View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0940_low_31 (Length: 287)
Name: NF0940_low_31
Description: NF0940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0940_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 30 - 274
Target Start/End: Original strand, 34639884 - 34640127
Alignment:
| Q |
30 |
cttgtgtacgtcaattttaaacctgtgaaaaacgcatgtcgtttttctttctaataaacattttccccggaaaaacacagacaatttattaaagaactca |
129 |
Q |
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| T |
34639884 |
cttgtgtacgtcaattttaaacctgtgaaaaacgcatgtcatttttctttctaataaacattttccccggaaaaacacagacaatttattaaagaactca |
34639983 |
T |
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| Q |
130 |
tgaagtgtttatatgagtgcaaatatctaggttagtgaattcaagtaagtttttgtttgttttaaaggcaaatgatgttatataataaccacgtcgagag |
229 |
Q |
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| T |
34639984 |
tgaagtgtttatatgagtgcaaatatcta-gttagtgaattcaagtaagtttttgtttgttttaaaggcaaatgatgttatataataaccacgtcgagag |
34640082 |
T |
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| Q |
230 |
acaagatgactaaggatggaacaatacaagtaaaagaaagaagaa |
274 |
Q |
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| T |
34640083 |
acaagatgactaaggatggaacaatgcaagtaaaagaaagaagaa |
34640127 |
T |
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