 395  Q
    ||||||||||| ||||||||| ||||||||||||||  || ||    ||| | ||||||| ||||||| ||||||||| |||||||  |||| |  ||||    
T  26550 tcccaaaataaatgagtcatttcacttttcaatacatcatcaactttttattatttttccatttataattctaattaatactactttcatcactcgcaat 26649  T
Q  396 tcaatatattccactttacatttatgatagtagagaatgcaccaatacttaac 448  Q
    ||||||||||||||||| ||||||||||||| ||||||  |||||||||||||    
T  26650 tcaatatattccactttgcatttatgatagtggagaatagaccaatacttaac 26702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 451
Target Start/End: Original strand, 171169 - 171318
Alignment:
Q  301 tcccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaat 400  Q
    ||||||||||| |||  ||||| ||||||||||| | |||||||||||||||| |  |||||||||  ||||| | |||||  |||| | | ||||||||    
T  171169 tcccaaaataactgatccattc-acttttcaatataatattaattactttttttcaattataactcatattaatattactttcatcactcctaattcaat 171267  T
Q  401 atattccactttacatttatgatagtagagaatgcaccaatacttaacaag 451  Q
    |||||| ||||||||||||||||| | |  || |||||||||||| |||||    
T  171268 atattctactttacatttatgataatggtaaacgcaccaatacttgacaag 171318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 424
Target Start/End: Original strand, 5765 - 5883
Alignment:
Q  305 aaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatat 404  Q
    ||||||||||| | |||  | ||||||||| | ||||||||| |||||||| ||||||||| ||||||| |||||||  | || |  |||||||||||||    
T  5765 aaaataattgaattattttatttttcaataaaatattaatta-ttttttccatttataactttaattaatactactttcaccactctcaattcaatatat 5863  T
Q  405 tccactttacatttatgata 424  Q
    || |||||||||||||||||    
T  5864 tctactttacatttatgata 5883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 424
Target Start/End: Complemental strand, 8097 - 7996
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatga 422  Q
    |||||||||||||| ||| ||||||||||| ||  |||||||| ||||||| |||||||  |  |||  ||||||||||||||  |||||||||||||||    
T  8097 cacttttcaatacaatatcaattactttttcccaattataactttaattaatactactttcacaattctcaattcaatatattttactttacatttatga 7998  T
Q  423 ta 424  Q
    ||    
T  7997 ta 7996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 450
Target Start/End: Complemental strand, 352589 - 352477
Alignment:
Q  339 attaattact-tttttccctttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcac 437  Q
    |||||||||| |||||||  ||||||||||| |||| | |||||  |  | | |||||||||||||||| |||||||||||||||||    |||||||||    
T  352589 attaattactatttttccaattataactctatttaatattactttcactactcccaattcaatatattctactttacatttatgataaagaagaatgcac 352490  T
Q  438 caatacttaacaa 450  Q
    |||||||||||||    
T  352489 caatacttaacaa 352477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 445
Target Start/End: Complemental strand, 6541 - 6421
Alignment:
Q  326 ttttcaatacagtattaattacttttttccct-ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgata 424  Q
    |||||||||||  |||||||||||||||  |  |||||||||||||||| | |||||  | || |  ||||||||||||||  |||||||||||||||||    
T  6541 ttttcaatacaacattaattacttttttttcaattataactctaattaatattactttcaccactctcaattcaatatattttactttacatttatgata 6442  T
Q  425 gtagagaatgcaccaatactt 445  Q
        |||||||| ||||||||    
T  6441 aagaagaatgcatcaatactt 6421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 450
Target Start/End: Complemental strand, 12544 - 12452
Alignment:
Q  358 ttataactctaattaacactacttaaatcatttccaattcaatatattccactttacatttatgatagtagagaatgcaccaatacttaacaa 450  Q
    |||||||||||||||| |||||||  | ||||   |||||||||||||| ||||||||||||| |||    ||||||||| ||||||| ||||    
T  12544 ttataactctaattaatactactttcaccattcttaattcaatatattctactttacatttataataaagaagaatgcactaatacttgacaa 12452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 381
Target Start/End: Original strand, 3993 - 4051
Alignment:
Q  323 cacttttcaatacagtattaattacttttttccctttataactctaattaacactactt 381  Q
    ||||||||||| || |||||||||| ||||| |  |||||||||||||||| |||||||    
T  3993 cacttttcaatgcaatattaattaccttttttcaattataactctaattaatactactt 4051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 364
Target Start/End: Original strand, 219947 - 220008
Alignment:
Q  303 ccaaaataattgagtcattccacttttcaatacagtattaattacttttttccctttataac 364  Q
    |||||| ||||||  ||||  ||||||||||||||||||| ||||||||||||  |||||||    
T  219947 ccaaaaaaattgacacattttacttttcaatacagtattatttacttttttccaattataac 220008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University