View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0939_low_31 (Length: 356)

Name: NF0939_low_31
Description: NF0939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0939_low_31
NF0939_low_31
[»] chr8 (35 HSPs)
chr8 (20-217)||(24501788-24501985)
chr8 (20-193)||(26374429-26374602)
chr8 (20-193)||(42938116-42938289)
chr8 (20-217)||(42937387-42937582)
chr8 (20-217)||(2704794-2704991)
chr8 (20-217)||(7506874-7507071)
chr8 (20-217)||(42735252-42735449)
chr8 (20-217)||(5576595-5576793)
chr8 (20-192)||(10392237-10392409)
chr8 (20-193)||(23115168-23115340)
chr8 (20-217)||(41479131-41479318)
chr8 (24-217)||(43959695-43959878)
chr8 (23-186)||(10295386-10295550)
chr8 (23-186)||(14782141-14782304)
chr8 (23-186)||(44725816-44725979)
chr8 (20-186)||(43166696-43166862)
chr8 (58-186)||(9288463-9288591)
chr8 (63-186)||(4403184-4403307)
chr8 (23-183)||(18958736-18958896)
chr8 (23-186)||(26856104-26856267)
chr8 (23-186)||(19717887-19718050)
chr8 (23-183)||(39467477-39467637)
chr8 (65-187)||(4950021-4950143)
chr8 (20-175)||(32711311-32711454)
chr8 (66-186)||(39189822-39189940)
chr8 (66-173)||(13478269-13478376)
chr8 (23-186)||(18305977-18306130)
chr8 (23-186)||(32497562-32497715)
chr8 (23-186)||(7466372-7466525)
chr8 (64-172)||(8410416-8410526)
chr8 (23-127)||(16362233-16362337)
chr8 (23-116)||(31623732-31623825)
chr8 (58-116)||(4031334-4031392)
chr8 (58-127)||(37857191-37857260)
chr8 (63-127)||(42305850-42305914)
[»] chr6 (19 HSPs)
chr6 (20-217)||(6197453-6197650)
chr6 (20-193)||(1391657-1391830)
chr6 (20-192)||(2300738-2300910)
chr6 (22-176)||(28002700-28002854)
chr6 (20-193)||(29076631-29076805)
chr6 (58-193)||(29111644-29111779)
chr6 (24-186)||(31895733-31895895)
chr6 (20-187)||(7051878-7052045)
chr6 (24-186)||(34759056-34759218)
chr6 (63-186)||(34773485-34773608)
chr6 (20-186)||(7497109-7497274)
chr6 (58-186)||(14262439-14262567)
chr6 (63-186)||(31067569-31067682)
chr6 (58-186)||(30385075-30385191)
chr6 (20-158)||(656998-657122)
chr6 (78-186)||(4200443-4200541)
chr6 (144-193)||(2238668-2238717)
chr6 (63-107)||(3848286-3848330)
chr6 (152-192)||(11113733-11113773)
[»] chr3 (61 HSPs)
chr3 (20-217)||(3206181-3206378)
chr3 (20-217)||(10139122-10139319)
chr3 (20-217)||(20498242-20498439)
chr3 (20-217)||(996062-996259)
chr3 (20-193)||(19253860-19254033)
chr3 (20-193)||(33807798-33807972)
chr3 (20-217)||(37820453-37820650)
chr3 (20-193)||(3999645-3999818)
chr3 (20-193)||(6589597-6589770)
chr3 (24-193)||(54625629-54625798)
chr3 (20-193)||(29448858-29449031)
chr3 (20-193)||(40246877-40247050)
chr3 (20-217)||(35337768-35337963)
chr3 (20-187)||(33996547-33996714)
chr3 (24-193)||(44762037-44762206)
chr3 (20-193)||(25418399-25418572)
chr3 (20-193)||(53929128-53929301)
chr3 (20-176)||(51699497-51699652)
chr3 (23-193)||(6035053-6035223)
chr3 (20-192)||(52114561-52114734)
chr3 (64-193)||(5825139-5825268)
chr3 (23-186)||(40897180-40897343)
chr3 (20-158)||(22057795-22057933)
chr3 (58-186)||(18749683-18749811)
chr3 (20-185)||(29030039-29030203)
chr3 (20-139)||(1440006-1440125)
chr3 (23-186)||(17946324-17946487)
chr3 (23-186)||(36674137-36674300)
chr3 (23-186)||(44906520-44906683)
chr3 (58-186)||(32580247-32580375)
chr3 (22-193)||(27899379-27899540)
chr3 (63-186)||(34484037-34484160)
chr3 (23-186)||(11431562-11431725)
chr3 (23-186)||(48379193-48379356)
chr3 (23-173)||(51737746-51737896)
chr3 (63-186)||(54628920-54629043)
chr3 (23-186)||(26107297-26107460)
chr3 (105-193)||(6131233-6131321)
chr3 (63-173)||(31646304-31646414)
chr3 (23-149)||(52618009-52618135)
chr3 (58-186)||(50903247-50903375)
chr3 (23-186)||(52810414-52810577)
chr3 (82-193)||(1439894-1440005)
chr3 (23-182)||(20833028-20833187)
chr3 (67-161)||(55235264-55235359)
chr3 (59-193)||(52079999-52080117)
chr3 (23-186)||(10728658-10728811)
chr3 (63-127)||(10660611-10660675)
chr3 (23-186)||(39038076-39038229)
chr3 (58-186)||(37454932-37455050)
chr3 (58-175)||(6975817-6975924)
chr3 (58-127)||(39842550-39842619)
chr3 (58-186)||(50762067-50762185)
chr3 (23-116)||(23753463-23753556)
chr3 (58-121)||(539476-539539)
chr3 (64-183)||(44276466-44276571)
chr3 (140-193)||(33807680-33807733)
chr3 (20-114)||(23535890-23535983)
chr3 (118-186)||(15492874-15492942)
chr3 (129-186)||(45862983-45863040)
chr3 (130-176)||(12103733-12103779)
[»] chr5 (25 HSPs)
chr5 (20-193)||(21147101-21147274)
chr5 (24-217)||(7016714-7016907)
chr5 (20-193)||(33656040-33656213)
chr5 (22-187)||(5272924-5273089)
chr5 (20-173)||(849181-849334)
chr5 (20-187)||(139307-139474)
chr5 (24-217)||(27458925-27459117)
chr5 (20-217)||(32157869-32158070)
chr5 (24-159)||(6460830-6460965)
chr5 (23-193)||(1152102-1152272)
chr5 (23-186)||(14000111-14000274)
chr5 (23-183)||(4550266-4550426)
chr5 (21-193)||(9689693-9689864)
chr5 (58-186)||(13926003-13926131)
chr5 (58-186)||(39852417-39852545)
chr5 (23-186)||(7947579-7947742)
chr5 (22-153)||(14465266-14465397)
chr5 (23-127)||(4240517-4240621)
chr5 (63-186)||(5949185-5949298)
chr5 (23-193)||(22746334-22746496)
chr5 (23-127)||(1461203-1461307)
chr5 (67-186)||(40013718-40013827)
chr5 (20-193)||(9220716-9220879)
chr5 (23-116)||(37013951-37014044)
chr5 (20-50)||(16894044-16894074)
[»] chr2 (34 HSPs)
chr2 (20-193)||(24776390-24776563)
chr2 (20-217)||(16269726-16269923)
chr2 (20-217)||(20605271-20605468)
chr2 (20-217)||(31170602-31170799)
chr2 (20-217)||(14198555-14198752)
chr2 (20-217)||(12407415-12407612)
chr2 (25-217)||(35317102-35317294)
chr2 (20-217)||(43847681-43847878)
chr2 (20-217)||(305443-305640)
chr2 (20-193)||(5093049-5093222)
chr2 (20-217)||(22551741-22551938)
chr2 (25-173)||(1789482-1789630)
chr2 (20-187)||(32125285-32125455)
chr2 (20-217)||(9120161-9120358)
chr2 (20-153)||(44765810-44765943)
chr2 (23-186)||(28844593-28844756)
chr2 (23-186)||(33135661-33135823)
chr2 (23-186)||(10657444-10657607)
chr2 (63-186)||(18177345-18177468)
chr2 (63-186)||(25288237-25288360)
chr2 (58-168)||(26788859-26788969)
chr2 (75-186)||(43078653-43078764)
chr2 (23-129)||(28740349-28740455)
chr2 (23-127)||(7026642-7026746)
chr2 (25-186)||(13833441-13833592)
chr2 (24-125)||(26601270-26601371)
chr2 (67-193)||(10125302-10125418)
chr2 (58-186)||(3463745-3463863)
chr2 (23-116)||(3574885-3574978)
chr2 (64-127)||(379016-379079)
chr2 (58-116)||(6224626-6224684)
chr2 (23-100)||(215320-215397)
chr2 (129-186)||(6224576-6224633)
chr2 (58-107)||(21370638-21370687)
[»] chr1 (46 HSPs)
chr1 (20-217)||(19451784-19451981)
chr1 (20-217)||(21222174-21222371)
chr1 (20-217)||(45759985-45760182)
chr1 (20-217)||(50192526-50192724)
chr1 (20-193)||(6304252-6304426)
chr1 (20-217)||(49198245-49198441)
chr1 (20-187)||(35279699-35279866)
chr1 (20-174)||(45535971-45536125)
chr1 (20-217)||(47780738-47780935)
chr1 (20-187)||(49418111-49418278)
chr1 (24-193)||(35679128-35679297)
chr1 (20-217)||(47654327-47654525)
chr1 (20-217)||(28824349-28824545)
chr1 (20-183)||(32588963-32589126)
chr1 (63-187)||(31572203-31572327)
chr1 (20-193)||(29556131-29556305)
chr1 (20-158)||(730175-730314)
chr1 (23-186)||(6312604-6312767)
chr1 (23-186)||(29396395-29396558)
chr1 (58-186)||(9577439-9577567)
chr1 (20-164)||(48524346-48524490)
chr1 (23-183)||(51701610-51701770)
chr1 (23-185)||(46328072-46328234)
chr1 (20-193)||(37014640-37014813)
chr1 (58-186)||(48177469-48177597)
chr1 (58-186)||(25612222-25612350)
chr1 (20-193)||(33025539-33025703)
chr1 (63-186)||(9322507-9322630)
chr1 (63-186)||(15835060-15835183)
chr1 (63-186)||(28387400-28387523)
chr1 (66-125)||(955823-955882)
chr1 (23-186)||(38536106-38536259)
chr1 (23-186)||(38558324-38558477)
chr1 (25-186)||(29219318-29219469)
chr1 (58-149)||(51085860-51085951)
chr1 (63-183)||(48668795-48668905)
chr1 (23-116)||(18798521-18798614)
chr1 (23-182)||(5495117-5495266)
chr1 (23-107)||(49230916-49231000)
chr1 (20-159)||(47784414-47784542)
chr1 (66-116)||(31622536-31622586)
chr1 (20-80)||(22183397-22183457)
chr1 (83-173)||(38319996-38320086)
chr1 (23-116)||(45272616-45272708)
chr1 (129-157)||(955876-955904)
chr1 (137-185)||(18798615-18798663)
[»] chr7 (60 HSPs)
chr7 (20-193)||(7718361-7718534)
chr7 (20-217)||(18914710-18914907)
chr7 (20-217)||(30440831-30441028)
chr7 (20-217)||(34695308-34695505)
chr7 (20-217)||(40996624-40996821)
chr7 (24-192)||(43581090-43581258)
chr7 (20-217)||(47914301-47914498)
chr7 (20-193)||(7719259-7719432)
chr7 (20-217)||(973219-973416)
chr7 (20-217)||(47879203-47879400)
chr7 (20-193)||(12893443-12893616)
chr7 (20-193)||(44343395-44343568)
chr7 (22-217)||(20275238-20275433)
chr7 (20-217)||(39219352-39219548)
chr7 (20-217)||(34009047-34009245)
chr7 (63-193)||(32142916-32143046)
chr7 (23-193)||(10068498-10068668)
chr7 (62-163)||(43679491-43679592)
chr7 (62-193)||(7113529-7113660)
chr7 (23-186)||(23101329-23101492)
chr7 (58-186)||(28342413-28342541)
chr7 (23-186)||(3022957-3023120)
chr7 (23-186)||(29614770-29614933)
chr7 (23-186)||(39784130-39784293)
chr7 (58-165)||(12963767-12963874)
chr7 (23-186)||(18838420-18838583)
chr7 (25-186)||(28034811-28034972)
chr7 (23-183)||(33382668-33382828)
chr7 (64-186)||(7993214-7993336)
chr7 (23-186)||(8675364-8675527)
chr7 (23-186)||(9882243-9882405)
chr7 (20-125)||(31638910-31639015)
chr7 (64-183)||(43187366-43187485)
chr7 (58-193)||(12740439-12740573)
chr7 (24-193)||(9179912-9180071)
chr7 (59-174)||(727587-727692)
chr7 (63-162)||(25805763-25805862)
chr7 (23-193)||(3797066-3797226)
chr7 (20-149)||(10676463-10676592)
chr7 (78-186)||(37972873-37972981)
chr7 (23-183)||(44256775-44256935)
chr7 (24-158)||(32883814-32883948)
chr7 (67-186)||(19810874-19810983)
chr7 (78-186)||(41827390-41827498)
chr7 (23-127)||(44121965-44122069)
chr7 (58-174)||(19251605-19251711)
chr7 (25-127)||(40460772-40460874)
chr7 (23-129)||(46405494-46405600)
chr7 (23-186)||(509687-509840)
chr7 (63-174)||(1470252-1470362)
chr7 (23-127)||(37327958-37328062)
chr7 (64-127)||(29585586-29585649)
chr7 (23-127)||(33892315-33892419)
chr7 (98-176)||(10617024-10617102)
chr7 (58-116)||(47066770-47066828)
chr7 (63-116)||(17001099-17001152)
chr7 (25-127)||(39028130-39028232)
chr7 (20-173)||(44623305-44623448)
chr7 (63-122)||(447854-447913)
chr7 (129-186)||(17001049-17001106)
[»] chr4 (62 HSPs)
chr4 (20-193)||(55302876-55303049)
chr4 (20-217)||(25331164-25331361)
chr4 (20-192)||(32950837-32951009)
chr4 (20-187)||(1044840-1045007)
chr4 (20-193)||(41881082-41881256)
chr4 (20-193)||(7007407-7007580)
chr4 (19-217)||(30009653-30009851)
chr4 (20-193)||(42786717-42786890)
chr4 (20-217)||(34228559-34228756)
chr4 (20-186)||(12112978-12113144)
chr4 (20-193)||(1112926-1113099)
chr4 (20-187)||(22202048-22202215)
chr4 (30-215)||(41320853-41321038)
chr4 (20-216)||(39479332-39479530)
chr4 (20-164)||(25446083-25446227)
chr4 (20-193)||(37046450-37046625)
chr4 (21-163)||(28541732-28541874)
chr4 (20-217)||(3436626-3436823)
chr4 (20-172)||(19740929-19741081)
chr4 (58-163)||(7249795-7249900)
chr4 (20-193)||(46635648-46635815)
chr4 (32-216)||(31314719-31314893)
chr4 (23-186)||(5441440-5441603)
chr4 (23-186)||(27768092-27768255)
chr4 (23-186)||(54341180-54341343)
chr4 (20-217)||(24130957-24131145)
chr4 (61-193)||(27454078-27454210)
chr4 (24-173)||(53275876-53276025)
chr4 (25-149)||(23464993-23465117)
chr4 (58-186)||(37828409-37828537)
chr4 (23-183)||(37915863-37916023)
chr4 (23-186)||(51320957-51321120)
chr4 (24-186)||(54853475-54853637)
chr4 (58-186)||(48261198-48261326)
chr4 (20-193)||(9163109-9163274)
chr4 (20-136)||(25504696-25504812)
chr4 (64-184)||(44770862-44770982)
chr4 (23-186)||(32322127-32322290)
chr4 (63-192)||(40537161-40537280)
chr4 (23-186)||(23987250-23987403)
chr4 (20-187)||(39307259-39307426)
chr4 (99-186)||(8711978-8712065)
chr4 (64-186)||(12913301-12913413)
chr4 (64-186)||(56445362-56445474)
chr4 (99-193)||(24736447-24736541)
chr4 (58-186)||(41725196-41725321)
chr4 (23-129)||(29649731-29649837)
chr4 (23-186)||(30967316-30967469)
chr4 (64-149)||(28371001-28371086)
chr4 (58-186)||(36479249-36479366)
chr4 (23-192)||(28483935-28484093)
chr4 (23-116)||(49834890-49834983)
chr4 (118-193)||(11090435-11090510)
chr4 (23-168)||(49501546-49501681)
chr4 (23-168)||(49507611-49507746)
chr4 (78-184)||(20021424-20021531)
chr4 (58-187)||(41581795-41581923)
chr4 (58-183)||(5800049-5800164)
chr4 (58-116)||(32684065-32684123)
chr4 (58-127)||(50018322-50018391)
chr4 (119-170)||(36727972-36728023)
chr4 (93-185)||(12193135-12193227)
[»] scaffold0400 (1 HSPs)
scaffold0400 (24-217)||(15009-15202)
[»] scaffold0365 (1 HSPs)
scaffold0365 (24-217)||(15652-15845)
[»] scaffold0151 (1 HSPs)
scaffold0151 (20-217)||(38581-38777)
[»] scaffold0004 (1 HSPs)
scaffold0004 (20-193)||(102129-102302)
[»] scaffold0113 (1 HSPs)
scaffold0113 (20-193)||(38895-39068)
[»] scaffold0037 (1 HSPs)
scaffold0037 (20-187)||(100245-100412)
[»] scaffold0276 (1 HSPs)
scaffold0276 (20-192)||(540-712)
[»] scaffold0110 (1 HSPs)
scaffold0110 (63-186)||(39624-39747)
[»] scaffold0054 (1 HSPs)
scaffold0054 (65-186)||(36914-37035)
[»] scaffold0543 (1 HSPs)
scaffold0543 (63-186)||(10637-10760)
[»] scaffold1504 (1 HSPs)
scaffold1504 (58-186)||(936-1063)
[»] scaffold0042 (1 HSPs)
scaffold0042 (63-186)||(58083-58206)
[»] scaffold0306 (1 HSPs)
scaffold0306 (23-127)||(13919-14023)
[»] scaffold0152 (1 HSPs)
scaffold0152 (23-127)||(21304-21408)
[»] scaffold0922 (1 HSPs)
scaffold0922 (23-123)||(4237-4337)
[»] scaffold0839 (1 HSPs)
scaffold0839 (87-173)||(3712-3798)
[»] scaffold0347 (1 HSPs)
scaffold0347 (118-193)||(14892-14967)
[»] scaffold0007 (1 HSPs)
scaffold0007 (66-159)||(199905-199998)


Alignment Details
Target: chr8 (Bit Score: 148; Significance: 5e-78; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 24501985 - 24501788
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24501985 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 24501886  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  24501885 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 24501788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 26374602 - 26374429
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26374602 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatg 26374503  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  26374502 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 26374429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 42938289 - 42938116
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42938289 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 42938190  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  42938189 gattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgagatttcttaggattg 42938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 42937387 - 42937582
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||||||||||||  |||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42937387 tgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 42937484  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||       |||||||||||||||||    
T  42937485 gattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagattttacta 42937582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 2704991 - 2704794
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  2704991 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcaaattttgatg 2704892  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  2704891 gattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 2704794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 7507071 - 7506874
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  7507071 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaaattttgaaggattgtttaataaatcagattttgatg 7506972  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||       |||||||||||||||||    
T  7506971 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgagatttcttaggattgtttttttcttttaagattttacta 7506874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 42735449 - 42735252
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42735449 tgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagtattgtttaataaatcagattttgatg 42735350  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||| |||||       |||||||||||||||||    
T  42735349 gattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagattttacta 42735252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 5576793 - 5576595
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 118  Q
    |||||||||||||||||||||||||||||||        ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  5576793 tgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaagaattgtttaataaaccagattttgat 5576694  T
Q  119 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||       |||||||||||||||||    
T  5576693 ggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttccttttaagattttacta 5576595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 20 - 192
Target Start/End: Complemental strand, 10392409 - 10392237
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||| ||||||||||||||| ||||||||||       ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10392409 tgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 10392310  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgatt 192  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| ||||    
T  10392309 gattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttattaggatt 10392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 23115340 - 23115168
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  23115340 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa-tcattcaaatttggaaggattgtttaataaatcagattttgatg 23115242  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||    
T  23115241 gattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattg 23115168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 41479131 - 41479318
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||| |||||||||||||||||              
T  41479131 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaatgattgtttaataaatca---------- 41479220  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  41479221 gattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 41479318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 43959695 - 43959878
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    |||||||||||||| ||||||||||||       | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43959695 gtattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 43959794  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||          ||||||||||||||||||||||||||| || ||||||| ||||||||||||||||       |||||||||||||||||    
T  43959795 ttgtg----------gtgaaattttagcatgaaaaagtctttaattaaaacatgagatttcttatgattgtttttttcttttaagattttacta 43959878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 10295550 - 10295386
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga- 121  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||     
T  10295550 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 10295451  T
Q  122 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  10295450 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 10295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 14782304 - 14782141
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  14782304 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggat 14782205  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  14782204 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 14782141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 44725979 - 44725816
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  44725979 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggat 44725880  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  44725879 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 44725816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 20 - 186
Target Start/End: Complemental strand, 43166862 - 43166696
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||  ||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  43166862 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg 43166763  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||||||| | ||| ||||||| || |||||||| ||||||||||| || |||||||||    
T  43166762 gattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttctt 43166696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 9288591 - 9288463
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || ||||    
T  9288591 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaa 9288492  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||||||| || |||||||||    
T  9288491 aagtctttcatgaaaagatgagatttctt 9288463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 4403184 - 4403307
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  4403184 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtc 4403283  T
Q  163 tttcatgaaaacatcagatttctt 186  Q
    ||||||||||| || |||||||||    
T  4403284 tttcatgaaaatatgagatttctt 4403307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 23 - 183
Target Start/End: Complemental strand, 18958896 - 18958736
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||    
T  18958896 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttaatggat 18958797  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagattt 183  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || ||||||    
T  18958796 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagattagattt 18958736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 26856104 - 26856267
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  26856104 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagtattgtttaataaattggattttgatggat 26856203  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || ||||||||||||||  |||| || |||||||||    
T  26856204 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaataagatttctt 26856267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 19718050 - 19717887
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||| ||||||    
T  19718050 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaattggattttaatggat 19717951  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||||    
T  19717950 tttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttctt 19717887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 23 - 183
Target Start/End: Complemental strand, 39467637 - 39467477
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  39467637 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggat 39467538  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagattt 183  Q
    ||| ||||||||| ||||| ||||||| || |||||| ||||||||||||| || ||||||    
T  39467537 tttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagattt 39467477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 4950143 - 4950021
Alignment:
Q  65 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctt 164  Q
    ||||||||||||||||||| |||| || |||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | ||    
T  4950143 ggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaaaaatatt 4950044  T
Q  165 tcatgaaaacatcagatttctta 187  Q
    ||||| |||||| ||||||||||    
T  4950043 tcatgcaaacataagatttctta 4950021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 32711454 - 32711311
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  32711454 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttg-tg 32711356  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 175  Q
    ||             |||| ||||||||||||||||||||||||||||||||||||    
T  32711355 ga-----------aatctattgaaattttagcatgaaaaagtctttcatgaaaaca 32711311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 39189940 - 39189822
Alignment:
Q  66 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttt 165  Q
    |||||||| |||||||||||||||||||||||||||||||||  || ||||||||||||||  | |||||||||| |||||||| || |||||| |||||    
T  39189940 gtattcaacatcattcaaatttcgaaggattgtttaataaat-tgaatttgatggattttgatgaattttctagt-aaattttaacaagaaaaaatcttt 39189843  T
Q  166 catgaaaacatcagatttctt 186  Q
    ||||||||||| |||||||||    
T  39189842 catgaaaacatgagatttctt 39189822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 66 - 173
Target Start/End: Complemental strand, 13478376 - 13478269
Alignment:
Q  66 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttt 165  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||| | |||||||||| ||||||| |||  |||||||||||||| |||||||||    
T  13478376 gtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgataaagtcttt 13478277  T
Q  166 catgaaaa 173  Q
     |||||||    
T  13478276 tatgaaaa 13478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 18306130 - 18305977
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||| |||||||||||||||          |||||    
T  18306130 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaat----------tggat 18306041  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  18306040 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 18305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 32497562 - 32497715
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||          |||||    
T  32497562 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggat 32497651  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || || ||||||||||||||||| || |||||||||    
T  32497652 tttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttctt 32497715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 7466372 - 7466525
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || ||| |||       |||| ||||||||||||||||||||||||| |||| ||||||||||||||          |||||    
T  7466372 ggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaagaattgtttaataaat----------tggat 7466461  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  7466462 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 7466525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 8410526 - 8410416
Alignment:
Q  64 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggga--ttttctagtgaaattttagcatgaaaaagt 161  Q
    ||||||||||||||||| |||||| ||||||||||||| |||||  || |||||||||||||||||||  |||| |||||||||||||| |||| |||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggattttttttagtgaaattttagtatgacaaagt 8410427  T
Q  162 ctttcatgaaa 172  Q
    |||||| ||||    
T  8410426 ctttcacgaaa 8410416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 16362233 - 16362337
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || || ||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  16362233 ggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 16362332  T
Q  123 tttgt 127  Q
    |||||    
T  16362333 tttgt 16362337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 31623732 - 31623825
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 116  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  31623732 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 4031392 - 4031334
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  4031392 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 37857191 - 37857260
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 127  Q
    |||| |||||||||||| ||||||||||||  ||||||||||||||||||  ||||||||||||||||||    
T  37857191 gtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattggattttgatggattttgt 37857260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 42305914 - 42305850
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 127  Q
    |||||||||||||| |||||||||||||||||||||||||| |||  |||||| |||||||||||    
T  42305914 gtggtattcaaaataattcaaatttcgaaggattgtttaatcaattggattttaatggattttgt 42305850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 5e-78; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 6197650 - 6197453
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6197650 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 6197551  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  6197550 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 6197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 1391657 - 1391830
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1391657 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatg 1391756  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||    
T  1391757 gattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattg 1391830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 20 - 192
Target Start/End: Complemental strand, 2300910 - 2300738
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||||||||||||||||||||| |||||||       ||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  2300910 tgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaatcattcaaatttcgaaggattgtttaataaataagattttgatg 2300811  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgatt 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  2300810 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 2300738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 28002700 - 28002854
Alignment:
Q  22 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga 121  Q
    |||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28002700 tggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatgga 28002799  T
Q  122 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 176  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  28002800 ttttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 28002854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 29076631 - 29076805
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 118  Q
    |||||||||||||| ||| ||||||||||||        ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29076631 tgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 29076730  T
Q  119 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||| | ||||||||||||||||||||||||||||||| |||||||| ||||||| |||||| ||| |||||    
T  29076731 ggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagattttttaggattg 29076805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 29111644 - 29111779
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  29111644 gtctagtagtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaa 29111743  T
Q  158 aagtctttcatgaaaacatcagatttcttatgattg 193  Q
    || |||||||| ||||||| |||||| ||| |||||    
T  29111744 aaatctttcataaaaacatgagattttttaggattg 29111779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 31895733 - 31895895
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    |||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  31895733 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 31895832  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||||||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  31895833 ttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 31895895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 7051878 - 7052045
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||| |||||||||||||| |||||||       |||  ||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  7051878 tgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg 7051977  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctta 187  Q
    |||||||| |||||||||||| |||||||||||||||||||| |||||| ||| ||| ||||||||||    
T  7051978 gattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaaatcatgagatttctta 7052045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 34759218 - 34759056
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    |||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  34759218 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttccaaggattgtttaataaattggattttgatggatt 34759119  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||| ||||| ||||||| || |||||| ||||||||||||| || |||||||||    
T  34759118 ttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 34759056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 34773485 - 34773608
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||  |||| ||||||| || |||||||||    
T  34773485 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtc 34773584  T
Q  163 tttcatgaaaacatcagatttctt 186  Q
    ||||||||||| || |||||||||    
T  34773585 tttcatgaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 7497109 - 7497274
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  7497109 tgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattggattttgatg 7497208  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    |||||||| ||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  7497209 gattttgt-ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 7497274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 14262567 - 14262439
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  14262567 gtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 14262468  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||||||| ||  ||||||||    
T  14262467 aagtctttcatgaaaagatgggatttctt 14262439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 31067569 - 31067682
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||    
T  31067569 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31067658  T
Q  163 tttcatgaaaacatcagatttctt 186  Q
    |||||| |||| || |||||||||    
T  31067659 tttcataaaaagatgagatttctt 31067682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 30385191 - 30385075
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||| ||||| ||||||| ||  | |    
T  30385191 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaaca--aca 30385104  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||||||| || |||||||||    
T  30385103 aagtctttcatgaaaagatgagatttctt 30385075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 656998 - 657122
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||||||||| ||||||||||||||           ||||||||||| |||| |||||    
T  656998 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatcattcaaatt-----------tttaataaatctgattctgatg 657086  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaa 158  Q
    ||||||||||||||   ||||||||||||| ||||||||    
T  657087 gattttgtgggatt---tagtgaaattttatcatgaaaa 657122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 186
Target Start/End: Complemental strand, 4200541 - 4200443
Alignment:
Q  78 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatc 177  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| ||     
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 2238668 - 2238717
Alignment:
Q  144 attttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||| |||||||| |||||||||||||||| |||||||||| |||||    
T  2238668 attttagtatgaaaaaatctttcatgaaaacatgagatttcttaagattg 2238717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 3848286 - 3848330
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 107  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||    
T  3848286 gtggtattcaaaatcatttaaattttgaatgattgtttaataaat 3848330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 11113773 - 11113733
Alignment:
Q  152 atgaaaaagtctttcatgaaaacatcagatttcttatgatt 192  Q
    ||||||| ||||||||||||||||| |||||||||| ||||    
T  11113773 atgaaaacgtctttcatgaaaacatgagatttcttaggatt 11113733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 5e-78; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 3206378 - 3206181
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3206378 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 3206279  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||       |||||||||||||||||    
T  3206278 gattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagattttacta 3206181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 10139319 - 10139122
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10139319 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 10139220  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  10139219 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 10139122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 20498242 - 20498439
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20498242 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 20498341  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  20498342 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 20498439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 996259 - 996062
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  996259 tgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 996160  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  996159 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 996062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 19253860 - 19254033
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19253860 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatg 19253959  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  19253960 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 19254033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 33807972 - 33807798
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 118  Q
    |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807972 tgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 33807873  T
Q  119 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  33807872 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 33807798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 37820650 - 37820453
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37820650 tgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 37820551  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||       |||||||||||||||||    
T  37820550 gattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaagattgtttttttcttttaagattttacta 37820453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 3999818 - 3999645
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3999818 tgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 3999719  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||| |||||    
T  3999718 gattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacatgagatttcttaggattg 3999645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 6589597 - 6589770
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  6589597 tgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagaattatttaataaatcagattttgatg 6589696  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  6589697 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 6589770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 54625629 - 54625798
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  54625629 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggatt 54625728  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  54625729 ttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttcttaagattg 54625798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 29449031 - 29448858
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||| ||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29449031 tgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 29448932  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||| |||||    
T  29448931 gattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacatgagatttcttaggattg 29448858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 40246877 - 40247050
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||| ||||||| ||       |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40246877 tgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatg 40246976  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||    
T  40246977 gattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttatgattg 40247050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 35337768 - 35337963
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  35337768 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaatttcgaaggattgtttaataaatcagattttgatg 35337867  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||| |||||       |||||||||||||||||    
T  35337868 gattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgagattt-ttaggattgtttttttcttttaagattttacta 35337963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 33996714 - 33996547
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||        || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33996714 tgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 33996615  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctta 187  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  33996614 gattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatttctta 33996547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 44762206 - 44762037
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    |||||||||||||||||||||||||||       ||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  44762206 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcgaaggattgtttaataaatcagattttgatggatt 44762107  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||    
T  44762106 ttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaagattg 44762037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 25418399 - 25418572
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||| ||||||||||        ||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  25418399 tgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcattcaaatttgaaaggattgtttaataaatcagattttgatg 25418498  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| |||| |||||    
T  25418499 gattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgagattccttaggattg 25418572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 53929301 - 53929128
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||| ||||| ||||||||||||||| |||||||||||    
T  53929301 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatatcgaacgattgtttaataaataagattttgatg 53929202  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| ||| |||||    
T  53929201 gattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagattttttaggattg 53929128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 51699652 - 51699497
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  51699652 tgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattcaaatttcgaaggattggttaataaataagattttgatg 51699554  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 176  Q
     ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  51699553 aattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacat 51699497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 193
Target Start/End: Complemental strand, 6035223 - 6035053
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||| | || |||||||       |||| ||| |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  6035223 ggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagcaatgtttaataaattagattttgatggat 6035124  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  6035123 tttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaagattg 6035053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 52114561 - 52114734
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 118  Q
    |||||||||||||||||||| ||||||||||        ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  52114561 tgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgat 52114660  T
Q  119 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgatt 192  Q
     |||||||||| |||||||||| |||||||||||||||||| |||||  ||||||||| |||||||||| ||||    
T  52114661 agattttgtggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaacatgagatttcttaggatt 52114734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 64 - 193
Target Start/End: Original strand, 5825139 - 5825268
Alignment:
Q  64 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 163  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  164 ttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||| ||||||||||||||||    
T  5825239 ttcatgaaaacatgagatttcttatgattg 5825268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 40897180 - 40897343
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       ||||  ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  40897180 ggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 40897279  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  40897280 tttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 40897343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 22057795 - 22057933
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||| |||||||||||| |||||||        |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22057795 tgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatttaaaatcattcaaatttcgatggattgtttaataaatcagattttgatg 22057894  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaa 158  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  22057895 gattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 18749683 - 18749811
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  18749683 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 18749782  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||||||| || |||||||||    
T  18749783 aagtctttcatgaaaagatgagatttctt 18749811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 29030039 - 29030203
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29030039 tgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatg 29030137  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttct 185  Q
    |||||||||| |||||||| |||||||||| ||||||    | ||| |||||||||| ||||||||    
T  29030138 gattttgtggaattttctaatgaaattttaacatgaattttttttttatgaaaacatgagatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 1440125 - 1440006
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1440125 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcagattttgatg 1440026  T
Q  120 gattttgtgggattttctag 139  Q
    |||||| |||||||||||||    
T  1440025 gattttatgggattttctag 1440006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 17946324 - 17946487
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  17946324 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggat 17946423  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  17946424 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 17946487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 36674300 - 36674137
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  36674300 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggat 36674201  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  36674200 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 36674137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 44906683 - 44906520
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||    
T  44906683 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaat 44906584  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || ||||| |||||||||||||| || |||||||||    
T  44906583 tttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgagatttctt 44906520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 32580247 - 32580375
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||| ||||| ||||||| || ||||    
T  32580247 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaa 32580346  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||||||| || |||||||||    
T  32580347 aagtctttcatgaaaagatgagatttctt 32580375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 22 - 193
Target Start/End: Original strand, 27899379 - 27899540
Alignment:
Q  22 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga 121  Q
    |||||||||||||||||||||  ||| ||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  27899379 tggtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg----- 27899473  T
Q  122 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
         | |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  27899474 -----taggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttatgattg 27899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 34484160 - 34484037
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||| ||    
T  34484160 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatc 34484061  T
Q  163 tttcatgaaaacatcagatttctt 186  Q
    ||||||||||| || |||||||||    
T  34484060 tttcatgaaaagatgagatttctt 34484037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 11431562 - 11431725
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||||||||||||||||||||||  ||||||| |||||    
T  11431562 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttggtggat 11431661  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  11431662 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 11431725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 48379193 - 48379356
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||| ||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  48379193 ggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggat 48379292  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| |||||||  | ||||| |||||||||||||| ||||||||||||    
T  48379293 tttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagatttctt 48379356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 23 - 173
Target Start/End: Complemental strand, 51737896 - 51737746
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  51737896 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 51737797  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 173  Q
    ||||||||||||| | ||| ||||||| || ||||||||||||||| ||||    
T  51737796 tttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaa 51737746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 54628920 - 54629043
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  54628920 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 54629019  T
Q  163 tttcatgaaaacatcagatttctt 186  Q
    |||||| |||| || |||||||||    
T  54629020 tttcataaaaagatgagatttctt 54629043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 26107297 - 26107460
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  26107297 ggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 26107396  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    |||||| |||||| ||||| ||||||| || |||||||| |||||| |||| || |||||||||    
T  26107397 tttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttctt 26107460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 6131321 - 6131233
Alignment:
Q  105 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  6131321 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 6131233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 31646414 - 31646304
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  31646414 gtggtattcaaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31646315  T
Q  163 tttcatgaaaa 173  Q
    |||||||||||    
T  31646314 tttcatgaaaa 31646304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 23 - 149
Target Start/End: Complemental strand, 52618135 - 52618009
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  52618135 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 52618036  T
Q  123 tttgtgggattttctagtgaaatttta 149  Q
    ||||||||||||| ||||| |||||||    
T  52618035 tttgtgggattttgtagtgtaatttta 52618009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 50903375 - 50903247
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  50903375 gtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 50903276  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    || ||||| ||||||| || |||||||||    
T  50903275 aaatcttttatgaaaatatgagatttctt 50903247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 52810414 - 52810577
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||| ||| |||||||||||||||   ||||||||||||    
T  52810414 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaatgattgtttaataaattgaattttgatggat 52810513  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||| | ||||||| || |||||| ||||||||||||| || |||||||||    
T  52810514 tttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 52810577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 193
Target Start/End: Complemental strand, 1440005 - 1439894
Alignment:
Q  82 aaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagat 181  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||||| |||||||| ||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  182 ttcttatgattg 193  Q
    || ||| |||||    
T  1439905 tttttaggattg 1439894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 20833028 - 20833187
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||| | || |||||||       |||| ||||||||||||||||||||||||  |||||||||||||||||||  |||||||||||||    
T  20833028 ggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattcggaaggattgtttaataaattggattttgatggat 20833127  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatt 182  Q
    |||||| |||||  ||||| ||||||| || |||||||| ||||||||||| || |||||    
T  20833128 tttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 67 - 161
Target Start/End: Original strand, 55235264 - 55235359
Alignment:
Q  67 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga-ttttgtgggattttctagtgaaattttagcatgaaaaagt 161  Q
    ||||||||||||||||||||||||| |||||||||||||||  | |||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  55235264 tattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaattttagcataaaaaagt 55235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 52079999 - 52080117
Alignment:
Q  59 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaa 158  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||          ||||||||||||||||||| |||||||||||||||||||    
T  52079999 tctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatca----------gattttgtgggattttctaatgaaattttagcatgaaaa 52080088  T
Q  159 agtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||      ||||||||| |||||||||| |||||    
T  52080089 agt------tgaaaacatgagatttcttaggattg 52080117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 10728811 - 10728658
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||| |||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  10728811 ggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaatttggaaggattgtttaataaattggattttgatggat 10728712  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||          ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  10728711 tttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 10728658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 10660611 - 10660675
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  10660611 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 10660675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 39038076 - 39038229
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| ||||||| |||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  39038076 ggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaatcattcaaatttcgaagaattgtttaataaattggattttgatggat 39038175  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    |||||          |||| ||||||| || ||||||||||||||| |||| || |||||||||    
T  39038176 tttgt----------agtgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 39038229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 37454932 - 37455050
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||          || ||||||||||||||| ||||| ||||||| || ||||    
T  37454932 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tgaattttgtgggattttgtagtgtaattttaacaagaaa 37455021  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    |||| ||||||||||| || |||||||||    
T  37455022 aagtatttcatgaaaagatgagatttctt 37455050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 6975817 - 6975924
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||||||||||||||||||||||||| ||| |||| |||||          |||| |||||||||||||||||| |||||| |||||||||    
T  6975817 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttactaaat----------tggaatttgtgggattttctagtaaaatttgagcatgaaa 6975906  T
Q  158 aagtctttcatgaaaaca 175  Q
     |||||||||||||||||    
T  6975907 cagtctttcatgaaaaca 6975924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 39842619 - 39842550
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 127  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgt 39842550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 50762185 - 50762067
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| ||||||||||||||||||| ||||||||| |||||||| ||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  50762185 gtcttgtggtattcaaaatcattctaatttcgaatgattgtttgataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 50762096  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||||||| || |||||||||    
T  50762095 aagtctttcatgaaaagatgagatttctt 50762067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 23753556 - 23753463
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 116  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  23753556 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 539539 - 539476
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga 121  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  539539 gtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 183
Target Start/End: Original strand, 44276466 - 44276571
Alignment:
Q  64 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 163  Q
    |||||||||||||||||||||||    |||||||||||||||||          |||||||||||||||||||||||||||||||| || |||||| |||    
T  44276466 tggtattcaaaatcattcaaatt----aggattgtttaataaat----------tggattttgtgggattttctagtgaaattttaacaagaaaaaatct 44276551  T
Q  164 ttcatgaaaacatcagattt 183  Q
    |||||||| |||| ||||||    
T  44276552 ttcatgaagacatgagattt 44276571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 33807733 - 33807680
Alignment:
Q  140 tgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  33807733 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 33807680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 23535983 - 23535890
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 114  Q
    ||||| |||||||||| |||||| |||||||       |||| ||||||||||||||||||||||||| ||||||| ||||||| ||| ||||||    
T  23535983 tgtggcattcaatcaa-actcttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 15492942 - 15492874
Alignment:
Q  118 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||| |||| |||||||||||||||| || |||||| |||||||||||  ||| |||||||||    
T  15492942 tggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttctt 15492874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 45862983 - 45863040
Alignment:
Q  129 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 45863040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 12103733 - 12103779
Alignment:
Q  130 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 176  Q
    |||||||||||||||||||| || ||| |||||||||||||| ||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaagacat 12103779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 3e-76; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 21147101 - 21147274
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21147101 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 21147200  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  21147201 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 21147274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 7016907 - 7016714
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7016907 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 7016808  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||||       |||||||||||||||||    
T  7016807 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttagaattgtttttttcttttaagattttacta 7016714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 33656213 - 33656040
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33656213 tgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 33656114  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||    
T  33656113 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattg 33656040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 5273089 - 5272924
Alignment:
Q  22 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga 121  Q
    |||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5273089 tggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatgga 5272990  T
Q  122 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctta 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  5272989 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttctta 5272924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 849181 - 849334
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  849181 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgata 849280  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  849281 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 139307 - 139474
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  139307 tgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaaccagattttgatg 139406  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctta 187  Q
    |||||||| |||||||| ||||||||||||  ||||||||||||||||| ||||||| ||||||||||    
T  139407 gattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatttctta 139474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 27459117 - 27458925
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  27459117 gtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattcaaaatcattcagattttgaaggattgtttaataaattagattttgatggatt 27459019  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||| | |||||||| |||||       |||||||||||||||||    
T  27459018 ttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacatgatatttcttaggattgtttttttcttttaagattttacta 27458925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 32158070 - 32157869
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 118  Q
    ||||||||||||||||||| | |||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  32158070 tgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgac 32157971  T
Q  119 ggattttgtgggattttctagtgaaattttagcatgaaaa---agtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttac 215  Q
    |||||||||||||||||||||| ||||||||||| |||||   |||||||||||||||||| ||||||||||  ||||       |||||||||||||||    
T  32157970 ggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaaacatgagatttcttaaaattgttcttttcttttaagattttac 32157871  T
Q  216 ta 217  Q
    ||    
T  32157870 ta 32157869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 6460830 - 6460965
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    |||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6460830 gtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaaggtttgtttaataaatcagattttgatggatt 6460929  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaaa 159  Q
    ||| |||||||||||||||||||||| |||||||||    
T  6460930 ttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 23 - 193
Target Start/End: Complemental strand, 1152272 - 1152102
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  1152272 ggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgagggattgtttaataaattggattttgatggat 1152173  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||||| |||||    
T  1152172 tttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttcttaagattg 1152102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 14000274 - 14000111
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  14000274 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggat 14000175  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  14000174 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 14000111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 23 - 183
Target Start/End: Complemental strand, 4550426 - 4550266
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  4550426 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 4550327  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagattt 183  Q
    ||||||| ||||| ||||| ||||||| || |||| ||||||||||||||| || ||||||    
T  4550326 tttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgagattt 4550266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 9689693 - 9689864
Alignment:
Q  21 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgg 120  Q
    |||||||||||||||||||||| |||||||       |||| |||||||| ||||||||| |||||||||| |||||||| |||||| ||||||||||||    
T  9689693 gtggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttgatgg 9689791  T
Q  121 attttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||| |||| |||||||| || ||||||||  ||||||||||||||||| ||||||| ||||||||||||||||    
T  9689792 attgtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacataagatttcttatgattg 9689864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 13926003 - 13926131
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  13926003 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 13926102  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||| ||||| || | |||||||    
T  13926103 aagtctttcaagaaaagatgatatttctt 13926131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 39852417 - 39852545
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||| ||||||||| ||||| ||||||| || ||||    
T  39852417 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaa 39852516  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||||||| || |||||||||    
T  39852517 aagtctttcatgaaaagatgagatttctt 39852545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 7947742 - 7947579
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| | | |||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  7947742 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 7947643  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||| ||||| ||||| ||||||| || |||||||||||||||||||| |  |||||||||    
T  7947642 tttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttctt 7947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 14465397 - 14465266
Alignment:
Q  22 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga 121  Q
    ||||||||||||||||||||| ||| |||       |||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |    
T  14465397 tggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcggattttgatgaa 14465298  T
Q  122 ttttgtgggattttctagtgaaattttagcat 153  Q
    |||||||| |||||||||| | ||||||||||    
T  14465297 ttttgtggaattttctagtaatattttagcat 14465266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 4240621 - 4240517
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  4240621 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 4240522  T
Q  123 tttgt 127  Q
    |||||    
T  4240521 tttgt 4240517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 5949185 - 5949298
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||    
T  5949185 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtc 5949274  T
Q  163 tttcatgaaaacatcagatttctt 186  Q
    ||||||||||| || |||||||||    
T  5949275 tttcatgaaaagatgagatttctt 5949298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 22746334 - 22746496
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||| ||| || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||   ||||||||||||    
T  22746334 ggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggat 22746433  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||        || ||||||| || |||||| ||||||||||||| || |||||||||| |||||    
T  22746434 tttgtggga--------tgtaattttaacaagaaaaactctttcatgaaaagataagatttcttaagattg 22746496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 1461307 - 1461203
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| | | |||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  1461307 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 1461208  T
Q  123 tttgt 127  Q
    |||||    
T  1461207 tttgt 1461203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 67 - 186
Target Start/End: Complemental strand, 40013827 - 40013718
Alignment:
Q  67 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 166  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||||| ||||||||||          ||||| ||||||| || |||||||||||||    
T  40013827 tattcaaaatcattcaaatttcgaaggattgtttaatcaattggattttaatggattttg----------tagtgtaattttaacaagaaaaagtctttc 40013738  T
Q  167 atgaaaacatcagatttctt 186  Q
    ||||||| || |||||||||    
T  40013737 atgaaaagatgagatttctt 40013718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 9220879 - 9220716
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||| |||||||||||||||||| |||||||       ||||  || |||||||||||||||||||||| |||||||||||||| ||| ||| ||||       
T  9220879 tgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaatttctaaggattgtttaatgaattagaatttg--- 9220783  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
           | ||||||| |||| |||||||| || ||||||||||||| ||||||||| | |||||||| |||||    
T  9220782 -------taggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttcttaggattg 9220716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 37013951 - 37014044
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 116  Q
    ||||||||||||||||| || |||||||       |||| | ||||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  37013951 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatcattcaaatttcgaagggttgtttaataaattggattttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 16894074 - 16894044
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcactt 50  Q
    |||||||||||||||||||||||||||||||    
T  16894074 tgtggtattcaatcaagactcttaatcactt 16894044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 3e-76; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 24776390 - 24776563
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776390 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 24776489  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  24776490 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 24776563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 16269726 - 16269923
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16269726 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 16269825  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  16269826 gattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 16269923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 20605271 - 20605468
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20605271 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagattttgatg 20605370  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  20605371 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 20605468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 31170799 - 31170602
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31170799 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcagattttgatg 31170700  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  31170699 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 31170602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 14198752 - 14198555
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14198752 tgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 14198653  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  14198652 gattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 14198555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 12407415 - 12407612
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12407415 tgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatg 12407514  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  12407515 gattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 12407612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 25 - 217
Target Start/End: Original strand, 35317102 - 35317294
Alignment:
Q  25 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattt 124  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35317102 tattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattt 35317201  T
Q  125 tgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||       |||||||||||||||||    
T  35317202 tgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaacattgtttttttcttttaagattttacta 35317294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 43847681 - 43847878
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  43847681 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaatcattcaaatttcgaaggattgtttaataaatcagaatttgatg 43847780  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||       |||||||||||||||||    
T  43847781 gattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 43847878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 305640 - 305443
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||    
T  305640 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaatgattgtttaataaatcagatttcgatg 305541  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  305540 gattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttatttcttttaagattttacta 305443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 5093222 - 5093049
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||||||||||||||||| |||||||||||       ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5093222 tgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatg 5093123  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  5093122 gattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattg 5093049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 22551938 - 22551741
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||| ||||||||||       ||||||||||||||||||| |||||||||||||| ||||||||| ||||| | |||||||||    
T  22551938 tgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaatgattgtttattaaattaaattttgatg 22551839  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||       |||||||||||||||||    
T  22551838 gattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttatgattgttttttccttttaagattttacta 22551741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 25 - 173
Target Start/End: Original strand, 1789482 - 1789630
Alignment:
Q  25 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattt 124  Q
    ||||||||||| ||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1789482 tattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattt 1789581  T
Q  125 tgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  1789582 tgtgggattttctaatgaaattttagcatgaaaaagtctttcatcaaaa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 32125285 - 32125455
Alignment:
Q  20 tgtggtattcaatcaagactcttaat---cacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 116  Q
    ||||||||||||||||||||||||||   || ||       ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32125285 tgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 32125384  T
Q  117 atggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctta 187  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||    
T  32125385 atggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgagatttctta 32125455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 9120161 - 9120358
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||| ||||||||||||| ||||||||||||        ||||||| |||||||||||||||| ||||  |||||||||||||||||| |||||||||||    
T  9120161 tgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagattttaaaggattgtttaataaattagattttgatg 9120260  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  9120261 gattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 9120358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 20 - 153
Target Start/End: Original strand, 44765810 - 44765943
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  44765810 tgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaataagattttgatg 44765909  T
Q  120 gattttgtgggattttctagtgaaattttagcat 153  Q
    ||||||||||||||||||||||||||||||||||    
T  44765910 gattttgtgggattttctagtgaaattttagcat 44765943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 28844593 - 28844756
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28844593 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggat 28844692  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||| ||||| ||||| |||||||  | ||||||||||||||| |||| || |||||||||    
T  28844693 tttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgagatttctt 28844756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 33135661 - 33135823
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  33135661 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 33135760  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || ||||||||||||||| |||| || |||||||||    
T  33135761 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaaatgagatttctt 33135823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 10657444 - 10657607
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  10657444 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggat 10657543  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||| ||||||||||| || | |||||||    
T  10657544 tttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaaatttctt 10657607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 18177345 - 18177468
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  18177345 gtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 18177444  T
Q  163 tttcatgaaaacatcagatttctt 186  Q
    ||| || |||| || |||||||||    
T  18177445 tttaataaaaagatgagatttctt 18177468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 25288237 - 25288360
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || || || |||    
T  25288237 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtc 25288336  T
Q  163 tttcatgaaaacatcagatttctt 186  Q
    ||||||||||| || |||||||||    
T  25288337 tttcatgaaaagatgagatttctt 25288360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 58 - 168
Target Start/End: Original strand, 26788859 - 26788969
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  26788859 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 26788958  T
Q  158 aagtctttcat 168  Q
    |||||||||||    
T  26788959 aagtctttcat 26788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 75 - 186
Target Start/End: Original strand, 43078653 - 43078764
Alignment:
Q  75 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 174  Q
    ||||||||||||||||| |||||||||||||||  |||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||||| ||||     
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  175 atcagatttctt 186  Q
    || |||||||||    
T  43078753 ataagatttctt 43078764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 28740455 - 28740349
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  28740455 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 28740356  T
Q  123 tttgtgg 129  Q
    |||||||    
T  28740355 tttgtgg 28740349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 7026642 - 7026746
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  7026642 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 7026741  T
Q  123 tttgt 127  Q
    |||||    
T  7026742 tttgt 7026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 13833592 - 13833441
Alignment:
Q  25 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattt 124  Q
    ||||||||||||||| || |||||||       ||||  |||||||||||||||||||||||| |||||||||||||||||||          |||||||    
T  13833592 tattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattt 13833503  T
Q  125 tgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||| ||||| ||||||| || ||||||||||||||||| || || |||||||||    
T  13833502 tgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgagatttctt 13833441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 26601371 - 26601270
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    |||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||| | ||||||||||||||||||||||  |||||    
T  26601371 gtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaatcattcaaatttcgaatgtttgtttaataaatcagattttgtgggatt 26601272  T
Q  124 tt 125  Q
    ||    
T  26601271 tt 26601270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 67 - 193
Target Start/End: Complemental strand, 10125418 - 10125302
Alignment:
Q  67 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 166  Q
    |||||||||||||||||||||| ||||||||||||||||||          || ||||||||||||||| ||||||||||||| || |||||||||||||    
T  10125418 tattcaaaatcattcaaatttcaaaggattgtttaataaat----------tgaattttgtgggattttttagtgaaattttaacaagaaaaagtctttc 10125329  T
Q  167 atgaaaacatcagatttcttatgattg 193  Q
    || ||||||  |||||||||| |||||    
T  10125328 ataaaaacacgagatttcttaagattg 10125302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 3463745 - 3463863
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||| |||||||||||| |||| ||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  3463745 gtcttgtggtatttaaaatcattcaattttcaaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 3463834  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||||||| || |||||||||    
T  3463835 aagtctttcatgaaaatatgagatttctt 3463863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 3574885 - 3574978
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 116  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  3574885 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 379016 - 379079
Alignment:
Q  64 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 127  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||    
T  379016 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgt 379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 6224684 - 6224626
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 116  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||||||||  |||||||    
T  6224684 gtcttgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 215397 - 215320
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgttt 100  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||| ||| |||||||||||    
T  215397 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaacttcaaaggattgttt 215320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 6224633 - 6224576
Alignment:
Q  129 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  6224633 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6224576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 21370687 - 21370638
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 107  Q
    |||| ||||||||||||||||||||||||| |||| ||||||| ||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaat 21370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 1e-75; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 19451981 - 19451784
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||||||| |||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19451981 tgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatg 19451882  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       |||||||||||||||||    
T  19451881 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagattttacta 19451784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 21222174 - 21222371
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21222174 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatg 21222273  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  21222274 gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttattttcttttaagattttacta 21222371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 45760182 - 45759985
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45760182 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaacttcgaaggattgtttaataaatcagattttgatg 45760083  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||| |||||       |||||||||||||||||    
T  45760082 gattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 45759985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 50192724 - 50192526
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 118  Q
    |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  50192724 tgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgat 50192625  T
Q  119 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||       |||||||||||||||||    
T  50192624 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattttttaggattgtttttttcttttaagattttacta 50192526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 6304426 - 6304252
Alignment:
Q  20 tgtggtattcaatcaaga-ctcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 118  Q
    |||||||||||| ||| | |||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6304426 tgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 6304327  T
Q  119 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  6304326 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttatgattg 6304252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 49198441 - 49198245
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||||||||||| |||||||||||||||||       ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49198441 tgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 49198343  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||       |||||||||||||||||    
T  49198342 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaggattgtttttttcttttaagattttacta 49198245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 35279699 - 35279866
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||| ||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35279699 tgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatg 35279798  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctta 187  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  35279799 gattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgagatttctta 35279866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 45535971 - 45536125
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45535971 tgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatg 45536070  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45536071 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 45536125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 47780738 - 47780935
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  47780738 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaattaaaaggattgtttaataaatcagattttgatg 47780837  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  47780838 gattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 47780935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 49418111 - 49418278
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49418111 tgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatg 49418210  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctta 187  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||| || ||||||||||    
T  49418211 gattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgagatttctta 49418278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 35679297 - 35679128
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    |||||||||||||||||||||||||||       |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35679297 gtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 35679198  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  35679197 tgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacatgagatttcttaagattg 35679128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 47654525 - 47654327
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 118  Q
    |||||||||||||||| ||||||||||||||        ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47654525 tgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgat 47654426  T
Q  119 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  47654425 ggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 47654327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 28824545 - 28824349
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28824545 tgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaatcattcaaatttcgaag-attgtttaataaatcagattttgatg 28824447  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| || ||||||| |||||||||| |||||       |||||||||||||||||    
T  28824446 gattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgagatttcttaggattgtttttttcttttaagattttacta 28824349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 32589126 - 32588963
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||| ||||||||||||||||| |||||||       |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  32589126 tgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttgatg 32589027  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagattt 183  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  32589026 gattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 63 - 187
Target Start/End: Complemental strand, 31572327 - 31572203
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  31572327 gtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaagtc 31572228  T
Q  163 tttcatgaaaacatcagatttctta 187  Q
    |||||||||| ||| ||||||||||    
T  31572227 tttcatgaaatcatgagatttctta 31572203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 29556131 - 29556305
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||| ||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  29556131 tgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaaagattgtttaataaattagattttgatg 29556230  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa-acatcagatttcttatgattg 193  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||| |||||| |||| |||||||||| |||||    
T  29556231 gattttatgggattttctaatgaaattttagcttgaaaaagtcttttatgaaacacatgagatttcttaggattg 29556305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 730175 - 730314
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 118  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  730175 tgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgacgaattgtttaataaatcagattttgat 730274  T
Q  119 ggattttgtgggattttctagtgaaattttagcatgaaaa 158  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  730275 ggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 6312604 - 6312767
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  6312604 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 6312703  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  6312704 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6312767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 29396558 - 29396395
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  29396558 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 29396459  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  29396458 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 29396395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 9577567 - 9577439
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  9577567 gtcttgtgatattcaaaatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaa 9577468  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    || |||||||||||||||| |||||||||    
T  9577467 aaatctttcatgaaaacatgagatttctt 9577439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 48524346 - 48524490
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||||||| |||||| ||||||||||||||       |||| ||| ||||||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  48524346 tgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaatcattcaaattttgaaagattgtttaataaatcagtttttgatg 48524445  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctt 164  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  48524446 gattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 51701610 - 51701770
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  51701610 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 51701709  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagattt 183  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || ||||||    
T  51701710 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 51701770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 46328072 - 46328234
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  46328072 ggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggat 46328171  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttct 185  Q
    ||||||||||||| ||||| ||||||| || ||||||||||||||| |||| || ||||||||    
T  46328172 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagataagatttct 46328234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 37014813 - 37014640
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||| | |||| |||||||       |||| ||| |||||||||||||||||||||| || |||||||| ||||||   |||||||||    
T  37014813 tgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttctaaagattgttttataaattgaattttgatg 37014714  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||| |||||    
T  37014713 gattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacatgagatttcttaagattg 37014640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 48177597 - 48177469
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  48177597 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48177498  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||||||| || |||||||||    
T  48177497 aagtctttcatgaaaagatgagatttctt 48177469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 25612222 - 25612350
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| || ||||    
T  25612222 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaa 25612321  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||||||| || |||||||||    
T  25612322 aagtctttcatgaaaagatgagatttctt 25612350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 33025539 - 33025703
Alignment:
Q  20 tgtggtattcaatcaaga-ctcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 118  Q
    |||||||||||||||| | |||||||||||||       |||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||         
T  33025539 tgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaatacatcagatt----- 33025633  T
Q  119 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
         ||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33025634 -----ttgtgggattttctaataaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 33025703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 9322630 - 9322507
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||   ||||||||||||||| ||||||||| ||||| ||||||| || |||||||||    
T  9322630 gtggtattcaaaatcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 9322531  T
Q  163 tttcatgaaaacatcagatttctt 186  Q
    ||||||||||| || |||||||||    
T  9322530 tttcatgaaaagatgagatttctt 9322507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 15835183 - 15835060
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    |||||||||||||||||||||||| | ||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||||| || |||||||||    
T  15835183 gtggtattcaaaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 15835084  T
Q  163 tttcatgaaaacatcagatttctt 186  Q
    ||||||||||| || |||||||||    
T  15835083 tttcatgaaaagatgagatttctt 15835060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 28387523 - 28387400
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| ||  ||||||||    
T  28387523 gtggtattcaaattcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtc 28387424  T
Q  163 tttcatgaaaacatcagatttctt 186  Q
    |||||| |||| || |||||||||    
T  28387423 tttcataaaaagatgagatttctt 28387400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  66 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 125  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 38536259 - 38536106
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || || ||||       |||| |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||    
T  38536259 ggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggat 38536160  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||          ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  38536159 tttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 38536106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 38558477 - 38558324
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || || ||||       |||| |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||    
T  38558477 ggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggat 38558378  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||          ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  38558377 tttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 38558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 29219318 - 29219469
Alignment:
Q  25 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattt 124  Q
    ||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||  |||||||||||||||||||  |||||||||||||||    
T  29219318 tattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattt 29219417  T
Q  125 tgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    |||          |||| ||||||| || |||||||| ||||||||||| || |||||||||    
T  29219418 tgt----------agtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttctt 29219469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 51085860 - 51085951
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 149  Q
    |||| |||||||||||||| |||||||||| |||||||| || |||||||  |||||||||| ||||||||| ||||||| |||||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaatttta 51085951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 183
Target Start/End: Complemental strand, 48668905 - 48668795
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    |||||||||||||| |||||||||||||| |||||||||||||||          |||||||||||||||| | ||||| ||||||| || |||||||||    
T  48668905 gtggtattcaaaattattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattctgtagtgtaattttaacaagaaaaagtc 48668816  T
Q  163 tttcatgaaaacatcagattt 183  Q
    ||||||||||| || ||||||    
T  48668815 tttcatgaaaagatgagattt 48668795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 18798521 - 18798614
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 116  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  18798521 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 182
Target Start/End: Complemental strand, 5495266 - 5495117
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||| ||||||| ||||||| ||||||||||          |||||    
T  5495266 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaatttcaaaggattatttaataaat----------tggat 5495177  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatt 182  Q
    ||||||||||||| ||||| ||||||| || ||||||||| || ||||||| || |||||    
T  5495176 tttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 49230916 - 49231000
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 107  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  49230916 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaat 49231000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 47784414 - 47784542
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||  ||| ||       |||| |||||||||||||| ||||||| ||| || |||||||||||||||          ||    
T  47784414 tgtggtattcaatcaagactctttgtca-tttaaaaaagtcttgtggtattcaaaattattcaaacttctaaagattgtttaataaat----------tg 47784502  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaa 159  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  47784503 gattttgtgagattttctagttaaattttagcatgaaaaa 47784542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 31622586 - 31622536
Alignment:
Q  66 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 116  Q
    ||||||||||||||||||||||| || |||||||||||||||| |||||||    
T  31622586 gtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 22183397 - 22183457
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcatt 80  Q
    |||||||||||||||||| ||||||||||||       |||||||||||||||||||||||    
T  22183397 tgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 173
Target Start/End: Original strand, 38319996 - 38320086
Alignment:
Q  83 aatttcgaaggattgtttaataaatcagattttgatggattttgt-gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 173  Q
    ||||| ||| ||||||||| |||||  ||||||||| |||||||| ||| |||| ||||||| ||||||||  |||||||||||||||||||    
T  38319996 aattttgaatgattgtttactaaataggattttgatagattttgttgggtttttttagtgaa-ttttagcacaaaaaagtctttcatgaaaa 38320086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 45272616 - 45272708
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 116  Q
    ||||||||||||||||| || |||||||        ||| |||||||||||||| ||| ||||||||||||| ||||||||||||  |||||||    
T  45272616 ggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaaaattatttaaatttcgaagga-tgtttaataaattggattttg 45272708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 157
Target Start/End: Original strand, 955876 - 955904
Alignment:
Q  129 ggattttctagtgaaattttagcatgaaa 157  Q
    |||||||||||||||||||||||||||||    
T  955876 ggattttctagtgaaattttagcatgaaa 955904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 18798615 - 18798663
Alignment:
Q  137 tagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttct 185  Q
    ||||| ||||||| || |||||||||||||||||||| || ||||||||    
T  18798615 tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 18798663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 7e-74; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 7718534 - 7718361
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7718534 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 7718435  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  7718434 gattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattg 7718361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 18914907 - 18914710
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  18914907 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggtttgtttaataaatcagattttgatg 18914808  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  18914807 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 18914710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 30440831 - 30441028
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30440831 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 30440930  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||| |||||       |||||||||||||||||    
T  30440931 gattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 30441028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 34695308 - 34695505
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34695308 tgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgatg 34695407  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  34695408 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 34695505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 40996821 - 40996624
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40996821 tgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 40996722  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  40996721 gattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 40996624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 24 - 192
Target Start/End: Complemental strand, 43581258 - 43581090
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43581258 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 43581159  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgatt 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  43581158 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 43581090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 47914301 - 47914498
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47914301 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatg 47914400  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  47914401 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 47914498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 7719432 - 7719259
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7719432 tgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatg 7719333  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  7719332 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 7719259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 973219 - 973416
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||        | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  973219 tgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 973318  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  973319 gattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 973416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 47879203 - 47879400
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  47879203 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttaaaaggattgtttaataaatcagattttgatg 47879302  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  47879303 gattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 47879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 12893443 - 12893616
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||||||| |||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12893443 tgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatg 12893542  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  12893543 gattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 12893616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 44343568 - 44343395
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||| ||||||||||||||||||||||||||       || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44343568 tgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 44343469  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||    
T  44343468 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatgagatttcttaggattg 44343395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 20275433 - 20275238
Alignment:
Q  22 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga 121  Q
    |||||||||||||||||||||||||||||       ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20275433 tggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga 20275334  T
Q  122 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||| ||||||||||  ||||       |||||||||||||||||    
T  20275333 ttttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgagatttcttagcattgtttttttcttttaagattttacta 20275238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 39219548 - 39219352
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||| ||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  39219548 tgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaattttgatg-attgtttaataaatcagattttgatg 39219450  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||       |||||||||||||||||    
T  39219449 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagattttacta 39219352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 34009047 - 34009245
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtc-tagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 118  Q
    |||||||||||||||| ||||||||||||||       ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34009047 tgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 34009146  T
Q  119 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||| |||||||| | |||||||||||| ||||||||||||| |||||||| |||||||||| |||||       |||||||||||||||||    
T  34009147 ggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaaacatgagatttcttaggattgtttttttcttttaagattttacta 34009245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 32143046 - 32142916
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32143046 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 32142947  T
Q  163 tttcatgaaaacatcagatttcttatgattg 193  Q
    || ||| ||||||| |||||||||| |||||    
T  32142946 ttccataaaaacatgagatttcttaagattg 32142916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 10068498 - 10068668
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||| | || |||||||       |||| ||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  10068498 ggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattaaattttgatggat 10068597  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| ||| |||||    
T  10068598 tttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaaacatgagatttgttaggattg 10068668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 43679491 - 43679592
Alignment:
Q  62 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43679491 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 43679590  T
Q  162 ct 163  Q
    ||    
T  43679591 ct 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 62 - 193
Target Start/End: Original strand, 7113529 - 7113660
Alignment:
Q  62 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 161  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  7113529 agtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagt 7113628  T
Q  162 ctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||| | |||||||| |||||    
T  7113629 ctttcatgaaaacatgaaatttcttaggattg 7113660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 23101329 - 23101492
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  23101329 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 23101428  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  23101429 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 23101492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 28342413 - 28342541
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  28342413 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 28342512  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||||||| || |||||||||    
T  28342513 aagtctttcatgaaaagatgagatttctt 28342541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 3022957 - 3023120
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  3022957 ggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 3023056  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||| ||||||||||| || |||||||||    
T  3023057 tttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttctt 3023120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 29614933 - 29614770
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  29614933 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 29614834  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  29614833 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 29614770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 39784130 - 39784293
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  39784130 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggat 39784229  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  39784230 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 39784293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 58 - 165
Target Start/End: Original strand, 12963767 - 12963874
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||    
T  12963767 gtctcgtggtatccaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaa 12963866  T
Q  158 aagtcttt 165  Q
    ||||||||    
T  12963867 aagtcttt 12963874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 18838420 - 18838583
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || ||| |||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  18838420 ggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggat 18838519  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||| ||||||||||| || |||||||||    
T  18838520 tttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttctt 18838583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 28034972 - 28034811
Alignment:
Q  25 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattt 124  Q
    ||||||||||||||| || |||||||       |||| |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||    
T  28034972 tattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattt 28034873  T
Q  125 tgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||| ||||| ||||||| ||  ||||||||||||||||||| || |||||||||    
T  28034872 tgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagatttctt 28034811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 33382668 - 33382828
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       ||||  ||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  33382668 ggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggat 33382767  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagattt 183  Q
    ||||||||||||| ||||| ||||||| || |||||||||||| ||||||| || ||||||    
T  33382768 tttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagattt 33382828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 7993214 - 7993336
Alignment:
Q  64 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||| ||||||||||| ||||| ||||||| || ||||||||||    
T  7993214 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtct 7993313  T
Q  164 ttcatgaaaacatcagatttctt 186  Q
    |||||||||| || |||||||||    
T  7993314 ttcatgaaaagataagatttctt 7993336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 8675364 - 8675527
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||| ||| ||||||||||||||||||||||  |||||||||||||    
T  8675364 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaacttcgaaggattgtttaataaattggattttgatggat 8675463  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||| ||||| ||||||| || |||||||||    
T  8675464 tttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttctt 8675527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 9882405 - 9882243
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  9882405 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggat 9882306  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| |||||||  | ||||||||||||||| |||| || |||||||||    
T  9882305 tttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaaatgagatttctt 9882243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 31638910 - 31639015
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31638910 tgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 31639009  T
Q  120 gatttt 125  Q
    ||||||    
T  31639010 gatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 43187485 - 43187366
Alignment:
Q  64 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 163  Q
    |||||||||||||||||||||||| |||| ||||||||||||||  |||||||||| ||||||| ||||||||||||||||||||| || ||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  164 ttcatgaaaacatcagattt 183  Q
    |||||||| |||| ||||||    
T  43187385 ttcatgaagacatgagattt 43187366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 12740439 - 12740573
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || || |    
T  12740439 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaatg-gattttgatagattttgtgggattttatagtgtaattttaacaagaga 12740537  T
Q  158 aagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||| |||| || |||||||||| |||||    
T  12740538 aagtctttcataaaaagatgagatttcttaagattg 12740573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 9179912 - 9180071
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    ||||||||||||||||||| |||||||       |||| ||||||| |||||||| | ||||| ||||||||||||||||||||          ||||||    
T  9179912 gtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcacttaaattccgaaggattgtttaataaat----------tggatt 9180001  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||| |||||    
T  9180002 ttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttcttaggattg 9180071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 727587 - 727692
Alignment:
Q  59 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaa 158  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  727587 tctagtagtattcaaaatcattcaaatttcaaaggattgtttaataaatcagatt----------ttgtgggattttctagtgaaattttagcatgaaaa 727676  T
Q  159 agtctttcatgaaaac 174  Q
    ||||||||||||||||    
T  727677 agtctttcatgaaaac 727692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 25805763 - 25805862
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    ||||||||||||||||||||||||||| |||||||||||||||||   ||| |||||||||||||||||||||||| | |||||||||||||||||||||    
T  25805763 gtggtattcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 193
Target Start/End: Complemental strand, 3797226 - 3797066
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| ||||||||||| |||||| |||||| ||||||||||||||||||| |||||||||         
T  3797226 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaaaattttgaaggattgtttaataaattagattttga----- 3797132  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
        ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| |||||    
T  3797131 ----tgggattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat-agatttcttaggattg 3797066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 10676592 - 10676463
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||| || |||||||       ||||  | ||||||||||||||||||||||||||||||||||||||||||  ||||| ||||    
T  10676592 tgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttggatg 10676493  T
Q  120 gattttgtgggattttctagtgaaatttta 149  Q
    |||||| ||| ||||||| |||||||||||    
T  10676492 gattttatggaattttcttgtgaaatttta 10676463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 78 - 186
Target Start/End: Complemental strand, 37972981 - 37972873
Alignment:
Q  78 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatc 177  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||| |||||||| ||||| ||||||| || |||||||||||||||||||| ||     
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  178 agatttctt 186  Q
    ||| |||||    
T  37972881 agacttctt 37972873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 183
Target Start/End: Complemental strand, 44256935 - 44256775
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       || | ||||||||||||||||||||||||||||| |||||||||||||||  ||||| |||| ||    
T  44256935 ggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaat 44256836  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagattt 183  Q
    ||||| |||||||  |||| ||||||| || |||||||| |||||| |||| || ||||||    
T  44256835 tttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgagattt 44256775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 32883814 - 32883948
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    ||||||||| |||||| || |||||||       |||| ||||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||    
T  32883814 gtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatt 32883913  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaa 158  Q
    | |||||||||| ||||| ||||||| || |||||    
T  32883914 tcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 19810874 - 19810983
Alignment:
Q  67 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 166  Q
    |||||||||||||||||||||| || |||||||||||||||          |||||||||||| ||||||||||||||||||||||| |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaat----------tggattttgtggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  167 atgaaaacatcagatttctt 186  Q
    |||||||||| |||||||||    
T  19810964 atgaaaacatgagatttctt 19810983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 41827390 - 41827498
Alignment:
Q  78 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatc 177  Q
    ||||||| || |||||||||||||||||||  |||||||||||||||||||||||| | ||||| ||||||| || ||||| |||||||||||||| ||     
T  41827390 attcaaaatttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatg 41827489  T
Q  178 agatttctt 186  Q
    |||||||||    
T  41827490 agatttctt 41827498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 44122069 - 44121965
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||        ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  44122069 ggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 44121970  T
Q  123 tttgt 127  Q
    |||||    
T  44121969 tttgt 44121965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 19251605 - 19251711
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||          |||||||||  ||||||||| ||||||||||||||  |||    
T  19251605 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgatggattttcttgtgaaattttagcaataaa 19251694  T
Q  158 aagtctttcatgaaaac 174  Q
    |||||||||||||||||    
T  19251695 aagtctttcatgaaaac 19251711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 40460874 - 40460772
Alignment:
Q  25 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattt 124  Q
    ||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  40460874 tattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattt 40460775  T
Q  125 tgt 127  Q
    |||    
T  40460774 tgt 40460772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 46405600 - 46405494
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  |||||||||||||    
T  46405600 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgatggat 46405501  T
Q  123 tttgtgg 129  Q
    |||||||    
T  46405500 tttgtgg 46405494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 509687 - 509840
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  509687 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaacgattgtttaataaattggattttgatggat 509786  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    |||||          ||||  |||||| || |||||||||||||||||||| || |||||||||    
T  509787 tttgt----------agtgggattttaacaagaaaaagtctttcatgaaaagatgagatttctt 509840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 63 - 174
Target Start/End: Complemental strand, 1470362 - 1470252
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    ||||||||||||||| |||||||||  ||| |||||||||| ||| |||||||||| | ||||||||||||||||  | |||||||||||||||||| ||    
T  1470362 gtggtattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggattttctgataaaattttagcatgaaaaaatc 1470264  T
Q  163 tttcatgaaaac 174  Q
    |||  |||||||    
T  1470263 ttttttgaaaac 1470252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 37327958 - 37328062
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || || ||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||    
T  37327958 ggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggat 37328057  T
Q  123 tttgt 127  Q
    |||||    
T  37328058 tttgt 37328062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 29585586 - 29585649
Alignment:
Q  64 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 127  Q
    |||||||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||||||    
T  29585586 tggtattcaaaatcattcaaattttgaaggattgtttaataatttggattttgatggattttgt 29585649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 33892419 - 33892315
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||||||| ||||||| |||||||  |||||| ||| ||    
T  33892419 ggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgttaaataaattggatttttatgaat 33892320  T
Q  123 tttgt 127  Q
    |||||    
T  33892319 tttgt 33892315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 10617024 - 10617102
Alignment:
Q  98 tttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 176  Q
    |||||||||| |||||||||||||||||||| ||||||||||||| ||||||| |  || ||||||||||| |||||||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacat 10617102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 47066770 - 47066828
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  47066770 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 17001152 - 17001099
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  17001152 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 39028130 - 39028232
Alignment:
Q  25 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattt 124  Q
    ||||||||||||||| || |||||||       |||| ||| ||||||||||| |||||||| |||| |||||||||||||||  |||||||||||||||    
T  39028130 tattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaattacgaaagattgtttaataaattggattttgatggattt 39028229  T
Q  125 tgt 127  Q
    |||    
T  39028230 tgt 39028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 44623448 - 44623305
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||||||| ||||||||||||| |||||||       |||| ||| |||||||||||||||| ||||| || || ||||||||||||          ||    
T  44623448 tgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattcatatttctaaagactgtttaataaat----------tg 44623359  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 173  Q
     ||||||||| |||||||||||||||||||| |||||||||||| |||| ||||    
T  44623358 aattttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaa 44623305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 447854 - 447913
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    |||||||| |||||||||||||||||||| ||||||||||| |||  |||||||||||||    
T  447854 gtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 17001106 - 17001049
Alignment:
Q  129 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||| ||||| |||| || || |||||||||||||||||||| || |||||||||    
T  17001106 ggattttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttctt 17001049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 141; Significance: 7e-74; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 55302876 - 55303049
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55302876 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 55302975  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  55302976 gatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg 55303049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 25331164 - 25331361
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25331164 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatg 25331263  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  25331264 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 25331361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 20 - 192
Target Start/End: Complemental strand, 32951009 - 32950837
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32951009 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 32950910  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgatt 192  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  32950909 aattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaagatt 32950837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 1044840 - 1045007
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  1044840 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaactttcgaaggattgtttaataaatcagattttgatg 1044939  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctta 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1044940 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctta 1045007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 41881256 - 41881082
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 118  Q
    |||||||||||||||||||||||||||||||        || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41881256 tgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 41881157  T
Q  119 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  41881156 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 41881082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 7007407 - 7007580
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7007407 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 7007506  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
     ||||||||||||||||||||||||||||||||||||||  | |||||||||||||| |||||||||| |||||    
T  7007507 aattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatttcttaagattg 7007580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 30009851 - 30009653
Alignment:
Q  19 ctgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 118  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||  || ||||||||||||||||||||||||||    
T  30009851 ctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaattttaaatgattgtttaataaatcagattttgat 30009752  T
Q  119 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  30009751 ggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 30009653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 42786717 - 42786890
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42786717 tgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcatattttgatg 42786816  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||    
T  42786817 gattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattg 42786890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 34228756 - 34228559
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||| | ||||||||||||       ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  34228756 tgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatttcgaatgattgtttaataaatcagattttgatg 34228657  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  34228656 gattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 34228559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 12112978 - 12113144
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||| ||||||||||||||       ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  12112978 tgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttaatg 12113077  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12113078 gattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 12113144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 1112926 - 1113099
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  1112926 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatg 1113025  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  1113026 gattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatttcttaggattg 1113099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 22202048 - 22202215
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||| || ||||||||||||||| | |||||||||    
T  22202048 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcaaaagattgtttaataaataaaattttgatg 22202147  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctta 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22202148 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacattagatttctta 22202215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 30 - 215
Target Start/End: Original strand, 41320853 - 41321038
Alignment:
Q  30 aatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 129  Q
    |||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41320853 aatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 41320952  T
Q  130 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttac 215  Q
    ||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||||||| |||||       |||||||||||||||    
T  41320953 gatgttctagtgaaattttagtatgaaaaagtctttcataaaaacatgagatttcttaagattgattttttcttttaagattttac 41321038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 39479530 - 39479332
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnn--gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttga 117  Q
    |||||||||||||||||||||||||||||||         | || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39479530 tgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttga 39479431  T
Q  118 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttact 216  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||| |||||       ||||||||||||||||    
T  39479430 tggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaagcatgagatttcttaggattgtttttttcttttaagattttact 39479332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 25446083 - 25446227
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25446083 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatg 25446182  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctt 164  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  25446183 gattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 37046625 - 37046450
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 118  Q
    |||||||||||||||||||||||||||||||        |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37046625 tgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 37046526  T
Q  119 ggattttgtgggattttctagtg-aaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| |||||    
T  37046525 ggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattg 37046450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 28541732 - 28541874
Alignment:
Q  21 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgg 120  Q
    ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28541732 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatgg 28541831  T
Q  121 attttgtgggattttctagtgaaattttagcatgaaaaagtct 163  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  28541832 attttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 3436626 - 3436823
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||| ||||||||||||||||||||||| ||        |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3436626 tgtgatattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 3436725  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
     ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||||  ||||       |||||||||||||||||    
T  3436726 aattttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataagatttcttagaattgtttttttcttttaagattttacta 3436823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 19741081 - 19740929
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||||||||| |||||||| ||||||||||       |||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  19741081 tgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaatcattcaaatttcgaaggattgtttaataaattagattttgatg 19740982  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 172  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19740981 gattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 7249900 - 7249795
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7249801  T
Q  158 aagtct 163  Q
    ||||||    
T  7249800 aagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 46635815 - 46635648
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       || |||| |||||||||||||||||||||||||||||||||||||||||| |||||          
T  46635815 tgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattcaaatttcgaaggattgtttaataaataagatt------ 46635722  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  46635721 gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattg 46635648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 216
Target Start/End: Complemental strand, 31314893 - 31314719
Alignment:
Q  32 tcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggga 131  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||    
T  31314893 tcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg----------tggga 31314804  T
Q  132 ttttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttact 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       ||||||||||||||||    
T  31314803 ttttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttact 31314719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 5441440 - 5441603
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  5441440 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 5441539  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  5441540 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 5441603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 27768092 - 27768255
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  27768092 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 27768191  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  27768192 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 27768255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 54341180 - 54341343
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  54341180 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 54341279  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  54341280 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 54341343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 24131145 - 24130957
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||          ||||||| |||||||||||||||||||||||||||    
T  24131145 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa----------tttcgaatgattgtttaataaatcagattttgatg 24131056  T
Q  120 gattttgtgggattttctagtgaaattttagcatg-aaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  24131055 gattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 24130957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 61 - 193
Target Start/End: Complemental strand, 27454210 - 27454078
Alignment:
Q  61 tagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaag 160  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  27454210 tagtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaag 27454111  T
Q  161 tctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||||||| | |||| ||| |||||    
T  27454110 tctttcatgaaaacataatatttgttaagattg 27454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 24 - 173
Target Start/End: Original strand, 53275876 - 53276025
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    |||||||||||||| | ||||||||||       |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  53275876 gtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgtgtaataaatcagattttgatggatt 53275975  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 173  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||| ||||    
T  53275976 ttgtgagattttctaataaaattttagcatgaaaaagtctttcattaaaa 53276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 25 - 149
Target Start/End: Original strand, 23464993 - 23465117
Alignment:
Q  25 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattt 124  Q
    ||||||||||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23464993 tattcaatcaagactcttaatcacttaaaataagtctagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatggattt 23465092  T
Q  125 tgtgggattttctagtgaaatttta 149  Q
    |||||||||||||||| ||||||||    
T  23465093 tgtgggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 37828537 - 37828409
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||  | ||||    
T  37828537 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaa 37828438  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||||||| || |||||||||    
T  37828437 aagtctttcatgaaaagatgagatttctt 37828409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 37915863 - 37916023
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  37915863 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 37915962  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagattt 183  Q
    ||||||||||||| ||||| | ||||| || ||||||||| |||||||||| || ||||||    
T  37915963 tttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagataagattt 37916023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 51320957 - 51321120
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  51320957 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 51321056  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||  ||||| ||||| ||||||| || |||||||| ||||||||||| || |||||||||    
T  51321057 tttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttctt 51321120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 54853637 - 54853475
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    |||||||||||||||| || |||||||       |||| |||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||    
T  54853637 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggatt 54853538  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||||| ||||| ||||||| || |||||| ||||||||||||| || |||||||||    
T  54853537 ttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 54853475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 48261198 - 48261326
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    || ||||||||||||| || |||||||||    
T  48261298 aaatctttcatgaaaatatgagatttctt 48261326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 9163109 - 9163274
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||| | || ||||| |       |||| ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  9163109 tgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattaaattttgatg 9163208  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||| ||||||||||||||||||||||||||        |||||||||||| ||||||||||||||||    
T  9163209 gattttgtggaattttctagtgaaattttagcatgaa--------tcatgaaaacatgagatttcttatgattg 9163274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 25504812 - 25504696
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||| ||||||||||||||||||||||||||       ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25504812 tgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 25504713  T
Q  120 gattttgtgggattttc 136  Q
    |||||||||||||||||    
T  25504712 gattttgtgggattttc 25504696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 44770982 - 44770862
Alignment:
Q  64 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 163  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||  | ||||||||||    
T  44770982 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtct 44770883  T
Q  164 ttcatgaaaacatcagatttc 184  Q
    |||||||  |||| |||||||    
T  44770882 ttcatgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 32322127 - 32322290
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  32322127 ggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggat 32322226  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| |||||||  | ||||| ||||||||| |||| || |||||||||    
T  32322227 tttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgagatttctt 32322290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 192
Target Start/End: Complemental strand, 40537280 - 40537161
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||          ||||||||||||||||||||||||    
T  40537280 gtggtattcaaaatcatttaaatttcgaatgattgtttaataaatctgattttgatggattttgtg----------gtgaaattttagcatgaaaaagtc 40537191  T
Q  163 tttcatgaaaacatcagatttcttatgatt 192  Q
    |||||||||||||| |||||||||| ||||    
T  40537190 tttcatgaaaacatgagatttcttaggatt 40537161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 23987250 - 23987403
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||| ||| || |||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23987250 ggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggat 23987349  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||          ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  23987350 tttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 23987403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 39307426 - 39307259
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||| |||| |||| ||       |||| |||||||||| ||||||||||||||| || |||| |||||| |||    ||||||||    
T  39307426 tgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataatcattcaaatttctaaagattatttaatgaattgagttttgatg 39307327  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctta 187  Q
     ||||||||||||||||||||||||||||| ||||||||||| | | || ||||||| ||||||||||    
T  39307326 aattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaacatgagatttctta 39307259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 186
Target Start/End: Original strand, 8711978 - 8712065
Alignment:
Q  99 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttctt 8712065  T

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Target: chr4; HSP #43
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 12913301 - 12913413
Alignment:
Q  64 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 163  Q
    |||||||||||||||||||||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||| || |||||||| |    
T  12913301 tggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattttgtgggattttctagtgaaattttaacaagaaaaagtat 12913390  T
Q  164 ttcatgaaaacatcagatttctt 186  Q
    |||||||| |||| |||||||||    
T  12913391 ttcatgaagacatgagatttctt 12913413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 56445474 - 56445362
Alignment:
Q  64 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 163  Q
    |||||||||||||||||||||||||||| |||||||||||||||          ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  164 ttcatgaaaacatcagatttctt 186  Q
    ||||| || |||| |||||||||    
T  56445384 ttcataaagacatgagatttctt 56445362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 24736447 - 24736541
Alignment:
Q  99 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||  ||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||||||||||||| ||||||||| ||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattg 24736541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 41725196 - 41725321
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||   ||  |||||||||| ||||||||||||||| ||||| ||||||| || ||||    
T  41725196 gtcttgtgatattcaaaatcattcaaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaa 41725292  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    || ||||||||||||| || |||||||||    
T  41725293 aaatctttcatgaaaagatgagatttctt 41725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 29649837 - 29649731
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  29649837 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggat 29649738  T
Q  123 tttgtgg 129  Q
    |||||||    
T  29649737 tttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 30967469 - 30967316
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||          |||||    
T  30967469 ggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat----------tggat 30967380  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||||| ||||| ||||||| || |||||| ||||||||||||| || |||||||||    
T  30967379 tttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataagatttctt 30967316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 28371001 - 28371086
Alignment:
Q  64 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 149  Q
    ||||||||||||||||||||||||  ||||||||||||||||||   |||||| || |||||||||||||||||||||||||||||    
T  28371001 tggtattcaaaatcattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 36479366 - 36479249
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||||||           ||||||||||||||||  |||    
T  36479366 gtctcgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaaa 36479278  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    |||||||| |||||||||| |||||||||    
T  36479277 aagtcttttatgaaaacatgagatttctt 36479249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 28483935 - 28484093
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||| ||||||||||          |||||    
T  28483935 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaat----------tggat 28484024  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgatt 192  Q
    ||||| ||||||| ||||| || |||| || |||||||||||||||||||| |  |||||||||| ||||    
T  28484025 tttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatgaaaagacgagatttcttaagatt 28484093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 49834983 - 49834890
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 116  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  49834983 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 11090435 - 11090510
Alignment:
Q  118 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||| |||||||||| |||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattg 11090510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 168
Target Start/End: Complemental strand, 49501681 - 49501546
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||| |||||||||||||||||||||||| |||||||||||||||          |||||    
T  49501681 ggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggat 49501592  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 168  Q
    ||||||| ||||| ||||| ||||||| || |||||||||||||||    
T  49501591 tttgtggaattttgtagtgtaattttaacaagaaaaagtctttcat 49501546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 168
Target Start/End: Complemental strand, 49507746 - 49507611
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||| |||||||||||||||||||||||| |||||||||||||||          |||||    
T  49507746 ggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggat 49507657  T
Q  123 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 168  Q
    ||||||| ||||| ||||| ||||||| || |||||||||||||||    
T  49507656 tttgtggaattttgtagtgtaattttaacaagaaaaagtctttcat 49507611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 184
Target Start/End: Original strand, 20021424 - 20021531
Alignment:
Q  78 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagc-atgaaaaagtctttcatgaaaacat 176  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||| ||||||||| || |||||||||| | |  ||||| ||||||||||| ||||    
T  20021424 attcaaattttaaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacat 20021523  T
Q  177 cagatttc 184  Q
     |||||||    
T  20021524 aagatttc 20021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 187
Target Start/End: Complemental strand, 41581923 - 41581795
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatg-aa 156  Q
    |||| |||||||| | | |||||||||||| |||  ||||||||||||||  ||||  |||  ||||||||||||||||||||||||||||| |||| ||    
T  41581923 gtctcgtggtatttagagtcattcaaattttgaataattgtttaataaattggatt--gatatattttgtgggattttctagtgaaattttaacatgaaa 41581826  T
Q  157 aaagtctttcatgaaaacatcagatttctta 187  Q
    ||| | ||||||| |||||| ||||||||||    
T  41581825 aaaatatttcatgtaaacatgagatttctta 41581795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 58 - 183
Target Start/End: Original strand, 5800049 - 5800164
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||          ||||||||||| |||||| ||| | ||||||| || ||||    
T  5800049 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat----------tggattttgtgagattttgtagagtaattttaacaagaaa 5800138  T
Q  158 aagtctttcatgaaaacatcagattt 183  Q
    |||||||| ||||||| || ||||||    
T  5800139 aagtctttaatgaaaagataagattt 5800164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 32684123 - 32684065
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  32684123 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 50018322 - 50018391
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 127  Q
    |||| ||||||||||| ||||||||||||| |||||||||||||||||||   ||||| |||||||||||    
T  50018322 gtcttgtggtattcaagatcattcaaattttgaaggattgtttaataaattgaattttaatggattttgt 50018391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 36728023 - 36727972
Alignment:
Q  119 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 170  Q
    ||||||||| ||||||| ||||||||||||| || |||||| ||||||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatga 36727972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 12193135 - 12193227
Alignment:
Q  93 gattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttct 185  Q
    ||||||||||||| |   |||||| |||||||||||||| | | ||||||| ||| ||||| ||||| |||| ||| ||||||  ||||||||    
T  12193135 gattgtttaataagttgaattttggtggattttgtgggaatatttagtgaattttcagcataaaaaaatcttacattaaaacacaagatttct 12193227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 15202 - 15009
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15202 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 15103  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||       |||||||||||||||||    
T  15102 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaagattttacta 15009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 15845 - 15652
Alignment:
Q  24 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 123  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15845 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 15746  T
Q  124 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||       |||||||||||||||||    
T  15745 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaagattttacta 15652  T

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Target: scaffold0151 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 38777 - 38581
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  38777 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcagattttgatg 38679  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattgnnnnnnncttttaagattttacta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||||    
T  38678 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 38581  T

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Target: scaffold0004 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 102129 - 102302
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  102129 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatg 102228  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  102229 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagatttcttatgattg 102302  T

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Target: scaffold0113 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 39068 - 38895
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||||||||||| |||||||||||||||||       |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39068 tgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatg 38969  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||    
T  38968 gattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattg 38895  T

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Target: scaffold0037 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 100245 - 100412
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    ||||||| |||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  100245 tgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcaaattttgatg 100344  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttctta 187  Q
    ||||||||||| |||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  100345 gattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatttctta 100412  T

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Target: scaffold0276 (Bit Score: 104; Significance: 9e-52; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 20 - 192
Target Start/End: Complemental strand, 712 - 540
Alignment:
Q  20 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 119  Q
    |||||||||||||||| ||||||||||||||        | ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  712 tgtggtattcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatg 613  T
Q  120 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgatt 192  Q
    |||||||||| |||||||||||||||||| | |||||||||||||| | |||||||| |||||||||| ||||    
T  612 gattttgtggaattttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgagatttcttaggatt 540  T

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Target: scaffold0110 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 39747 - 39624
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  39747 gtggtattcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 39648  T
Q  163 tttcatgaaaacatcagatttctt 186  Q
    ||||||||||| || |||||||||    
T  39647 tttcatgaaaagataagatttctt 39624  T

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Target: scaffold0054 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 37035 - 36914
Alignment:
Q  65 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctt 164  Q
    |||||||||||||||| ||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||    
T  37035 ggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 36936  T
Q  165 tcatgaaaacatcagatttctt 186  Q
    ||||||||| || |||||||||    
T  36935 tcatgaaaagataagatttctt 36914  T

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Target: scaffold0543 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 10637 - 10760
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||| ||||||||| ||||| ||||||| || |||||||||    
T  10637 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 10736  T
Q  163 tttcatgaaaacatcagatttctt 186  Q
    ||||||||||| || |||||||||    
T  10737 tttcatgaaaagatgagatttctt 10760  T

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Target: scaffold1504 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 936 - 1063
Alignment:
Q  58 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 157  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||| ||||| ||||||| |  ||||    
T  936 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttaataaat-agattttgatggattttgtgggattttgtagtgtaattttaactagaaa 1034  T
Q  158 aagtctttcatgaaaacatcagatttctt 186  Q
    ||||||||||| |||| || |||||||||    
T  1035 aagtctttcattaaaatatgagatttctt 1063  T

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Target: scaffold0042 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 58206 - 58083
Alignment:
Q  63 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 162  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| || || ||| ||    
T  58206 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatc 58107  T
Q  163 tttcatgaaaacatcagatttctt 186  Q
    ||||||||||| || |||||||||    
T  58106 tttcatgaaaagatgagatttctt 58083  T

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Target: scaffold0306 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 13919 - 14023
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  |||||||||||||    
T  13919 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggat 14018  T
Q  123 tttgt 127  Q
    |||||    
T  14019 tttgt 14023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 21408 - 21304
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  |||||||||||||    
T  21408 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggat 21309  T
Q  123 tttgt 127  Q
    |||||    
T  21308 tttgt 21304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 4237 - 4337
Alignment:
Q  23 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 122  Q
    ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  4237 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggat 4336  T
Q  123 t 123  Q
    |    
T  4337 t 4337  T

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Target: scaffold0839 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 3798 - 3712
Alignment:
Q  87 tcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 173  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||| ||||||||| ||||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaa 3712  T

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Target: scaffold0347 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 14892 - 14967
Alignment:
Q  118 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatcagatttcttatgattg 193  Q
    |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||| |||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattg 14967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 199905 - 199998
Alignment:
Q  66 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 159  Q
    ||||| |||||||||||||||| ||| || ||||||||||||   |||||||| ||||||||| |||||| |||||||| ||||| || |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtgaaactttagtataaaaaa 199998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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