View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0939_low_44 (Length: 293)
Name: NF0939_low_44
Description: NF0939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0939_low_44 |
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Alignment Details
Target: chr4 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 67 - 245
Target Start/End: Original strand, 24892690 - 24892868
Alignment:
| Q |
67 |
agtctctgactcagtcaacctaacacaaactaacagacaaaatattttcacaacatagtatctcagtcatttttaaattttaatgttggcggtgtcagca |
166 |
Q |
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| T |
24892690 |
agtctctgactcagtcaacctaacacaaactcacagacaaaatattttcacaacatagcatctcagtcatttttaaattttaatgttggcagtgtcagca |
24892789 |
T |
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| Q |
167 |
gtcacttcatgctctacctcaaacatcctttatttcaaaaattcattcttcgttggaacatcgcaaatcataggttcat |
245 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
24892790 |
gtcacttcatgctctacctcaaacgtcctttatttcaaaaattcattcttcattggaacatcgcaaatcataggttcat |
24892868 |
T |
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