View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0938_low_8 (Length: 352)
Name: NF0938_low_8
Description: NF0938
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0938_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 52 - 308
Target Start/End: Complemental strand, 2625800 - 2625543
Alignment:
| Q |
52 |
tatttgtattcttgcacattaataatcacatcgttcgacattagtacttgtattcttttacgtgaatcaccataaataattcatatttattaaatatcct |
151 |
Q |
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| T |
2625800 |
tatttatattcttgcacattaataatcacatcgttcgacattagtacttgtattcttttacgtgaatcaccataaataattcatatttattaaatatcct |
2625701 |
T |
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| Q |
152 |
tacaaacca-ggatactaatcaaatagtacgattatttacaaactgaaatagaaccattgtagaactacatttatccaagctcgacagctgacaaaaagc |
250 |
Q |
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| T |
2625700 |
tacgaaccaaggatactattcaaatagtacgattatttacaaactgaaattgaaccattgtagaactacatttatccaagctcgacagctgacaaaaagc |
2625601 |
T |
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| Q |
251 |
ctacctacattcatcaaaaagattcataaattgattataatcaagataaatttaagga |
308 |
Q |
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| T |
2625600 |
ctacctaaattcatcaaaaagattcataaattgattataatcaagataaatttaagga |
2625543 |
T |
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