View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0939_low_28 (Length: 389)

Name: NF0939_low_28
Description: NF0939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0939_low_28
NF0939_low_28
[»] chr1 (46 HSPs)
chr1 (76-357)||(7042732-7043013)
chr1 (87-357)||(8969435-8969708)
chr1 (200-357)||(18604828-18604984)
chr1 (232-357)||(17926221-17926346)
chr1 (228-326)||(4490168-4490266)
chr1 (200-326)||(26770125-26770250)
chr1 (200-326)||(31760702-31760827)
chr1 (200-328)||(47533999-47534126)
chr1 (200-326)||(15475980-15476105)
chr1 (200-326)||(37094152-37094277)
chr1 (200-326)||(44054817-44054942)
chr1 (200-326)||(50490803-50490928)
chr1 (200-328)||(25828675-25828802)
chr1 (222-326)||(30361156-30361260)
chr1 (222-326)||(42885268-42885372)
chr1 (200-328)||(46674743-46674870)
chr1 (222-326)||(44234047-44234153)
chr1 (222-328)||(13556075-13556181)
chr1 (200-326)||(48542552-48542677)
chr1 (190-326)||(17580873-17581008)
chr1 (256-328)||(25729975-25730047)
chr1 (228-328)||(40359665-40359765)
chr1 (200-326)||(3770505-3770630)
chr1 (256-326)||(11335643-11335713)
chr1 (256-326)||(11493663-11493733)
chr1 (200-326)||(28226343-28226468)
chr1 (256-326)||(52469488-52469558)
chr1 (222-326)||(6978903-6979007)
chr1 (232-337)||(49740075-49740180)
chr1 (222-326)||(8895623-8895727)
chr1 (184-316)||(15907250-15907381)
chr1 (231-326)||(30159014-30159109)
chr1 (218-336)||(12320214-12320331)
chr1 (222-326)||(20599616-20599720)
chr1 (222-326)||(28068850-28068954)
chr1 (228-326)||(3046763-3046861)
chr1 (228-326)||(35719711-35719810)
chr1 (222-316)||(46234353-46234447)
chr1 (222-328)||(3416304-3416410)
chr1 (200-326)||(3994870-3994994)
chr1 (200-326)||(45502353-45502477)
chr1 (258-323)||(43106594-43106659)
chr1 (228-316)||(49456849-49456937)
chr1 (228-326)||(24180587-24180686)
chr1 (320-359)||(17136840-17136879)
chr1 (296-328)||(641456-641488)
[»] chr5 (23 HSPs)
chr5 (76-355)||(8935762-8936041)
chr5 (222-357)||(8782705-8782840)
chr5 (217-356)||(33570086-33570224)
chr5 (222-326)||(8836552-8836656)
chr5 (200-326)||(3390832-3390957)
chr5 (200-326)||(42675659-42675784)
chr5 (223-326)||(10691933-10692036)
chr5 (200-327)||(36484601-36484727)
chr5 (184-326)||(25031425-25031566)
chr5 (200-328)||(29296186-29296313)
chr5 (222-326)||(15472688-15472792)
chr5 (186-326)||(23191870-23192009)
chr5 (200-328)||(42221725-42221852)
chr5 (200-326)||(33591695-33591820)
chr5 (228-326)||(41743388-41743486)
chr5 (219-326)||(18185763-18185870)
chr5 (231-326)||(27771290-27771385)
chr5 (228-326)||(8335320-8335418)
chr5 (228-326)||(28349035-28349133)
chr5 (200-326)||(35066045-35066169)
chr5 (222-328)||(1420968-1421074)
chr5 (228-326)||(6230225-6230323)
chr5 (290-356)||(25472379-25472445)
[»] chr6 (27 HSPs)
chr6 (86-357)||(2559701-2559974)
chr6 (88-350)||(20554672-20554938)
chr6 (230-357)||(11590217-11590344)
chr6 (222-353)||(9576004-9576135)
chr6 (222-357)||(9224566-9224703)
chr6 (218-357)||(12713108-12713247)
chr6 (200-326)||(8062791-8062916)
chr6 (228-328)||(32938433-32938533)
chr6 (200-326)||(4169666-4169791)
chr6 (200-326)||(4210395-4210520)
chr6 (222-328)||(5545371-5545477)
chr6 (222-332)||(8313783-8313893)
chr6 (200-326)||(17595869-17595994)
chr6 (200-324)||(33131138-33131261)
chr6 (200-327)||(8933810-8933936)
chr6 (200-326)||(33489794-33489919)
chr6 (200-325)||(742856-742980)
chr6 (222-326)||(28914151-28914255)
chr6 (200-326)||(8658989-8659117)
chr6 (228-326)||(10790493-10790591)
chr6 (219-326)||(18676725-18676833)
chr6 (255-326)||(29516667-29516738)
chr6 (222-326)||(34475145-34475249)
chr6 (173-352)||(8978117-8978291)
chr6 (281-334)||(25144160-25144213)
chr6 (293-352)||(24418674-24418733)
chr6 (279-323)||(13889147-13889191)
[»] chr3 (53 HSPs)
chr3 (90-357)||(5218943-5219217)
chr3 (222-357)||(35513084-35513219)
chr3 (200-326)||(20607694-20607819)
chr3 (222-328)||(26717991-26718097)
chr3 (229-337)||(501729-501837)
chr3 (200-328)||(22497239-22497366)
chr3 (200-326)||(1546187-1546312)
chr3 (222-328)||(43218755-43218861)
chr3 (228-328)||(17338509-17338609)
chr3 (222-357)||(41454216-41454351)
chr3 (125-220)||(50744258-50744353)
chr3 (200-326)||(10471357-10471482)
chr3 (200-326)||(30357252-30357377)
chr3 (200-326)||(35846748-35846873)
chr3 (200-326)||(37126634-37126759)
chr3 (200-326)||(43973234-43973359)
chr3 (200-326)||(51754424-51754549)
chr3 (222-328)||(53018980-53019086)
chr3 (229-326)||(37821063-37821160)
chr3 (222-326)||(46528091-46528195)
chr3 (200-328)||(48458385-48458512)
chr3 (219-326)||(28555188-28555295)
chr3 (184-315)||(41114091-41114221)
chr3 (200-326)||(24348804-24348929)
chr3 (222-324)||(24405774-24405876)
chr3 (228-326)||(31655046-31655144)
chr3 (200-326)||(44377783-44377908)
chr3 (200-326)||(51167180-51167305)
chr3 (200-326)||(10049118-10049243)
chr3 (200-326)||(8828619-8828744)
chr3 (200-326)||(10659527-10659652)
chr3 (200-326)||(13286931-13287056)
chr3 (222-326)||(5273604-5273708)
chr3 (222-326)||(2445962-2446066)
chr3 (222-326)||(38252520-38252624)
chr3 (222-326)||(47697769-47697873)
chr3 (200-326)||(8068525-8068650)
chr3 (200-323)||(49804864-49804986)
chr3 (200-326)||(55274150-55274275)
chr3 (256-326)||(26229373-26229443)
chr3 (222-326)||(998342-998446)
chr3 (219-326)||(3019203-3019310)
chr3 (228-324)||(23150742-23150838)
chr3 (207-326)||(12227760-12227879)
chr3 (263-357)||(9126357-9126450)
chr3 (263-357)||(9134464-9134557)
chr3 (200-326)||(9745945-9746069)
chr3 (228-326)||(27449492-27449590)
chr3 (290-352)||(9116497-9116559)
chr3 (280-326)||(26975548-26975594)
chr3 (261-348)||(50744389-50744476)
chr3 (223-293)||(33591124-33591194)
chr3 (306-355)||(7027128-7027177)
[»] chr4 (39 HSPs)
chr4 (179-352)||(41476622-41476794)
chr4 (200-328)||(49332093-49332220)
chr4 (200-328)||(54202330-54202457)
chr4 (200-326)||(17445621-17445746)
chr4 (200-357)||(11308738-11308893)
chr4 (200-328)||(2491831-2491958)
chr4 (200-316)||(45884570-45884685)
chr4 (200-324)||(50621666-50621789)
chr4 (222-325)||(35949484-35949587)
chr4 (219-328)||(27767614-27767723)
chr4 (200-328)||(11005613-11005740)
chr4 (200-324)||(36308964-36309087)
chr4 (200-328)||(56162473-56162600)
chr4 (228-326)||(3875653-3875751)
chr4 (228-326)||(22169111-22169209)
chr4 (200-326)||(24744951-24745076)
chr4 (201-326)||(3874532-3874656)
chr4 (200-326)||(3931949-3932075)
chr4 (219-357)||(11381898-11382037)
chr4 (231-326)||(36225124-36225219)
chr4 (222-328)||(26488351-26488456)
chr4 (200-326)||(39677666-39677791)
chr4 (232-326)||(7327688-7327782)
chr4 (222-349)||(43957841-43957968)
chr4 (222-348)||(44878022-44878148)
chr4 (256-326)||(28573784-28573854)
chr4 (228-326)||(36432475-36432572)
chr4 (223-328)||(29933516-29933621)
chr4 (200-345)||(7326399-7326544)
chr4 (222-326)||(7554422-7554526)
chr4 (200-324)||(29923605-29923728)
chr4 (200-326)||(28867676-28867801)
chr4 (228-326)||(33961789-33961887)
chr4 (256-326)||(20492505-20492575)
chr4 (222-324)||(55541828-55541930)
chr4 (219-326)||(55282451-55282558)
chr4 (231-316)||(41764681-41764765)
chr4 (302-352)||(23115277-23115327)
chr4 (284-352)||(7818464-7818532)
[»] chr8 (29 HSPs)
chr8 (232-354)||(5458233-5458355)
chr8 (228-326)||(25487249-25487347)
chr8 (200-326)||(27719243-27719368)
chr8 (222-328)||(45084244-45084350)
chr8 (222-326)||(20818956-20819060)
chr8 (200-328)||(38098782-38098909)
chr8 (200-326)||(35393519-35393644)
chr8 (219-356)||(1104960-1105097)
chr8 (222-326)||(26416318-26416422)
chr8 (228-326)||(8352381-8352479)
chr8 (200-326)||(30700014-30700139)
chr8 (200-324)||(30655004-30655127)
chr8 (228-326)||(12986672-12986770)
chr8 (219-357)||(13174207-13174346)
chr8 (200-326)||(483155-483280)
chr8 (200-326)||(11020404-11020529)
chr8 (184-326)||(24757750-24757890)
chr8 (200-326)||(29997495-29997620)
chr8 (222-326)||(36781653-36781757)
chr8 (200-354)||(18574772-18574920)
chr8 (222-326)||(20187473-20187577)
chr8 (222-326)||(20206542-20206646)
chr8 (200-326)||(33411046-33411172)
chr8 (228-326)||(39780313-39780412)
chr8 (256-326)||(31097516-31097586)
chr8 (228-324)||(32834592-32834688)
chr8 (142-300)||(20524969-20525125)
chr8 (279-336)||(29225977-29226034)
chr8 (282-352)||(16584399-16584468)
[»] chr2 (30 HSPs)
chr2 (200-328)||(2380291-2380418)
chr2 (184-326)||(33965429-33965570)
chr2 (200-326)||(26479852-26479977)
chr2 (200-328)||(19390571-19390698)
chr2 (87-223)||(18375744-18375884)
chr2 (222-328)||(12242742-12242848)
chr2 (200-326)||(21866983-21867108)
chr2 (200-326)||(25336526-25336651)
chr2 (200-324)||(39430259-39430382)
chr2 (222-326)||(4049461-4049564)
chr2 (200-326)||(41568706-41568831)
chr2 (228-326)||(8113689-8113787)
chr2 (200-326)||(11124333-11124458)
chr2 (200-326)||(14287451-14287576)
chr2 (200-326)||(30787143-30787268)
chr2 (200-324)||(2357341-2357464)
chr2 (86-223)||(18924990-18925130)
chr2 (184-326)||(2372076-2372217)
chr2 (200-326)||(20115063-20115188)
chr2 (228-326)||(31547301-31547399)
chr2 (222-326)||(17977767-17977872)
chr2 (184-326)||(11978764-11978905)
chr2 (228-326)||(6034413-6034512)
chr2 (228-324)||(1222650-1222746)
chr2 (290-352)||(43652906-43652968)
chr2 (282-326)||(17435356-17435400)
chr2 (277-330)||(932072-932125)
chr2 (127-220)||(9729418-9729511)
chr2 (278-330)||(9141715-9141767)
chr2 (281-325)||(35006464-35006508)
[»] scaffold0081 (1 HSPs)
scaffold0081 (226-357)||(11081-11212)
[»] chr7 (27 HSPs)
chr7 (200-328)||(40431280-40431407)
chr7 (204-326)||(47020478-47020599)
chr7 (200-328)||(42076334-42076461)
chr7 (222-357)||(3112101-3112236)
chr7 (200-326)||(3887672-3887797)
chr7 (200-326)||(5544309-5544434)
chr7 (200-326)||(9741231-9741356)
chr7 (200-326)||(18676761-18676886)
chr7 (200-326)||(31587923-31588048)
chr7 (222-328)||(42697406-42697512)
chr7 (222-326)||(47455052-47455156)
chr7 (222-326)||(30888418-30888522)
chr7 (228-324)||(31621940-31622036)
chr7 (200-326)||(44508505-44508631)
chr7 (200-326)||(12726223-12726348)
chr7 (222-326)||(44291054-44291158)
chr7 (231-326)||(9870437-9870532)
chr7 (200-318)||(44061818-44061935)
chr7 (200-326)||(12848442-12848567)
chr7 (200-326)||(41118782-41118907)
chr7 (277-356)||(38168128-38168207)
chr7 (200-326)||(40186711-40186836)
chr7 (256-316)||(40190129-40190188)
chr7 (275-326)||(38743302-38743353)
chr7 (290-357)||(39494855-39494922)
chr7 (222-337)||(27419059-27419174)
chr7 (277-325)||(37544993-37545041)
[»] scaffold0548 (1 HSPs)
scaffold0548 (200-357)||(5228-5383)
[»] scaffold0189 (1 HSPs)
scaffold0189 (222-328)||(27833-27939)
[»] scaffold0562 (2 HSPs)
scaffold0562 (228-326)||(6472-6570)
scaffold0562 (201-326)||(5351-5475)
[»] scaffold1360 (1 HSPs)
scaffold1360 (200-326)||(944-1070)
[»] scaffold0025 (1 HSPs)
scaffold0025 (254-326)||(20394-20466)
[»] scaffold0041 (1 HSPs)
scaffold0041 (200-326)||(105706-105831)
[»] scaffold0057 (1 HSPs)
scaffold0057 (200-326)||(42682-42804)


Alignment Details
Target: chr1 (Bit Score: 242; Significance: 1e-134; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 76 - 357
Target Start/End: Original strand, 7042732 - 7043013
Alignment:
Q  76 atcatagggtcgataaatagaaactcgaagaaatttacgaaattcactcgtatgaatcgagtacttatcaatggaatagatgttgattcaattgatgatt 175  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7042732 atcatagggccgataaatagaaactcgaagaaatttatgaaattcactcgtatgaatcgagtacttatcaatggaatagatgttgattcaattgatgatt 7042831  T
Q  176 tttgtaggtattgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaa 275  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||    
T  7042832 tttgtaggtattgattgcatatccatggtggtttgtgggtgaaaaaggggtgagggttcaaaatgataatgaaagaatggtttttagaaatttacatgaa 7042931  T
Q  276 gaggacaattttgatattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaagagtc 357  Q
    |||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  7042932 gagggcaattttggtattattgtaagattttaaataaatttaggtgtaactagaattatatggggtgagactagaaagagtc 7043013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 87 - 357
Target Start/End: Complemental strand, 8969708 - 8969435
Alignment:
Q  87 gataaatagaaactcgaagaaatttacgaaattcactc----gtatgaatcgagtacttatcaatggaatagatgttgattcaattgatgatttttgtag 182  Q
    |||||||||||| ||| ||||||||| ||||||||||     ||||||||||||||| ||||||||||| |||||||||||||||||  |||||| ||||    
T  8969708 gataaatagaaattcggagaaatttatgaaattcacttacttgtatgaatcgagtacgtatcaatggaagagatgttgattcaattggcgattttagtag 8969609  T
Q  183 gtattgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggaca 282  Q
    |||||||||||||||  ||||||||||||| | ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||  |    
T  8969608 gtattgattgcatatctatggtggtttgtgcgagaaaa-ggggtgagggttcagaatgataatgaaagaaggatttttagaaatttacatgaagagggaa 8969510  T
Q  283 attttgatattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaagagtc 357  Q
    |||||  ||||||||||| |||||||||||||||| || |||||||||||||||||  | |||||| ||||||||    
T  8969509 attttagtattattgtaaaattttaaataaatttgagtataactagaattatatgggataagactaaaaagagtc 8969435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 200 - 357
Target Start/End: Complemental strand, 18604984 - 18604828
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||||||||||||||||||| || |||||  | ||||||| |||||||| ||||||| |||||||| ||||||||||    
T  18604984 atggtgatttgtggatgaaat-ggggtgagggttcagaatgatcataaaagatgggtttttagtaatttacatgaagagggcaattttggtattattgta 18604886  T
Q  300 agattttaaataaatttgggtgtaactagaattatatggagtgagactagaaagagtc 357  Q
    | ||||||||||||||| |||||||| |||||||||||| |||||||||| |||||||    
T  18604885 aaattttaaataaatttaggtgtaaccagaattatatggggtgagactagcaagagtc 18604828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 232 - 357
Target Start/End: Original strand, 17926221 - 17926346
Alignment:
Q  232 ttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaactagaat 331  Q
    ||||||||||| || |||||  | |||||||||||||||| ||| | |||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  17926221 ttcagaatgatcataaaagatgggtttttagaaatttacacgaacatgacaattttggtattattgtaaaattttaaataaatttgggtgtaactagaat 17926320  T
Q  332 tatatggagtgagactagaaagagtc 357  Q
    ||||||| |||||| ||| |||||||    
T  17926321 tatatggggtgagagtagcaagagtc 17926346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 4490168 - 4490266
Alignment:
Q  228 agggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || ||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4490168 agggttcagaatgatcataaaaga-tgagtttttagaaatttacatgaagaggacaattttgatattattgtaaaattttaaataaatttgggtgtaact 4490266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 26770125 - 26770250
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||||||||||||| ||||||| |||||||| ||||||||||    
T  26770125 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtattattgta 26770223  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  26770224 aaattttaaataaatttgggtgtaact 26770250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 31760702 - 31760827
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||||||||||||| ||||||||||||||| |||||||||||    
T  31760702 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagaggacaatttttatattattgta 31760800  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||| ||||||||    
T  31760801 aaattttaaataaatttgagtgtaact 31760827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 200 - 328
Target Start/End: Complemental strand, 47534126 - 47533999
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||| ||| || |||||  | |||||| ||||||||| |||||||||||||||||||||||||||    
T  47534126 atggtgatttgtggatgaaag-ggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttgatattattgta 47534028  T
Q  300 agattttaaataaatttgggtgtaactag 328  Q
    | |||||||||||||||| ||||||||||    
T  47534027 aaattttaaataaatttgagtgtaactag 47533999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 15475980 - 15476105
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| |||||||||||||||||| |||||  | |||||| ||||||||| ||||||| |||||||  ||||||||||    
T  15475980 atggtgatttgtggatgaaag-ggggtaagggttcagaatgataataaaagatgggtttttaaaaatttacatgaagagggcaatttttgtattattgta 15476078  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  15476079 aaattttaaataaatttgggtgtaact 15476105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 37094152 - 37094277
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| |||||||||||||||  | |||||  | |||||| ||||||||| |||||||||||||||| ||||||||||    
T  37094152 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcgtaaaagaggggtttttaaaaatttacatgaagaggacaattttggtattattgta 37094250  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  37094251 aaattttaaataaatttgggtgtaact 37094277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 44054817 - 44054942
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||| ||||| |||||||| |||||| || |||||  | |||||||||||||||| ||||||| |||||||| ||||||||||    
T  44054817 atggtgatttgtggatgaaaa-ggggtaagggttcaaaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtattattgta 44054915  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||| |||||||||    
T  44054916 aaattttaaataaatttaggtgtaact 44054942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 50490928 - 50490803
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  50490928 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 50490830  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  50490829 aaattttaaataaatttgggtgtaact 50490803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 200 - 328
Target Start/End: Complemental strand, 25828802 - 25828675
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgt 298  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || ||||| ||| |||||| ||||||||| ||||||| |||||||| |||||||||    
T  25828802 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaaga-tgagtttttaaaaatttacatgaagagggcaattttggtattattgt 25828705  T
Q  299 aagattttaaataaatttgggtgtaactag 328  Q
    || |||||||||||||||||||||||||||    
T  25828704 aaaattttaaataaatttgggtgtaactag 25828675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 30361260 - 30361156
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  |||||||||||||||||| ||||||  |||||||||||||||||||| ||||||||||||||||  ||    
T  30361260 ggggtaagggttcagaatgatcataaaagatggatttttagaaatttacatgaagagagcaattttgatattattgtaaaattttaaataaatttgaatg 30361161  T
Q  322 taact 326  Q
    |||||    
T  30361160 taact 30361156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 42885372 - 42885268
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||| ||||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  42885372 ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaatttttgtattattgtaaaattttaaataaatttgggtg 42885273  T
Q  322 taact 326  Q
    |||||    
T  42885272 taact 42885268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 328
Target Start/End: Complemental strand, 46674870 - 46674743
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  |  ||||| ||||||||| |||||||||||||||| ||||||||||    
T  46674870 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggattttaaaaatttacatgaagaggacaattttggtattattgta 46674772  T
Q  300 agattttaaataaatttgggtgtaactag 328  Q
    | ||||||||||||||| |||||||||||    
T  46674771 aaattttaaataaatttaggtgtaactag 46674743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 44234047 - 44234153
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttg--atattattgtaagattttaaataaatttggg 319  Q
    ||||| ||||||||||||||| || |||||  | |||||||||||||||| ||||||| ||||||||  |||||||||||| ||||||||||||||||||    
T  44234047 ggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtatattattgtaaaattttaaataaatttggg 44234146  T
Q  320 tgtaact 326  Q
    |||||||    
T  44234147 tgtaact 44234153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 13556181 - 13556075
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||| ||||| ||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  13556181 ggggtaagggttcagaatgatcataaaagatgggtttttaaaaattgacatgaagagggcaattttggtattattgtaaaattttaaataaatttgggtg 13556082  T
Q  322 taactag 328  Q
    |||||||    
T  13556081 taactag 13556075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 48542552 - 48542677
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||    |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  48542552 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgtgtttttaaaaatttacatgaagagggcaattttggtattattgta 48542650  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  48542651 aaattttaaataaatttgggtgtaact 48542677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 190 - 326
Target Start/End: Original strand, 17580873 - 17581008
Alignment:
Q  190 ttgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttga 289  Q
    ||||||||  |||||| ||||||| |||||  ||||| || |||||||||||| || |||||  | |||||||||| ||||| |||||| |||||||||     
T  17580873 ttgcatatctatggtgatttgtggatgaaag-ggggtaagagttcagaatgatcataaaagataggtttttagaaaattacatgaagagaacaattttgg 17580971  T
Q  290 tattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  17580972 tattattgtaaaattttaaataaatttggatgtaact 17581008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 25729975 - 25730047
Alignment:
Q  256 tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaactag 328  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  25729975 tttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 25730047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 228 - 328
Target Start/End: Complemental strand, 40359765 - 40359665
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaacta 327  Q
    ||||||||||| ||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  40359765 agggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttgggtgtaacta 40359666  T
Q  328 g 328  Q
    |    
T  40359665 g 40359665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 3770630 - 3770505
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||| | |||||||| ||||||||||    
T  3770630 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaaggcaattttggtattattgta 3770532  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||| |||||||||    
T  3770531 aaattttaaataaatttaggtgtaact 3770505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 11335643 - 11335713
Alignment:
Q  256 tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11335643 tttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 11335713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 11493663 - 11493733
Alignment:
Q  256 tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11493663 tttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 11493733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 28226343 - 28226468
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| |||||||||||| || || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  28226343 atggtgatttgtggatgaaag-ggggtaagggttcagaataatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 28226441  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||| |||||||||    
T  28226442 aaattttaaataaatttaggtgtaact 28226468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 52469488 - 52469558
Alignment:
Q  256 tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  52469488 tttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 52469558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 6979007 - 6978903
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggt 320  Q
    ||||| || |||||||||||| || ||||| ||| |||||| ||||||||| ||||| | |||||||||||||||||||| |||||||||||||||||||    
T  6979007 ggggtaagagttcagaatgatcataaaaga-tgagtttttaaaaatttacatgaagaaggcaattttgatattattgtaaaattttaaataaatttgggt 6978909  T
Q  321 gtaact 326  Q
    ||||||    
T  6978908 gtaact 6978903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 49740180 - 49740075
Alignment:
Q  232 ttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaactagaat 331  Q
    ||||||||||| ||  ||||  | |||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||   ||||||||||||    
T  49740180 ttcagaatgattatataagatgggtttttagaaatttacatgaacatgacaattttgatattattgtaaaattttaaataaatttaaatgtaactagaat 49740081  T
Q  332 tatatg 337  Q
    ||||||    
T  49740080 tatatg 49740075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 8895727 - 8895623
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| || ||||| |||||| || |||||  | |||||| ||||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  8895727 ggggtaagagttcataatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttagtattattgtaaaattttaaataaatttgggtg 8895628  T
Q  322 taact 326  Q
    |||||    
T  8895627 taact 8895623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 316
Target Start/End: Complemental strand, 15907381 - 15907250
Alignment:
Q  184 tattgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaa 283  Q
    ||||||||||| ||  |||||| ||||||| |||||  ||||| |||||||| |||||| || |||||  | |||||| ||||||||| ||||||| |||    
T  15907381 tattgattgcacatctatggtgatttgtggatgaaag-ggggtaagggttcaaaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaa 15907283  T
Q  284 ttttgatattattgtaagattttaaataaattt 316  Q
    ||||| ||||||||||| |||||||||||||||    
T  15907282 ttttggtattattgtaaaattttaaataaattt 15907250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 231 - 326
Target Start/End: Complemental strand, 30159109 - 30159014
Alignment:
Q  231 gttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    |||||||||||| || ||||| ||| |||||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  30159109 gttcagaatgatcataaaaga-tgagtttttaaaaatttacatgaagatgacaattttgatattattgtaaaattttaaataaatttaggtgtaact 30159014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 336
Target Start/End: Original strand, 12320214 - 12320331
Alignment:
Q  218 aaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttg 317  Q
    ||||||| ||| |||||| | ||||||||||| || |||||| | |||||||||   ||| |||||||||||||||||||||| ||||||| |||||||     
T  12320214 aaaagggatgaaggttcaaagtgataatgaaaaaaagattttaa-aaatttacattgagaagacaattttgatattattgtaaaattttaagtaaattta 12320312  T
Q  318 ggtgtaactagaattatat 336  Q
     ||||||||||||||||||    
T  12320313 agtgtaactagaattatat 12320331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 20599616 - 20599720
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || ||| |    |||||| ||||||||| |||||| ||||||||  ||||||||||| ||||||||||||||||||||    
T  20599616 ggggtaagggttcagaatgatcataaaatataagtttttaaaaatttacatgaagagaacaattttagtattattgtaaaattttaaataaatttgggtg 20599715  T
Q  322 taact 326  Q
    |||||    
T  20599716 taact 20599720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 28068850 - 28068954
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| ||| |||| ||||||||||| |||||||||||||||  |||    
T  28068850 ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaagtttggtattattgtaaaattttaaataaatttatgtg 28068949  T
Q  322 taact 326  Q
    |||||    
T  28068950 taact 28068954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 3046861 - 3046763
Alignment:
Q  228 agggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || ||||| ||| |||||| ||||||||| ||||||| ||||||| |||||||||||| ||||||||||||||| | |||||||    
T  3046861 agggttcagaatgatcataaaaga-tgagtttttaaaaatttacatgaagagggcaattttaatattattgtaaaattttaaataaatttagatgtaact 3046763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 35719810 - 35719711
Alignment:
Q  228 agggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || |||||  |  |||||| ||||||||| ||||||| |||||||| ||||||| ||| |||||||||||||||||||||||||    
T  35719810 agggttcagaatgatcataaaagatggggtttttaaaaatttacatgaagagggcaattttggtattattataaaattttaaataaatttgggtgtaact 35719711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 316
Target Start/End: Original strand, 46234353 - 46234447
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaattt 316  Q
    ||||| ||||||||||||||| || ||||| ||| |||||| ||||||||| |||||||||||||||  ||||||||||| |||||||||||||||    
T  46234353 ggggtaagggttcagaatgatcataaaaga-tgagtttttaaaaatttacatgaagaggacaattttagtattattgtaaaattttaaataaattt 46234447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 3416410 - 3416304
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| |||||||| |||||| || |||||  | |||||| ||||||||| ||||||| | |||||| ||||||||||| ||||||||||||||||| |     
T  3416410 ggggtaagggttcataatgatcataaaagatgggtttttaaaaatttacatgaagagggcgattttggtattattgtaaaattttaaataaatttggata 3416311  T
Q  322 taactag 328  Q
    |||||||    
T  3416310 taactag 3416304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 3994870 - 3994994
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| || |||||||||||| || |||||  | |||||| |||||| || ||||| |||||||| | ||||||||||    
T  3994870 atggtgatttgtggatgaaag-ggggtaagtgttcagaatgatcataaaagatgggtttttaaaaattttcatgaagatgacaatttgg-tattattgta 3994967  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  3994968 aaattttaaataaatttgggtgtaact 3994994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 45502353 - 45502477
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||| ||    
T  45502353 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattata 45502451  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | | ||||| |||||||||||||||||    
T  45502452 a-aatttaattaaatttgggtgtaact 45502477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 43106594 - 43106659
Alignment:
Q  258 tttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgta 323  Q
    |||| ||||||||| |||||||||| ||||||||||||||||| |||||||||||||||| |||||    
T  43106594 tttaaaaatttacatgaagaggacacttttgatattattgtaaaattttaaataaatttgagtgta 43106659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 316
Target Start/End: Complemental strand, 49456937 - 49456849
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaattt 316  Q
    ||||||||||||||| || |||||   ||||||| ||||||||| |||||||| ||||||  ||||||||||| |||||||||||||||    
T  49456937 agggttcagaatgatcataaaagatgaatttttaaaaatttacatgaagaggataattttagtattattgtaaaattttaaataaattt 49456849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 24180587 - 24180686
Alignment:
Q  228 agggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || |||||  |  |||||| ||||||||| ||| ||| |||||||| ||||||| ||| |||||||||||||||||||||||||    
T  24180587 agggttcagaatgatcataaaagatggggtttttaaaaatttacatgaaaagggcaattttggtattattataaaattttaaataaatttgggtgtaact 24180686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 17136879 - 17136840
Alignment:
Q  320 tgtaactagaattatatggagtgagactagaaagagtcga 359  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  17136879 tgtaactaaaattatatggaatgagactagaaagagtcga 17136840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 328
Target Start/End: Complemental strand, 641488 - 641456
Alignment:
Q  296 tgtaagattttaaataaatttgggtgtaactag 328  Q
    ||||| |||||||||||||||||||||||||||    
T  641488 tgtaaaattttaaataaatttgggtgtaactag 641456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 76 - 355
Target Start/End: Original strand, 8935762 - 8936041
Alignment:
Q  76 atcatagggtcgataaatagaaactcgaagaaatttacgaaattcactcgtatgaatcgagtacttatcaatggaatagatgttgattcaattgatgatt 175  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  8935762 atcataggaccgataaatagaaactcgaagaaatttatgaaattcactcgtatgaatcgagtacttatcaatggaatagatattgattcaattgacgatt 8935861  T
Q  176 tttgtaggtattgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaa 275  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  8935862 tttgtaggtattgatttcatatccatggtggtttgtgggtgaaaaagggatgagggttcagaatgataatgaaagaatggtttttagaaatttacatgaa 8935961  T
Q  276 gaggacaattttgatattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaagag 355  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  8935962 gaggacaattttggtattattgtaaaattttaaataaatttgggtgtaactagaattatatgggatgagactagaaagag 8936041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 222 - 357
Target Start/End: Original strand, 8782705 - 8782840
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||||||  ||||||||||| ||||||||  | |||||||||||||||| ||| | |||||||||  ||||||||||| ||||||||||||||||||||    
T  8782705 ggggtgagaattcagaatgatcatgaaagatgggtttttagaaatttacatgaacaagacaattttagtattattgtaaaattttaaataaatttgggtg 8782804  T
Q  322 taactagaattatatggagtgagactagaaagagtc 357  Q
    |||||||||||||||||  ||||||||| |||||||    
T  8782805 taactagaattatatgggatgagactagcaagagtc 8782840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 217 - 356
Target Start/End: Original strand, 33570086 - 33570224
Alignment:
Q  217 aaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaattt 316  Q
    |||| ||||||||  ||||||||||| || ||||   | |||||||||||||||| ||| | |||||||||| ||||||||||| |||||||||||||||    
T  33570086 aaaagggggtgagaattcagaatgatcataaaaggtgggtttttagaaatttacatgaacatgacaattttggtattattgtaaaattttaaataaattt 33570185  T
Q  317 gggtgtaactagaattatatggagtgagactagaaagagt 356  Q
    ||||||||||||||| |||||| |||||||||| ||||||    
T  33570186 gggtgtaactagaatcatatgg-gtgagactagtaagagt 33570224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 8836552 - 8836656
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  8836552 ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttgatattattgtaaaattttaaataaatttaggtg 8836651  T
Q  322 taact 326  Q
    |||||    
T  8836652 taact 8836656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 3390832 - 3390957
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  3390832 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 3390930  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  3390931 aaattttaaataaatttgggtgtaact 3390957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 42675659 - 42675784
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||   ||||||| ||||||||| ||||||| |||||||||||||||||||    
T  42675659 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgaatttttaaaaatttacatgaagagggcaattttgatattattgta 42675757  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||| |||||||||    
T  42675758 aaattttaaataaatttaggtgtaact 42675784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 223 - 326
Target Start/End: Original strand, 10691933 - 10692036
Alignment:
Q  223 gggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgt 322  Q
    |||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||| |||||    
T  10691933 gggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttgatattattgtaaaattttaaataaatttaggtgt 10692032  T
Q  323 aact 326  Q
    ||||    
T  10692033 aact 10692036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 200 - 327
Target Start/End: Original strand, 36484601 - 36484727
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  |||||||| ||||||||| ||| |||||||||||| ||||||||||    
T  36484601 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaaaaggacaattttggtattattgta 36484699  T
Q  300 agattttaaataaatttgggtgtaacta 327  Q
    | | ||||||||||||| ||||||||||    
T  36484700 aaaatttaaataaatttaggtgtaacta 36484727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 25031566 - 25031425
Alignment:
Q  184 tattgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaa 283  Q
    ||||| ||||||||  | |||| ||||||| |||||  ||||| ||| ||||||||||| || |||||  | |||||| ||||||||| ||||||  |||    
T  25031566 tattggttgcatatctacggtgatttgtggatgaaag-ggggtaaggattcagaatgatcataaaagatgggtttttaaaaatttacatgaagagtgcaa 25031468  T
Q  284 ttttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  25031467 ttttgatattattgtaaaattttaaataaatttgggtgtaact 25031425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 200 - 328
Target Start/End: Complemental strand, 29296313 - 29296186
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgt 298  Q
    |||||| ||||||| ||||| |||| | || |||||||||||| || ||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  29296313 atggtgatttgtggatgaaagaggg-taagagttcagaatgatcataaaaga-tgagtttttaaaaatttacatgaagaggacaattttgatattattgt 29296216  T
Q  299 aagattttaaataaatttgggtgtaactag 328  Q
    || ||||||||||||||| | |||||||||    
T  29296215 aaaattttaaataaatttagatgtaactag 29296186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 15472688 - 15472792
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| |||||||||| |||| || |||||  | |||||| ||||||||| ||||| |||||||||| ||||||||||| ||||||||||||||||||||    
T  15472688 ggggtaagggttcagattgatcataaaagatgggtttttaaaaatttacatgaagaagacaattttggtattattgtaaaattttaaataaatttgggtg 15472787  T
Q  322 taact 326  Q
    |||||    
T  15472788 taact 15472792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 186 - 326
Target Start/End: Original strand, 23191870 - 23192009
Alignment:
Q  186 ttgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaatt 285  Q
    ||||||||| ||  |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||||||||||||| ||||||| |||||    
T  23191870 ttgattgcacatctatggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaatt 23191968  T
Q  286 ttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||  ||||||| ||| |||||||| ||||||||||||||||    
T  23191969 ttagtattattataaaattttaaacaaatttgggtgtaact 23192009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 200 - 328
Target Start/End: Complemental strand, 42221852 - 42221725
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||  |||||||| ||||||||||    
T  42221852 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagtgcaattttggtattattgta 42221754  T
Q  300 agattttaaataaatttgggtgtaactag 328  Q
    | |||||||||||||||| ||||||||||    
T  42221753 aaattttaaataaatttgagtgtaactag 42221725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 33591695 - 33591820
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||| ||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  33591695 atggtgatttgtggatgaaag-ggggtaaggattcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 33591793  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||| |||||||||    
T  33591794 aaattttaaataaatttaggtgtaact 33591820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 41743388 - 41743486
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    |||||||| |||||| || |||||   ||||||| ||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  41743388 agggttcaaaatgatcataaaagatgaatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttggatgtaact 41743486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 326
Target Start/End: Complemental strand, 18185870 - 18185763
Alignment:
Q  219 aaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgg 318  Q
    |||||||| || ||||| |||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||| |    
T  18185870 aaaggggtaagagttcaaaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttag 18185771  T
Q  319 gtgtaact 326  Q
    ||||||||    
T  18185770 gtgtaact 18185763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 326
Target Start/End: Original strand, 27771290 - 27771385
Alignment:
Q  231 gttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    |||||||||||| || |||||  | |||||||||||||||| ||||| |||||||||| ||||||||| | ||||||||||||||||| |||||||    
T  27771290 gttcagaatgatcataaaagatgggtttttagaaatttacatgaagatgacaattttggtattattgttaaattttaaataaatttggatgtaact 27771385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 8335418 - 8335320
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || |||||  | |||||| ||||||||| ||||||  |||||||||||||||||||| |||||||||||||||  ||||||||    
T  8335418 agggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagagcaattttgatattattgtaaaattttaaataaatttaagtgtaact 8335320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 28349133 - 28349035
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    |||||||||||| || || |||||  | |||||||||||||||| ||||| |||||||||| ||||||||| | ||||||||||||||| |||||||||    
T  28349133 agggttcagaatcatcataaaagatgggtttttagaaatttacatgaagatgacaattttggtattattgttaaattttaaataaatttaggtgtaact 28349035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 35066045 - 35066169
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || ||| |  | |||||| ||||||||| ||||||  |||||||| ||||||||||    
T  35066045 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaa-atgggtttttaaaaatttacatgaagagagcaattttggtattattgta 35066142  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  35066143 aaattttaaataaatttgggtgtaact 35066169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 1421074 - 1420968
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||| || |||||| ||| ||| |||||||| ||||||||||| |||||||||||||||||  |    
T  1421074 ggggtaagggttcagaatgatcataaaagatgggtttttaaaattttacatgaaaagggcaattttggtattattgtaaaattttaaataaatttggagg 1420975  T
Q  322 taactag 328  Q
    |||||||    
T  1420974 taactag 1420968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 6230323 - 6230225
Alignment:
Q  228 agggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || ||| | ||| |||||| ||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||  ||||||||    
T  6230323 agggttcagaatgatcataaaata-tgagtttttaaaaatttacatgaagagggcaattttaatattattgtaaaattttaaataaatttaagtgtaact 6230225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 356
Target Start/End: Original strand, 25472379 - 25472445
Alignment:
Q  290 tattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaagagt 356  Q
    ||||||| ||| |||||||||||||||||||||||||| || ||||||| |||||| ||||||||||    
T  25472379 tattattataaaattttaaataaatttgggtgtaactaaaactatatggggtgagattagaaagagt 25472445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 6e-87; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 86 - 357
Target Start/End: Complemental strand, 2559974 - 2559701
Alignment:
Q  86 cgataaatagaaactcgaagaaatttacgaaattca----ctcgtatgaatcgagtacttatcaatggaatagatgttgattcaattgatgatttttgta 181  Q
    ||||||||||||||||||||||||||| ||||||||    || ||||||||||||||| ||||||||||| ||||||||||||||||   ||||||  ||    
T  2559974 cgataaatagaaactcgaagaaatttatgaaattcatttacttgtatgaatcgagtacatatcaatggaagagatgttgattcaattagcgattttatta 2559875  T
Q  182 ggtattgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggac 281  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| ||| ||||||| |    
T  2559874 ggtattgattgcatatccatggtggtttgtgggtgaaaa-ggggtgagggttcaaaatgataatgaaagaa-gatttttagaaattgacatgaagagggc 2559777  T
Q  282 aattttgatattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaagagtc 357  Q
    ||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  2559776 aattttggtattattataaaattttaaataaattttggtgtaactagaattatatggggcgagactagaaagagtc 2559701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 88 - 350
Target Start/End: Original strand, 20554672 - 20554938
Alignment:
Q  88 ataaatagaaactcgaagaaatttacgaaattcactc----gtatgaatcgagtacttatcaatggaatagatgttgattcaattgatgatttttgtagg 183  Q
    ||||||||||||||||  ||||||| ||||||||||     ||||||||||||||| |||||||| || ||||||||||||||||| ||||||| |||||    
T  20554672 ataaatagaaactcgattaaatttatgaaattcacttacttgtatgaatcgagtacgtatcaatgaaagagatgttgattcaattggtgattttagtagg 20554771  T
Q  184 tattgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaa 283  Q
    |||||||||||||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||||   |||||||||||||||| |||||||  ||    
T  20554772 tattgattgcatatccatggtggtttgtgagtgaaaaaagggtgagcgttcagaatgataatgaaagaagagtttttagaaatttacatgaagagggtaa 20554871  T
Q  284 ttttgatattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactaga 350  Q
    ||||  ||||||||||   |||||||||||||| | ||||||||||||||||||| |||||||||||    
T  20554872 ttttagtattattgtacagttttaaataaatttagatgtaactagaattatatggggtgagactaga 20554938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 230 - 357
Target Start/End: Complemental strand, 11590344 - 11590217
Alignment:
Q  230 ggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaactaga 329  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||   ||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  11590344 ggttcagaatgataatgaaagaaggatttttagaaatttacatgaagagtgtaattttggtattattgtaaaattttaaataaatttgggtgtaactaga 11590245  T
Q  330 attatatggagtgagactagaaagagtc 357  Q
    |||||||||  |||||||||||| ||||    
T  11590244 attatatgggatgagactagaaatagtc 11590217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 222 - 353
Target Start/End: Complemental strand, 9576135 - 9576004
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||| || |||  |||||||  ||||||||||| |||||||||||||||| |||    
T  9576135 ggggtgagggttcagaatgataatgaaagaagggtttttagaaatttacatgatgagagcaattttagtattattgtaaaattttaaataaatttgtgtg 9576036  T
Q  322 taactagaattatatggagtgagactagaaag 353  Q
    ||||||||||||||||| |||| |||||||||    
T  9576035 taactagaattatatggggtgaaactagaaag 9576004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 222 - 357
Target Start/End: Complemental strand, 9224703 - 9224566
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaattt--ggg 319  Q
    |||||||||||||| |||||||||||||||| | |||| | ||||||||| ||||||||||||||||||||| |||||| |||||||||||||||   |     
T  9224703 ggggtgagggttcaaaatgataatgaaagaagggttttaaaaaatttacatgaagaggacaattttgatattgttgtaaaattttaaataaattttcaga 9224604  T
Q  320 tgtaactagaattatatggagtgagactagaaagagtc 357  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  9224603 tgtaactagaattatatggggtgagactagaaagagtc 9224566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 218 - 357
Target Start/End: Original strand, 12713108 - 12713247
Alignment:
Q  218 aaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttg 317  Q
    |||||||| |||||||||||||||| || |||||  |  ||||||||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||||    
T  12713108 aaaaggggcgagggttcagaatgatcataaaagatggggttttagaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttg 12713207  T
Q  318 ggtgtaactagaattatatggagtgagactagaaagagtc 357  Q
    | ||||||||||||||||||  |||||||||| |||||||    
T  12713208 gatgtaactagaattatatgaggtgagactagcaagagtc 12713247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 8062916 - 8062791
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||| ||||| ||||||||||||||| || |||||  | |||||||||| ||||| |||||||||||||||| ||||||| ||    
T  8062916 atggtgatttgtggatgaaaa-ggggtaagggttcagaatgatcataaaagatgggtttttagaaaattacatgaagaggacaattttggtattattata 8062818  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  8062817 aaattttaaataaatttgggtgtaact 8062791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 228 - 328
Target Start/End: Original strand, 32938433 - 32938533
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaacta 327  Q
    ||||||||||||||| || |||||  | |||||||||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  32938433 agggttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttgggtgtaacta 32938532  T
Q  328 g 328  Q
    |    
T  32938533 g 32938533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 4169791 - 4169666
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  4169791 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 4169693  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  4169692 aaattttaaataaatttgggtgtaact 4169666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 4210520 - 4210395
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  4210520 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 4210422  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  4210421 aaattttaaataaatttgggtgtaact 4210395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 5545477 - 5545371
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  5545477 ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttgggtg 5545378  T
Q  322 taactag 328  Q
    |||||||    
T  5545377 taactag 5545371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 222 - 332
Target Start/End: Original strand, 8313783 - 8313893
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||||||||||| |||||||||||||| || | |||||| ||||||||| ||||||||||||| |||||||||||||| |||||| ||||||| | |||    
T  8313783 ggggtgagggttcggaatgataatgaaataaaggtttttacaaatttacatgaagaggacaattatgatattattgtaaaattttatataaattcgagtg 8313882  T
Q  322 taactagaatt 332  Q
    |||||| ||||    
T  8313883 taactataatt 8313893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 17595869 - 17595994
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  17595869 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 17595967  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  17595968 aaattttaaataaatttgggtgtaact 17595994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 324
Target Start/End: Original strand, 33131138 - 33131261
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  |||||||| ||||||||| |||||||||||||||  ||||||||||    
T  33131138 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttagtattattgta 33131236  T
Q  300 agattttaaataaatttgggtgtaa 324  Q
    | | |||||||||||||||||||||    
T  33131237 aaaatttaaataaatttgggtgtaa 33131261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 200 - 327
Target Start/End: Original strand, 8933810 - 8933936
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||| ||| || |||||  | |||||| ||||||||| |||||||||||||||| |||||| |||    
T  8933810 atggtgatttgtggatgaaag-ggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattatagta 8933908  T
Q  300 agattttaaataaatttgggtgtaacta 327  Q
    | ||||||||||||||||||||||||||    
T  8933909 aaattttaaataaatttgggtgtaacta 8933936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 33489919 - 33489794
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgt 298  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || ||||| ||| |||||| ||||||||| ||||||| |||||||| |||||||||    
T  33489919 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaaga-tgagtttttaaaaatttacatgaagagggcaattttggtattattgt 33489822  T
Q  299 aagattttaaataaatttgggtgtaact 326  Q
    || |||||||||||||||||||||||||    
T  33489821 aaaattttaaataaatttgggtgtaact 33489794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 200 - 325
Target Start/End: Original strand, 742856 - 742980
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  |||||||| ||||||||| ||||||  |||||||| ||||||||||    
T  742856 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacacgaagagagcaattttggtattattgta 742954  T
Q  300 agattttaaataaatttgggtgtaac 325  Q
    | |||||||||||||||| |||||||    
T  742955 aaattttaaataaatttgagtgtaac 742980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 28914151 - 28914255
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || ||||| || |||||| ||||||||| ||||||   ||||||||||||||||||| ||||||||||||||| ||||    
T  28914151 ggggtaagggttcagaatgatcataaaagattggtttttaaaaatttacatgaagagagtaattttgatattattgtaaaattttaaataaatttaggtg 28914250  T
Q  322 taact 326  Q
    |||||    
T  28914251 taact 28914255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 8659117 - 8658989
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgat---aatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattatt 296  Q
    |||||| ||||||| |||||  ||||| |||||||| ||||||   ||| |||||  | |||||| ||||||||| |||||||||||||||| |||||||    
T  8659117 atggtgatttgtggatgaaag-ggggtaagggttcaaaatgatcataattaaagatgggtttttaaaaatttacatgaagaggacaattttggtattatt 8659019  T
Q  297 gtaagattttaaataaatttgggtgtaact 326  Q
    |||| |||||||||||||||||||||||||    
T  8659018 gtaaaattttaaataaatttgggtgtaact 8658989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 10790591 - 10790493
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || |||||   ||||||| ||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||| |||||||||    
T  10790591 agggttcagaatgatcataaaagatgaatttttaaaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaattttggtgtaact 10790493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 219 - 326
Target Start/End: Original strand, 18676725 - 18676833
Alignment:
Q  219 aaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgt-aagattttaaataaatttg 317  Q
    |||||||| ||||||||||||||| || |||||   ||||||| ||||||||| |||||||||||||||| ||||||| | || |||||||||||||||     
T  18676725 aaaggggtaagggttcagaatgatcataaaagatgaatttttaaaaatttacatgaagaggacaattttggtattattataaaaattttaaataaattta 18676824  T
Q  318 ggtgtaact 326  Q
    |||||||||    
T  18676825 ggtgtaact 18676833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 29516738 - 29516667
Alignment:
Q  255 atttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||| | |||||||    
T  29516738 atttttagaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttagatgtaact 29516667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 34475249 - 34475145
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggt 320  Q
    ||||| ||||||||||||||| || ||||| ||| |||||| ||||||||| ||||||| |||||||| ||||||||||| ||| ||||||||||| | |    
T  34475249 ggggtaagggttcagaatgatcataaaaga-tgagtttttaaaaatttacatgaagagggcaattttggtattattgtaaaattgtaaataaatttagat 34475151  T
Q  321 gtaact 326  Q
    ||||||    
T  34475150 gtaact 34475145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 173 - 352
Target Start/End: Original strand, 8978117 - 8978291
Alignment:
Q  173 atttttgtaggtattgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaa 272  Q
    ||||| |||||||||| |||||  | |||| ||||||||||||| ||||||||||| |||||| | ||||||||||| || | |||  | |||||||||     
T  8978117 attttggtaggtattggttgcacttccatgatggtttgtgggtg-aaaaggggtgaaggttcaaagtgataatgaaaaaaaggtttaga-aaatttacac 8978214  T
Q  273 gaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaa 352  Q
      ||||   ||||  ||||||||||||| ||||||| |||||||   ||||||||||||| |||||  ||||||||||||    
T  8978215 agagag---aattacgatattattgtaaaattttaagtaaatttaaatgtaactagaattgtatggcatgagactagaaa 8978291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 334
Target Start/End: Original strand, 25144160 - 25144213
Alignment:
Q  281 caattttgatattattgtaagattttaaataaatttgggtgtaactagaattat 334  Q
    |||||||| ||||||||||| ||||||| |||||||| ||||||||||||||||    
T  25144160 caattttggtattattgtaaaattttaagtaaatttgagtgtaactagaattat 25144213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 352
Target Start/End: Complemental strand, 24418733 - 24418674
Alignment:
Q  293 tattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaa 352  Q
    |||| ||| |||||||||||||| |||||||||||||| ||||| | ||| |||||||||    
T  24418733 tattctaaaattttaaataaattggggtgtaactagaaatatatagggtgcgactagaaa 24418674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 13889147 - 13889191
Alignment:
Q  279 gacaattttgatattattgtaagattttaaataaatttgggtgta 323  Q
    |||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  13889147 gacaattttggtattattgtaaaattttaagtaaatttaggtgta 13889191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 9e-49; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 5219217 - 5218943
Alignment:
Q  90 aaatagaaactcgaagaaatttacgaaattcactc----gtatgaatcgagtacttatcaatggaatagatgttgattcaattgatgatttttgtaggta 185  Q
    ||||||||||||||| ||||||| ||||||||||     ||||||||||||||| ||||||||||| |||||||||||||||||       | |||| ||    
T  5219217 aaatagaaactcgaataaatttatgaaattcacttacttgtatgaatcgagtacgtatcaatggaagagatgttgattcaattggca----tagtagata 5219122  T
Q  186 ttgattgcatattcatggtggtttgtgggtgaaaaaggggtgaggg-------ttcagaatgataatgaaagaatgatttttagaaatttacaagaagag 278  Q
    |||||||||||| ||||||||||||||||| ||| ||| ||||||        |||||||||||||||| ||||   | |||||||||||| | | || |    
T  5219121 ttgattgcatatccatggtggtttgtgggtaaaagaggagtgaggaatcagatttcagaatgataatgagagaagtgtctttagaaatttagatggaggg 5219022  T
Q  279 gacaattttgatattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaagagtc 357  Q
    | |||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  5219021 ggcaattttggtattattgtaaaattttaaataaatttgggtgtaactggaattatatgggatgagactagaaagagtc 5218943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 222 - 357
Target Start/End: Original strand, 35513084 - 35513219
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||||| ||||||||||||||||||||||| | |||||| |||| |||| ||||||| |||||||||||||||||||| ||||||||||||||| | ||    
T  35513084 ggggtgaaggttcagaatgataatgaaagaagggtttttaaaaatctacatgaagagggcaattttgatattattgtaaaattttaaataaatttagatg 35513183  T
Q  322 taactagaattatatggagtgagactagaaagagtc 357  Q
    ||||||||||||||||   |||||||||||||||||    
T  35513184 taactagaattatatgagatgagactagaaagagtc 35513219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 20607694 - 20607819
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| |||||||||||||||||||||||||||    
T  20607694 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttgatattattgta 20607792  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  20607793 aaattttaaataaatttgggtgtaact 20607819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 222 - 328
Target Start/End: Original strand, 26717991 - 26718097
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  |||||||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  26717991 ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagagggcaattttgatattattgtaaaattttaaataaatttgggtg 26718090  T
Q  322 taactag 328  Q
    |||||||    
T  26718091 taactag 26718097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 229 - 337
Target Start/End: Complemental strand, 501837 - 501729
Alignment:
Q  229 gggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaacta 327  Q
    |||||||||||||| || ||||| ||| |||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  501837 gggttcagaatgatcataaaaga-tgagtttttagaaatttacatgaagagaacaattttgatattattgtaaaattttaaataaatttggatgtaacta 501739  T
Q  328 gaattatatg 337  Q
    ||||||||||    
T  501738 gaattatatg 501729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 200 - 328
Target Start/End: Complemental strand, 22497366 - 22497239
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  22497366 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgta 22497268  T
Q  300 agattttaaataaatttgggtgtaactag 328  Q
    | | |||||||||||||||||||||||||    
T  22497267 aaaatttaaataaatttgggtgtaactag 22497239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 1546187 - 1546312
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||||||||||||||    
T  1546187 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttgatattattgta 1546285  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  1546286 aaattttaaataaatttgggtgtaact 1546312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 43218861 - 43218755
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  |||||||| ||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  43218861 ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaaatttaaataaatttgggtg 43218762  T
Q  322 taactag 328  Q
    |||||||    
T  43218761 taactag 43218755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 228 - 328
Target Start/End: Original strand, 17338509 - 17338609
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaacta 327  Q
    ||||||||||||||| || |||||  |||||||| ||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  17338509 agggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaaatttaaataaatttgggtgtaacta 17338608  T
Q  328 g 328  Q
    |    
T  17338609 g 17338609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 222 - 357
Target Start/End: Complemental strand, 41454351 - 41454216
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||||| ||||||||||||| || |||||  | ||||||| |||||||| ||| | |||||||||| ||||||||||| ||||||||||||||| ||||    
T  41454351 ggggtgaaggttcagaatgatcataaaagatgggtttttagtaatttacatgaaaaagacaattttggtattattgtaaaattttaaataaatttaggtg 41454252  T
Q  322 taactagaattatatggagtgagactagaaagagtc 357  Q
    |||||||| |||||| |  ||||||||| |||||||    
T  41454251 taactagacttatataggatgagactagcaagagtc 41454216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 50744258 - 50744353
Alignment:
Q  125 gtatgaatcgagtacttatcaatggaatagatgttgattcaattgatgatttttgtaggtattgattgcatattcatggtggtttgtgggtgaaaa 220  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||  |||||| ||||||||||||||||||| || |||||||| ||||||||||    
T  50744258 gtatgaatcgagtacgtatcaatggaagagatgttgattcaattggcgattttagtaggtattgattgcatatccacggtggtttctgggtgaaaa 50744353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 10471357 - 10471482
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| | ||||||||||||| || |||||  | |||||| ||||||||| |||||||||||||||| ||||||||||    
T  10471357 atggtgatttgtggatgaaag-ggggtaaaggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgta 10471455  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  10471456 aaattttaaataaatttgggtgtaact 10471482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 30357377 - 30357252
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| |||||||| |||||| || |||||  |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  30357377 atggtgatttgtggatgaaag-ggggtaagggttcaaaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgta 30357279  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||| |||||||||    
T  30357278 aaattttaaataaatttaggtgtaact 30357252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 35846873 - 35846748
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  35846873 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 35846775  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  35846774 aaattttaaataaatttgggtgtaact 35846748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 37126634 - 37126759
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  37126634 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 37126732  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  37126733 aaattttaaataaatttgggtgtaact 37126759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 43973234 - 43973359
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| |||||||||||||||| ||||||||||    
T  43973234 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgta 43973332  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||||||| |||||    
T  43973333 aaattttaaataaatttgggtataact 43973359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 51754549 - 51754424
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  51754549 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 51754451  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  51754450 aaattttaaataaatttgggtgtaact 51754424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 53019086 - 53018980
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||| ||| || |||||  | |||||| | ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  53019086 ggggtaagggttcagaacgatcataaaagatgggtttttaaacatttacatgaagaggacaattttgatattattgtaaaattttaaataaatttgggtg 53018987  T
Q  322 taactag 328  Q
    |||||||    
T  53018986 taactag 53018980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 229 - 326
Target Start/End: Complemental strand, 37821160 - 37821063
Alignment:
Q  229 gggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    |||||||||||||| || |||||  |||||||| ||||||||| |||||||||||||||| ||||||| ||| |||||||||||||||||||||||||    
T  37821160 gggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattataaaattttaaataaatttgggtgtaact 37821063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 46528195 - 46528091
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||| ||||||||| |||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  46528195 ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttaggtg 46528096  T
Q  322 taact 326  Q
    |||||    
T  46528095 taact 46528091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 328
Target Start/End: Complemental strand, 48458512 - 48458385
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||| ||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  48458512 atggtgatttgtggatgaaag-ggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 48458414  T
Q  300 agattttaaataaatttgggtgtaactag 328  Q
    | |||||||||||||||||||||||||||    
T  48458413 aaattttaaataaatttgggtgtaactag 48458385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 219 - 326
Target Start/End: Original strand, 28555188 - 28555295
Alignment:
Q  219 aaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgg 318  Q
    |||| ||| ||||||||||||||| || |||||    |||||||||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||||    
T  28555188 aaagaggtaagggttcagaatgatcataaaagataagtttttagaaatttacatgaagaagacaattttggtattattgtaaaattttaaataaatttgg 28555287  T
Q  319 gtgtaact 326  Q
    ||||||||    
T  28555288 gtgtaact 28555295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 315
Target Start/End: Original strand, 41114091 - 41114221
Alignment:
Q  184 tattgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaa 283  Q
    ||||||||||| ||  |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||   ||||||| ||||||||| |||||||| ||    
T  41114091 tattgattgcacatctatggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagataaatttttaaaaatttacatgaagaggataa 41114189  T
Q  284 ttttgatattattgtaagattttaaataaatt 315  Q
    ||||||||||||||||| ||||||||||||||    
T  41114190 ttttgatattattgtaaaattttaaataaatt 41114221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 24348929 - 24348804
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||| | |||||||| ||||||||||    
T  24348929 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagatggcaattttggtattattgta 24348831  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  24348830 aaattttaaataaatttgggtgtaact 24348804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 222 - 324
Target Start/End: Complemental strand, 24405876 - 24405774
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||| ||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||    
T  24405876 ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttggatg 24405777  T
Q  322 taa 324  Q
    |||    
T  24405776 taa 24405774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 31655144 - 31655046
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || |||||  | |||||||||||||||| ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  31655144 agggttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtattattgttaaattttaaataaatttgggtgtaact 31655046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 44377908 - 44377783
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  |||||||| ||||||||| ||||||  |||||||| ||||||||||    
T  44377908 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagagagcaattttggtattattgta 44377810  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||| |||||||||    
T  44377809 aaattttaaataaatttaggtgtaact 44377783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 51167180 - 51167305
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| |||||||| |||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  51167180 atggtgatttgtggatgaaag-ggggtaagggttcataatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 51167278  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  51167279 aaattttaaataaatttgggtgtaact 51167305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 10049118 - 10049243
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgt 298  Q
    |||||| ||||||| ||||| |||| | |||||||| |||||| || ||||| ||| |||||| ||||||||| ||||||| |||||||| |||||||||    
T  10049118 atggtgatttgtggatgaaagaggg-taagggttcataatgatcataaaaga-tgagtttttaaaaatttacatgaagagggcaattttggtattattgt 10049215  T
Q  299 aagattttaaataaatttgggtgtaact 326  Q
    || |||||||||||||||||||||||||    
T  10049216 aaaattttaaataaatttgggtgtaact 10049243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 8828619 - 8828744
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| || |||||||||||| || |||||  | |||||| ||||||||| || ||||||||||||| ||||||||||    
T  8828619 atggtgatttgtggatgaaag-ggggtaagagttcagaatgatcataaaagatgggtttttaaaaatttacatgacgaggacaattttggtattattgta 8828717  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||||| |||||||    
T  8828718 aaattttaaataaatttggatgtaact 8828744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 10659652 - 10659527
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| |||||||||||||||  | || ||  |||||||| ||||||||| ||||||| |||||||| ||||||||||    
T  10659652 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcgtaaacgatggatttttaaaaatttacatgaagagggcaattttggtattattgta 10659554  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||||||| |||||    
T  10659553 aaattttaaataaatttgggtttaact 10659527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 13287056 - 13286931
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| |||||||| ||| || || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  13287056 atggtgatttgtggatgaaag-ggggtaagggttcaaaattatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 13286958  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  13286957 aaattttaaataaatttgggtgtaact 13286931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 5273604 - 5273708
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggt 320  Q
    ||||| ||||||||||||||| || ||||| ||| |||||| ||||||||| ||||||| |||||| | ||||||||||| |||||||||||||||||||    
T  5273604 ggggtaagggttcagaatgatcataaaaga-tgagtttttaaaaatttacatgaagagggcaatttcggtattattgtaaaattttaaataaatttgggt 5273702  T
Q  321 gtaact 326  Q
    ||||||    
T  5273703 gtaact 5273708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 2446066 - 2445962
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || ||| |  | |||||| ||||| ||| ||||||| |||||||||||||||||||| ||||||||||||||| ||||    
T  2446066 ggggtaagggttcagaatgatcataaaatatgggtttttaaaaattcacatgaagagggcaattttgatattattgtaaaattttaaataaatttaggtg 2445967  T
Q  322 taact 326  Q
    |||||    
T  2445966 taact 2445962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 38252624 - 38252520
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||| | ||    
T  38252624 ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttagatg 38252525  T
Q  322 taact 326  Q
    |||||    
T  38252524 taact 38252520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 47697873 - 47697769
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| |||||||||| |||| || |||||  | |||||| ||||||||| ||||||  |||||||| ||||||||||| ||||||||||||||||||||    
T  47697873 ggggtaagggttcagattgatcataaaagatgggtttttaaaaatttacatgaagagagcaattttggtattattgtaaaattttaaataaatttgggtg 47697774  T
Q  322 taact 326  Q
    |||||    
T  47697773 taact 47697769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 8068525 - 8068650
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgattttta-gaaatttacaagaagaggacaattttgatattattgt 298  Q
    |||||| ||||||| |||||| ||||| |||||||||||| || || ||| | ||| ||||| |||||||||| ||||||| |||| ||| |||||||||    
T  8068525 atggtgatttgtggatgaaaa-ggggtaagggttcagaataatcataaaata-tgagttttaagaaatttacatgaagagggcaatcttggtattattgt 8068622  T
Q  299 aagattttaaataaatttgggtgtaact 326  Q
    || |||||||||||||||||||||||||    
T  8068623 aaaattttaaataaatttgggtgtaact 8068650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 323
Target Start/End: Original strand, 49804864 - 49804986
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||| ||| || |||||  | |||||| ||||||||| |||||||||||||||  ||||||||||    
T  49804864 atggtgatttgtggatgaaag-ggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttagtattattgta 49804962  T
Q  300 agattttaaataaatttgggtgta 323  Q
    | ||||||||||||||||| ||||    
T  49804963 aaattttaaataaatttggatgta 49804986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 55274150 - 55274275
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgt 298  Q
    |||||| ||||||| |||||  ||||| || ||||| |||||| || ||||| ||| |||||| ||||||||| ||||||| ||||||||||||||||||    
T  55274150 atggtgatttgtggatgaaag-ggggtaagagttcataatgatcataaaaga-tgagtttttaaaaatttacatgaagagggcaattttgatattattgt 55274247  T
Q  299 aagattttaaataaatttgggtgtaact 326  Q
    || ||||||||||||||||| |||||||    
T  55274248 aaaattttaaataaatttggatgtaact 55274275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 326
Target Start/End: Complemental strand, 26229443 - 26229373
Alignment:
Q  256 tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    |||||| | ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  26229443 tttttaaacatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 26229373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 998342 - 998446
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || ||| |  | |||||||||||||||| ||||| | |||||||  ||||||||||| ||||||||||||||||| ||    
T  998342 ggggtaagggttcagaatgatcataaaacatgggtttttagaaatttacatgaagatggcaattttagtattattgtaaaattttaaataaatttggatg 998441  T
Q  322 taact 326  Q
    |||||    
T  998442 taact 998446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 219 - 326
Target Start/End: Complemental strand, 3019310 - 3019203
Alignment:
Q  219 aaaggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttg 317  Q
    |||||| | ||||||||||||||| || ||||| ||| |||||| ||||||||| ||||| ||||||||| |||||||||||| |||||||||||||||     
T  3019310 aaagggataagggttcagaatgattataaaaga-tgagtttttaaaaatttacatgaagatgacaattttaatattattgtaaaattttaaataaattta 3019212  T
Q  318 ggtgtaact 326  Q
    | |||||||    
T  3019211 gatgtaact 3019203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 228 - 324
Target Start/End: Complemental strand, 23150838 - 23150742
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaa 324  Q
    |||||| |||||||| || |||||  |||||||| ||||||||| ||||||| |||||||| ||||||| ||| ||||||||||||| |||||||||    
T  23150838 agggtttagaatgatcataaaagatggatttttaaaaatttacatgaagagggcaattttggtattattataaaattttaaataaatatgggtgtaa 23150742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 326
Target Start/End: Original strand, 12227760 - 12227879
Alignment:
Q  207 tttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagatttt 306  Q
    ||||||| |||||  ||||| |||||||||||| || || |||||  | |||||| ||||||||  ||||||| |||||||| ||||||||||| |||||    
T  12227760 tttgtggatgaaaggggggtaagggttcagaataatcataaaagatgggtttttaaaaatttacgtgaagagggcaattttggtattattgtaaaatttt 12227859  T
Q  307 aaataaatttgggtgtaact 326  Q
    ||||||||||  ||||||||    
T  12227860 aaataaatttaagtgtaact 12227879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 357
Target Start/End: Original strand, 9126357 - 9126450
Alignment:
Q  263 aaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaagagtc 357  Q
    ||||||||| |||||||  ||||| | ||||||||||| ||||||| ||||||| ||||||||||||||||||||  ||||||||||||| ||||    
T  9126357 aaatttacatgaagaggt-aatttcggtattattgtaaaattttaagtaaatttaggtgtaactagaattatatgatgtgagactagaaaaagtc 9126450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 357
Target Start/End: Original strand, 9134464 - 9134557
Alignment:
Q  263 aaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaagagtc 357  Q
    ||||||||| |||||||  ||||| | ||||||||||| ||||||| ||||||| ||||||||||||||||||||  ||||||||||||| ||||    
T  9134464 aaatttacatgaagaggt-aatttcggtattattgtaaaattttaagtaaatttaggtgtaactagaattatatgatgtgagactagaaaaagtc 9134557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 9746069 - 9745945
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| | |||| ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||  ||||||||||    
T  9746069 atggtgatttgtggat-aaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttagtattattgta 9745971  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | | |||||||||||| ||||||||||    
T  9745970 a-aatttaaataaattcgggtgtaact 9745945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 27449590 - 27449492
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || |||||  | |||||| ||||||||| |||||||  ||||||| ||||||||||| ||||||||||||||| | |||||||    
T  27449590 agggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggaaattttggtattattgtaaaattttaaataaatttagatgtaact 27449492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 9116497 - 9116559
Alignment:
Q  290 tattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaa 352  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||||||  |||||||||||||    
T  9116497 tattattgtaaaattttaagtaaatttgggtgtaattagaattatatgatgtgagactagaaa 9116559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 26975548 - 26975594
Alignment:
Q  280 acaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    |||||||||||||||| |||| ||||||||||||||| |||||||||    
T  26975548 acaattttgatattatagtaaaattttaaataaatttaggtgtaact 26975594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 348
Target Start/End: Original strand, 50744389 - 50744476
Alignment:
Q  261 agaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagacta 348  Q
    |||| |||||| | ||||| || ||| ||||||||||||| |||||  | ||| |||||||||||||||| ||||||| |||| ||||    
T  50744389 agaagtttacatggagagggcattttcgatattattgtaaaattttttaaaaaattgggtgtaactagaactatatggggtgacacta 50744476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 293
Target Start/End: Complemental strand, 33591194 - 33591124
Alignment:
Q  223 gggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatatt 293  Q
    |||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||    
T  33591194 gggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtatt 33591124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 355
Target Start/End: Original strand, 7027128 - 7027177
Alignment:
Q  306 taaataaatttgggtgtaactagaattatatggagtgagactagaaagag 355  Q
    |||||||||||| |||||||||||||| |||||  |||| ||||||||||    
T  7027128 taaataaatttgtgtgtaactagaattgtatgggatgaggctagaaagag 7027177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 179 - 352
Target Start/End: Original strand, 41476622 - 41476794
Alignment:
Q  179 gtaggtattgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagag 278  Q
    |||||||||| ||||| ||||||||||||||||||||||||| || |||| |||||| | ||||||||||| || | |||| |||||||||||   ||||    
T  41476622 gtaggtattggttgcacattcatggtggtttgtgggtgaaaa-ggagtgaaggttcaaagtgataatgaaaaaaaggttttaagaaatttacatagagag 41476720  T
Q  279 gacaattttgatattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaa 352  Q
    ||||||||||  ||  |||||| ||||||| |||||||||||| || |||||||||||||||||||||||||||    
T  41476721 gacaattttggcatcgttgtaaaattttaagtaaatttgggtgcaattagaattatatggagtgagactagaaa 41476794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 200 - 328
Target Start/End: Original strand, 49332093 - 49332220
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  49332093 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgta 49332191  T
Q  300 agattttaaataaatttgggtgtaactag 328  Q
    | | |||||||||||||||||||||||||    
T  49332192 aaaatttaaataaatttgggtgtaactag 49332220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 200 - 328
Target Start/End: Complemental strand, 54202457 - 54202330
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| |||||||||||||||| ||||||||||    
T  54202457 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgta 54202359  T
Q  300 agattttaaataaatttgggtgtaactag 328  Q
    | |||||||||||||||||||||||||||    
T  54202358 aaattttaaataaatttgggtgtaactag 54202330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 17445621 - 17445746
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||||||||||||| |||||||| ||||||| ||||||||||    
T  17445621 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagaggataattttggtattattgta 17445719  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  17445720 aaattttaaataaatttgggtgtaact 17445746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 200 - 357
Target Start/End: Complemental strand, 11308893 - 11308738
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||||||  ||||||||||| || |||||  | |||||||||||||||| ||| ||| |||||||| ||| ||||||    
T  11308893 atggtgatttgtggatgaaag-ggggtgagaattcagaatgatcataaaagatgggtttttagaaatttacatgaacagggcaattttggtataattgta 11308795  T
Q  300 agattttaaataaatttgggtgtaactagaattatatggagtgagactagaaagagtc 357  Q
    | |||||||||||||||| |||||||||||||||||||| ||||||| || |||||||    
T  11308794 aaattttaaataaatttgagtgtaactagaattatatgg-gtgagaccagcaagagtc 11308738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 200 - 328
Target Start/End: Complemental strand, 2491958 - 2491831
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| ||||||||||||||||||     
T  2491958 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttgatattattgtt 2491860  T
Q  300 agattttaaataaatttgggtgtaactag 328  Q
    | |||||||||||||||||||||||||||    
T  2491859 aaattttaaataaatttgggtgtaactag 2491831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 45884685 - 45884570
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  |||||||| ||||||||| |||||||||||||||||||||||||||    
T  45884685 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttgatattattgta 45884587  T
Q  300 agattttaaataaattt 316  Q
    | |||||||||||||||    
T  45884586 aaattttaaataaattt 45884570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 200 - 324
Target Start/End: Complemental strand, 50621789 - 50621666
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| |||||||||||||||| ||||||||||    
T  50621789 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgta 50621691  T
Q  300 agattttaaataaatttgggtgtaa 324  Q
    | |||||||||||||||||||||||    
T  50621690 aaattttaaataaatttgggtgtaa 50621666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 222 - 325
Target Start/End: Original strand, 35949484 - 35949587
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  |||||||| |||||||||  ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  35949484 ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacataaagaggacaattttggtattattgtaaaattttaaataaatttgggtg 35949583  T
Q  322 taac 325  Q
    ||||    
T  35949584 taac 35949587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 328
Target Start/End: Original strand, 27767614 - 27767723
Alignment:
Q  219 aaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgg 318  Q
    |||||||| ||||||||||| ||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||| |||||||||||||||||    
T  27767614 aaaggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttgg 27767713  T
Q  319 gtgtaactag 328  Q
    ||||||||||    
T  27767714 gtgtaactag 27767723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 328
Target Start/End: Original strand, 11005613 - 11005740
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| |||||||||     
T  11005613 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtt 11005711  T
Q  300 agattttaaataaatttgggtgtaactag 328  Q
    | |||||||||||||||||||||||||||    
T  11005712 aaattttaaataaatttgggtgtaactag 11005740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 324
Target Start/End: Original strand, 36308964 - 36309087
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||| || || ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  36308964 atggtgatttgtggatgaaaa-ggagtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 36309062  T
Q  300 agattttaaataaatttgggtgtaa 324  Q
    | |||||||||||||||||||||||    
T  36309063 aaattttaaataaatttgggtgtaa 36309087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 328
Target Start/End: Complemental strand, 56162600 - 56162473
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||| ||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  56162600 atggtgatttgtggatgaaag-ggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 56162502  T
Q  300 agattttaaataaatttgggtgtaactag 328  Q
    | |||||||||||||||||||||||||||    
T  56162501 aaattttaaataaatttgggtgtaactag 56162473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 3875653 - 3875751
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || ||| |  | |||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  3875653 agggttcagaatgatcataaaatatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 3875751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 22169209 - 22169111
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || |||||  |||||||| ||||||||| ||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||    
T  22169209 agggttcagaatgatcataaaagatggatttttaaaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaattcgggtgtaact 22169111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 24744951 - 24745076
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  |||||||| ||||||| | ||||||| |||||||| ||||||||||    
T  24744951 atggtgatttgtggatgaaag-ggggtaagggttcagaatgattataaaagatggatttttaaaaatttatatgaagagggcaattttggtattattgta 24745049  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||| |||||||||||||||||||||    
T  24745050 aaattgtaaataaatttgggtgtaact 24745076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 201 - 326
Target Start/End: Original strand, 3874532 - 3874656
Alignment:
Q  201 tggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaa 300  Q
    ||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||||||||||||| |||||||||||||||| |||||| |||     
T  3874532 tggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagaggacaattttggtattatagtac 3874630  T
Q  301 gattttaaataaatttgggtgtaact 326  Q
     ||||||||||||||||| |||||||    
T  3874631 aattttaaataaatttggatgtaact 3874656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 3931949 - 3932075
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatga--tttttagaaatttacaagaagaggacaattttgatattattg 297  Q
    |||||| ||||||| | |||| ||||| ||||||||||||||| || ||||| |||  |||||||||||||||| ||||||| |||||||| ||||||||    
T  3931949 atggtgatttgtggat-aaaagggggtaagggttcagaatgatcataaaaga-tgaggtttttagaaatttacatgaagagggcaattttggtattattg 3932046  T
Q  298 taagattttaaataaatttgggtgtaact 326  Q
    ||| ||||||||||||||| |||||||||    
T  3932047 taaaattttaaataaattttggtgtaact 3932075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 219 - 357
Target Start/End: Original strand, 11381898 - 11382037
Alignment:
Q  219 aaaggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttg 317  Q
    |||||||||||  || |||||||| || ||||| ||| |||||||||||||||  ||| ||  |||||||||||||||||||| ||||||||||||||||    
T  11381898 aaaggggtgagaatttagaatgatcataaaaga-tgagtttttagaaatttacttgaacagagcaattttgatattattgtaaaattttaaataaatttg 11381996  T
Q  318 ggtgtaactagaattatatggagtgagactag-aaagagtc 357  Q
    | | ||||||||||||||| | |||||||||| ||||||||    
T  11381997 gatataactagaattatatagggtgagactagcaaagagtc 11382037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 231 - 326
Target Start/End: Original strand, 36225124 - 36225219
Alignment:
Q  231 gttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    |||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  36225124 gttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttgatattattgtaaaattttaaataaatttggatgtaact 36225219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 26488456 - 26488351
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||| |||| |||||||||||||||    
T  26488456 ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaa-atttgaaataaatttgggtg 26488358  T
Q  322 taactag 328  Q
    |||||||    
T  26488357 taactag 26488351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 39677666 - 39677791
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| |||||||  ||||||| ||||||||||    
T  39677666 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggtaattttggtattattgta 39677764  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||| |||||||||    
T  39677765 aaattttaaataaatttaggtgtaact 39677791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 232 - 326
Target Start/End: Original strand, 7327688 - 7327782
Alignment:
Q  232 ttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||| || ||||| ||| |||||| ||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  7327688 ttcagaatgatcataaaaga-tgagtttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttggatgtaact 7327782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 222 - 349
Target Start/End: Original strand, 43957841 - 43957968
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||| || |||||| ||| ||| |||||||| ||||||||||| |||||||||||||||||| |    
T  43957841 ggggtaagggttcagaatgatcataaaagatgggtttttaaaattttacatgaaaagggcaattttggtattattgtaaaattttaaataaatttggggg 43957940  T
Q  322 taactagaattatatggagtgagactag 349  Q
    |||||||  || | ||||||| ||||||    
T  43957941 taactagttttttttggagtgtgactag 43957968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 222 - 348
Target Start/End: Complemental strand, 44878148 - 44878022
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttt-tagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggt 320  Q
    ||||||| ||||||||| ||| || ||||| ||| ||| |||||||||||| |||||||||||||||  |||||||||||  |||||||||||||||  |    
T  44878148 ggggtgaaggttcagaacgatcataaaaga-tgagtttctagaaatttacatgaagaggacaattttagtattattgtaaatttttaaataaatttgaat 44878050  T
Q  321 gtaactagaattatatggagtgagacta 348  Q
    ||||||| |||| ||||| |||||||||    
T  44878049 gtaactaaaattgtatggggtgagacta 44878022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 28573784 - 28573854
Alignment:
Q  256 tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    |||||| ||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  28573784 tttttaaaaatttacatgaagagggcaattttgatattactgtaaaattttaaataaatttgggtgtaact 28573854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 36432475 - 36432572
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || ||||| || |||||| ||||||||| ||||||| |||||||||  ||||||||| ||||||||||||||| |||||||||    
T  36432475 agggttcagaatgatcataaaaga-tggtttttaaaaatttacatgaagagggcaattttgacgttattgtaaaattttaaataaatttaggtgtaact 36432572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 223 - 328
Target Start/End: Original strand, 29933516 - 29933621
Alignment:
Q  223 gggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgt 322  Q
    |||| |||||||||||| || || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||| | |||    
T  29933516 gggtaagggttcagaataatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttagatgt 29933615  T
Q  323 aactag 328  Q
    ||||||    
T  29933616 aactag 29933621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 200 - 345
Target Start/End: Original strand, 7326399 - 7326544
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatga--tttttagaaatttacaagaagaggacaattttgatattattg 297  Q
    |||||||||||||||||||| |||  | | |||||| |||||| |||||| ||||   ||||||||| |||||| | ||||| ||||||   |||||||     
T  7326399 atggtggtttgtgggtgaaagaggt-taaaggttcaaaatgatcatgaaa-aatggggtttttagaattttacatggagagggcaatttcagtattattc 7326496  T
Q  298 taagattttaaataaatttgggtgtaactagaattatatggagtgaga 345  Q
    ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  7326497 taaaattttaaataaatttgggtgtaactaaaattatatggggtgaga 7326544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 7554422 - 7554526
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| |||||||| |||||| || |||||  | |||||| ||||||||| ||||| | |||||||| ||||||||||| |||| |||||||||||||||    
T  7554422 ggggtaagggttcaaaatgatcataaaagatgggtttttaaaaatttacatgaagatggcaattttggtattattgtaaaatttgaaataaatttgggtg 7554521  T
Q  322 taact 326  Q
    |||||    
T  7554522 taact 7554526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 200 - 324
Target Start/End: Complemental strand, 29923728 - 29923605
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| |||||||| |||||| || |||||  | |||||| ||||||||| ||||||| |||||||  ||||||||||    
T  29923728 atggtgatttgtggatgaaag-ggggtaagggttcaaaatgatcataaaagataggtttttaaaaatttacatgaagagggcaattttagtattattgta 29923630  T
Q  300 agattttaaataaatttgggtgtaa 324  Q
    | ||||||||||||||| |||||||    
T  29923629 aaattttaaataaatttaggtgtaa 29923605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 28867676 - 28867801
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgt 298  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || ||||| ||| |||||| ||||||||| ||||||  |||||||| |||||||||    
T  28867676 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaaga-tgagtttttaaaaatttacatgaagagagcaattttggtattattgt 28867773  T
Q  299 aagattttaaataaatttgggtgtaact 326  Q
    || |||||||||||||||  ||||||||    
T  28867774 aaaattttaaataaatttaagtgtaact 28867801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 33961789 - 33961887
Alignment:
Q  228 agggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| |  ||||| ||| |||||| ||||||||| ||||| | |||||||||||||||||||| ||||||||||||||| |||||||||    
T  33961789 agggttcagaatgatcagaaaaga-tgagtttttaaaaatttacatgaagatggcaattttgatattattgtaaaattttaaataaatttaggtgtaact 33961887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 326
Target Start/End: Complemental strand, 20492575 - 20492505
Alignment:
Q  256 tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||| ||||||||||||||| | |||||||    
T  20492575 tttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttcgatgtaact 20492505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 324
Target Start/End: Complemental strand, 55541930 - 55541828
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||| || |||||| ||||||  |||||||| ||||||||||| |||||||||||||||| |||    
T  55541930 ggggtaagggttcagaatgatcataaaagatgggtttttaaaattttacatgaagagagcaattttggtattattgtaaaattttaaataaatttgagtg 55541831  T
Q  322 taa 324  Q
    |||    
T  55541830 taa 55541828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 219 - 326
Target Start/End: Original strand, 55282451 - 55282558
Alignment:
Q  219 aaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgg 318  Q
    |||| ||| ||||||||||||||| || ||| |  | |||||| ||| ||||| ||||||| |||||||| ||||||||||| ||||||||||||||| |    
T  55282451 aaagaggtaagggttcagaatgatcataaaatatgggtttttaaaaaattacatgaagagggcaattttggtattattgtaaaattttaaataaatttag 55282550  T
Q  319 gtgtaact 326  Q
     |||||||    
T  55282551 atgtaact 55282558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 41764681 - 41764765
Alignment:
Q  231 gttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaattt 316  Q
    |||||||||||| || |||||    |||||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  41764681 gttcagaatgatcataaaagataagtttttaaaaatttacatgaagag-acaattttgatattattgtaaaattttaaataaattt 41764765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 352
Target Start/End: Original strand, 23115277 - 23115327
Alignment:
Q  302 attttaaataaatttgggtgtaactagaattatatggagtgagactagaaa 352  Q
    ||||||||||||||||  ||||||||||||||||| |  ||||||||||||    
T  23115277 attttaaataaatttgaatgtaactagaattatataggatgagactagaaa 23115327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 7818464 - 7818532
Alignment:
Q  284 ttttgatattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaa 352  Q
    ||||| ||||||| |||  |||||| ||||||||||||||||||||| |||| || ||| || ||||||    
T  7818464 ttttggtattattataaatttttaagtaaatttgggtgtaactagaaatatacggggtgcgaatagaaa 7818532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 5458355 - 5458233
Alignment:
Q  232 ttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaactagaat 331  Q
    ||||||||||| || |||||  | |||||||||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  5458355 ttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttgggtgtaactagaat 5458256  T
Q  332 tatatggagtgagactagaaaga 354  Q
    |||||||  ||||||||| ||||    
T  5458255 tatatgggatgagactagcaaga 5458233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 25487249 - 25487347
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || |||||  |||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  25487249 agggttcagaatgatcataaaagatggatttttagaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 25487347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 27719368 - 27719243
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| ||||| |||| | ||||||||||||||| || |||||  | |||||||||||||||| ||||||| |||||||| ||||||||||    
T  27719368 atggtgatttgtggatgaaagaggg-taagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtattattgta 27719270  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  27719269 aaattttaaataaatttgggtgtaact 27719243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 45084350 - 45084244
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  |||||||| ||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  45084350 ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttgggtg 45084251  T
Q  322 taactag 328  Q
    |||||||    
T  45084250 taactag 45084244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 20819060 - 20818956
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||||||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  20819060 ggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttgggtg 20818961  T
Q  322 taact 326  Q
    |||||    
T  20818960 taact 20818956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 200 - 328
Target Start/End: Original strand, 38098782 - 38098909
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||| ||| || |||||  | |||||| ||||||||| |||||||||||||||| ||||||||||    
T  38098782 atggtgatttgtggatgaaag-ggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgta 38098880  T
Q  300 agattttaaataaatttgggtgtaactag 328  Q
    | |||||||||||||||||||||||||||    
T  38098881 aaattttaaataaatttgggtgtaactag 38098909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 35393519 - 35393644
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  35393519 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 35393617  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  35393618 aaattttaaataaatttgggtgtaact 35393644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 356
Target Start/End: Original strand, 1104960 - 1105097
Alignment:
Q  219 aaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgg 318  Q
    ||||||||||| ||||||||| || || |||||  | ||||||| |||||||| |||||   |||||||| ||||||||||| ||||||||||||||| |    
T  1104960 aaaggggtgagagttcagaattatcataaaagatgggtttttagtaatttacatgaagaaagcaattttggtattattgtaaaattttaaataaatttag 1105059  T
Q  319 gtgtaactagaattatatggagtgagactagaaagagt 356  Q
    ||||||| |||||||||||  |||||||||| ||||||    
T  1105060 gtgtaaccagaattatatgaggtgagactagcaagagt 1105097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 26416318 - 26416422
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| |||||||||||| || || |||||  | |||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||| ||    
T  26416318 ggggtaagggttcagaataatcataaaagatgggtttttagaaatttacatgaagaggaccattttgatattattgtaaaattttaaataaatttggatg 26416417  T
Q  322 taact 326  Q
    |||||    
T  26416418 taact 26416422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 8352479 - 8352381
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  8352479 agggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttgggtgtaact 8352381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 30700014 - 30700139
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||   ||||||| |||||||||  |||||| |||||||||||||||||||    
T  30700014 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgaatttttaaaaatttacacaaagagggcaattttgatattattgta 30700112  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||| ||||||||    
T  30700113 aaattttaaataaatttgagtgtaact 30700139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 200 - 324
Target Start/End: Complemental strand, 30655127 - 30655004
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || ||| |  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  30655127 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaaaataggtttttaaaaatttacatgaagagggcaattttggtattattgta 30655029  T
Q  300 agattttaaataaatttgggtgtaa 324  Q
    | |||||||||||||||||||||||    
T  30655028 aaattttaaataaatttgggtgtaa 30655004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 12986770 - 12986672
Alignment:
Q  228 agggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || ||||| ||| |||||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||| |||||||||    
T  12986770 agggttcagaatgatcataaaaga-tgagtttttaaaaatttacacgaagagggcaattttgatattattgtaaaattttaaataaatttaggtgtaact 12986672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 357
Target Start/End: Complemental strand, 13174346 - 13174207
Alignment:
Q  219 aaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgg 318  Q
    ||||||||||  ||||| |||||| |||||| || | |||||| ||||||||  |||||||  ||||| | ||||||||||| ||||||| ||||||||     
T  13174346 aaaggggtgaatgttcataatgatcatgaaaaaagggtttttaaaaatttacttgaagaggctaatttcggtattattgtaaaattttaagtaaatttga 13174247  T
Q  319 gtgtaactagaattatatg-gagtgagactagaaagagtc 357  Q
    ||||||||| ||||||||| | ||||||||||||||||||    
T  13174246 gtgtaactaaaattatatgagggtgagactagaaagagtc 13174207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 483155 - 483280
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| |||||||| |||||| || |||||  | |||||| ||||||||| |||||||||||||||  ||||||||||    
T  483155 atggtgatttgtggatgaaag-ggggtaagggttcaaaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttagtattattgta 483253  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||||| |||||||    
T  483254 aaattttaaataaatttggatgtaact 483280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 11020529 - 11020404
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||| | ||||||| |||||||| ||||||||||    
T  11020529 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttatatgaagagggcaattttggtattattgta 11020431  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||| ||||||||||    
T  11020430 aaattttaaataaattcgggtgtaact 11020404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 326
Target Start/End: Original strand, 24757750 - 24757890
Alignment:
Q  184 tattgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaa 283  Q
    ||||||||||| ||  |||||| ||||||| |||||| ||||| || |||||||||||| || ||| |  | |||||| ||||||||| |||||||||||    
T  24757750 tattgattgcacatctatggtgatttgtggatgaaaa-ggggtaagagttcagaatgatcataaaa-atgggtttttaaaaatttacatgaagaggacaa 24757847  T
Q  284 ttttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||  ||||||||||| ||||||||||||||||| |||||||    
T  24757848 ttttagtattattgtaaaattttaaataaatttggatgtaact 24757890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 29997620 - 29997495
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| |||||||||||| || || |||||  | |||||| ||||||||| ||||| | |||||||| ||||||||||    
T  29997620 atggtgatttgtggatgaaag-ggggtaagggttcagaataatcataaaagatgggtttttaaaaatttacatgaagaaggcaattttggtattattgta 29997522  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  29997521 aaattttaaataaatttgggtgtaact 29997495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 36781757 - 36781653
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggt 320  Q
    ||||| |||||||| |||||| || ||||| ||| |||||| ||||||||| ||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  36781757 ggggtaagggttcaaaatgatcataaaaga-tgagtttttaaaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttgggt 36781659  T
Q  321 gtaact 326  Q
    ||||||    
T  36781658 gtaact 36781653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 200 - 354
Target Start/End: Complemental strand, 18574920 - 18574772
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaat-gatttttagaaatttacaagaagaggacaattttgatattattgt 298  Q
    |||||| ||||||| |||||  |||||||||||||| |||||||||| |||||  | |||||| ||||||||| |||||||  ||||||| |||||||||    
T  18574920 atggtgatttgtggatgaaag-ggggtgagggttcaaaatgataatggaagaagagttttttacaaatttacatgaagagggtaattttggtattattgt 18574822  T
Q  299 aagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaaga 354  Q
    ||      |||||||| | ||||||||||||||||||||  |||||||||||||||    
T  18574821 aa------aaataaatctaggtgtaactagaattatatgctgtgagactagaaaga 18574772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 20187577 - 20187473
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| || ||||| |||||| || |||||  | |||||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  20187577 ggggtaagagttcataatgatcataaaagatgggtttttaaaaatttacatgaagatgacaattttgatattattgtaaaattttaaataaatttaggtg 20187478  T
Q  322 taact 326  Q
    |||||    
T  20187477 taact 20187473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 20206646 - 20206542
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| || ||||| |||||| || |||||  | |||||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  20206646 ggggtaagagttcataatgatcataaaagatgggtttttaaaaatttacatgaagatgacaattttgatattattgtaaaattttaaataaatttaggtg 20206547  T
Q  322 taact 326  Q
    |||||    
T  20206546 taact 20206542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 33411172 - 33411046
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaa-tttacaagaagaggacaattttgatattattgt 298  Q
    |||||| ||||||| ||||| |||| | |||||||| |||||| || |||||  | |||||| ||| |||||| ||||||| |||||||| |||||||||    
T  33411172 atggtgatttgtggatgaaagaggg-taagggttcaaaatgatcataaaagatgggtttttaaaaaatttacatgaagagggcaattttggtattattgt 33411074  T
Q  299 aagattttaaataaatttgggtgtaact 326  Q
    || |||||||||||||||||||||||||    
T  33411073 aaaattttaaataaatttgggtgtaact 33411046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 39780412 - 39780313
Alignment:
Q  228 agggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || |||||  |  |||||| ||||||||| ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||    
T  39780412 agggttcagaatgatcataaaagatggggtttttaaaaatttacatgaagagggcaattttgatattattataaaattttaaataaatttgggtgtaact 39780313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 326
Target Start/End: Complemental strand, 31097586 - 31097516
Alignment:
Q  256 tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    |||||| ||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  31097586 tttttaaaaatttacatgaagaagacaattttggtattattgtaaaattttaaataaatttgggtgtaact 31097516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 228 - 324
Target Start/End: Complemental strand, 32834688 - 32834592
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaa 324  Q
    |||||||||||| || || ||| |  |||||||| ||||||||| ||||| |||||||||| ||||||||||| ||||||||||||||| |||||||    
T  32834688 agggttcagaataatcataaaaaatggatttttaaaaatttacatgaagatgacaattttggtattattgtaaaattttaaataaatttaggtgtaa 32834592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 20525125 - 20524969
Alignment:
Q  142 atcaatggaatagatgttgattcaattgatgatttttgtaggtattgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatga 241  Q
    ||||||| || |||||||||||||||   |  |||| |||| ||||||||||| || |||| || ||| |||||||||| ||| | | |||||| | |||    
T  20525125 atcaatgaaaaagatgttgattcaatctttagttttggtagatattgattgcacatccatgatgatttttgggtgaaaa-gggataaaggttcaaagtga 20525027  T
Q  242 taatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaa 300  Q
    ||||||||||| | |||| | ||||||||| ||||| |||||||| | |||||||||||    
T  20525026 taatgaaagaagg-ttttaaaaaatttacatgaagaagacaatttcggtattattgtaa 20524969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 29225977 - 29226034
Alignment:
Q  279 gacaattttgatattattgtaagattttaaataaatttgggtgtaactagaattatat 336  Q
    |||||||||||||||||||||| ||||||||||||||    |||||||||||||||||    
T  29225977 gacaattttgatattattgtaaaattttaaataaattgcattgtaactagaattatat 29226034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 16584468 - 16584399
Alignment:
Q  282 aattttgatattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaa 352  Q
    ||||||| ||||||| ||| ||||||| |||||||||||||||| |||| ||||| ||||| |||||||||    
T  16584468 aattttggtattattataaaattttaagtaaatttgggtgtaaccagaa-tatatagagtgtgactagaaa 16584399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 200 - 328
Target Start/End: Original strand, 2380291 - 2380418
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || ||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  2380291 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagattgatttttaaaaatttacatgaagaggacaattttggtattattgta 2380389  T
Q  300 agattttaaataaatttgggtgtaactag 328  Q
    | | |||||||||||||||||||||||||    
T  2380390 aaaatttaaataaatttgggtgtaactag 2380418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 184 - 326
Target Start/End: Original strand, 33965429 - 33965570
Alignment:
Q  184 tattgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaa 283  Q
    ||||| ||||| ||| |||||| ||||||| ||||| ||||   ||||||||||||||| || |||||  | |||||| ||||||||| |||||||||||    
T  33965429 tattggttgcacatttatggtgatttgtggatgaaagagggca-agggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaa 33965527  T
Q  284 ttttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  33965528 ttttgatattattgtaaaattttaaataaatttgggtgtaact 33965570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 26479852 - 26479977
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || ||||| || |||||| ||||||||| |||||||||||||||| ||||||||||    
T  26479852 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagattggtttttaaaaatttacatgaagaggacaattttggtattattgta 26479950  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||| ||||||||||    
T  26479951 aaattttaaataaattggggtgtaact 26479977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 200 - 328
Target Start/End: Original strand, 19390571 - 19390698
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||| ||||| ||||||||||| ||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  19390571 atggtgatttgtggatgaaaa-ggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 19390669  T
Q  300 agattttaaataaatttgggtgtaactag 328  Q
    | |||||||||||||||||||||||||||    
T  19390670 aaattttaaataaatttgggtgtaactag 19390698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 18375884 - 18375744
Alignment:
Q  87 gataaatagaaactcgaagaaatttacgaaattcactc----gtatgaatcgagtacttatcaatggaatagatgttgattcaattgatgatttttgtag 182  Q
    |||||||||||||||||||||||||| |||||| |||     |||||||| ||||||  ||| || ||| |||||||||||||||||  |||||| ||||    
T  18375884 gataaatagaaactcgaagaaatttatgaaatttacttacttgtatgaatagagtacggatcgatagaaaagatgttgattcaattggcgattttagtag 18375785  T
Q  183 gtattgattgcatattcatggtggtttgtgggtgaaaaagg 223  Q
    ||||||||| ||||| | |||||||||||||||||||||||    
T  18375784 gtattgattacatatccttggtggtttgtgggtgaaaaagg 18375744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 12242848 - 12242742
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||| ||||||||| |||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  12242848 ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttaggtg 12242749  T
Q  322 taactag 328  Q
    |||||||    
T  12242748 taactag 12242742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 21866983 - 21867108
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  21866983 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 21867081  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  21867082 aaattttaaataaatttgggtgtaact 21867108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 25336651 - 25336526
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| | |||||||||| || || |||||  |||||||| ||||||||| ||| |||||||||||||||||||||||    
T  25336651 atggtgatttgtggatgaaag-ggggtaaaggttcagaataatcataaaagatagatttttaaaaatttacatgaaaaggacaattttgatattattgta 25336553  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  25336552 aaattttaaataaatttgggtgtaact 25336526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 200 - 324
Target Start/End: Original strand, 39430259 - 39430382
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgt 298  Q
    |||||| ||||||| |||||| ||||| ||||||||||||||| || ||| | ||| |||||||||||||||| |||||| ||||||||| |||||||||    
T  39430259 atggtgatttgtggatgaaaa-ggggtaagggttcagaatgatcataaaata-tgagtttttagaaatttacatgaagagaacaattttggtattattgt 39430356  T
Q  299 aagattttaaataaatttgggtgtaa 324  Q
    || |||||||||||||||||||||||    
T  39430357 aaaattttaaataaatttgggtgtaa 39430382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 4049564 - 4049461
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| |||||||||||| || || ||||| || |||||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  4049564 ggggtaagggttcagaataatcataaaaga-tggtttttaaaaatttacatgaagaagacaattttgatattattgtaaaattttaaataaatttgggtg 4049466  T
Q  322 taact 326  Q
    |||||    
T  4049465 taact 4049461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 41568706 - 41568831
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgt 298  Q
    |||||| ||||||| |||||| ||||| |||||||| |||||| || ||||| ||| |||||||||||||||| |||||||| ||||||| |||||||||    
T  41568706 atggtgatttgtggatgaaaa-ggggtaagggttcaaaatgatcataaaaga-tgagtttttagaaatttacatgaagaggataattttggtattattgt 41568803  T
Q  299 aagattttaaataaatttgggtgtaact 326  Q
    || ||||||||||||||| |||||||||    
T  41568804 aaaattttaaataaatttaggtgtaact 41568831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 8113787 - 8113689
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || |||||  | |||||| ||||||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||||||    
T  8113787 agggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattatagtaaaattttaaataaatttgggtgtaact 8113689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 11124333 - 11124458
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| |||||||| |||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  11124333 atggtgatttgtggatgaaag-ggggtaagggttcaaaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 11124431  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  11124432 aaattttaaataaatttgggtgtaact 11124458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 14287451 - 14287576
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| | ||||||||||||| || |||||  | |||||| ||||||||| |||||||||||||||| ||||||||||    
T  14287451 atggtgatttgtggatgaaag-ggggtaaaggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgta 14287549  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||| |||||||||    
T  14287550 aaattttaaataaatttaggtgtaact 14287576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 30787143 - 30787268
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||| ||| |||||||| ||||||||||    
T  30787143 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaatagggcaattttggtattattgta 30787241  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  30787242 aaattttaaataaatttgggtgtaact 30787268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 200 - 324
Target Start/End: Complemental strand, 2357464 - 2357341
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| |||||||||||||||  ||||||||||    
T  2357464 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttagtattattgta 2357366  T
Q  300 agattttaaataaatttgggtgtaa 324  Q
    | |||||||||||||||| ||||||    
T  2357365 aaattttaaataaatttgagtgtaa 2357341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 223
Target Start/End: Complemental strand, 18925130 - 18924990
Alignment:
Q  86 cgataaatagaaactcgaagaaatttacgaaattcactc----gtatgaatcgagtacttatcaatggaatagatgttgattcaattgatgatttttgta 181  Q
    ||||||||| ||||||||||||||||| ||||||||||     |||||||| |||||| ||||||||||| | ||||| |||||||||  |||||| |||    
T  18925130 cgataaataaaaactcgaagaaatttatgaaattcacttatttgtatgaatagagtacatatcaatggaaaatatgtt-attcaattggcgattttagta 18925032  T
Q  182 ggtattgattgcatattcatggtggtttgtgggtgaaaaagg 223  Q
    | ||||||||||||||  || ||||||| |||||||||||||    
T  18925031 gatattgattgcatatctatagtggtttctgggtgaaaaagg 18924990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 326
Target Start/End: Original strand, 2372076 - 2372217
Alignment:
Q  184 tattgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaa 283  Q
    ||||||||||| ||  |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  |||||||| ||||||||| ||||||| |||    
T  2372076 tattgattgcacatctatggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagagggcaa 2372174  T
Q  284 ttttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||  ||||||||||| | ||||||||||||| | |||||||    
T  2372175 ttttagtattattgtaaaagtttaaataaatttagatgtaact 2372217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 20115188 - 20115063
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| ||||| |||| | | ||||||||||||| || |||||  | |||| | ||||||||| |||||||| ||||||| ||||||||||    
T  20115188 atggtgatttgtggatgaaagaggg-taaaggttcagaatgatcataaaagatgggttttaaaaaatttacatgaagaggaaaattttggtattattgta 20115090  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  20115089 aaattttaaataaatttgggtgtaact 20115063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 31547301 - 31547399
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || |||||   ||||||| ||||||||| ||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  31547301 agggttcagaatgatcataaaagatgaatttttaaaaatttacatgaagatgacaattttggtattattgtaaaattttaaataaatttgggtctaact 31547399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 17977767 - 17977872
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggt 320  Q
    ||||| ||||||||||||||| || |||||  |  |||||| ||||||||| ||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  17977767 ggggtaagggttcagaatgatcataaaagatggggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttgggt 17977866  T
Q  321 gtaact 326  Q
    ||||||    
T  17977867 gtaact 17977872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 11978905 - 11978764
Alignment:
Q  184 tattgattgcatattcatggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaa 283  Q
    ||||||||||| ||  |||||| ||||||| |||||  ||| | || |||||||||||| || ||| |  | |||||| |||||||||  |||| |||||    
T  11978905 tattgattgcacatctatggtgatttgtggatgaaag-gggataagagttcagaatgatcataaaaaatgggtttttaaaaatttacagaaagatgacaa 11978807  T
Q  284 ttttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||| ||||||||||| ||||||||||||||| |||||||||    
T  11978806 ttttggtattattgtaaaattttaaataaatttaggtgtaact 11978764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 6034512 - 6034413
Alignment:
Q  228 agggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || |||||  |  |||||| ||||||||| ||||||| |||||||  ||||||| ||| |||||||||||||||||||||||||    
T  6034512 agggttcagaatgatcataaaagatggggtttttaaaaatttacatgaagagggcaattttagtattattataaaattttaaataaatttgggtgtaact 6034413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 228 - 324
Target Start/End: Original strand, 1222650 - 1222746
Alignment:
Q  228 agggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaa 324  Q
    ||||||||||||||| || ||||| ||| |||||| ||||||||| ||||||  |||||||  ||||||||||| ||| |||||||||||||||||||    
T  1222650 agggttcagaatgatcataaaaga-tgagtttttaaaaatttacatgaagagagcaattttagtattattgtaaaattctaaataaatttgggtgtaa 1222746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 43652968 - 43652906
Alignment:
Q  290 tattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaa 352  Q
    ||||||||||| ||||||||||||||||||| |||| |||| ||||||| ||| |||||||||    
T  43652968 tattattgtaaaattttaaataaatttgggtataaccagaaatatatggggtgtgactagaaa 43652906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 17435400 - 17435356
Alignment:
Q  282 aattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||    
T  17435400 aattttgatattattgtaaaattttaaataaatttaagtgtaact 17435356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 932125 - 932072
Alignment:
Q  277 aggacaattttgatattattgtaagattttaaataaatttgggtgtaactagaa 330  Q
    |||||||||||| ||||||| ||| |||| || ||||| |||||||||||||||    
T  932125 aggacaattttggtattattataaaatttaaagtaaatatgggtgtaactagaa 932072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 9729418 - 9729511
Alignment:
Q  127 atgaatcgagtacttatcaatggaatagatgttgattcaattgatgatttttgtaggtattgattgcatattcatggtggtttgtgggtgaaaa 220  Q
    |||||| ||||||  ||||||| || ||||||  |||||||   | ||||| |||| ||||||||||| || ||||||||||||||||| ||||    
T  9729418 atgaatagagtacggatcaatgaaaaagatgtgaattcaatctttaattttggtagttattgattgcacatccatggtggtttgtgggtaaaaa 9729511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 9141767 - 9141715
Alignment:
Q  278 ggacaattttgatattattgtaagattttaaataaatttgggtgtaactagaa 330  Q
    ||||||||||| ||||| || || ||||||| | |||||||||||||||||||    
T  9141767 ggacaattttggtattaatgcaaaattttaagttaatttgggtgtaactagaa 9141715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 35006464 - 35006508
Alignment:
Q  281 caattttgatattattgtaagattttaaataaatttgggtgtaac 325  Q
    ||||||||||||||||||||  |||||| ||||||| ||||||||    
T  35006464 caattttgatattattgtaaacttttaagtaaatttaggtgtaac 35006508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 226 - 357
Target Start/End: Complemental strand, 11212 - 11081
Alignment:
Q  226 tgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaac 325  Q
    ||||||||||||||||| || |||||  | ||||||| ||| |||| ||||||| |||||||| ||||||||||| ||||||||||||||| | ||||||    
T  11212 tgagggttcagaatgatcataaaagatgggtttttagtaatatacatgaagagggcaattttgttattattgtaaaattttaaataaatttagatgtaac 11113  T
Q  326 tagaattatatggagtgagactagaaagagtc 357  Q
    ||||||||||||| |||||||||| |||||||    
T  11112 tagaattatatggggtgagactagcaagagtc 11081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 7e-31; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 200 - 328
Target Start/End: Original strand, 40431280 - 40431407
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  40431280 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgta 40431378  T
Q  300 agattttaaataaatttgggtgtaactag 328  Q
    | | |||||||||||||||||||||||||    
T  40431379 aaaatttaaataaatttgggtgtaactag 40431407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 204 - 326
Target Start/End: Original strand, 47020478 - 47020599
Alignment:
Q  204 tggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgtaaga 302  Q
    |||||||||| |||||  ||||| ||||||||||||||| || ||||| ||| |||||| ||||||||| |||||||||||||||||||||||||||| |    
T  47020478 tggtttgtggatgaaag-ggggtaagggttcagaatgatcataaaaga-tgagtttttaaaaatttacatgaagaggacaattttgatattattgtaaaa 47020575  T
Q  303 ttttaaataaatttgggtgtaact 326  Q
    ||||||||||||||||||||||||    
T  47020576 ttttaaataaatttgggtgtaact 47020599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 200 - 328
Target Start/End: Complemental strand, 42076461 - 42076334
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| | ||||||||||||| || |||||  |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  42076461 atggtgatttgtggatgaaat-ggggtaacggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgta 42076363  T
Q  300 agattttaaataaatttgggtgtaactag 328  Q
    | | |||||||||||||||||||||||||    
T  42076362 aaaatttaaataaatttgggtgtaactag 42076334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 222 - 357
Target Start/End: Original strand, 3112101 - 3112236
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||||| |||||| |||||| || |||||  | ||||||| |||||||| ||||| |  ||||||| ||||||||||| ||||||||||||||||||||    
T  3112101 ggggtgaaggttcataatgatcataaaagataggtttttagtaatttacatgaagatggtaattttggtattattgtaaaattttaaataaatttgggtg 3112200  T
Q  322 taactagaattatatggagtgagactagaaagagtc 357  Q
    |||||||||||||||||  ||||||||  |||||||    
T  3112201 taactagaattatatgggatgagactaacaagagtc 3112236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 3887797 - 3887672
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||||||||||||||    
T  3887797 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttgatattattgta 3887699  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||| ||||||||    
T  3887698 aaattttaaataaatttgagtgtaact 3887672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 5544309 - 5544434
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| ||||||| |||||||||||    
T  5544309 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttaatattattgta 5544407  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  5544408 aaattttaaataaatttgggtgtaact 5544434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 9741231 - 9741356
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  9741231 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 9741329  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  9741330 aaattttaaataaatttgggtgtaact 9741356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 18676761 - 18676886
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  |||||||| ||||||||| ||||| | |||||||| ||||||||||    
T  18676761 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagatggcaattttggtattattgta 18676859  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  18676860 aaattttaaataaatttgggtgtaact 18676886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 31587923 - 31588048
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  31587923 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgta 31588021  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||||||||||||    
T  31588022 aaattttaaataaatttgggtgtaact 31588048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 42697512 - 42697406
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||   ||||||| |||||||||  ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  42697512 ggggtaagggttcagaatgatcataaaagatgaatttttaaaaatttacataaagaggacaattttggtattattgtaaaattttaaataaatttgggtg 42697413  T
Q  322 taactag 328  Q
    |||||||    
T  42697412 taactag 42697406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 47455156 - 47455052
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  47455156 ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttgggtg 47455057  T
Q  322 taact 326  Q
    |||||    
T  47455056 taact 47455052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 30888418 - 30888522
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || ||| |  | |||||||||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||||| ||    
T  30888418 ggggtaagggttcagaatgatcataaaatatgggtttttagaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttggatg 30888517  T
Q  322 taact 326  Q
    |||||    
T  30888518 taact 30888522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 228 - 324
Target Start/End: Complemental strand, 31622036 - 31621940
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaa 324  Q
    ||||||||||||||| || |||||   ||||||| ||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  31622036 agggttcagaatgatcataaaagatgaatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttggatgtaa 31621940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 44508631 - 44508505
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaa-tttacaagaagaggacaattttgatattattgt 298  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||| |||||| ||||||| |||||||| |||||||||    
T  44508631 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaaatttacatgaagagggcaattttggtattattgt 44508533  T
Q  299 aagattttaaataaatttgggtgtaact 326  Q
    || |||||||||||||||||||||||||    
T  44508532 aaaattttaaataaatttgggtgtaact 44508505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 12726223 - 12726348
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||||| |||||||  ||||||| ||||||||||    
T  12726223 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggtaattttggtattattgta 12726321  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||| ||||||||||    
T  12726322 aaattttaaataaattcgggtgtaact 12726348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 44291158 - 44291054
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| || ||||| |||||| || |||||  | |||||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  44291158 ggggtaagagttcataatgatcataaaagatgggtttttaaaaatttacatgaagatgacaattttgatattattgtaaaattttaaataaatttaggtg 44291059  T
Q  322 taact 326  Q
    |||||    
T  44291058 taact 44291054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 326
Target Start/End: Original strand, 9870437 - 9870532
Alignment:
Q  231 gttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| |||||  | |||||||||||||||| |||||||||||||||| |||||||||||  |||| ||| ||||||| |||||||    
T  9870437 gttcagaatgataataaaagatgggtttttagaaatttacatgaagaggacaattttgttattattgtaaactttttaattaatttggatgtaact 9870532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 318
Target Start/End: Complemental strand, 44061935 - 44061818
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgt 298  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || ||||| ||| |||||| ||||||||| ||||||  ||||||||||||||||||    
T  44061935 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaaga-tgagtttttaaaaatttacatgaagagagcaattttgatattattgt 44061838  T
Q  299 aagattttaaataaatttgg 318  Q
    || |||||||||||||||||    
T  44061837 aaaattttaaataaatttgg 44061818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 12848567 - 12848442
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||| ||||||| | |||||||  ||||||| ||||||||||    
T  12848567 atggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttatatgaagagggtaattttggtattattgta 12848469  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||| |||||||||    
T  12848468 aaattttaaataaatttaggtgtaact 12848442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 41118782 - 41118907
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| |||||||||||| || || |||||  |||||||| ||||||||| ||||| | |||||||| |||||||||     
T  41118782 atggtgatttgtggatgaaag-ggggtaagggttcagaattatcataaaagatggatttttaaaaatttacatgaagaaggcaattttggtattattgtt 41118880  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||| |||||||||    
T  41118881 aaattttaaataaatttaggtgtaact 41118907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 277 - 356
Target Start/End: Original strand, 38168128 - 38168207
Alignment:
Q  277 aggacaattttgatattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaagagt 356  Q
    |||||||||||| |||| |||||| ||||||| ||| ||||| |||||||||||||||| || |||||||||||||||||    
T  38168128 aggacaattttggtatttttgtaaaattttaagtaattttggatgtaactagaattatacggggtgagactagaaagagt 38168207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 40186711 - 40186836
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatga-tttttagaaatttacaagaagaggacaattttgatattattgt 298  Q
    |||||| ||||||| |||||  ||||| || |||||||||||| || ||||| ||| |||||| ||||||||| ||||||| || ||||| ||||||| |    
T  40186711 atggtgatttgtggatgaaag-ggggtaagagttcagaatgatcataaaaga-tgagtttttaaaaatttacatgaagagggcacttttggtattattat 40186808  T
Q  299 aagattttaaataaatttgggtgtaact 326  Q
    || ||||||||||||||||| |||||||    
T  40186809 aaaattttaaataaatttggatgtaact 40186836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 40190129 - 40190188
Alignment:
Q  256 tttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaattt 316  Q
    |||||||||||||| | ||||||| |||||||||||||||||||| |||||||||||||||    
T  40190129 tttttagaaatttatatgaagagggcaattttgatattattgtaa-attttaaataaattt 40190188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 326
Target Start/End: Original strand, 38743302 - 38743353
Alignment:
Q  275 agaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||| |||||||||||||||||||| |||||||||||||||| ||||||||    
T  38743302 agagggcaattttgatattattgtaaaattttaaataaatttgagtgtaact 38743353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 357
Target Start/End: Complemental strand, 39494922 - 39494855
Alignment:
Q  290 tattattgtaagattttaaataaatttgggtgtaactagaattatatggagtgagactagaaagagtc 357  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||||   ||||||||| ||||||||    
T  39494922 tattattgtaaaattttaaataaatttaggtgtaactaaaattatataaggtgagactaaaaagagtc 39494855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 337
Target Start/End: Original strand, 27419059 - 27419174
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||||| ||||||||||||| |||||| |  | ||||||||| | |||  | ||||  |||||||| ||||||| ||| ||||||| ||||||| ||||    
T  27419059 ggggtgatggttcagaatgattatgaaaaagaggtttttagaattctacgtggagagagcaattttggtattattataaaattttaagtaaatttaggtg 27419158  T
Q  322 taactagaattatatg 337  Q
    ||| |||| |||||||    
T  27419159 taattagagttatatg 27419174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 325
Target Start/End: Original strand, 37544993 - 37545041
Alignment:
Q  277 aggacaattttgatattattgtaagattttaaataaatttgggtgtaac 325  Q
    |||||||||||||||||||||| | ||||||| |||| |||||||||||    
T  37544993 aggacaattttgatattattgttaaattttaagtaaaattgggtgtaac 37545041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0548 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 200 - 357
Target Start/End: Complemental strand, 5383 - 5228
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||||||  ||||||||||| || |||||  | |||||||||||||||| ||| ||| |||||||| ||| ||||||    
T  5383 atggtgatttgtggatgaaag-ggggtgagaattcagaatgatcataaaagatgggtttttagaaatttacatgaacagggcaattttggtataattgta 5285  T
Q  300 agattttaaataaatttgggtgtaactagaattatatggagtgagactagaaagagtc 357  Q
    | |||||||||||||||| |||||||||||||||||||| ||||||| || |||||||    
T  5284 aaattttaaataaatttgagtgtaactagaattatatgg-gtgagaccagcaagagtc 5228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 222 - 328
Target Start/End: Original strand, 27833 - 27939
Alignment:
Q  222 ggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtg 321  Q
    ||||| ||||||||||||||| || |||||  | |||||| ||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  27833 ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttgggtg 27932  T
Q  322 taactag 328  Q
    |||||||    
T  27933 taactag 27939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 6472 - 6570
Alignment:
Q  228 agggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    ||||||||||||||| || ||| |  | |||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  6472 agggttcagaatgatcataaaatatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 6570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 201 - 326
Target Start/End: Original strand, 5351 - 5475
Alignment:
Q  201 tggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgtaa 300  Q
    ||||| ||||||| |||||  ||||| ||||||||||||||| || |||||  | |||||||||||||||| |||||||||||||||| |||||| |||     
T  5351 tggtgatttgtggatgaaag-ggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagaggacaattttggtattatagtac 5449  T
Q  301 gattttaaataaatttgggtgtaact 326  Q
     ||||||||||||||||| |||||||    
T  5450 aattttaaataaatttggatgtaact 5475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1360 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold1360
Description:

Target: scaffold1360; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 944 - 1070
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatga--tttttagaaatttacaagaagaggacaattttgatattattg 297  Q
    |||||| ||||||| | |||| ||||| ||||||||||||||| || ||||| |||  |||||||||||||||| ||||||| |||||||| ||||||||    
T  944 atggtgatttgtggat-aaaagggggtaagggttcagaatgatcataaaaga-tgaggtttttagaaatttacatgaagagggcaattttggtattattg 1041  T
Q  298 taagattttaaataaatttgggtgtaact 326  Q
    ||| ||||||||||||||| |||||||||    
T  1042 taaaattttaaataaattttggtgtaact 1070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 326
Target Start/End: Original strand, 20394 - 20466
Alignment:
Q  254 gatttttagaaatttacaagaagaggacaattttgatattattgtaagattttaaataaatttgggtgtaact 326  Q
    |||||||| |||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  20394 gatttttaaaaatttacattaagagggcaattttgatattattgtaaaattttaaataaatttgggtgtaact 20466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 105706 - 105831
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| |||||||||||| || || |||||  |||||||| ||||||||| ||||| | |||||||| |||||||||     
T  105706 atggtgatttgtggatgaaag-ggggtaagggttcagaattatcataaaagatggatttttaaaaatttacatgaagaaggcaattttggtattattgtt 105804  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | ||||||||||||||| |||||||||    
T  105805 aaattttaaataaatttaggtgtaact 105831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 42682 - 42804
Alignment:
Q  200 atggtggtttgtgggtgaaaaaggggtgagggttcagaatgataatgaaagaatgatttttagaaatttacaagaagaggacaattttgatattattgta 299  Q
    |||||| ||||||| |||||  ||||| |||||||| |||||| || |||||  || ||||  ||||||||| ||||||| |||||||| ||||   |||    
T  42682 atggtgatttgtggatgaaat-ggggtaagggttcaaaatgatcataaaagatggagtttttaaaatttacatgaagagggcaattttggtatt---gta 42777  T
Q  300 agattttaaataaatttgggtgtaact 326  Q
    | |||||||||||||||| ||||||||    
T  42778 aaattttaaataaatttgagtgtaact 42804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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