View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0941_high_21 (Length: 455)

Name: NF0941_high_21
Description: NF0941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0941_high_21
NF0941_high_21
[»] chr4 (77 HSPs)
chr4 (20-331)||(36314684-36314995)
chr4 (20-331)||(36328893-36329204)
chr4 (20-305)||(54867511-54867796)
chr4 (20-290)||(25861527-25861798)
chr4 (20-312)||(16622766-16623058)
chr4 (20-312)||(16628345-16628637)
chr4 (24-312)||(3777885-3778173)
chr4 (20-239)||(5268745-5268965)
chr4 (26-313)||(38151909-38152197)
chr4 (20-312)||(6742888-6743180)
chr4 (20-312)||(5396164-5396436)
chr4 (20-304)||(10047713-10047982)
chr4 (20-202)||(8689079-8689261)
chr4 (20-313)||(5148010-5148303)
chr4 (20-201)||(34570714-34570894)
chr4 (20-212)||(37740303-37740494)
chr4 (20-211)||(5429358-5429547)
chr4 (20-203)||(5143592-5143776)
chr4 (70-245)||(26363691-26363866)
chr4 (70-247)||(27417518-27417696)
chr4 (70-247)||(41638988-41639166)
chr4 (22-211)||(9927759-9927951)
chr4 (24-176)||(29254207-29254358)
chr4 (87-211)||(12745782-12745907)
chr4 (43-176)||(54200228-54200361)
chr4 (70-274)||(6655352-6655557)
chr4 (376-446)||(36314571-36314641)
chr4 (376-446)||(36328780-36328850)
chr4 (70-208)||(40630447-40630585)
chr4 (90-208)||(50674433-50674551)
chr4 (106-232)||(54882480-54882605)
chr4 (23-211)||(52095665-52095851)
chr4 (20-190)||(26175936-26176093)
chr4 (20-208)||(35661902-35662077)
chr4 (92-203)||(46570115-46570226)
chr4 (25-120)||(12739855-12739949)
chr4 (25-120)||(12748061-12748155)
chr4 (23-176)||(52082960-52083113)
chr4 (23-176)||(52093967-52094120)
chr4 (254-312)||(5143809-5143867)
chr4 (254-306)||(8689042-8689094)
chr4 (263-313)||(5268690-5268740)
chr4 (90-208)||(36994241-36994359)
chr4 (254-315)||(18860464-18860524)
chr4 (20-128)||(30000105-30000212)
chr4 (25-176)||(31985242-31985394)
chr4 (254-306)||(18856252-18856304)
chr4 (70-189)||(50263265-50263383)
chr4 (254-304)||(3814548-3814598)
chr4 (248-313)||(9194158-9194224)
chr4 (254-304)||(9223906-9223956)
chr4 (254-304)||(9228693-9228743)
chr4 (25-79)||(12745741-12745794)
chr4 (254-304)||(24742520-24742570)
chr4 (254-304)||(51520993-51521043)
chr4 (254-304)||(56141518-56141568)
chr4 (66-202)||(3909784-3909919)
chr4 (254-306)||(45347322-45347374)
chr4 (253-300)||(29761181-29761228)
chr4 (125-203)||(2209188-2209266)
chr4 (257-303)||(13992824-13992870)
chr4 (257-303)||(28467986-28468032)
chr4 (25-120)||(48142810-48142904)
chr4 (66-149)||(24968850-24968933)
chr4 (92-147)||(39773976-39774031)
chr4 (125-203)||(56179028-56179107)
chr4 (254-304)||(5135656-5135706)
chr4 (254-304)||(5137882-5137932)
chr4 (21-87)||(5370387-5370451)
chr4 (254-304)||(5733190-5733240)
chr4 (254-304)||(8392989-8393039)
chr4 (254-304)||(8395198-8395248)
chr4 (254-299)||(7122279-7122324)
chr4 (254-299)||(7124501-7124546)
chr4 (67-120)||(18377732-18377785)
chr4 (20-120)||(56178936-56179035)
chr4 (121-176)||(30000873-30000929)
[»] scaffold0006 (5 HSPs)
scaffold0006 (20-312)||(6017-6310)
scaffold0006 (20-312)||(2825-3118)
scaffold0006 (20-202)||(132862-133044)
scaffold0006 (235-304)||(149582-149651)
scaffold0006 (255-299)||(132765-132809)
[»] chr1 (55 HSPs)
chr1 (20-312)||(13598732-13599025)
chr1 (20-312)||(37070099-37070392)
chr1 (20-313)||(3282039-3282332)
chr1 (20-291)||(29652145-29652418)
chr1 (20-203)||(49918035-49918217)
chr1 (20-176)||(21536179-21536335)
chr1 (24-203)||(28223725-28223904)
chr1 (20-272)||(44454776-44455028)
chr1 (24-203)||(28220530-28220709)
chr1 (27-203)||(31658924-31659099)
chr1 (20-203)||(3206671-3206855)
chr1 (20-176)||(30476748-30476903)
chr1 (20-203)||(10924909-10925091)
chr1 (20-202)||(13604205-13604387)
chr1 (20-202)||(3156554-3156734)
chr1 (232-315)||(21536109-21536192)
chr1 (70-313)||(37033636-37033878)
chr1 (19-191)||(1833219-1833391)
chr1 (24-203)||(4552951-4553130)
chr1 (26-202)||(26644483-26644656)
chr1 (88-203)||(3189036-3189153)
chr1 (88-203)||(3197853-3197970)
chr1 (70-247)||(193035-193213)
chr1 (106-211)||(37879494-37879599)
chr1 (233-313)||(16124179-16124259)
chr1 (92-176)||(29135763-29135847)
chr1 (25-176)||(13316623-13316774)
chr1 (20-203)||(20762357-20762540)
chr1 (92-211)||(11348179-11348298)
chr1 (71-176)||(13547657-13547761)
chr1 (71-176)||(13549568-13549672)
chr1 (20-87)||(37503854-37503920)
chr1 (43-148)||(46064659-46064764)
chr1 (254-306)||(1054519-1054571)
chr1 (254-306)||(39446025-39446077)
chr1 (254-306)||(44023382-44023434)
chr1 (253-304)||(24793673-24793724)
chr1 (118-199)||(16124245-16124327)
chr1 (235-304)||(13659821-13659890)
chr1 (64-149)||(22819806-22819891)
chr1 (254-303)||(41391128-41391177)
chr1 (255-299)||(13604108-13604152)
chr1 (71-154)||(16455381-16455464)
chr1 (254-305)||(25439405-25439456)
chr1 (254-305)||(25444598-25444649)
chr1 (110-148)||(15820048-15820086)
chr1 (257-303)||(24202260-24202306)
chr1 (254-303)||(41398764-41398813)
chr1 (254-306)||(26644379-26644431)
chr1 (254-314)||(43987946-43988006)
chr1 (254-317)||(44203213-44203275)
chr1 (254-304)||(9036010-9036060)
chr1 (257-303)||(19360921-19360967)
chr1 (257-299)||(40281971-40282013)
chr1 (257-303)||(51764999-51765045)
[»] chr2 (48 HSPs)
chr2 (20-304)||(21630277-21630561)
chr2 (24-310)||(20522558-20522844)
chr2 (20-313)||(33528096-33528389)
chr2 (20-312)||(10706725-10707017)
chr2 (47-304)||(39483235-39483493)
chr2 (20-313)||(23077943-23078236)
chr2 (20-312)||(13569662-13569954)
chr2 (20-313)||(33118467-33118751)
chr2 (20-311)||(8389624-8389914)
chr2 (20-211)||(34389183-34389374)
chr2 (102-312)||(17865591-17865808)
chr2 (20-266)||(14698528-14698774)
chr2 (20-211)||(2837144-2837334)
chr2 (20-211)||(36318309-36318500)
chr2 (20-211)||(36988375-36988566)
chr2 (20-249)||(39284536-39284753)
chr2 (20-211)||(28258751-28258942)
chr2 (24-176)||(2334721-2334873)
chr2 (20-211)||(29867557-29867737)
chr2 (24-213)||(45099430-45099619)
chr2 (70-247)||(35447451-35447627)
chr2 (127-242)||(17863839-17863955)
chr2 (20-84)||(36757463-36757527)
chr2 (20-176)||(5723554-5723710)
chr2 (20-84)||(38312045-38312108)
chr2 (20-176)||(4503432-4503588)
chr2 (20-84)||(17057669-17057732)
chr2 (20-84)||(17085652-17085715)
chr2 (254-314)||(28258667-28258727)
chr2 (254-306)||(36757423-36757475)
chr2 (20-87)||(6595306-6595371)
chr2 (254-304)||(9295869-9295919)
chr2 (254-304)||(11098394-11098444)
chr2 (254-304)||(14292068-14292118)
chr2 (254-312)||(19344952-19345010)
chr2 (254-304)||(32247295-32247345)
chr2 (254-304)||(39811484-39811534)
chr2 (254-304)||(44310478-44310528)
chr2 (257-303)||(25410211-25410257)
chr2 (257-303)||(32289157-32289203)
chr2 (20-73)||(17865536-17865589)
chr2 (263-312)||(19349819-19349868)
chr2 (24-176)||(36205967-36206121)
chr2 (263-303)||(30832930-30832970)
chr2 (257-319)||(3492322-3492384)
chr2 (257-299)||(4484868-4484910)
chr2 (254-304)||(12647910-12647960)
chr2 (257-303)||(40739402-40739448)
[»] chr5 (65 HSPs)
chr5 (20-314)||(14520562-14520856)
chr5 (20-303)||(11916453-11916737)
chr5 (20-312)||(12083650-12083942)
chr5 (20-268)||(13487825-13488071)
chr5 (20-209)||(32636503-32636692)
chr5 (20-247)||(42426535-42426762)
chr5 (71-247)||(31004691-31004868)
chr5 (20-176)||(19806119-19806274)
chr5 (20-213)||(13239428-13239620)
chr5 (20-268)||(42428730-42428966)
chr5 (64-249)||(16650965-16651151)
chr5 (70-211)||(5057509-5057650)
chr5 (20-241)||(37438793-37439016)
chr5 (28-303)||(9352816-9353091)
chr5 (70-176)||(27015027-27015133)
chr5 (20-120)||(533538-533637)
chr5 (20-208)||(30683220-30683395)
chr5 (20-176)||(36931958-36932114)
chr5 (26-142)||(16649928-16650044)
chr5 (20-99)||(28750955-28751034)
chr5 (20-176)||(13342773-13342929)
chr5 (20-176)||(25412474-25412630)
chr5 (113-247)||(40146691-40146825)
chr5 (20-174)||(30182302-30182457)
chr5 (106-176)||(39468917-39468987)
chr5 (87-176)||(535616-535705)
chr5 (20-148)||(36074344-36074471)
chr5 (125-268)||(38746390-38746534)
chr5 (70-141)||(38746535-38746606)
chr5 (254-312)||(31401346-31401404)
chr5 (20-88)||(535684-535751)
chr5 (252-304)||(31180771-31180823)
chr5 (254-314)||(31396487-31396547)
chr5 (252-304)||(43592795-43592847)
chr5 (254-304)||(1456645-1456695)
chr5 (254-312)||(2785905-2785963)
chr5 (254-304)||(15045222-15045272)
chr5 (254-304)||(27450352-27450402)
chr5 (254-304)||(29402557-29402607)
chr5 (254-304)||(30631891-30631941)
chr5 (254-312)||(33768714-33768772)
chr5 (254-312)||(33791846-33791904)
chr5 (254-304)||(43599261-43599311)
chr5 (254-304)||(43604753-43604803)
chr5 (254-304)||(43610245-43610295)
chr5 (257-300)||(36931855-36931898)
chr5 (254-317)||(37556120-37556182)
chr5 (257-303)||(16407650-16407696)
chr5 (254-304)||(16544001-16544051)
chr5 (254-304)||(16546223-16546273)
chr5 (254-304)||(27445509-27445559)
chr5 (237-303)||(37560955-37561021)
chr5 (254-305)||(28807082-28807133)
chr5 (254-304)||(10592851-10592901)
chr5 (20-141)||(11181474-11181597)
chr5 (257-303)||(15465070-15465116)
chr5 (257-303)||(16409086-16409132)
chr5 (257-303)||(26177475-26177521)
chr5 (254-304)||(40379685-40379735)
chr5 (255-304)||(22536796-22536845)
chr5 (254-299)||(25077718-25077763)
chr5 (254-299)||(25135687-25135732)
chr5 (166-211)||(28751027-28751072)
chr5 (263-299)||(35388197-35388233)
chr5 (268-304)||(43625605-43625641)
[»] chr7 (62 HSPs)
chr7 (19-313)||(2647170-2647463)
chr7 (20-303)||(33331931-33332215)
chr7 (1-312)||(21983557-21983867)
chr7 (20-312)||(79720-80013)
chr7 (20-319)||(21989240-21989538)
chr7 (20-242)||(49092021-49092245)
chr7 (25-247)||(47676441-47676663)
chr7 (22-269)||(14070135-14070382)
chr7 (22-269)||(14380163-14380410)
chr7 (25-245)||(47674248-47674468)
chr7 (20-272)||(4796181-4796434)
chr7 (20-176)||(2761602-2761757)
chr7 (24-311)||(46515802-46516068)
chr7 (20-211)||(23554717-23554908)
chr7 (20-249)||(18126284-18126512)
chr7 (42-274)||(26416928-26417160)
chr7 (23-202)||(4538853-4539032)
chr7 (20-246)||(4585804-4586029)
chr7 (20-176)||(1113369-1113525)
chr7 (67-270)||(27347542-27347745)
chr7 (19-211)||(48489108-48489300)
chr7 (70-247)||(32358403-32358580)
chr7 (43-312)||(47263998-47264267)
chr7 (28-312)||(2479676-2479960)
chr7 (92-247)||(2389716-2389871)
chr7 (20-149)||(6570333-6570462)
chr7 (28-149)||(44847762-44847882)
chr7 (20-176)||(48491291-48491447)
chr7 (70-191)||(6360479-6360600)
chr7 (87-208)||(43863942-43864063)
chr7 (24-161)||(29990782-29990919)
chr7 (24-203)||(4178460-4178639)
chr7 (49-211)||(19495647-19495811)
chr7 (112-204)||(30026391-30026482)
chr7 (20-175)||(35853626-35853783)
chr7 (20-100)||(30025032-30025111)
chr7 (254-306)||(31109075-31109127)
chr7 (24-161)||(24515064-24515201)
chr7 (254-304)||(2058547-2058597)
chr7 (254-304)||(4873664-4873714)
chr7 (254-304)||(12406800-12406850)
chr7 (254-304)||(20357035-20357085)
chr7 (254-304)||(21640366-21640416)
chr7 (20-73)||(2759079-2759131)
chr7 (263-303)||(21646594-21646634)
chr7 (254-305)||(24260827-24260878)
chr7 (254-313)||(44847618-44847677)
chr7 (257-320)||(48408390-48408453)
chr7 (257-303)||(1532893-1532939)
chr7 (254-304)||(12397435-12397485)
chr7 (254-304)||(18392723-18392773)
chr7 (257-303)||(39730942-39730988)
chr7 (254-303)||(21811747-21811796)
chr7 (255-300)||(24023830-24023875)
chr7 (39-75)||(2759005-2759041)
chr7 (70-130)||(3050492-3050552)
chr7 (125-193)||(31733354-31733422)
chr7 (254-304)||(1562530-1562580)
chr7 (254-304)||(6592864-6592914)
chr7 (257-303)||(18414220-18414266)
chr7 (254-304)||(32060831-32060881)
chr7 (255-304)||(18390506-18390555)
[»] chr3 (95 HSPs)
chr3 (20-312)||(40592244-40592536)
chr3 (20-304)||(30709266-30709551)
chr3 (20-312)||(36029425-36029717)
chr3 (20-312)||(39032017-39032309)
chr3 (20-304)||(48438547-48438832)
chr3 (20-299)||(40734087-40734366)
chr3 (20-313)||(8126962-8127256)
chr3 (20-251)||(1735828-1736058)
chr3 (20-314)||(27027038-27027333)
chr3 (20-280)||(47923397-47923658)
chr3 (87-314)||(21711600-21711828)
chr3 (20-314)||(27038383-27038668)
chr3 (61-299)||(40735018-40735257)
chr3 (20-299)||(40844987-40845266)
chr3 (20-266)||(8369997-8370243)
chr3 (20-246)||(29812705-29812931)
chr3 (24-310)||(35925816-35926112)
chr3 (20-211)||(16264681-16264872)
chr3 (20-173)||(24694767-24694920)
chr3 (25-274)||(5236761-5237010)
chr3 (70-269)||(4569353-4569552)
chr3 (71-291)||(43404301-43404523)
chr3 (25-247)||(29810509-29810731)
chr3 (106-247)||(31340645-31340787)
chr3 (70-242)||(54593133-54593305)
chr3 (28-303)||(37726015-37726290)
chr3 (20-211)||(44331747-44331937)
chr3 (70-242)||(55302532-55302703)
chr3 (20-203)||(7764137-7764320)
chr3 (90-291)||(43402377-43402580)
chr3 (23-203)||(7761950-7762129)
chr3 (106-211)||(49200054-49200159)
chr3 (20-247)||(51398467-51398682)
chr3 (97-245)||(46173160-46173307)
chr3 (25-203)||(9636433-9636611)
chr3 (106-210)||(44331248-44331352)
chr3 (70-247)||(40912760-40912938)
chr3 (28-202)||(33386247-33386421)
chr3 (125-247)||(36018285-36018408)
chr3 (24-303)||(37408045-37408323)
chr3 (20-203)||(5258444-5258627)
chr3 (70-211)||(6096167-6096308)
chr3 (25-203)||(45094849-45095028)
chr3 (234-304)||(24694655-24694726)
chr3 (20-143)||(25929027-25929150)
chr3 (92-203)||(34490700-34490811)
chr3 (20-141)||(27974586-27974706)
chr3 (263-315)||(1730905-1730957)
chr3 (43-211)||(23410653-23410820)
chr3 (253-312)||(16264895-16264954)
chr3 (25-202)||(27453294-27453471)
chr3 (254-312)||(27974433-27974491)
chr3 (24-176)||(5260627-5260779)
chr3 (254-304)||(22172669-22172719)
chr3 (254-304)||(40372263-40372313)
chr3 (235-304)||(16498644-16498713)
chr3 (252-304)||(8738549-8738601)
chr3 (252-304)||(9090787-9090839)
chr3 (244-304)||(47923327-47923387)
chr3 (254-313)||(2672417-2672476)
chr3 (102-176)||(27986074-27986149)
chr3 (254-312)||(2676574-2676632)
chr3 (254-304)||(4599050-4599100)
chr3 (254-304)||(4601271-4601321)
chr3 (254-304)||(7167825-7167875)
chr3 (254-304)||(8477945-8477995)
chr3 (257-303)||(23198475-23198521)
chr3 (257-303)||(23200674-23200720)
chr3 (257-303)||(26928089-26928135)
chr3 (254-304)||(28501159-28501209)
chr3 (254-304)||(28503326-28503376)
chr3 (20-130)||(32143654-32143763)
chr3 (254-304)||(32476014-32476064)
chr3 (254-304)||(32480872-32480922)
chr3 (254-299)||(10055817-10055862)
chr3 (254-299)||(10058039-10058084)
chr3 (254-299)||(10060261-10060306)
chr3 (254-299)||(10062483-10062528)
chr3 (254-299)||(10064705-10064750)
chr3 (254-299)||(10066927-10066972)
chr3 (25-130)||(23198242-23198346)
chr3 (25-130)||(23200441-23200545)
chr3 (254-303)||(32143870-32143919)
chr3 (254-298)||(27985971-27986015)
chr3 (253-304)||(6718295-6718346)
chr3 (43-86)||(44331360-44331403)
chr3 (253-304)||(45282592-45282643)
chr3 (102-203)||(3393292-3393393)
chr3 (254-304)||(3617041-3617091)
chr3 (254-304)||(10208785-10208835)
chr3 (254-304)||(10210985-10211035)
chr3 (254-304)||(18656972-18657022)
chr3 (254-304)||(54634717-54634767)
chr3 (263-303)||(1306555-1306595)
chr3 (20-84)||(26928290-26928354)
[»] chr6 (63 HSPs)
chr6 (20-315)||(5016965-5017261)
chr6 (20-312)||(18234415-18234708)
chr6 (24-312)||(31085945-31086235)
chr6 (49-299)||(31979878-31980128)
chr6 (20-313)||(10076663-10076956)
chr6 (25-202)||(24435555-24435732)
chr6 (102-299)||(5571761-5571947)
chr6 (26-211)||(22964037-22964221)
chr6 (26-211)||(23824172-23824356)
chr6 (70-247)||(21593090-21593267)
chr6 (102-213)||(9183391-9183502)
chr6 (20-191)||(5757072-5757243)
chr6 (97-291)||(603613-603809)
chr6 (24-176)||(5406502-5406654)
chr6 (24-176)||(5410827-5410979)
chr6 (25-211)||(21272563-21272749)
chr6 (21-274)||(33211486-33211737)
chr6 (46-312)||(24714730-24714997)
chr6 (20-143)||(31404974-31405096)
chr6 (20-176)||(33160654-33160810)
chr6 (20-176)||(30834836-30834993)
chr6 (24-208)||(5411537-5411721)
chr6 (73-191)||(26661429-26661547)
chr6 (73-191)||(26767400-26767518)
chr6 (24-208)||(5407212-5407396)
chr6 (24-148)||(16452633-16452756)
chr6 (20-84)||(5571945-5572009)
chr6 (43-176)||(16452762-16452896)
chr6 (237-305)||(5343990-5344058)
chr6 (252-304)||(14737092-14737144)
chr6 (106-203)||(3809312-3809406)
chr6 (253-304)||(5266595-5266646)
chr6 (102-176)||(5413829-5413904)
chr6 (254-304)||(11857510-11857560)
chr6 (254-304)||(14741933-14741983)
chr6 (254-312)||(16839273-16839331)
chr6 (254-304)||(22010196-22010246)
chr6 (66-148)||(26954648-26954730)
chr6 (254-304)||(30125025-30125075)
chr6 (254-312)||(33329932-33329990)
chr6 (255-304)||(6026841-6026890)
chr6 (254-314)||(6005949-6006009)
chr6 (264-312)||(33335429-33335477)
chr6 (254-304)||(6136490-6136540)
chr6 (235-313)||(21272460-21272538)
chr6 (102-191)||(23896746-23896836)
chr6 (234-303)||(22709567-22709636)
chr6 (256-305)||(28155096-28155145)
chr6 (254-299)||(34166678-34166723)
chr6 (263-303)||(5674238-5674278)
chr6 (254-306)||(6439026-6439078)
chr6 (20-84)||(9183331-9183393)
chr6 (20-84)||(23896684-23896748)
chr6 (257-299)||(411698-411740)
chr6 (254-304)||(16579044-16579094)
chr6 (254-304)||(16616286-16616336)
chr6 (254-312)||(23896899-23896957)
chr6 (254-304)||(33342631-33342681)
chr6 (254-299)||(13150861-13150906)
chr6 (132-213)||(17759413-17759494)
chr6 (255-299)||(27647480-27647524)
chr6 (255-299)||(34151840-34151884)
chr6 (255-299)||(34164456-34164500)
[»] chr8 (66 HSPs)
chr8 (20-312)||(5701951-5702245)
chr8 (20-249)||(15212425-15212654)
chr8 (109-314)||(4456429-4456635)
chr8 (20-211)||(43036101-43036291)
chr8 (20-211)||(30143020-30143210)
chr8 (72-247)||(19175270-19175445)
chr8 (23-149)||(23799212-23799338)
chr8 (26-211)||(4743498-4743684)
chr8 (22-211)||(4731336-4731524)
chr8 (20-208)||(12702938-12703126)
chr8 (193-312)||(23799091-23799210)
chr8 (70-211)||(42435558-42435699)
chr8 (20-191)||(34254628-34254799)
chr8 (24-143)||(33351896-33352014)
chr8 (20-176)||(17982365-17982521)
chr8 (20-203)||(1746518-1746701)
chr8 (92-225)||(11383453-11383585)
chr8 (20-203)||(34256804-34256987)
chr8 (92-208)||(40221227-40221343)
chr8 (25-203)||(10014845-10015023)
chr8 (97-237)||(22975969-22976108)
chr8 (87-211)||(27810976-27811100)
chr8 (20-191)||(31217954-31218125)
chr8 (20-88)||(4696305-4696373)
chr8 (87-211)||(4733503-4733627)
chr8 (20-120)||(7412672-7412771)
chr8 (106-176)||(4283041-4283111)
chr8 (20-176)||(19948621-19948777)
chr8 (20-79)||(4456360-4456419)
chr8 (106-163)||(4696250-4696307)
chr8 (66-211)||(1345714-1345860)
chr8 (252-304)||(10688625-10688677)
chr8 (254-306)||(39784330-39784382)
chr8 (20-141)||(3051453-3051574)
chr8 (254-304)||(4759541-4759591)
chr8 (254-312)||(7412894-7412952)
chr8 (254-304)||(10683746-10683796)
chr8 (254-304)||(18870028-18870078)
chr8 (102-203)||(19945720-19945822)
chr8 (254-304)||(25327671-25327721)
chr8 (254-304)||(30656225-30656275)
chr8 (254-304)||(33037294-33037344)
chr8 (254-312)||(35745921-35745979)
chr8 (254-304)||(36979957-36980007)
chr8 (255-304)||(3439095-3439144)
chr8 (21-78)||(19175458-19175515)
chr8 (23-79)||(27811088-27811143)
chr8 (253-304)||(25689568-25689619)
chr8 (254-304)||(6311878-6311928)
chr8 (254-304)||(15290150-15290200)
chr8 (254-304)||(15470519-15470569)
chr8 (254-304)||(18852634-18852684)
chr8 (257-299)||(31042921-31042963)
chr8 (102-203)||(42497900-42498002)
chr8 (254-304)||(42575852-42575902)
chr8 (20-176)||(44303566-44303722)
chr8 (20-84)||(4733610-4733675)
chr8 (172-247)||(33351812-33351888)
chr8 (234-285)||(4282951-4283002)
chr8 (257-303)||(2627327-2627373)
chr8 (254-304)||(7289434-7289484)
chr8 (257-299)||(26288462-26288504)
chr8 (257-299)||(26301719-26301761)
chr8 (257-299)||(26313713-26313755)
chr8 (20-84)||(19945660-19945722)
chr8 (20-84)||(42498000-42498062)
[»] scaffold0066 (1 HSPs)
scaffold0066 (20-211)||(20715-20905)
[»] scaffold0087 (3 HSPs)
scaffold0087 (20-211)||(36406-36597)
scaffold0087 (20-314)||(43432-43726)
scaffold0087 (266-313)||(36323-36370)
[»] scaffold0036 (2 HSPs)
scaffold0036 (165-312)||(86066-86212)
scaffold0036 (23-87)||(86018-86082)
[»] scaffold0014 (1 HSPs)
scaffold0014 (70-241)||(80850-81021)
[»] scaffold0286 (1 HSPs)
scaffold0286 (70-274)||(10954-11159)
[»] scaffold0098 (2 HSPs)
scaffold0098 (28-211)||(45539-45722)
scaffold0098 (254-303)||(45746-45795)
[»] scaffold0176 (2 HSPs)
scaffold0176 (87-211)||(17630-17754)
scaffold0176 (25-88)||(17589-17651)
[»] scaffold0466 (1 HSPs)
scaffold0466 (70-176)||(6822-6929)
[»] scaffold0002 (1 HSPs)
scaffold0002 (24-203)||(434217-434397)
[»] scaffold0140 (2 HSPs)
scaffold0140 (20-176)||(8026-8182)
scaffold0140 (257-303)||(7920-7966)
[»] scaffold1455 (1 HSPs)
scaffold1455 (254-306)||(1714-1766)
[»] scaffold0665 (1 HSPs)
scaffold0665 (252-304)||(8214-8266)
[»] scaffold0464 (1 HSPs)
scaffold0464 (254-306)||(888-940)
[»] scaffold0355 (1 HSPs)
scaffold0355 (254-304)||(3344-3394)
[»] scaffold0135 (1 HSPs)
scaffold0135 (254-304)||(34561-34611)
[»] scaffold0016 (1 HSPs)
scaffold0016 (42-187)||(114288-114433)
[»] scaffold0510 (2 HSPs)
scaffold0510 (102-191)||(1204-1294)
scaffold0510 (254-312)||(1083-1141)
[»] scaffold0491 (2 HSPs)
scaffold0491 (257-303)||(9253-9299)
scaffold0491 (257-303)||(11698-11744)
[»] scaffold0197 (1 HSPs)
scaffold0197 (254-312)||(18663-18721)
[»] scaffold0188 (1 HSPs)
scaffold0188 (257-303)||(17440-17486)
[»] scaffold0259 (1 HSPs)
scaffold0259 (254-305)||(1745-1796)
[»] scaffold0028 (1 HSPs)
scaffold0028 (254-305)||(148450-148501)
[»] scaffold1519 (1 HSPs)
scaffold1519 (20-130)||(666-775)
[»] scaffold0674 (1 HSPs)
scaffold0674 (254-304)||(4253-4303)
[»] scaffold0565 (1 HSPs)
scaffold0565 (254-304)||(3128-3178)
[»] scaffold0137 (1 HSPs)
scaffold0137 (254-304)||(5866-5916)


Alignment Details
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 20 - 331
Target Start/End: Complemental strand, 36314995 - 36314684
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  36314995 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgac 36314896  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| || ||| ||||||     
T  36314895 ccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcatcctgagaaact 36314796  T
Q  220 atgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaaaacaa 319  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  36314795 atgctccctgcctgaaaatcgtgacacgttgatgaaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagctaatttacaacaaaaacaa 36314696  T
Q  320 tcaacattaata 331  Q
    ||||||||||||    
T  36314695 tcaacattaata 36314684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 20 - 331
Target Start/End: Complemental strand, 36329204 - 36328893
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  36329204 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgac 36329105  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| || ||| ||||||     
T  36329104 ccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcatcctgagaaact 36329005  T
Q  220 atgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaaaacaa 319  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  36329004 atgctccctgcctgaaaatcgtgacacgttgatgaaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagctaatttacaacaaaaacaa 36328905  T
Q  320 tcaacattaata 331  Q
    ||||||||||||    
T  36328904 tcaacattaata 36328893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 20 - 305
Target Start/End: Original strand, 54867511 - 54867796
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||| |||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||     
T  54867511 ctctcctccaaaatctgcacaagaacacttatatagtagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgat 54867610  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||| || ||| | |||||    
T  54867611 ccaaggtacgaccaaccttatccgaaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaattgtgacacgattgagcatcctgaaaaacc 54867710  T
Q  220 atgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatt 305  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  54867711 atgctcgctgcccgaaaatcgtgacacgttgatgaaatcgtgtcacgacttctctattcttccaaaccacaaatttgaagccaatt 54867796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 20 - 290
Target Start/End: Complemental strand, 25861798 - 25861527
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| |  ||||||||||||| ||| |||| |||||||||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  25861798 ctctccttcaaaatctgcaaagaaacacttatatagaagtcttcaactgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacgac 25861699  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatg-ttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||| |||||| | || |    
T  25861698 ccaaggtacgaccaaccttatcctgaaaacatgcccagcaagttgaaaatcgtgtcacgtttttcccaaaatcgtgacacgattgagcaccctgaaaagc 25861599  T
Q  219 catgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccaca 290  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||| |||| ||||| ||||    
T  25861598 catgctcactgcctggaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttctcccaaaacaca 25861527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 20 - 312
Target Start/End: Complemental strand, 16623058 - 16622766
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||  |||| |||||||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  16623058 ctctccttcaaaatctgcacaaaaacacttatatagcagccttcacctgtcaaaatcgtgtcacgttt-tccaaatcgtgacacgattggtgcgtacgac 16622960  T
Q  120 ccaaggtacgatcaaccttatcct-aaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaa 217  Q
    ||||||||||| |||||||||||| |||||| | || |||||| ||||||||||||||| |||||||||||||  |||||| ||||| |||  |   |||    
T  16622959 ccaaggtacgaccaaccttatcctgaaaaacgtacctagcaagtttgaaaatcgtgtcacgttttcccaaaattgtgacacaattgagcacaat-gcaaa 16622861  T
Q  218 ccatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||||| || |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| |||||||    
T  16622860 ccatgctcactacctgaaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaatatacaaca 16622766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 20 - 312
Target Start/End: Complemental strand, 16628637 - 16628345
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||| |||| ||||||||||||||||  |||| |||||||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  16628637 ctctccttcaaaatctgaacaaaaacacttatatagcagccttcatctgtcaaaatcgtgtcacgttt-tccaaatcgtgacacgattggtgcgtacgac 16628539  T
Q  120 ccaaggtacgatcaaccttatcctaaaaaca-tgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaa 217  Q
    ||||||||||| |||||||||| | |||| | |  | |||||||| ||||||||||||| |||||||||||||| |||||||||||| ||||||   |||    
T  16628538 ccaaggtacgaccaaccttatcatgaaaaaagtaacaagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgc-aaa 16628440  T
Q  218 ccatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
     ||||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  16628439 gcatgctcactgcctgaaaatcgtgacacattgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaaca 16628345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 24 - 312
Target Start/End: Original strand, 3777885 - 3778173
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaa 123  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||||||||| ||||| |||| ||||||  |||  ||||||||||||||||||||||    
T  3777885 ccttcaaaatctgcacaagaacatttatatagcagtcttcagctgtcaaaatcatgtcaagttt-tccaaaacgtggcacgattggtgcgtacgacccaa 3777983  T
Q  124 ggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatg 222  Q
    ||||||| |||||||||| | ||||| | || ||||| || ||||||||||||| |||||||||||||| |||||||||||| ||||||   ||||||||    
T  3777984 ggtacgaccaaccttatcttgaaaacgtaccgagcaaatttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgc-aaaccatg 3778082  T
Q  223 ctctctgcctg-aaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||| |||| || |||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  3778083 ctcgctgcttggaaaatcgtgacacgttgatgtaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaaca 3778173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 20 - 239
Target Start/End: Complemental strand, 5268965 - 5268745
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  5268965 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgac 5268866  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| ||||| | |||| |||| ||||||||||||||| |||||||||||||| |||||||||||| |||||| | ||||    
T  5268865 ccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgaaaaac 5268766  T
Q  219 catgctctctgcctgaaaatc 239  Q
    ||||||| |||||||||||||    
T  5268765 catgctcgctgcctgaaaatc 5268745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 38152197 - 38151909
Alignment:
Q  26 ttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaagg 125  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||| ||| | |||| ||| | ||||||| ||||||||| ||||||    
T  38152197 ttcaaaatctgcacaggaacacttatatagcagtattcagctgtcaaaatcgtgtcacattttttcaaaatgtaaaacgattgatgcgtacgatccaagg 38152098  T
Q  126 tacgatcaaccttatcc-taaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgc 223  Q
    ||||| |||||||||||  |||||| |  |||||||| |||||||| |||||| ||||||||||| |  |||||||||||| ||||||   ||||| | |    
T  38152097 tacgaccaaccttatccggaaaaacgtatccagcaagtttgaaaattgtgtcacgttttcccaaatttgtgacacgattgagcaccct-gcaaaccgtac 38151999  T
Q  224 tctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
    || ||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  38151998 tcactgcctggaaattgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaacaa 38151909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 20 - 312
Target Start/End: Complemental strand, 6743180 - 6742888
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||| |||||||||| |||||| ||||  |||||| |||| |||||| ||||||||| |    
T  6743180 ctctacttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcaagttttcccaaatcgtgacacgattagtgcgtacgtc 6743081  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| |||||||||||| ||||| |||||| |||||| |||||||||||| |||||||||||| | || |||||||   |||||| | ||||     
T  6743080 ccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagtttaaaatcgtgtcacgttttcccaaaaacgtgccacgattaggcaccctgaaaaac- 6742982  T
Q  220 atgctctctgcct--gaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
      ||||||  | |   |||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  6742981 -agctctcgacgttgcaaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaatttacaaca 6742888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 20 - 312
Target Start/End: Complemental strand, 5396436 - 5396164
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||||                    |||||||||||||||    
T  5396436 ctctccttcaaaatctgctcaagaacacttatatagcagtcttcagctgtcaaaatcgtggcacg--------------------attggtgcgtacgac 5396357  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    |||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||| ||||| |||||||| |||||||||||| || ||| ||||||    
T  5396356 ccaaggtacgatcaaccttatcctgaaaacatacccaacaagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattgagcaacctgagaaac 5396257  T
Q  219 catgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||||||| |||| |||||||| ||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| ||||| |||||    
T  5396256 catgctccctgcttgaaaatcatgacacgttgatgaaatcgtg-cacgatttctctgttctttcaaaccacaaatttgaagctaattttcaaca 5396164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 20 - 304
Target Start/End: Original strand, 10047713 - 10047982
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||     || |||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  10047713 ctctccttcaaaatctgcacaagaacacttata-----gtcttcaactgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgac 10047807  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct-aagaaa 217  Q
    |            ||||||||||| ||||| | |||| |||||| | ||||||||||| |||||||||||||| ||||||| |||| |||||| || |||    
T  10047808 c------------aaccttatcctgaaaacgtacccatcaagtttgcaaatcgtgtcacgttttcccaaaatcgtgacacggttgagcaccctgaaaaaa 10047895  T
Q  218 ccatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||| |||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  10047896 ccatgctcgctgcctggaaatcgcgacacgttgatgaaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaat 10047982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 8689261 - 8689079
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||  ||||||||||||||||||    
T  8689261 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt-tccaaatcgtggcacgattggtgcgtacgac 8689163  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgatt 202  Q
    ||||||||||| |||||||||||| ||||| | ||||||||| ||||||||||||||| |||||||||||||| || |||||||    
T  8689162 ccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgtcacgatt 8689079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 20 - 313
Target Start/End: Original strand, 5148010 - 5148303
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| || | |||  || |||||||||||||| | ||||| |||| ||||||||||||||||||    
T  5148010 ctctccttcaaaatctgcacaagaacacttatatagcagtcttaaactgataagatcgtgtcacgttt-tgcaaatcgtgacacgattggtgcgtacgac 5148108  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| ||||| |  |||| ||| ||||||||||||||| |||||| ||||||| || ||||||||  ||||||  | ||     
T  5148109 ccaaggtacgaccaaccttatcctgaaaacgtatccagtaagtttgaaaatcgtgtcaagttttcacaaaatcgtgccacgattggtcaccct--gcaaa 5148206  T
Q  219 catgctctctgcct--gaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
    |  |||| |  | |   ||||||||| |||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5148207 ctagctcacgacattgcaaaatcgtgtcacggtgataaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaattttcaacaa 5148303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 34570714 - 34570894
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || ||||| ||||||| ||| |||||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||    
T  34570714 ctctccttcaaaatctgca-aagaacacatatatagtagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgac 34570812  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgat 201  Q
    ||||||||| | |||||||||||| ||||| || ||||||||  ||||||||||||| |||||||||||||| || ||||||    
T  34570813 ccaaggtacaaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 34570894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 212
Target Start/End: Complemental strand, 37740494 - 37740303
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||  |||||| |||| ||  |||||| |||||||    
T  37740494 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacatttggtgtgtacgac 37740396  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacacccta 212  Q
    ||||||||||| |||||||||||| ||||| ||||| |||||  ||||||| ||||| |||||||||||||| ||  |||||||  |||||||    
T  37740395 ccaaggtacgaccaaccttatcctgaaaacttgccctgcaagccgaaaatcatgtcacgttttcccaaaatcgtgttacgattgggcacccta 37740303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 5429547 - 5429358
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||  |||||| || |||||||||||||||||||||||| ||||||||||||||| ||||  ||| || |||| ||||||||||||||||||    
T  5429547 ctctccttcaaggtctgca-aagaacacttatatagcagttttcagc-gtcaaaatcgtgtcatgttttcccacatcgtgacacgattggtgcgtacgac 5429450  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||||||||| ||| |||| ||| ||||| || ||| |||| |||||||||| ||| |||||||||||||| || |||||||  |||||||    
T  5429449 ccaaggtacgaccaatcttaacctgaaaacttgtccaacaagctgaaaatcgtatcacgttttcccaaaatcgtgtcacgattagacaccct 5429358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 5143592 - 5143776
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctg-tcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacga 118  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||  | | ||||||||||||||||| ||||||| |||| |||||||||||| || |    
T  5143592 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagtagataaaaatcgtgtcacgttt-tccaaatcgtgacacgattggtgcgcacaa 5143690  T
Q  119 cccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    |||||||| ||| |||||||||||| ||||| | |||| |||| |||||||||||||||  ||||| ||||||| || ||||||||    
T  5143691 cccaaggtgcgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacattttcacaaaatcgtgccacgattg 5143776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 70 - 245
Target Start/End: Complemental strand, 26363866 - 26363691
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||||| ||  ||||||||||| ||| |||||||||||||||||||||| || |||||||||||| ||||| ||| |||||||  ||||||    
T  26363866 caaaatcgtgtcacgatttcccaaattgtgacacgtttggtgcgtacgacccaaggtatgaccaaccttatcctgaaaacttgctcagcaagccgaaaat 26363767  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcct-gaaaatcgtgaca 245  Q
    ||||||| |||||||||||||| || |||||||| ||||||||| |||| ||| || ||||||  ||||||||||||    
T  26363766 cgtgtcacgttttcccaaaatcgtgtcacgattggacaccctaa-aaacaatgttcactgcctaaaaaatcgtgaca 26363691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 70 - 247
Target Start/End: Original strand, 27417518 - 27417696
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||||| ||  |||||| |||| ||| ||| ||||||||||||||||||||| |||||||||||| ||| | |||| | ||||||||||||    
T  27417518 caaaatcgtgtcacgatttcccaaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaccgtgccgaacaagttgaaaat 27417617  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcctg-aaaatcgtgacacg 247  Q
    ||||||| |||||||||||||| || |||||||||||||   ||| |||||||||| || ||||  |||||||||||||    
T  27417618 cgtgtcacgttttcccaaaatcgtgtcacgattgaacacatcaaggaaccatgctcactacctgccaaatcgtgacacg 27417696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 70 - 247
Target Start/End: Complemental strand, 41639166 - 41638988
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||| | ||  |||||| |||| ||  ||| ||||||||||||||||||||| |||||||||||| ||||| |||||| ||||||||||||    
T  41639166 caaaatcgtgtcatggtttcccaaatcgtgacacagttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagttgaaaat 41639067  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcctg-aaaatcgtgacacg 247  Q
    ||||||| ||||| |||||||| || |||||||||||||  |||| ||||||| || |||||||  |||||||||||||    
T  41639066 cgtgtcacgtttttccaaaatcgtgtcacgattgaacactttaaggaaccatgttcactgcctgccaaatcgtgacacg 41638988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 22 - 211
Target Start/End: Original strand, 9927759 - 9927951
Alignment:
Q  22 ctccttcaaaatctgcacaataacacttatatagcagttttca---gctgtcaaaatc-gtgtcacgtttgtccaaattgtgatacgattggtgcgtacg 117  Q
    ||||||||||||||||| |  ||||||||| ||||||| ||||   |||| ||||||  |||||||||||  |||||| |||| ||| ||||||||||||    
T  9927759 ctccttcaaaatctgcagag-aacacttatttagcagtcttcatcagctgccaaaatttgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacg 9927857  T
Q  118 acccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    |||||||| |||| |||||||||||| ||||| || ||||||||  |||||||||||||  ||||||||||||| || ||||||||||||||||    
T  9927858 acccaaggaacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacattttcccaaaatcgtgtcacgattgaacaccct 9927951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 29254358 - 29254207
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaa 123  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| ||| ||||||||||||| ||||    
T  29254358 ccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacgatccaa 29254260  T
Q  124 ggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
      ||||| ||||||||| || || || |||||| ||||  ||||||| |||||    
T  29254259 aatacgaccaaccttattctgaatacttgcccaacaagccgaaaatcatgtca 29254207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 87 - 211
Target Start/End: Original strand, 12745782 - 12745907
Alignment:
Q  87 tgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatccta-aaaacatgcccagcaagttgaaaatcgtgtcatgttttccc 185  Q
    |||| |||| |||| |||||||| |||||||||||||||||||| ||||||||||||  ||||| |||||||||||  ||||||||||||| ||||||||    
T  12745782 tgtcaaaatcgtgacacgattggcgcgtacgacccaaggtacgaccaaccttatcctggaaaacttgcccagcaagccgaaaatcgtgtcacgttttccc 12745881  T
Q  186 aaaatcatgacacgattgaacaccct 211  Q
    ||||||||| |||||||| |||||||    
T  12745882 aaaatcatgtcacgattggacaccct 12745907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 54200228 - 54200361
Alignment:
Q  43 aacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcc 142  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||  |||||| ||||   | ||||||||||||||||||||||||| ||||||||||     
T  54200228 aacacttatatagcagtcttcagctatcaaaatcgtgtcacattttcccaaatcgtgactagtttggtgcgtacgacccaaggtacgaccaaccttatct 54200327  T
Q  143 taaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    | ||||| |||||||||||  |||||||||||||    
T  54200328 tgaaaacttgcccagcaagccgaaaatcgtgtca 54200361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 70 - 274
Target Start/End: Complemental strand, 6655557 - 6655352
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||||| ||  |||||| |||| ||| |||||||||||||||||| |||||| |||||||||||| ||||| ||||||||||   ||||||    
T  6655557 caaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaat 6655458  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcct--gaaaatcgtgacacgttgatgaaatcgtgccacga 267  Q
    |||||||  ||| ||||||||| || |||||||| |||||||   ||| ||||||| | || |   ||||||||||||||   ||||||||||| |||||    
T  6655457 cgtgtcacatttccccaaaatcgtgtcacgattggacaccct-gcaaaacatgctcacggcattgcaaaatcgtgacacgcctatgaaatcgtgtcacga 6655359  T
Q  268 tttctct 274  Q
    |||||||    
T  6655358 tttctct 6655352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 376 - 446
Target Start/End: Complemental strand, 36314641 - 36314571
Alignment:
Q  376 caaataatatcttacacaacttcattcactctacaaattgaaaagtttgtttgtcaattccctcttctttt 446  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36314641 caaaaaatatcttacacaacttcattcactctacaaattgaaaagtttgtttgtcaattccctcttctttt 36314571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 376 - 446
Target Start/End: Complemental strand, 36328850 - 36328780
Alignment:
Q  376 caaataatatcttacacaacttcattcactctacaaattgaaaagtttgtttgtcaattccctcttctttt 446  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36328850 caaaaaatatcttacacaacttcattcactctacaaattgaaaagtttgtttgtcaattccctcttctttt 36328780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 70 - 208
Target Start/End: Complemental strand, 40630585 - 40630447
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||||| ||  |||||| |||| ||| ||||||| || |||||||||||||| ||||||||| || ||||  |||| |||||| |||||||    
T  40630585 caaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcatatgacccaaggtacgaccaaccttattctgaaaatgtgcctagcaagctgaaaat 40630486  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacac 208  Q
    ||||||| |||||||||||||| ||||||||||| ||||    
T  40630485 cgtgtcacgttttcccaaaatcgtgacacgattggacac 40630447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 90 - 208
Target Start/End: Original strand, 50674433 - 50674551
Alignment:
Q  90 ccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaa 189  Q
    |||||| |||| ||| ||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||| |||||||| ||||| ||||||||||||    
T  50674433 ccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacgtgcccagcaagctgaaaatcatgtcacgttttcccaaaa 50674532  T
Q  190 tcatgacacgattgaacac 208  Q
    || | ||||||||| ||||    
T  50674533 tcgtaacacgattggacac 50674551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 54882605 - 54882480
Alignment:
Q  106 ttggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaa 205  Q
    |||||||||||||||||||||||||||||||||||||| ||||| || ||| ||||  ||||||||||||| |||||||||||||| || |||||||| |    
T  54882605 ttggtgcgtacgacccaaggtacgatcaaccttatcctgaaaacgtgtccaacaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattgga 54882506  T
Q  206 caccctaagaaaccatgctctctgcct 232  Q
    ||||||   ||||||||||| ||||||    
T  54882505 caccct-gcaaaccatgctcactgcct 54882480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 23 - 211
Target Start/End: Original strand, 52095665 - 52095851
Alignment:
Q  23 tccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaa-attgtgatacgattggtgcgtacgaccc 121  Q
    ||||||||||||| || || ||||||||||||||||| |||||| ||| |||||||  ||||||| ||| | || |||  ||||||| ||| ||||||||    
T  52095665 tccttcaaaatctaca-aagaacacttatatagcagtcttcagc-gtcgaaatcgt--cacgtttttcctatatcgtgtcacgattgatgcttacgaccc 52095760  T
Q  122 aaggtacgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||||||| |||||||||||| |||| | |||||||||||   |||||||||||| |||||||||||||| || |||||||| |||||||    
T  52095761 aaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccct 52095851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 26175936 - 26176093
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||  | ||||  ||| ||| ||||||||||||||    
T  26175936 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgctaaatcatgacacgtttggtgcgtacgac 26176034  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaat 190  Q
                |||||||||||| ||||| |||||| ||||  ||||||||||||| |||||||||||||    
T  26176035 ------------caaccttatcctgaaaacttgcccatcaagccgaaaatcgtgtcacgttttcccaaaat 26176093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 35662077 - 35661902
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||| |||||||||||| || ||||||||||||||||| ||||| ||||||||| || ||||||||  |||||| |||| ||| ||||||||||||||    
T  35662077 ctctccatcaaaatctgca-aagaacacttatatagcagtcttcagttgtcaaaattgtatcacgttttgccaaatcgtgacacggttggtgcgtacgac 35661979  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacac 208  Q
                |||||||||||| ||||| |||||| ||||  |||||||||| ||  ||||||||||||| || |||||||| ||||    
T  35661978 ------------caaccttatcctgaaaacgtgcccaacaagccgaaaatcgtgacacattttcccaaaatcgtgtcacgattggacac 35661902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 46570115 - 46570226
Alignment:
Q  92 aaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatc 191  Q
    |||| |||| ||| ||| |||||||||||||| |||||| |||||||||||| ||||  |||||||||||  |||||| |||||| ||||||||||||||    
T  46570115 aaatcgtgacacgtttgatgcgtacgacccaaagtacgaccaaccttatcctgaaaatttgcccagcaagccgaaaattgtgtcacgttttcccaaaatc 46570214  T
Q  192 atgacacgattg 203  Q
     || ||||||||    
T  46570215 ttgtcacgattg 46570226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 12739855 - 12739949
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacc 120  Q
    |||||||||||| | || ||||||||||||||||| |||||||||||||||||||||||||||  | ||||  | | |||||||||||||||||||    
T  12739855 cttcaaaatctgta-aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttccaaaatcataacacgattggtgcgtacgacc 12739949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 12748061 - 12748155
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacc 120  Q
    |||||||||||| | || ||||||||||||||||| |||||||||||||||||||||||||||  | ||||  | | |||||||||||||||||||    
T  12748061 cttcaaaatctgta-aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttccaaaatcataacacgattggtgcgtacgacc 12748155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 52082960 - 52083113
Alignment:
Q  23 tccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcc-aaattgtgatacgattggtgcgtacgaccc 121  Q
    ||||||||||| |||| || ||||||||||||| ||| |||||| ||| |||||||||||||||| ||| |||| |||  ||||||| ||| ||||||||    
T  52082960 tccttcaaaatttgca-aagaacacttatataggagtcttcagc-gtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcttacgaccc 52083057  T
Q  122 aaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    |||||| || |||||||||||| |||| | |||||| ||||   ||||||||||||    
T  52083058 aaggtatgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtca 52083113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 52093967 - 52094120
Alignment:
Q  23 tccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcc-aaattgtgatacgattggtgcgtacgaccc 121  Q
    ||||||||||| |||| || ||||||||||||| ||| |||||| ||| |||||||||||||||| ||| |||| |||  ||||||| ||| ||||||||    
T  52093967 tccttcaaaatttgca-aagaacacttatataggagtcttcagc-gtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcttacgaccc 52094064  T
Q  122 aaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    |||||| || |||||||||||| |||| | |||||| ||||   ||||||||||||    
T  52094065 aaggtatgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtca 52094120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 5143809 - 5143867
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  5143809 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 5143867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 8689094 - 8689042
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaattt 306  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  8689094 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattt 8689042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 5268740 - 5268690
Alignment:
Q  263 cacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  5268740 cacgatttctctgttcttccaaaccacaaatttgaagccaattaacaacaa 5268690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 36994359 - 36994241
Alignment:
Q  90 ccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaa 189  Q
    |||||| |||| ||| ||||||||||||||| ||||||||||||||||||||   ||||| |||| ||||||  |||||| ||| || ||||||| ||||    
T  36994359 ccaaatcgtgacacggttggtgcgtacgacctaaggtacgatcaaccttatctagaaaacgtgcctagcaagccgaaaattgtgacacgttttccaaaaa 36994260  T
Q  190 tcatgacacgattgaacac 208  Q
    |  || |||||||| ||||    
T  36994259 ttgtgtcacgattggacac 36994241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 18860464 - 18860524
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaaa 315  Q
    |||||||| |||||||||||| |||||||| |||||||||||||||||||||| ||||||||    
T  18860464 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaattt-caacaaaa 18860524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 30000105 - 30000212
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacga 118  Q
    ||||||||||||||||||| || ||||||||||||||| | |||||| ||| |||||||||||| ||| |||  ||| |||  ||||||| |||||||||    
T  30000105 ctctccttcaaaatctgcaaaa-aacacttatatagcaatcttcagc-gtcgaaatcgtgtcacatttttccccaatcgtgccacgattgatgcgtacga 30000202  T
Q  119 cccaaggtac 128  Q
    ||||||||||    
T  30000203 cccaaggtac 30000212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 176
Target Start/End: Complemental strand, 31985394 - 31985242
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaag 124  Q
    ||||||||||||||||| |||||||| |||  ||| |||| |||  ||||||||| |||| || ||||||| |||  ||||||| |||||||| | ||||    
T  31985394 cttcaaaatctgcacaagaacacttaaatactagtcttcaactgataaaatcgtgccacgatt-tccaaatcgtgtcacgattgatgcgtacgtcacaag 31985296  T
Q  125 gtacgatca-accttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtca 176  Q
    |||||| ||  ||||||||| ||||| |  |||||||| |||||||||||||||    
T  31985295 gtacgaccagtccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtca 31985242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 18856252 - 18856304
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaattt 306  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  18856252 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaattt 18856304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 189
Target Start/End: Original strand, 50263265 - 50263383
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||||| ||  |||||  |||| ||  ||||||||||||||| ||||||||| ||||||||| || ||||| | |||| ||||  ||||||    
T  50263265 caaaatcgtgtcacgatttcccaaaccgtgacacatttggtgcgtacgacc-aaggtacgaccaaccttattctgaaaacttacccaccaagccgaaaat 50263363  T
Q  170 cgtgtcatgttttcccaaaa 189  Q
    ||||| | ||||||||||||    
T  50263364 cgtgttacgttttcccaaaa 50263383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 3814548 - 3814598
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  3814548 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 3814598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 9194158 - 9194224
Alignment:
Q  248 ttgatgaaatcgtgccacgatttctctattcttcc-aaaccacaaatttgaagccaatttacaacaa 313  Q
    |||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||  |||||||    
T  9194158 ttgatgaaatcgtgtcacaatttctctgttcttccaaaaccacaaatttgaagccaataaacaacaa 9194224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 9223956 - 9223906
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  9223956 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 9223906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 9228743 - 9228693
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  9228743 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 9228693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 12745741 - 12745794
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtg 79  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||||||||||    
T  12745741 cttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaatcgtg 12745794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 24742520 - 24742570
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  24742520 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 24742570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 51520993 - 51521043
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  51520993 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 51521043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 56141568 - 56141518
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  56141568 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 56141518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 202
Target Start/End: Complemental strand, 3909919 - 3909784
Alignment:
Q  66 ctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttga 165  Q
    ||||||||||| ||||||||||    |||| |||| ||| ||| |||||||||| |||||||||| ||||||||| || ||||| |||| | || |   |    
T  3909919 ctgtcaaaatcatgtcacgttttctaaaatcgtgacacggttgatgcgtacgactcaaggtacgaccaaccttat-cttaaaacgtgccaaacatgccaa 3909821  T
Q  166 aaatcgtgtcatgttttcccaaaatcatgacacgatt 202  Q
    |||| |||||||||||||| |||||| || |||||||    
T  3909820 aaatagtgtcatgttttccaaaaatcgtgtcacgatt 3909784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 45347374 - 45347322
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaattt 306  Q
    |||||||| |||||||||| | |||||||| ||||||||||||||||||||||    
T  45347374 aaatcgtgtcacgatttctttgttcttccagaccacaaatttgaagccaattt 45347322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 300
Target Start/End: Original strand, 29761181 - 29761228
Alignment:
Q  253 gaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagc 300  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||||    
T  29761181 gaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 29761228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 2209266 - 2209188
Alignment:
Q  125 gtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    |||||| |||||||||||| ||||| |||| |||||   ||||||||||||| |||| ||||||||| || ||||||||    
T  2209266 gtacgaccaaccttatcctgaaaacttgcctagcaaaccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgattg 2209188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 13992824 - 13992870
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||    
T  13992824 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 13992870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 28468032 - 28467986
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||    
T  28468032 tcgtgtcacgatttctctgttcttccataccacaaatttgaagccaa 28467986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 48142904 - 48142810
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgt-ccaaattgtgatacgattggtgcgtacgacc 120  Q
    |||||||| ||||| || ||||||||||||||||  |||||| ||| |||||||||||||||| | |||||| |||  ||||||| |||||||||||    
T  48142904 cttcaaaaactgca-aagaacacttatatagcagacttcagc-gtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcgtacgacc 48142810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 149
Target Start/End: Complemental strand, 24968933 - 24968850
Alignment:
Q  66 ctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaac 149  Q
    ||||||| ||||||||||| ||| | ||||  ||  |||||||  ||||||||||||| |||||| |||||||||||| |||||    
T  24968933 ctgtcaatatcgtgtcacgattggcaaaatcatgtcacgattgaagcgtacgacccaatgtacgaccaaccttatcctgaaaac 24968850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 39774031 - 39773976
Alignment:
Q  92 aaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaa 147  Q
    ||||||||  ||||||| |||||| |||||||||||||| ||||||||||| ||||    
T  39774031 aaattgtgtcacgattgatgcgtatgacccaaggtacgaccaaccttatccaaaaa 39773976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 56179028 - 56179107
Alignment:
Q  125 gtacgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    |||||| |||||||||||| |||| | |||||||||||   |||||| ||||| |||||||||||||| || ||||||||    
T  56179028 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcatgtcacgttttcccaaaatcgtgtcacgattg 56179107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 5135706 - 5135656
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || ||||||||| |||||||||||||| ||||    
T  5135706 aaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaat 5135656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 5137932 - 5137882
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || ||||||||| |||||||||||||| ||||    
T  5137932 aaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaat 5137882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 5370387 - 5370451
Alignment:
Q  21 tctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgttt 87  Q
    |||||||||||||||||| || |||||||||||||  || |||||| ||| ||||||||||||||||    
T  5370387 tctccttcaaaatctgca-aagaacacttatatagttgtcttcagc-gtcgaaatcgtgtcacgttt 5370451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 5733190 - 5733240
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| || ||||||||| ||||| || ||||||||||||||||||||    
T  5733190 aaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaat 5733240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 8393039 - 8392989
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  8393039 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 8392989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 8395248 - 8395198
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  8395248 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 8395198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 7122324 - 7122279
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    |||||||| ||||||||| || |||||||| |||||||||||||||    
T  7122324 aaatcgtgtcacgatttccctgttcttccacaccacaaatttgaag 7122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 7124546 - 7124501
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    |||||||| ||||||||| || |||||||| |||||||||||||||    
T  7124546 aaatcgtgtcacgatttccctgttcttccacaccacaaatttgaag 7124501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 18377732 - 18377785
Alignment:
Q  67 tgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacc 120  Q
    |||||||||||||||||| ||| ||||||||||  ||||||| || ||||||||    
T  18377732 tgtcaaaatcgtgtcacgattgaccaaattgtgtcacgattgatgtgtacgacc 18377785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 56178936 - 56179035
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgt-ccaaattgtgatacgattggtgcgtacga 118  Q
    ||||| ||||||||||||| || |||||||||||| |||| |||||| ||| |||||||||||| ||| | ||| || |||  ||||||| |||||||||    
T  56178936 ctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacatttttcccagatcgtgtcacgattgatgcgtacga 56179033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 30000873 - 30000929
Alignment:
Q  121 caaggtacgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtca 176  Q
    |||||||||| ||||||||||||||||| | |||||||||||   ||||||||||||    
T  30000873 caaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtca 30000929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 206; Significance: 1e-112; HSPs: 5)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 20 - 312
Target Start/End: Original strand, 6017 - 6310
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6017 ctctccttcaaaatctgcacaagaacatttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgac 6116  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| ||||| | ||||||||| |||||||||||||||  ||||||||||||||||||||||||||| ||| | | ||||    
T  6117 ccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcatgacacgattgaataccttgaaaaac 6216  T
Q  219 catgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  6217 catgctcgctgcctagaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattaacaaca 6310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 20 - 312
Target Start/End: Original strand, 2825 - 3118
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  2825 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgac 2924  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| ||||||| ||||||||| |||||||||| |||| |||||||||||||| ||||||||||||  ||||||| ||||    
T  2925 ccaaggtacgaccaaccttatcctgaaaacatacccagcaagtttgaaaatcgggtcacgttttcccaaaatcgtgacacgattgagtaccctaaaaaac 3024  T
Q  219 catgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  3025 catgctcgctgcctggaaatcgttacacgttgatgaaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaattaacaaca 3118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 133044 - 132862
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||| |||||| ||||||| ||||||||||||||||| ||||||||  ||||||||| ||||||| ||||||| |||  ||||||| | ||||||||    
T  133044 ctctcctccaaaatttgcacaagaacacttatatagcagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgtcacgattgatacgtacgac 132946  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgatt 202  Q
    ||||||||||| |||||||||||| ||||| |  |||||||| ||||||||| ||||| | || | ||||||| || |||||||    
T  132945 ccaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcatgtcacgattccacaaaatcgtgtcacgatt 132862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 149582 - 149651
Alignment:
Q  235 aaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||||||||   |||||||| || |||||||||||| ||  |||||||||||||||||||||||||    
T  149582 aaatcgtgacacgcctatgaaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaat 149651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 132809 - 132765
Alignment:
Q  255 aatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  132809 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 132765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 206; Significance: 1e-112; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 20 - 312
Target Start/End: Original strand, 13598732 - 13599025
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13598732 ctctccttcaaaatctgcacaagaacatttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgac 13598831  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| ||||| | ||||||||| |||||||||||||||  ||||||||||||||||||||||||||| ||| | | ||||    
T  13598832 ccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcatgacacgattgaataccttgaaaaac 13598931  T
Q  219 catgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  13598932 catgctcgctgcctagaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattaacaaca 13599025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 20 - 312
Target Start/End: Original strand, 37070099 - 37070392
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| ||||||||||||||||| ||||||||||||||||| || ||||||||||||  ||||||| || ||||||| |||  ||||||||||||||||||    
T  37070099 ctctacttcaaaatctgcacaagaacacttatatagcagtctttagctgtcaaaattatgtcacgattttccaaatcgtggcacgattggtgcgtacgac 37070198  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| ||||| | |||| |||||| ||||||||||||| |||||||||||||| |||||||||||| |||| | ||||||    
T  37070199 ccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccttgagaaac 37070298  T
Q  219 catgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| |||||    
T  37070299 catgctccctgcctgaaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaaaccaattttcaaca 37070392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 20 - 313
Target Start/End: Original strand, 3282039 - 3282332
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| || |||| |||  ||||||||||||||||||    
T  3282039 ctctccttcaaaatctgcataagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttttc-aaatcgtggcacgattggtgcgtacgac 3282137  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    |||||||| || |||||||||| | ||||| | ||||||||||| ||||||||||||| |||||| ||||||| |||||||||||| |||| | | ||||    
T  3282138 ccaaggtatgaccaaccttatcttgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttctcaaaatcgtgacacgattgagcaccttgaaaaac 3282237  T
Q  219 catgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
    ||| ||| |||||||||| |||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||||||||||||| || ||||||    
T  3282238 catactccctgcctgaaattcgtgacacgttgatgaaatcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaaatttcaacaa 3282332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 20 - 291
Target Start/End: Original strand, 29652145 - 29652418
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||| |||||||||| |||||||    
T  29652145 ctctccttcaaaatctgcacaaaaacacttatatagcagtcttcagctgtcaaaatcatgtcacgtttgtccaaatcgtgacacgattggtgtgtacgac 29652244  T
Q  120 ccaaggtacgatcaaccttatcct-aaaaacatgcccagc-aagttgaaaatcgtgtcatg-ttttcccaaaatcatgacacgattgaacaccctaagaa 216  Q
    ||||||||||| |||||||||||| |||||| | |||| | || ||||||||||| | | | |||| |||||||| |||||||||||| ||||||   ||    
T  29652245 ccaaggtacgaccaaccttatcctgaaaaacgtacccaacaaatttgaaaatcgtataacgttttttccaaaatcgtgacacgattgagcaccct-gcaa 29652343  T
Q  217 accatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaa 291  Q
    ||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  29652344 accatgctcactgcctgaaaatcgtgacacgttgatgaaatcgtatcacgatttctctgttcttccaaaccacaa 29652418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 49918217 - 49918035
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| |||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| |||  |||||| |||| |||||||||| |||||||    
T  49918217 ctctacttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacattttcccaaatcgtgacacgattggtgtgtacgac 49918119  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    |||||||| || |||||||||||| ||||| ||||||||||||| |||||||||||| ||||| | |||||| || ||||||||    
T  49918118 ccaaggtatgaccaaccttatcctgaaaacgtgcccagcaagttaaaaatcgtgtcacgtttttcgaaaatcgtgtcacgattg 49918035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 21536335 - 21536179
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | |  ||||||||||||||||||    
T  21536335 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt-tccaaatcggggcacgattggtgcgtacgac 21536237  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtca 176  Q
    ||||||||||| |||||| ||||| ||||| | ||||||||| |||||||||||||||    
T  21536236 ccaaggtacgaccaacctcatcctgaaaacgtacccagcaagtttgaaaatcgtgtca 21536179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 203
Target Start/End: Original strand, 28223725 - 28223904
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaa 123  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||| ||| || |||||||||||||||    
T  28223725 ccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaattgtgacacgttttgtgcgtacgacccaa 28223823  T
Q  124 ggtacgatcaaccttatcctaaaaacatgcccagc-aagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    ||||||| |||||||||| |||| || || |  || |||  ||||||||||||| |||||||||||||| || ||||||||    
T  28223824 ggtacgaccaaccttatcttaaatacttgtcgtgcaaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 28223904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 272
Target Start/End: Complemental strand, 44455028 - 44454776
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| |||||||| |||| |   | || |||||||||||||| |||||||  |||||| |||| ||| || |||||||||||    
T  44455028 ctctccttcaaaatctgcacaagaacacttaaatagtaccctgcaactgtcaaaatcgtgccacgttttgccaaatcgtgacacgtttagtgcgtacgac 44454929  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||| | |||||||||| | ||||| |||||||||||  ||||||||||||| |||| ||||||||| || |||||||| |||  || ||||| |    
T  44454928 ccaaggtacaaccaaccttatcttgaaaacttgcccagcaagccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgattggaca--ctcagaaaac 44454831  T
Q  220 atgctctctgcct--gaaaatcgtgacacgttgatgaaatcgtgccacgatttct 272  Q
    |||||||| || |    ||||||||||||| | ||||||||||| ||||||||||    
T  44454830 atgctctcggcatagccaaatcgtgacacgcttatgaaatcgtgtcacgatttct 44454776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 203
Target Start/End: Original strand, 28220530 - 28220709
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaa 123  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||  |||||| |||| ||| || |||||||||||||||    
T  28220530 ccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgttttgtgcgtacgacccaa 28220628  T
Q  124 ggtacgatcaaccttatcctaaaaacatgcccagc-aagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    ||||||| |||||||||| |||| || || |  || |||  ||||||||||||| |||||||||||||| || ||||||||    
T  28220629 ggtacgaccaaccttatcttaaatacttgtcgtgcaaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 28220709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 31659099 - 31658924
Alignment:
Q  27 tcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggt 126  Q
    |||||||||||| || ||||||||||||||||| |||| |||||||||||||||||| |||  |||||| |||| ||| |||||||||||||||||||||    
T  31659099 tcaaaatctgca-aagaacacttatatagcagtcttcaactgtcaaaatcgtgtcacattttaccaaatcgtgacacgtttggtgcgtacgacccaaggt 31659001  T
Q  127 acgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    || | |||||||||||| ||||| | |||||||||   ||||| |||||| |||||||||||||| || ||||||||    
T  31659000 acaaccaaccttatcctgaaaactttcccagcaagcaaaaaattgtgtcacgttttcccaaaatcgtgtcacgattg 31658924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 3206855 - 3206671
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcc-aaattgtgatacgattggtgcgtacga 118  Q
    |||||||||||||||| || || ||||||||||||||| | |||||| ||| |||||||||||||||| ||| ||||||||  ||||||| |||||||||    
T  3206855 ctctccttcaaaatcttca-aagaacacttatatagcaatcttcagc-gtcgaaatcgtgtcacgtttttcccaaattgtgtcacgattgatgcgtacga 3206758  T
Q  119 cccaaggta-cgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    ||||||||| ||| ||||||||||||||||| | |||||||||||| ||||||||||||| |||||||||||||  || ||||||||    
T  3206757 cccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacgattg 3206671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 30476748 - 30476903
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||  |||||| |||| ||| |||||| |||||||    
T  30476748 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgtgtacgac 30476846  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    ||||||| | | |||||||||| | ||||| ||||||||||   |||||||||||||    
T  30476847 ccaaggttcaaccaaccttatcttgaaaacttgcccagcaaaccgaaaatcgtgtca 30476903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 10925091 - 10924909
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || |||||||||||| |||| |||||||||||||||||||||||||||  |||||| |||| ||| ||| |||||| |||    
T  10925091 ctctccttcaaaatctgca-aagaacacttatataacagtcttcagctgtcaaaatcgtgtcacgttttgccaaatcgtgacacggttgatgcgtatgac 10924993  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    |||||||| || |||| ||||  | ||||| |||| | ||||  |||||||||||||  |||| |||||||| || ||||||||    
T  10924992 ccaaggtatgaccaactttattttgaaaacttgcctaccaagccgaaaatcgtgtcacatttttccaaaatcgtgtcacgattg 10924909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 13604387 - 13604205
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||| |||||| ||||||| ||||||||||||||||| ||||||||  ||||||||| ||||||| ||||||| |||  ||||||| | ||||||||    
T  13604387 ctctcctccaaaatttgcacaagaacacttatatagcagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgtcacgattgatacgtacgac 13604289  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgatt 202  Q
    ||||||||||| |||||||||||| ||||| |  |||||||| ||||||||| ||||| | || | ||||||| || |||||||    
T  13604288 ccaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcatgtcacgattccacaaaatcgtgtcacgatt 13604205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 3156734 - 3156554
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || |||||||||||| |||| ||||||||||||||| |||| ||||||  |||||  |||| ||| |||||| ||| ||     
T  3156734 ctctccttcaaaatctgca-aagaacacttatataacagtcttcagctgtcaaaattgtgttacgttttgccaaacggtgacacgtttggtgtgtatga- 3156637  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgatt 202  Q
    ||||||||||| |||||||||||| ||||| || |||||||    |||||||||| |||||||||||||||| || |||||||    
T  3156636 ccaaggtacgaccaaccttatcctgaaaacgtgtccagcaaaccaaaaatcgtgttatgttttcccaaaatcgtgtcacgatt 3156554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 232 - 315
Target Start/End: Complemental strand, 21536192 - 21536109
Alignment:
Q  232 tgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaaa 315  Q
    ||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  21536192 tgaaaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaattacaacaaaa 21536109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 70 - 313
Target Start/End: Original strand, 37033636 - 37033878
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    |||||| |||||||| ||  |||||| |||| ||| ||||||||||||||||||||||| | |||||||||||| ||||| ||||| |||||  ||||||    
T  37033636 caaaattgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgccctgcaaggcgaaaat 37033735  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcct--gaaaatcgtgacacgttgatgaaatcgtgccacga 267  Q
    |||||||||||| || |||||| || |||||||| |||||||   ||| ||||||| |  | |   ||||||||||||||   ||||||||||| |||||    
T  37033736 cgtgtcatgtttcccgaaaatcgtgtcacgattggacaccct-gcaaaacatgctcacgacattgcaaaatcgtgacacgcctatgaaatcgtgtcacga 37033834  T
Q  268 tttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
    ||||||| || ||| ||| |||||| |||||| || ||||||||||    
T  37033835 tttctctgtt-ttctaaaacacaaa-ttgaaggcactttacaacaa 37033878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 1833391 - 1833219
Alignment:
Q  19 tctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacga 118  Q
    |||||| ||||||||||||| || || |||||||||| ||| |||||||||||||||||||||||||||   ||||| |||| ||| ||||||||||| |    
T  1833391 tctctcattcaaaatctgca-aagaatacttatataggagtcttcagctgtcaaaatcgtgtcacgttttcgcaaatcgtgacacgtttggtgcgtacaa 1833293  T
Q  119 cccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatc 191  Q
    ||||||||| || |||||||||| | |||||  | | |||||||   |||||||||| ||||||||||||||||    
T  1833292 cccaaggtatgaccaaccttatcttgaaaaatgtactcagcaagccaaaaatcgtgttatgttttcccaaaatc 1833219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 24 - 203
Target Start/End: Original strand, 4552951 - 4553130
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaa 123  Q
    ||||||||||||||| |  |||||||||||| |||| |||||||||||||| ||||||||||||  |||||| |||| ||| ||| |||||||||| ||     
T  4552951 ccttcaaaatctgcaaagaaacacttatataacagtcttcagctgtcaaaaacgtgtcacgttttgccaaatcgtgacacggttgatgcgtacgactcac 4553050  T
Q  124 ggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    | |||||  ||||||||||| ||||| || | | ||||| ||||||| | ||| |||||| ||||||| || ||||||||    
T  4553051 gatacgactaaccttatcctgaaaacgtgtcaaacaagtcgaaaatcatatcacgttttctcaaaatcgtgtcacgattg 4553130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 26 - 202
Target Start/End: Complemental strand, 26644656 - 26644483
Alignment:
Q  26 ttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaagg 125  Q
    ||||||||||||| || ||||||||||||||||| ||||||||  ||||||||| ||||||| ||||||| |||  |||||||||||||||||||||       
T  26644656 ttcaaaatctgcataagaacacttatatagcagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgccacgattggtgcgtacgaccca--- 26644561  T
Q  126 tacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgatt 202  Q
    ||||| | ||||||| || ||||  | |||| |||| ||||||||||||||| |||||| ||||||| || |||||||    
T  26644560 tacgaccgaccttattctgaaaaggtacccaacaagtttgaaaatcgtgtcacgttttcacaaaatcgtgccacgatt 26644483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 3189153 - 3189036
Alignment:
Q  88 gtccaaattgtgatacgattggtgcgtacgacccaaggta-cgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtcatgttttccc 185  Q
    ||||||||||||  ||||||| |||||||||||||||||| ||| ||||||||||||||||| | |||||||||||| ||||||||||||| ||||||||    
T  3189153 gtccaaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttccc 3189054  T
Q  186 aaaatcatgacacgattg 203  Q
    |||||  || ||||||||    
T  3189053 aaaattgtgtcacgattg 3189036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 3197970 - 3197853
Alignment:
Q  88 gtccaaattgtgatacgattggtgcgtacgacccaaggta-cgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtcatgttttccc 185  Q
    ||||||||||||  ||||||| |||||||||||||||||| ||| ||||||||||||||||| | |||||||||||| ||||||||||||| ||||||||    
T  3197970 gtccaaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttccc 3197871  T
Q  186 aaaatcatgacacgattg 203  Q
    |||||  || ||||||||    
T  3197870 aaaattgtgtcacgattg 3197853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 70 - 247
Target Start/End: Complemental strand, 193213 - 193035
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||||| ||  |||||| | || ||| ||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||  ||||||    
T  193213 caaaatcgtgtcacgatttcccaaatcgcgacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctaaaaacttgcccagcaagccgaaaat 193114  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcct--gaaaatcgtgacacg 247  Q
     || ||| ||||| |||||||  || || ||||| |||||||   ||||||||||| ||||||   ||||||||||||||    
T  193113 ggtatcacgtttttccaaaattgtgtcatgattggacaccct-gcaaaccatgctcactgccttcaaaaatcgtgacacg 193035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 37879494 - 37879599
Alignment:
Q  106 ttggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaa 205  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| || |||| ||| ||||||||||||||  |||| |||||||| || |||||||||     
T  37879494 ttggtgcgtgcgacccaaggtacgaccaaccttatcctaaaaacttgtccagtaagctgaaaatcgtgtcacatttttccaaaatcgtgtcacgattgag 37879593  T
Q  206 caccct 211  Q
    ||||||    
T  37879594 caccct 37879599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 16124259 - 16124179
Alignment:
Q  233 gaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||| || |||||| |||||||    
T  16124259 gaaaatcgtgacacgttgatgaaatcgtatcacgatttctctgttcttccaaaccacaaatttaaaaccaattaacaacaa 16124179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 29135847 - 29135763
Alignment:
Q  92 aaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    |||| |||| ||| ||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||| |||||    
T  29135847 aaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagctgaaaatcatgtca 29135763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 176
Target Start/End: Original strand, 13316623 - 13316774
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaatt-gtgatacgattggtgcgtacgacccaa 123  Q
    |||||||||||||| || |||||||||||||| || ||| || |||||||||||||||||||| |||  | | |||  ||||||| ||||||||| ||||    
T  13316623 cttcaaaatctgca-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccactcgtgccacgattgatgcgtacgatccaa 13316720  T
Q  124 ggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    ||||||| |||||||||||| |||| | |||||||||||   ||||||||||||    
T  13316721 ggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtca 13316774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 20762540 - 20762357
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacga 118  Q
    ||||| ||||||||||||| || |||||||||||||| || ||| || ||| |||||||||||||||| |||  ||| |||  ||||||| ||||| |||    
T  20762540 ctctctttcaaaatctgca-aagaacacttatatagctgtcttctgc-gtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgttcga 20762443  T
Q  119 cccaaggtacgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
     | ||||||||| |||||||||||| |||| | |||||| ||||   |||||||||||| | |||||||||||| || ||||||||    
T  20762442 tcaaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattg 20762357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 92 - 211
Target Start/End: Complemental strand, 11348298 - 11348179
Alignment:
Q  92 aaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatc 191  Q
    |||| |||| ||| ||||||||||||| |||| |||||| |||||||||||| ||||| |||||| ||||  ||||||||||||| ||||  ||||||||    
T  11348298 aaatcgtgacacgtttggtgcgtacgatccaatgtacgaccaaccttatcctgaaaacttgcccaacaagccgaaaatcgtgtcacgtttctccaaaatc 11348199  T
Q  192 atgacacgattgaacaccct 211  Q
     || |||||||  |||||||    
T  11348198 gtgtcacgattagacaccct 11348179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 13547657 - 13547761
Alignment:
Q  71 aaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatc 170  Q
    |||||||||| | ||||  |||||| |||| ||| ||||||||||||||||||||||||| |||||||||  | ||||| ||||||||||| |||||||     
T  13547657 aaaatcgtgttatgttttcccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaacgtgcccagcaagctgaaaatt 13547755  T
Q  171 gtgtca 176  Q
    ||||||    
T  13547756 gtgtca 13547761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 13549568 - 13549672
Alignment:
Q  71 aaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatc 170  Q
    |||||||||| | ||||  |||||| |||| ||| ||||||||||||||||||||||||| |||||||||  | ||||| ||||||||||| |||||||     
T  13549568 aaaatcgtgttatgttttcccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaacgtgcccagcaagctgaaaatt 13549666  T
Q  171 gtgtca 176  Q
    ||||||    
T  13549667 gtgtca 13549672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 37503854 - 37503920
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgttt 87  Q
    ||||||||||||||||||| || |||||||||||| |||| ||||||||| |||||||||||||||||    
T  37503854 ctctccttcaaaatctgca-aagaacacttatatatcagtcttcagctgtaaaaatcgtgtcacgttt 37503920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 148
Target Start/End: Complemental strand, 46064764 - 46064659
Alignment:
Q  43 aacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcc 142  Q
    |||||||| ||| |||| ||||||||||||||||||| || | ||| |||||| |||  ||| ||| | ||||||||||||||||||| |||| ||||||    
T  46064764 aacacttaaataacagtcttcagctgtcaaaatcgtgacatgattggccaaatcgtgtcacggttgatacgtacgacccaaggtacgaccaactttatcc 46064665  T
Q  143 taaaaa 148  Q
    | ||||    
T  46064664 tgaaaa 46064659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 1054571 - 1054519
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaattt 306  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  1054571 aaatcgtgacacgatttctctgttcttccagaccacaaatttgaagccaattt 1054519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 39446025 - 39446077
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaattt 306  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  39446025 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaattt 39446077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 44023434 - 44023382
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaattt 306  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  44023434 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaattt 44023382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 304
Target Start/End: Complemental strand, 24793724 - 24793673
Alignment:
Q  253 gaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  24793724 gaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 24793673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 118 - 199
Target Start/End: Complemental strand, 16124327 - 16124245
Alignment:
Q  118 acccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacg 199  Q
    ||||||||||||| |||||||||||| ||||| | ||||  ||||| ||||||||||||| ||||||| |||||| |||||||    
T  16124327 acccaaggtacgaccaaccttatcctgaaaacgtacccaaaaagtttgaaaatcgtgtcacgttttccgaaaatcgtgacacg 16124245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 13659821 - 13659890
Alignment:
Q  235 aaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||||||||   |||||||| || |||||||||||| ||  |||||||||||||||||||||||||    
T  13659821 aaatcgtgacacgcctatgaaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaat 13659890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 22819806 - 22819891
Alignment:
Q  64 agctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaac 149  Q
    |||| |||||||||||||||| ||| | |||||||| |||| | | ||||||||||||||||||||| ||| ||||| || |||||    
T  22819806 agctatcaaaatcgtgtcacgattggcaaaattgtgttacggtcgatgcgtacgacccaaggtacgaccaaacttattctgaaaac 22819891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 41391128 - 41391177
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    |||||||| |||||||||||| |||||||| |||||||||||||||||||    
T  41391128 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 41391177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 13604152 - 13604108
Alignment:
Q  255 aatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  13604152 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 13604108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 154
Target Start/End: Complemental strand, 16455464 - 16455381
Alignment:
Q  71 aaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcc 154  Q
    |||| ||||||||| ||| |||||| |||  ||| ||| ||||||||||||||||||||| ||| |||||||| ||||| ||||    
T  16455464 aaaaacgtgtcacgattggccaaatcgtgtcacggttgatgcgtacgacccaaggtacgagcaaacttatcctgaaaacgtgcc 16455381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 25439456 - 25439405
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatt 305  Q
    |||||||| ||||||| |||| |||||||| |||||||||||||||||||||    
T  25439456 aaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaatt 25439405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 25444649 - 25444598
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatt 305  Q
    |||||||| ||||||| |||| |||||||| |||||||||||||||||||||    
T  25444649 aaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaatt 25444598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 148
Target Start/End: Complemental strand, 15820086 - 15820048
Alignment:
Q  110 tgcgtacgacccaaggtacgatcaaccttatcctaaaaa 148  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  15820086 tgcgtacgacccaaggtacgaccaaccttatcctaaaaa 15820048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 24202306 - 24202260
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||    
T  24202306 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 24202260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 41398764 - 41398813
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    |||||||| |||||||||||| ||||| || |||||||||||||||||||    
T  41398764 aaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 41398813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 26644431 - 26644379
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaattt 306  Q
    |||||||  ||||||| |||| |||||||||||||||||||| ||||||||||    
T  26644431 aaatcgtatcacgattcctctgttcttccaaaccacaaatttaaagccaattt 26644379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 314
Target Start/End: Complemental strand, 43988006 - 43987946
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaa 314  Q
    |||||| | ||||||| ||||  ||| |||||||||||||||||||||||||| |||||||    
T  43988006 aaatcgcgacacgattcctctgctctcccaaaccacaaatttgaagccaattttcaacaaa 43987946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 44203275 - 44203213
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaaaac 317  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| |||| | ||||||||||    
T  44203275 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatct-caacaaaaac 44203213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 9036060 - 9036010
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  9036060 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 9036010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 19360967 - 19360921
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| ||||| || |||||||||||||||||||    
T  19360967 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 19360921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 40282013 - 40281971
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||    
T  40282013 tcgtgtcacgatttccctattcttccagaccacaaatttgaag 40281971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 51765045 - 51764999
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| ||||||||||| |||||||    
T  51765045 tcgtgtcacgatttctctgttcttccagaccacaaatttaaagccaa 51764999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 20 - 304
Target Start/End: Original strand, 21630277 - 21630561
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| |||| |||||||||| |||||||    
T  21630277 ctctccttcaaaatctacacaagaacacttatatagcagtctttagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgac 21630376  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    |||| |||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||| |||||    
T  21630377 ccaaagtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcatgttttcccaaaattgtgacacgattgagcaccctaaaaaacc 21630476  T
Q  220 atgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||| ||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  21630477 atgctcactgcctggaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaat 21630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 24 - 310
Target Start/End: Original strand, 20522558 - 20522844
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaa 123  Q
    ||||||||||||||| || ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20522558 ccttcaaaatctgcagaagaacacttttatagcagtttttagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaa 20522657  T
Q  124 ggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgc 223  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||| ||||||| |||||||||||| |||||| | |||||||||    
T  20522658 ggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttctcaaaatcgtgacacgattgagcaccctgaaaaaccatgc 20522757  T
Q  224 tctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaa 310  Q
    ||  |||||| |||||||||||||||||||||||  || |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  20522758 tcattgcctggaaatcgtgacacgttgatgaaattatgtcacgatttctctgttcttccaaaccacaaatttgaagccaattaacaa 20522844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 33528389 - 33528096
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  33528389 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagttgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgac 33528290  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||||||||||||| || ||||| | ||||||||| ||||||||||||||| |||||||||||||| |||||||||||| ||||||   ||||    
T  33528289 ccaaggtacgatcaaccttattctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccct-gcaaac 33528191  T
Q  219 catgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
    ||||||| ||||||||||||| ||| ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  33528190 catgctcactgcctgaaaatcatgatacgttgatgaaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattaacaacaa 33528096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 20 - 312
Target Start/End: Complemental strand, 10707017 - 10706725
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||  |||||||||| |||||||    
T  10707017 ctcttcttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt-tccaaaccgtggcacgattggtgtgtacgac 10706919  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| ||||| |  |||||||||| ||||||||||||| |||||||||||||| |||||| ||||| |||||| ||||||    
T  10706918 ccaaggtacgaccaaccttatccttaaaacgtatccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacaattgagcaccctgagaaac 10706819  T
Q  219 catgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  10706818 catgctccctgcctgaaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaatatacaaca 10706725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 47 - 304
Target Start/End: Original strand, 39483235 - 39483493
Alignment:
Q  47 cttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaa 146  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||||||||| |||| |||||||||||||| |||||||||||||| |||||||||||| ||    
T  39483235 cttatatagcagtcttcagctgtcaaaattgtgccacgtttgtccaaatcgtgacacgattggtgcgtaagacccaaggtacgaccaaccttatcctgaa 39483334  T
Q  147 aacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcctgaaaatcgtgaca 245  Q
    ||| | |||| |||||| ||||||||||||| |||||||||||||| |||||||||||| |||||| | ||||||||||| |||| || ||||||||| |    
T  39483335 aacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgaaaaaccatgctcgctgcttggaaatcgtgaga 39483434  T
Q  246 cgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||    
T  39483435 cgttgatgaaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaat 39483493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 23078236 - 23077943
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||| ||||||| |||  ||||||||||||||||||    
T  23078236 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcacgttt-tccaaatcgtggcacgattggtgcgtacgac 23078138  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||| ||||| |||||||||||| ||||| | |||| |||||| ||||||||||||| |||||||||||||| |||||| ||||| |||||||  || |    
T  23078137 ccaagatacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacaattgagcaccctac-aatc 23078039  T
Q  219 catgctctctgcctga-aaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
    ||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||| ||||||||||||| || |||||||||||| | ||||||    
T  23078038 catgctcactgcctgggaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccaaaattttgaagccaatatgcaacaa 23077943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 20 - 312
Target Start/End: Original strand, 13569662 - 13569954
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||  ||| ||||||| |||| ||||||||||| |||||     
T  13569662 ctctcctttaaaatctgcacaagaacacttatatagtagtcttcagctgtcaaaatcgtgtcaaatttttccaaatcgtgacacgattggtgcttacgat 13569761  T
Q  120 ccaaggtacgatcaaccttatcct-aaaaacatgcccagc-aagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaa 217  Q
    ||||||||||| |||||||||||| |||||| | |||||| || ||||||||||||||| ||||| ||||||| ||||||||||||| ||||||   |||    
T  13569762 ccaaggtacga-caaccttatcctgaaaaacgtacccagcaaatttgaaaatcgtgtcacgtttttccaaaattatgacacgattgagcaccct-gcaaa 13569859  T
Q  218 ccatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||||| ||||||| ||||||||| |||||||||||||| || || ||||| ||| ||||| ||||||||||||||||||||||| |||||||    
T  13569860 ccatgctcactgcctggaaatcgtgatacgttgatgaaatcatgtcatgatttttctgttctttcaaaccacaaatttgaagccaatatacaaca 13569954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 20 - 313
Target Start/End: Original strand, 33118467 - 33118751
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  33118467 ctcttcttcaaaatctgcacaagaacacttatatagcagtcttcagttgtcaaaatcgtgtcatgtttgtccaaatcgtgacacgattggtgcgtacgac 33118566  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||  |||||||||| | ||||  ||||||||||||||||||| |||||| ||||||| |||| | |||||||||||| |||||| | |||||    
T  33118567 ccaaggtacggccaaccttatcttgaaaatgtgcccagcaagttgaaaattgtgtcacgttttcctaaaaacgtgacacgattgagcaccctgaaaaacc 33118666  T
Q  220 atgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
    |||||| |||||||||||| ||||||||          |||| ||||||||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  33118667 atgctcgctgcctgaaaattgtgacacg---------acgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaatttcaacaa 33118751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 20 - 311
Target Start/End: Complemental strand, 8389914 - 8389624
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| ||||||||||||||||  |||||||| ||| |||| ||||||| |||||||||||||| |||| |||||||  ||| | ||||||||||||||||    
T  8389914 ctctacttcaaaatctgcacaggaacacttaaataacagtcttcagctatcaaaatcgtgtcatgtttttccaaatcatgacatgattggtgcgtacgac 8389815  T
Q  120 ccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaa 217  Q
    ||||||||||  |||||||||||| |||||| | | ||||||||| ||||||||||||| |||||||||||||| ||||||||  |||||||||   |||    
T  8389814 ccaaggtacgtccaaccttatcctgaaaaacgtactcagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacga--gaacaccctgc-aaa 8389718  T
Q  218 ccatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaac 311  Q
     ||| ||| ||||||| ||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  8389717 tcatactcactgcctggaaatcttgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaac 8389624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 34389183 - 34389374
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  34389183 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt-tccaaatcgtgacacgattggtgcgtacgac 34389281  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||||||||| |||||||||||| ||||| | ||||||||| ||||||||||||||| |||||||||||||| || |||||||| |||||||    
T  34389282 ccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccct 34389374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 102 - 312
Target Start/End: Original strand, 17865591 - 17865808
Alignment:
Q  102 acgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacga 200  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||||| |||||||||||||  ||||||||||||| ||||| ||    
T  17865591 acgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcgtgacatga 17865690  T
Q  201 ttgaacaccctaagaaaccatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttcca------aaccacaaatt 294  Q
    |||| |||||||| ||||||||||| ||||||||||||||||||||| |||||||||| || |||||||||||||||||||||      |||||||||||    
T  17865691 ttgagcaccctaaaaaaccatgctcactgcctgaaaatcgtgacacgatgatgaaatcatgtcacgatttctctattcttccaaaccataaccacaaatt 17865790  T
Q  295 tgaagccaatttacaaca 312  Q
    ||||||||||| ||||||    
T  17865791 tgaagccaattaacaaca 17865808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 20 - 266
Target Start/End: Complemental strand, 14698774 - 14698528
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||| ||||| ||||||||||||||||| |||| || ||||||||||||||||||||||||||| |||| | | ||||||||||||||    
T  14698774 ctctccttcaaaatctacacaagaacacttatatagcagtcttcaactatcaaaatcgtgtcacgtttgtccaaatcgtgaaatggttggtgcgtacgac 14698675  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| |||||||||||| ||||  |||||| ||||||||||||||||||| |||||||||||||| ||| |||| |||||| || |  ||| |    
T  14698674 ccaaggtacgaccaaccttatcctgaaaatgtgcccaacaagttgaaaatcgtgtcacgttttcccaaaatcgtgatacgaatgaacatcc-agaaaatc 14698576  T
Q  220 atgctctctgcct-gaaaatcgtgacacgttgatgaaatcgtgccacg 266  Q
    |||||| |||||| |||||| ||| |||| ||| ||||||||| ||||    
T  14698575 atgctcactgcctagaaaattgtgtcacgatgaggaaatcgtgtcacg 14698528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 2837144 - 2837334
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||| | || || ||||||||||||||||| |||||||||||||||||||| ||||||  ||||||  ||| ||| ||||||||||||||    
T  2837144 ctctccttcaaaatttaca-aagaacacttatatagcagtcttcagctgtcaaaatcgtgttacgttttcccaaatcatgacacgtttggtgcgtacgac 2837242  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||||||||| |||||||||||| ||||| | ||||||||| |||||||||||||| |||||||||||||| || |||||||| |||||||    
T  2837243 ccaaggtacgaccaaccttatcctgaaaacttacccagcaaggtgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccct 2837334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 36318309 - 36318500
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||   |||||||||| ||| |||||||||||||     
T  36318309 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgtcaaattgtgacacggttggtgcgtacgat 36318407  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttccc-aaaatcatgacacgattgaacaccct 211  Q
     |||||||||| |||||||||||| ||||| || ||||||||  ||||||||||||| |||| ||| |||||| || |||||||| |||||||    
T  36318408 tcaaggtacgaccaaccttatcctgaaaacgtggccagcaagccgaaaatcgtgtcacgtttccccaaaaatcgtgtcacgattggacaccct 36318500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 36988375 - 36988566
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca--aattgtgatacgattggtgcgtacg 117  Q
    |||||||||||||| |||| || ||||||||||||||||| |||||| |||||||||||||||| ||| ||||  ||| |||  || |||| ||||||||    
T  36988375 ctctccttcaaaatatgca-aagaacacttatatagcagtcttcagc-gtcaaaatcgtgtcacattt-tccatcaatcgtgtcacaattgatgcgtacg 36988471  T
Q  118 acccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  36988472 acccaaggtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcatgtcacgattggacaccct 36988566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 249
Target Start/End: Complemental strand, 39284753 - 39284536
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| ||||||||||  |||||| |||| ||  ||||||||||||||    
T  39284753 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaatcatgtcacgttttcccaaatcgtgacacatttggtgcgtacgac 39284655  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    |            ||||||||||| ||||| | |||||||||  |||||| |||||| |||||||||||||| || |||||| | |||||||  ||||||    
T  39284654 c------------aaccttatcctgaaaactttcccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacgataggacaccctgcgaaacc 39284567  T
Q  220 atgctctctgcct-gaaaatcgtgacacgtt 249  Q
    |||||| |||||| |||||||||||||||||    
T  39284566 atgctcactgcctagaaaatcgtgacacgtt 39284536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 28258942 - 28258751
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| ||||||||||| ||||| ||||||||||||||||| ||||| ||  ||||||||| ||||||| ||||||| |||  ||||||| ||||||||||    
T  28258942 ctcttcttcaaaatctacacaagaacacttatatagcagtcttcagttgataaaatcgtgccacgttt-tccaaatcgtgccacgattgatgcgtacgac 28258844  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||||||||| |||||||||||| ||||| |  |||||||| ||||||||||||||| | |||| ||||||  || |||||||  |||||||    
T  28258843 ccaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtgccacgatttgacaccct 28258751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 2334721 - 2334873
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcc-aaattgtgatacgattggtgcgtacgaccca 122  Q
    ||||||||||||||| || ||||||||||||||||| |||||| ||| |||||||||||||||| ||| |||| |||  ||||||| || ||||||||||    
T  2334721 ccttcaaaatctgca-aagaacacttatatagcagtcttcagc-gtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgtgtacgaccca 2334818  T
Q  123 aggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    |||||||| |||||||||||| |||| | |||||||||||   ||||||||||||    
T  2334819 aggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtca 2334873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 29867737 - 29867557
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgt-ccaaattgtgatacgattggtgcgtacga 118  Q
    ||||| ||||||| ||||| || ||||||||||||||||| |||| |||||||||||||||||||||| | |||||| |||| ||| ||||||||||| |    
T  29867737 ctctctttcaaaaactgca-aagaacacttatatagcagtcttcatctgtcaaaatcgtgtcacgtttttcccaaatcgtgacacgtttggtgcgtacaa 29867639  T
Q  119 cccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    |            |||||||||| | |||||| |||||||||||| ||||||||||||| |||||||||||||| || |||||||| |||||||    
T  29867638 c------------caaccttatcttgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccct 29867557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 24 - 213
Target Start/End: Complemental strand, 45099619 - 45099430
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgaccca 122  Q
    |||||||||||| || || |||||||||||||| || ||| || |||||||||||||||||||| |||  ||| |||  ||||||| |||||||||  ||    
T  45099619 ccttcaaaatctaca-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgattca 45099522  T
Q  123 aggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaa 213  Q
    |||||||| |||||||||||| |||| | |||||||||||   ||||||||||||   |||||||||||  || |||||||| |||||||||    
T  45099521 aggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacaatttcccaaaattgtgtcacgattggacaccctaa 45099430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 70 - 247
Target Start/End: Original strand, 35447451 - 35447627
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||||| || ||| ||| |||| ||| ||||||||||||||||||||||||| |||||||||| | ||||| |||||  |||   || |||    
T  35447451 caaaatcgtgtcacgatt-tcccaatcgtgacacgtttggtgcgtacgacccaaggtacgagcaaccttatcttgaaaacttgcccgacaaaccgataat 35447549  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcct-gaaaatcgtgacacg 247  Q
    |||||||  ||||||||||||| ||  || |||||||||||| | |||| |||||| |||||| ||||||| |||||||    
T  35447550 cgtgtcacattttcccaaaatcgtgttacaattgaacaccctga-aaacaatgctcactgcctagaaaatcatgacacg 35447627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 17863955 - 17863839
Alignment:
Q  127 acgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctc 225  Q
    |||| |||||||||||| |||||| ||||||||||||  |||||||||||| ||||||||||||| ||| |||||||| ||||||| | |||||||||||    
T  17863955 acgaccaaccttatcctcaaaaacttgcccagcaagtaaaaaatcgtgtcacgttttcccaaaattatgtcacgattggacaccctga-aaaccatgctc 17863857  T
Q  226 tctgcc-tgaaaatcgtg 242  Q
     ||||| |||||||||||    
T  17863856 actgccttgaaaatcgtg 17863839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 36757527 - 36757463
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacg 84  Q
    |||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||    
T  36757527 ctctccttcaaaatctgcacaagaacacttatataacagtcttcagctgtcaaaatcgtgtcacg 36757463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 5723554 - 5723710
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacga 118  Q
    |||| |||||||||||||| || |||| |||||||||| | |||||| ||| |||||||||||||||| |||  ||| |||  ||||||| |||||||||    
T  5723554 ctcttcttcaaaatctgca-aagaacatttatatagcaatcttcagc-gtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 5723651  T
Q  119 cccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    |||||||||||| |||||||||||| |||| | || ||||||||   ||||||||||||    
T  5723652 cccaaggtacgaccaaccttatcctgaaaatcttgtccagcaagccaaaaatcgtgtca 5723710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 38312108 - 38312045
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacg 84  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||    
T  38312108 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 38312045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 4503432 - 4503588
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacga 118  Q
    ||||||||||||||||||| || |||||||||||||  || |||  | |||||||||||||||||||| |||  ||| |||  || |||| |||||||||    
T  4503432 ctctccttcaaaatctgca-aagaacacttatatagttgtcttctac-gtcaaaatcgtgtcacgtttttccccaatcgtgccacaattgatgcgtacga 4503529  T
Q  119 cccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
     ||||||||||| |||||||||||| |||| | |||||||||||   ||||||||||||    
T  4503530 tccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtca 4503588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 17057669 - 17057732
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacg 84  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||  ||||||||    
T  17057669 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaaatgtgtcacg 17057732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 17085652 - 17085715
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacg 84  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||  ||||||||    
T  17085652 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaaatgtgtcacg 17085715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 314
Target Start/End: Complemental strand, 28258727 - 28258667
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaa 314  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||| || |||||||    
T  28258727 aaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaaatttcaacaaa 28258667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 36757475 - 36757423
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaattt 306  Q
    |||||||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  36757475 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaattt 36757423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 6595306 - 6595371
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgttt 87  Q
    ||||||||||||||||||| || ||||||||||||||||| |||| | ||||||||||||||||||||    
T  6595306 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcaac-gtcaaaatcgtgtcacgttt 6595371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 9295919 - 9295869
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  9295919 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 9295869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 11098444 - 11098394
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  11098444 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 11098394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 14292068 - 14292118
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  14292068 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 14292118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 19344952 - 19345010
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||| | ||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  19344952 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 19345010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 32247295 - 32247345
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  32247295 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 32247345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 39811534 - 39811484
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  39811534 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 39811484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 44310528 - 44310478
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  44310528 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 44310478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 25410211 - 25410257
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||    
T  25410211 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 25410257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 32289203 - 32289157
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||    
T  32289203 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 32289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 17865536 - 17865589
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaa 73  Q
    |||| ||||||||| ||||||| ||||||||||||||||| || ||||||||||    
T  17865536 ctcttcttcaaaatttgcacaagaacacttatatagcagtctttagctgtcaaa 17865589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 19349819 - 19349868
Alignment:
Q  263 cacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||||||| |||| ||||||||||||||||||||||| ||||||| |||||    
T  19349819 cacgattcctctgttcttccaaaccacaaatttgaaaccaattttcaaca 19349868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 36205967 - 36206121
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatata--gcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgacc 120  Q
    ||||||||||||||| || ||||||||||||  || || ||| || |||||||||||||||||||| |||  ||| |||  || |||| ||||||| | |    
T  36205967 ccttcaaaatctgca-aagaacacttatatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacaattgatgcgtacaatc 36206064  T
Q  121 caaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    |||||||||| |||||||||||| |||| | | |||||||||   ||||||||||||    
T  36206065 caaggtacgaccaaccttatcctgaaaatctttcccagcaagccaaaaatcgtgtca 36206121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 30832970 - 30832930
Alignment:
Q  263 cacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  30832970 cacgatttctctgttcttccagaccacaaatttgaagccaa 30832930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 3492322 - 3492384
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaaaacaa 319  Q
    ||||| ||| |||||||| ||||| || ||||||||||||||||||| |  ||||||||||||    
T  3492322 tcgtgtcacaatttctctgttctttcagaccacaaatttgaagccaaatctcaacaaaaacaa 3492384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 4484868 - 4484910
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||||| |||||||||||| |||||||| |||||||||||||||    
T  4484868 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 4484910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 12647910 - 12647960
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  12647910 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 12647960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 40739402 - 40739448
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||| ||| |||||||| |||||||||||||||||||    
T  40739402 tcgtgtcacgatttgtctgttcttccagaccacaaatttgaagccaa 40739448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 20 - 314
Target Start/End: Original strand, 14520562 - 14520856
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||| ||| | ||||||||||||||||||||||||| ||||||| |||| ||||||  ||||||||||    
T  14520562 ctctccttcaaaatctgcacaagaacacttatataggagtctccagctgtcaaaatcgtgtcacgttt-tccaaatcgtgacacgattaatgcgtacgac 14520660  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| ||||| | |||| |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  14520661 ccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcatgacacgattgagcaccctgagaaac 14520760  T
Q  219 catgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaa 314  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  14520761 catgctccctgcctgaaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaacaaa 14520856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 20 - 303
Target Start/End: Complemental strand, 11916737 - 11916453
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||   ||||| |||||||||||||||||||||||    
T  11916737 ctctccttcaaaatctgcacaagaacacttatatagcagttttcaactgtcaaaatcgtgtcacgttttctcaaatcgtgatacgattggtgcgtacgac 11916638  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||| ||||| ||||||| |||| |||| ||||||||||||||| |||||||||||||| |||||||||||| ||||||   ||||    
T  11916637 ccaaggtacgaccaacctgatcctgaaaacatacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccct-gcaaac 11916539  T
Q  219 catgctctctgcct-gaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||  ||| |||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||||||||||||||||    
T  11916538 cacactcactgcctggaaaatcgtgacacgttgatgaaattgtgtcacgatttctctgttctttcaaaccacaaatttgaagccaa 11916453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 20 - 312
Target Start/End: Complemental strand, 12083942 - 12083650
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||| ||||||| |||| ||||||||||| ||||||    
T  12083942 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcacgttt-tccaaatcgtgacacgattggtgcatacgac 12083844  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| ||||| | |||| |||||| ||||||||||||| ||||||||||||   |||||| ||||| ||||||   ||||    
T  12083843 ccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaactgtgacacaattgagcaccctgt-aaac 12083745  T
Q  219 catgctctctgcctga-aaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||| |||||||| |||||||    
T  12083744 catgctcactgcctgggaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccataaatttaaagccaatatacaaca 12083650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 13488071 - 13487825
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || |||||||||||| |||| ||||||||||||||| |||||||||||  |||||| |||| ||| ||||||||||||||    
T  13488071 ctctccttcaaaatctgcaaaa-aacacttatataacagtcttcagctgtcaaaattgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgac 13487973  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| |||||||||||| ||||| |||||||||||  ||||||||||   ||||||||||||||| || ||||||||| |||||| | |||      
T  13487972 ccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtg--ctgttttcccaaaatcgtgtcacgattgagcaccctga-aaaat 13487876  T
Q  220 atgctctctgcc--tgaaaatcgtgacacgttgatgaaatcgtgccacgat 268  Q
    ||||||  ||||   ||||||||||||||||||||||||||||| ||||||    
T  13487875 atgctcattgccaaggaaaatcgtgacacgttgatgaaatcgtgtcacgat 13487825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 32636692 - 32636503
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||  |||||| |||| ||| |||||||||| |||    
T  32636692 ctctccttcaaaatctgca-aagaacacttatatagcagttttcagctgtcaaaatcatgtcacgttttcccaaatcgtgacacgtttggtgcgtaagac 32636594  T
Q  120 ccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacacc 209  Q
    ||||||||||| |||||||||||| |||||| |||||||||||| |||||||||| || |||||||||||||| || |||||||| |||||    
T  32636593 ccaaggtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgccacgttttcccaaaatcgtgtcacgattggacacc 32636503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 247
Target Start/End: Original strand, 42426535 - 42426762
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||  |||||| |||| | | ||||||||||||||    
T  42426535 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaattgtgtcacgttttcccaaatcgtgacatgtttggtgcgtacgac 42426633  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| |||||||||||| ||||| ||||||||||   |||||| |||||| |||||||||||||| || |||||||| |||||||   |||||    
T  42426634 ccaaggtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaattgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaacc 42426733  T
Q  220 atgctctctg-cctgaaaatcgtgacacg 247  Q
    |||||| ||| || ||||||| |||||||    
T  42426734 atgctcactgcccagaaaatcatgacacg 42426762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 71 - 247
Target Start/End: Complemental strand, 31004868 - 31004691
Alignment:
Q  71 aaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaa-catgcccagcaagttgaaaat 169  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||| | ||||||||||||||||| | |||||||||||||||| ||    
T  31004868 aaaaacgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaagtacaaccaaccttatcctaaaaaacgtgcccagcaagttgaatat 31004769  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcctgaaaatcgtgacacg 247  Q
    ||| ||| ||||||||| |||| |||||||||||| ||| || | ||||||||||| |||| ||||||||||||||||    
T  31004768 cgtatcacgttttcccacaatcgtgacacgattgagcactctgaaaaaccatgctcgctgcttgaaaatcgtgacacg 31004691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 19806274 - 19806119
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||  |||| | |||| ||| ||||||||||||||    
T  19806274 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaagtcgtgacacgtttggtgcgtacgac 19806176  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    ||||||||||| |||||||||||||||||| |||| ||||||  |||||||||||||    
T  19806175 ccaaggtacgaccaaccttatcctaaaaacgtgcctagcaagccgaaaatcgtgtca 19806119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 13239620 - 13239428
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca--aattgtgatacgattggtgcgtacg 117  Q
    |||| |||||||||||||| || ||||||||||||||||| |||||| |||||||| ||||||||||| ||||  ||| |||  ||||||| ||||||||    
T  13239620 ctctacttcaaaatctgca-aagaacacttatatagcagtcttcagc-gtcaaaattgtgtcacgttt-tccatcaatcgtgtcacgattgatgcgtacg 13239524  T
Q  118 acccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaa 213  Q
    ||||||||||||| |||||||||||| ||||| || |||||||||  || ||||||||| |||| ||||||||| || ||||||||||||||||||    
T  13239523 acccaaggtacgaccaaccttatcctgaaaacttgtccagcaagtcaaagatcgtgtcacgtttacccaaaatcttgtcacgattgaacaccctaa 13239428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 42428730 - 42428966
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || |||| |||||||||||| ||||| |||||||||||||||| ||||  | |||| |||| ||| ||||||||||||||    
T  42428730 ctctccttcaaaatctgca-aagaacatttatatagcagtcttcagttgtcaaaatcgtgtcaggttttcctaaatcgtgacacgtttggtgcgtacgac 42428828  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    |            ||||||||||||||||| |||||||||||   |||||||||||| |||||||||||||| || |||||||| |||||||   |||||    
T  42428829 c------------aaccttatcctaaaaacttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaacc 42428916  T
Q  220 atgctctctgcct-gaaaatcgtgacacgttgatgaaatcgtgccacgat 268  Q
    |||||| || ||| ||||||||||||||| | |  |||||||| ||||||    
T  42428917 atgctcacttcctagaaaatcgtgacacgcttactaaatcgtgtcacgat 42428966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 64 - 249
Target Start/End: Original strand, 16650965 - 16651151
Alignment:
Q  64 agctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt 163  Q
    |||||||||||||||||||| |||  |||||| |||| ||| ||||||||||||| ||||||||||| |||||||||||| ||||| | |||| ||||||    
T  16650965 agctgtcaaaatcgtgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtt 16651064  T
Q  164 gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcctga-aaatcgtgacacgtt 249  Q
      ||||||||||| |||||||||||||| || || ||||||  ||||| | ||||  ||||| |||||| | |||||||| ||||||    
T  16651065 ataaatcgtgtcacgttttcccaaaatcgtgtcatgattgagtaccctgaaaaacattgctcactgcctcagaaatcgtgtcacgtt 16651151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 70 - 211
Target Start/End: Complemental strand, 5057650 - 5057509
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||||||||  ||||||||||| ||| ||| ||||||||||| ||||||||| |||||||||||| ||||| ||| || ||||| ||||||    
T  5057650 caaaatcgtgtcacgttttcccaaattgtgacacggttgatgcgtacgaccaaaggtacgaccaaccttatcctgaaaacttgctcaacaagtcgaaaat 5057551  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
     |||||| ||||| |||||||| || |||||||| |||||||    
T  5057550 tgtgtcacgttttaccaaaatcgtgtcacgattggacaccct 5057509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 20 - 241
Target Start/End: Complemental strand, 37439016 - 37438793
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtc---caaattgtgatacgattggtgcgtac 116  Q
    ||||||||||||||||||| || ||||||||||||||||| |||| |  ||||||| ||||||||||| |    | ||| |||  ||||||| |||||||    
T  37439016 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcaaca-tcaaaattgtgtcacgtttttttttccaatcgtgtcacgattgatgcgtac 37438919  T
Q  117 gacccaaggtacgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaaga 215  Q
    ||||||||||||||  ||||||||||| |||| | |||||| ||||   |||||||||||| ||||||||||||||||| |||||||| |||| || | |    
T  37438918 gacccaaggtacgacaaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgttttcccaaaatcatgtcacgattggacactctga-a 37438820  T
Q  216 aaccatgctctctgcc-tgaaaatcgt 241  Q
    |||||||||| ||||| ||||||||||    
T  37438819 aaccatgctcactgccttgaaaatcgt 37438793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 28 - 303
Target Start/End: Complemental strand, 9353091 - 9352816
Alignment:
Q  28 caaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggta 127  Q
    |||||||||||||| |||||||| ||| |||| ||||||||  ||||||||| ||||||| ||||||| |||  ||||||| |  |||||||||||||||    
T  9353091 caaaatctgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgccacgattgatatgtacgacccaaggta 9352993  T
Q  128 cgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctct 226  Q
    ||| |||||||||||| ||||| |  |||||||| ||||||||||||||| | |||| || |||| || |||||||  |||||||   |||||| ||||     
T  9352992 cgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccct-gcaaacca-gctca 9352895  T
Q  227 ctgcct--gaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    | || |   ||||||||| |||| ||    ||||| | |||||||||||| ||||| ||||||||||||||||||||||    
T  9352894 cggcattacaaaatcgtgtcacgatgccacaatcgcgtcacgatttctctgttctttcaaaccacaaatttgaagccaa 9352816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 70 - 176
Target Start/End: Complemental strand, 27015133 - 27015027
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||||| ||  |||||| |||| ||| ||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| |||||||    
T  27015133 caaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccaacaagctgaaaat 27015034  T
Q  170 cgtgtca 176  Q
    |||||||    
T  27015033 cgtgtca 27015027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 533637 - 533538
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||    
T  533637 ctctccttcaaaatctgcaaaa-aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgac 533539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 30683220 - 30683395
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcc-aaattgtgatacgattggtgcgtacga 118  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||  || ||||||||  ||||||| |||||||||    
T  30683220 ctctccttcaaaatctgca-aagaacacttatatagcagttttcagc-gtcaaaatcgtgtcacgttttcccaaaattgtgtcacgattgatgcgtacga 30683317  T
Q  119 cccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacac 208  Q
    |            |||||||||||| ||||| |||| ||||||| ||||||||||||| |||||||||||||  || |||||||| ||||    
T  30683318 c------------caaccttatcctgaaaacttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacgattggacac 30683395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 36932114 - 36931958
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||| ||||| |||||||| |||||||| ||| |||| ||||||||  ||||||||| |||| || || ||||||||  ||||||| | ||||||||    
T  36932114 ctctcctccaaaaactgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacgattttc-aaattgtgtcacgattgatacgtacgac 36932016  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtca 176  Q
    ||||||||||| |||||||||||| ||||| |  | |||||| |||||||||||||||    
T  36932015 ccaaggtacgaccaaccttatcctgaaaacttaacaagcaagtttgaaaatcgtgtca 36931958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 16649928 - 16650044
Alignment:
Q  26 ttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaagg 125  Q
    ||||||||||||| |  ||||||||||||| ||| || ||||||||||||| |||||| |||  |||||| |||| ||| ||||||||||||| ||||||    
T  16649928 ttcaaaatctgcaaagaaacacttatatagtagtctttagctgtcaaaatcatgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaagg 16650027  T
Q  126 tacgatcaaccttatcc 142  Q
    ||||| |||||||||||    
T  16650028 tacgaccaaccttatcc 16650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 28750955 - 28751034
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtg 99  Q
    ||||| ||||||||||||| || ||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||    
T  28750955 ctctctttcaaaatctgcataagaacacttatatagcagacttcagctgtcaaaatcgtgtcacgttttcccaaattgtg 28751034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 13342929 - 13342773
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacga 118  Q
    ||||||||||||||||||| || |||||||||||||| || ||| ||  ||||||||||||||||||| |||  ||| |||  ||||||| |||||||||    
T  13342929 ctctccttcaaaatctgca-aagaacacttatatagctgtcttctgcc-tcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 13342832  T
Q  119 cccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
     | ||||||||| |||||||||||| |||| | |||||||||||   ||||||||||||    
T  13342831 tctaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtca 13342773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 25412630 - 25412474
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacga 118  Q
    ||||||||||||||||||| || |||||||||||||  || ||| || ||| |||||||||||||||| |||  ||| |||  ||||||| |||||||||    
T  25412630 ctctccttcaaaatctgca-aagaacacttatatagatgtcttctgc-gtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 25412533  T
Q  119 cccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
     ||||||||||| |||||||||||| |||| | |||||||||||   ||||||||||||    
T  25412532 tccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtca 25412474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 247
Target Start/End: Complemental strand, 40146825 - 40146691
Alignment:
Q  113 gtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacacccta 212  Q
    |||||||||||||||||| |||| || |||| ||||| || ||| |||| ||||||||| ||||  ||||||||||||| || |||||||| |||||||     
T  40146825 gtacgacccaaggtacgaccaactttttcctgaaaacgtgaccaacaagctgaaaatcgagtcacattttcccaaaatcgtgtcacgattggacaccctg 40146726  T
Q  213 agaaaccatgctctctgcct-gaaaatcgtgacacg 247  Q
    | |||||||| || |||||| |||||||||| ||||    
T  40146725 a-aaaccatgttcactgcctagaaaatcgtgccacg 40146691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 174
Target Start/End: Complemental strand, 30182457 - 30182302
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca--aattgtgatacgattggtgcgtacg 117  Q
    ||||| ||||||||||||| || ||||||| |||||| || ||| || |||||||||||||||||||| |||   ||| |||  ||||||| ||||||||    
T  30182457 ctctcattcaaaatctgca-aagaacacttttatagctgtcttctgc-gtcaaaatcgtgtcacgtttttcccccaatcgtgccacgattgatgcgtacg 30182360  T
Q  118 acccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgt 174  Q
    | ||||||||||| |||||||||||| |||| | |||||||||||   ||||||||||    
T  30182359 atccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgt 30182302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 39468917 - 39468987
Alignment:
Q  106 ttggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| || ||||||||  |||||||||||||    
T  39468917 ttggtgcatacgacccaaggtacgaccaaccttatcctaaaaacgtgtccagcaagccgaaaatcgtgtca 39468987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 535705 - 535616
Alignment:
Q  87 tgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    |||| |||| |||| ||| ||||||| ||||||||||||||||| |||||||||||| ||||| || ||||||||  |||||||||||||    
T  535705 tgtcaaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtca 535616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 148
Target Start/End: Original strand, 36074344 - 36074471
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgt-ccaaattgtgatacgattggtgcgtacga 118  Q
    ||||||||||||||||||| || |||||||||||||| || ||| || ||||||||| |||||||||| | || ||| |||  | ||||| |||||||||    
T  36074344 ctctccttcaaaatctgca-aagaacacttatatagctgtcttctgc-gtcaaaatcatgtcacgttttttcccaatcgtgccatgattgatgcgtacga 36074441  T
Q  119 cccaaggtacgatcaaccttatcctaaaaa 148  Q
     ||||||||||| |||||||||||| ||||    
T  36074442 tccaaggtacgaccaaccttatcctgaaaa 36074471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 125 - 268
Target Start/End: Complemental strand, 38746534 - 38746390
Alignment:
Q  125 gtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgct 224  Q
    |||||| |||||||||||| ||||| || ||||||||  ||||||||||||| ||||| ||||||   || |||||||||||||   |||||||||||||    
T  38746534 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgtttttccaaaaatgtgtcacgattgaacacttcaagaaaccatgct 38746435  T
Q  225 ctctgcctg-aaaatcgtgacacgttgatgaaatcgtgccacgat 268  Q
      |||||||  ||||||||||||| | |  ||||| |||||||||    
T  38746434 aactgcctgccaaatcgtgacacggtaaataaatcatgccacgat 38746390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 38746606 - 38746535
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatc 141  Q
    ||||||||||||| | ||  ||||||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  38746606 caaaatcgtgtcatgatttcccaaattgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatc 38746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 31401404 - 31401346
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||||||||| |||||    
T  31401404 aaatcgtgacacgattcctctattctcccaaaccacaaatttgaagccaattttcaaca 31401346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 535751 - 535684
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttg 88  Q
    ||||||||||||||||||| || |||| ||||||| |||| ||||||||||||||||||| ||||||||    
T  535751 ctctccttcaaaatctgca-aagaacaattatatatcagtcttcagctgtcaaaatcgtgacacgtttg 535684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 31180771 - 31180823
Alignment:
Q  252 tgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  31180771 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 31180823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 314
Target Start/End: Complemental strand, 31396547 - 31396487
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaa 314  Q
    |||||||| ||||||| |||| |||| |||||||||||||||||||||||||| |||||||    
T  31396547 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 31396487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 43592795 - 43592847
Alignment:
Q  252 tgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  43592795 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 43592847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 1456695 - 1456645
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  1456695 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 1456645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 2785905 - 2785963
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||| | ||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  2785905 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 2785963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 15045222 - 15045272
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  15045222 aaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaat 15045272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 27450352 - 27450402
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  27450352 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 27450402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 29402607 - 29402557
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  29402607 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 29402557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 30631891 - 30631941
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  30631891 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 30631941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 33768714 - 33768772
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||| | ||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  33768714 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33768772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 33791846 - 33791904
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||| | ||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  33791846 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33791904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 43599261 - 43599311
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  43599261 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 43599311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 43604753 - 43604803
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  43604753 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 43604803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 43610245 - 43610295
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  43610245 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 43610295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 36931898 - 36931855
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagc 300  Q
    ||||| |||||||||||| |||||||||||||||||||||||||    
T  36931898 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagc 36931855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 37556182 - 37556120
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaaaac 317  Q
    |||||||| ||||||| |||| |||||||| ||||||||||||||||||| || ||||||||||    
T  37556182 aaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaatt-caacaaaaac 37556120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 16407696 - 16407650
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||    
T  16407696 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 16407650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 16544051 - 16544001
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||||||||||||||||||| ||||    
T  16544051 aaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaat 16544001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 16546273 - 16546223
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||||||||||||||||||| ||||    
T  16546273 aaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaat 16546223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 27445509 - 27445559
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||| | ||||||||||||||||||||    
T  27445509 aaatcgtgtcacgatttctctgttcttctagaccacaaatttgaagccaat 27445559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 37561021 - 37560955
Alignment:
Q  237 atcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    |||||| |||| | || |||||||| ||||||| |||| |||||||| |||||||||||||||||||    
T  37561021 atcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaa 37560955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 28807133 - 28807082
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatt 305  Q
    |||||||| ||||||| |||| |||||||| |||| ||||||||||||||||    
T  28807133 aaatcgtgacacgattcctctgttcttccagaccataaatttgaagccaatt 28807082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 10592901 - 10592851
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  10592901 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 10592851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 11181597 - 11181474
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttca---gctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtac 116  Q
    |||| |||||||| ||||| || |||||||||||| |||| ||||   ||||| ||||  |||||||| ||| ||||||||||| ||| ||| | |||||    
T  11181597 ctctacttcaaaaactgca-aagaacacttatataacagtcttcatcagctgtaaaaaatgtgtcacgattgaccaaattgtgacacggttgatacgtac 11181499  T
Q  117 gacccaaggtacgatcaaccttatc 141  Q
     ||||| |||| || ||||||||||    
T  11181498 aacccacggtatgaccaaccttatc 11181474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 15465070 - 15465116
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| ||||| || |||||||||||||||||||    
T  15465070 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 15465116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 16409132 - 16409086
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| ||||| || |||||||||||||||||||    
T  16409132 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 16409086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 26177521 - 26177475
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| ||||||||| || |||||||| |||||||||||||||||||    
T  26177521 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 26177475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 40379735 - 40379685
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  40379735 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 40379685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 22536796 - 22536845
Alignment:
Q  255 aatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    ||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  22536796 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 22536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 25077763 - 25077718
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    |||||||| ||||||||| || |||||||| |||||||||||||||    
T  25077763 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25077718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 25135732 - 25135687
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    |||||||| ||||||||| || |||||||| |||||||||||||||    
T  25135732 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25135687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 28751027 - 28751072
Alignment:
Q  166 aaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    |||| |||||| |||||||||||||| || ||||||||||||||||    
T  28751027 aaattgtgtcacgttttcccaaaatcgtgtcacgattgaacaccct 28751072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 35388197 - 35388233
Alignment:
Q  263 cacgatttctctattcttccaaaccacaaatttgaag 299  Q
    |||||||||||| |||||||| |||||||||||||||    
T  35388197 cacgatttctctgttcttccagaccacaaatttgaag 35388233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 304
Target Start/End: Original strand, 43625605 - 43625641
Alignment:
Q  268 tttctctattcttccaaaccacaaatttgaagccaat 304  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  43625605 tttctctgttcttccagaccacaaatttgaagccaat 43625641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 313
Target Start/End: Complemental strand, 2647463 - 2647170
Alignment:
Q  19 tctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacga 118  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||| |||||||||||||||| |||| |||||||||||||||||    
T  2647463 tctctccttcaaaatctgcacaagaacacttttatagcagtcttcagctctcaaaatcgtatcacgtttgtccaaatcgtgacacgattggtgcgtacga 2647364  T
Q  119 cccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    |||||||||||| |||||||||||| ||||| |||||||||||||||||||| ||||| |||||||||||||| |||||||||| | |||||| | ||||    
T  2647363 cccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcatgtcacgttttcccaaaatcgtgacacgattaagcaccctcaaaaac 2647264  T
Q  219 catgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
    ||||||| ||||||||||||| |||||||||||||||||||||  ||||||||||| ||| || |||||| |||||||||||||||| |||||||    
T  2647263 catgctcgctgcctgaaaatcctgacacgttgatgaaatcgtgttacgatttctctgttc-tcaaaaccataaatttgaagccaattaacaacaa 2647170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 20 - 303
Target Start/End: Complemental strand, 33332215 - 33331931
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| |  |||||| |||||||||| |||| ||||||||||||||||||  |||||||||| |||| ||||||||||||||||||    
T  33332215 ctctccttcaaaatctgcaaagaaacactaatatagcagtcttcaactgtcaaaatcgtgtcacaattgtccaaatcgtgacacgattggtgcgtacgac 33332116  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| |||||||||| | ||||  |||||||||||||||||||||||||| ||||| |||||||| |||||| ||||| |||||||| |||||    
T  33332115 ccaaggtacgaccaaccttatcttgaaaatgtgcccagcaagttgaaaatcgtgtcacgtttttccaaaatcgtgacacaattgagcaccctaaaaaacc 33332016  T
Q  220 atgctctctgcct-gaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    |||||| ||||||  ||||||||||||||||||||||||| || ||||||||||||| |  || |||||| ||||||||||||||    
T  33332015 atgctcactgcctaaaaaatcgtgacacgttgatgaaatcatgtcacgatttctctacttctcaaaaccataaatttgaagccaa 33331931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 21983557 - 21983867
Alignment:
Q  1 ctttgtaatccaagtttctctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtga 100  Q
    |||||||||||||||||||||| | |||||||||||||||| |||||||||||||| || |||||| |||||||||||||||||||| ||||||| ||||    
T  21983557 ctttgtaatccaagtttctctcac-ttcaaaatctgcacaagaacacttatatagctgtcttcagcggtcaaaatcgtgtcacgttt-tccaaatcgtga 21983654  T
Q  101 tacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacg 199  Q
     || |||||||||||||||||||||||||| |||||||||||| ||||| | |||| |||| ||||||||||||||| |||||| |||||||||| | ||    
T  21983655 cacaattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcacaaaatcatgccgcg 21983754  T
Q  200 attgaacaccctaagaaaccatgctctctgcct--gaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttga 297  Q
    ||||  ||||||   |||||| |||| |  | |   ||||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  21983755 attggtcaccct-gcaaacca-gctcacgacattgcaaaatcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttga 21983852  T
Q  298 agccaatttacaaca 312  Q
    ||||||||| |||||    
T  21983853 agccaattttcaaca 21983867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 20 - 312
Target Start/End: Original strand, 79720 - 80013
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcac-gtttgtccaaattgtgatacgattggtgcgtacga 118  Q
    |||||||||||||||||||||| ||||| ||||||| ||| |||| |||||| |||||||||||  ||||||||||| ||||   ||||||||| || ||    
T  79720 ctctccttcaaaatctgcacaagaacacatatatagtagtcttcaactgtcagaatcgtgtcacattttgtccaaatcgtgacgtgattggtgcatatga 79819  T
Q  119 cccaaggtacgatcaaccttatcct-aaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaa 216  Q
    ||||| |||||| |||||||||||| |||||| | ||||||||| ||||||||| |||||  |||| |||||||| |||||||||||| ||||     ||    
T  79820 cccaatgtacgaccaaccttatcctgaaaaacgtacccagcaagtttgaaaatcttgtcacatttttccaaaatcgtgacacgattgagcacc--tgcaa 79917  T
Q  217 accatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||||| |||||||||||| |||||||||| |||||||||||||||||| |||||||    
T  79918 accatgctcactgcctggaaatcgtgacacgttaatgaaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaatatacaaca 80013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 20 - 319
Target Start/End: Original strand, 21989240 - 21989538
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||  ||| ||||||| |||||| |||    
T  21989240 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacattt-tccaaatcatgacacgattgctgcgtatgac 21989338  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    |||||||||||||||||||||||| ||||| | |||| |||||| ||||||||||||| | |||| ||||||| || ||||||||  | ||||   ||||    
T  21989339 ccaaggtacgatcaaccttatcctgaaaacgtacccatcaagttggaaaatcgtgtcacg-tttcacaaaatcgtgccacgattggtcgccct-gcaaac 21989436  T
Q  219 catgctctctgcct--gaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaaaa 316  Q
    || |||| |  | |   ||||||||| |||| |||||||||| || |||||||||||| |||||||||||||||||||||||||||| || ||||||| |    
T  21989437 ca-gctcacgacattgcaaaatcgtgtcacgatgatgaaatcttgtcacgatttctctgttcttccaaaccacaaatttgaagccaactttcaacaaaga 21989535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 49092021 - 49092245
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacg-tttgtccaaattgtgatacgattggtgcgtacga 118  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| |||  || |||||||| |||||    
T  49092021 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgttcaaatcgtgtcactattggtgcatacga 49092120  T
Q  119 cccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaa 216  Q
     ||||||||||| |||||||||||| |||||| | ||||||||||| |||||||||||||  ||||||||||||| |||||||||||| ||||||   ||    
T  49092121 tccaaggtacgaccaaccttatcctgaaaaacgtacccagcaagttcgaaaatcgtgtcacattttcccaaaatcgtgacacgattgagcaccct-gcaa 49092219  T
Q  217 accatgctctctgcctgaaaatcgtg 242  Q
    ||||||||| ||| ||||||||||||    
T  49092220 accatgctcactgtctgaaaatcgtg 49092245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 25 - 247
Target Start/End: Original strand, 47676441 - 47676663
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaag 124  Q
    |||||||||||||| || |||||||||||| |||| |||| |||||||||| |||||||||||  | |||| |||| ||| |||||||||||||||||||    
T  47676441 cttcaaaatctgca-aagaacacttatatatcagtcttcaactgtcaaaattgtgtcacgttttccaaaatcgtgacacgtttggtgcgtacgacccaag 47676539  T
Q  125 gtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgct 224  Q
    |||||| |||||||||||| ||||| |||||||||||  ||||||||||||| |||||||||||||| || |||||||| |||||||   ||||||||||    
T  47676540 gtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatgct 47676639  T
Q  225 ctctgcct-gaaaatcgtgacacg 247  Q
    | |||||| |||||||||||||||    
T  47676640 cactgcctagaaaatcgtgacacg 47676663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 22 - 269
Target Start/End: Original strand, 14070135 - 14070382
Alignment:
Q  22 ctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgaccc 121  Q
    |||||| |||||| ||| || |||||||||||| |||| |||||||||||||||||||||||||||  |||||| |||| ||| ||||||| ||||||||    
T  14070135 ctcctttaaaatcggca-aagaacacttatataacagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgaccc 14070233  T
Q  122 aaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacca 220  Q
    ||||||||| |||||||||| | |||||| |||| ||||||| ||||||||||||| |||||||||||||| || |||||||||||||||| | ||||||    
T  14070234 aaggtacgaccaaccttatcttgaaaaacttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattgaacaccctga-aaacca 14070332  T
Q  221 tgctctctgcc-tgaaaatcgtgacacgttgatgaaatcgtgccacgatt 269  Q
    ||||| ||||| ||||||||||| |||| ||   |||||||| |||||||    
T  14070333 tgctcactgccttgaaaatcgtgccacgatgccaaaatcgtgtcacgatt 14070382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 22 - 269
Target Start/End: Original strand, 14380163 - 14380410
Alignment:
Q  22 ctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgaccc 121  Q
    |||||| |||||| ||| || |||||||||||| |||| |||||||||||||||||||||||||||  |||||| |||| ||| ||||||| ||||||||    
T  14380163 ctcctttaaaatcggca-aagaacacttatataacagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgaccc 14380261  T
Q  122 aaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacca 220  Q
    ||||||||| |||||||||| | |||||| |||| ||||||| ||||||||||||| |||||||||||||| || |||||||||||||||| | ||||||    
T  14380262 aaggtacgaccaaccttatcttgaaaaacttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattgaacaccctga-aaacca 14380360  T
Q  221 tgctctctgcc-tgaaaatcgtgacacgttgatgaaatcgtgccacgatt 269  Q
    ||||| ||||| ||||||||||| |||| ||   |||||||| |||||||    
T  14380361 tgctcactgccttgaaaatcgtgccacgatgccaaaatcgtgtcacgatt 14380410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 25 - 245
Target Start/End: Original strand, 47674248 - 47674468
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaag 124  Q
    |||||||||||||| || ||||| ||||||||||| |||||||||||||||| ||||| ||||  | |||| |||| ||| ||||||||||| |||||||    
T  47674248 cttcaaaatctgca-aagaacacctatatagcagtcttcagctgtcaaaatcatgtcatgttttccaaaatcgtgacacgtttggtgcgtacaacccaag 47674346  T
Q  125 gtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgct 224  Q
    |||||| |||||||||||| ||||| |||||||||||  ||||||||||||| |||||||||||||| || |||||||| |||||||   ||||||||||    
T  47674347 gtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatgct 47674446  T
Q  225 ctctgcct-gaaaatcgtgaca 245  Q
    | |||||| |||||||||||||    
T  47674447 cactgcctggaaaatcgtgaca 47674468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 20 - 272
Target Start/End: Complemental strand, 4796434 - 4796181
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| ||||||||||| ||||  ||||||||||||||| | |||| || |||||||||||||||||||||| ||||||||||||  |||||||||||||     
T  4796434 ctcttcttcaaaatctacacaggaacacttatatagcaatcttcaactatcaaaatcgtgtcacgtttgtctaaattgtgatacatttggtgcgtacgat 4796335  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| ||||  |||||| ||||| |||||| ||||||||||||||||||| ||||| |||||||| || ||||||||| ||||||   ||||     
T  4796334 ccaaggtacgaccaactctatcctgaaaacgtgcccatcaagttgaaaatcgtgtcacgtttttccaaaatcgtgtcacgattgagcaccctgcaaaaca 4796235  T
Q  220 atgctctctgcct---gaaaatcgtgacacgttgatgaaatcgtgccacgatttct 272  Q
    |  |||||  | |    |||||||||||||||||||||||||||| ||||||||||    
T  4796234 a--ctctcgacattaccaaaatcgtgacacgttgatgaaatcgtgtcacgatttct 4796181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 2761602 - 2761757
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||  |||||| |||| ||| ||||||||||||||    
T  2761602 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgac 2761700  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    ||||||||||| ||| |||||||| ||||| ||||||||||| ||||||||||||||    
T  2761701 ccaaggtacgaccaatcttatcctgaaaacttgcccagcaagctgaaaatcgtgtca 2761757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 24 - 311
Target Start/End: Complemental strand, 46516068 - 46515802
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaa 123  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||  |||||| |||| | | ||||||| ||||||||||    
T  46516068 ccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgccaaatcgtgacatgcttggtgcatacgacccaa 46515970  T
Q  124 ggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgc 223  Q
    |||  || |||||||||||| ||||| |||||| ||||                     || |||||| |||||||||||| |||||| | |||||||||    
T  46515969 ggtgtgaccaaccttatcctgaaaacgtgcccaacaag---------------------ccaaaaatcgtgacacgattgagcaccctgaaaaaccatgc 46515891  T
Q  224 tctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttcc-aaaccacaaatttgaagccaatttacaac 311  Q
    || ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  46515890 tcgctgcctgaaaatcgtgacacgttaatgaaatcgtgtcacgatttctctgttcttccaaaaccataaatttgaagccaattaacaac 46515802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 23554908 - 23554717
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca--aattgtgatacgattggtgcgtacg 117  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||| |||||||||||||||||||| ||||  ||| |||  ||||||| ||||||||    
T  23554908 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcagc-gtcaaaatcgtgtcacgttt-tccattaatcgtgtcacgattgatgcgtacg 23554812  T
Q  118 acccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    |||||| |||||| |||||||||||| |||||| |||||||||||| ||||||||||||| |||||||||||||| || |||||||| |||||||    
T  23554811 acccaatgtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccct 23554717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 249
Target Start/End: Complemental strand, 18126512 - 18126284
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| |||||||||||||| || |||||||||||| |||| || ||||||||||||||||||||||||   ||||| |||| ||| ||||||||||||||    
T  18126512 ctcttcttcaaaatctgca-aagaacacttatatatcagtctttagctgtcaaaatcgtgtcacgttttctcaaatcgtgacacgtttggtgcgtacgac 18126414  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| |||| ||||||| ||||| |||||| ||||  ||||||||| ||| ||||| |||||||| || |||||||| |||||||   |||||    
T  18126413 ccaaggtacgaccaacattatcctgaaaacttgcccaacaagccgaaaatcgtatcacgtttttccaaaatcgtg-cacgattggacaccctgcaaaacc 18126315  T
Q  220 atgctctctgcct-gaaaatcgtgacacgtt 249  Q
    || ||| || ||| ||||||| |||||||||    
T  18126314 atactcactacctagaaaatcatgacacgtt 18126284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 274
Target Start/End: Complemental strand, 26417160 - 26416928
Alignment:
Q  42 taacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatc 141  Q
    |||||||||||||||||| |||| | ||||||||||||||||| ||| |||||| |||| ||| ||||||||||||||||||||||||| |||||||| |    
T  26417160 taacacttatatagcagtcttcaaccgtcaaaatcgtgtcacgattggccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttacc 26417061  T
Q  142 ctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcctga--aaatc 239  Q
    || ||||| || ||| |||  | ||||||||||||  ||| ||||||||| || ||| |||| |||  || ||||| ||||||||| || | |  |||||    
T  26417060 ctgaaaacttgtccaacaaactaaaaatcgtgtcacatttccccaaaatcgtgtcacaattggaca--ctcagaaaacatgctctcggcataaccaaatc 26416963  T
Q  240 gtgacacgttgatgaaatcgtgccacgatttctct 274  Q
    |||||||| | ||||||||||| ||||||||||||    
T  26416962 gtgacacgcttatgaaatcgtgtcacgatttctct 26416928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 23 - 202
Target Start/End: Original strand, 4538853 - 4539032
Alignment:
Q  23 tccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgaccca 122  Q
    |||||||||||||||| |  ||||||||||||||||| || |||||||||||||||||||  |||  |||||| |||| ||| ||||||||||||| |||    
T  4538853 tccttcaaaatctgcaaagaaacacttatatagcagtctttagctgtcaaaatcgtgtcatattttgccaaatcgtgacacgtttggtgcgtacgatcca 4538952  T
Q  123 aggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgatt 202  Q
    |||||||| ||||||| |||| ||||| |||  |||||   ||||||||||||| |||||||||||||| || |||||||    
T  4538953 aggtacgaccaaccttgtcctgaaaacttgcttagcaaaccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgatt 4539032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 246
Target Start/End: Complemental strand, 4586029 - 4585804
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || |||||||||||| |||| || |||||||||||||||||||| |||  |||||| |||| | | ||||||||||||||    
T  4586029 ctctccttcaaaatctgca-aagaacacttatataacagtctttagctgtcaaaatcgtgtcacattttcccaaatcgtgacatgtttggtgcgtacgac 4585931  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| |||||||||  | ||||| | |||| ||||   |||||| ||||| |||||||||||||  || |||||||| |||||||   ||| |    
T  4585930 ccaaggtacgaccaaccttatattgaaaacttacccaacaagccaaaaatcttgtcacgttttcccaaaatagtgtcacgattggacaccct-gcaaaac 4585832  T
Q  220 atgctctctgcct-gaaaatcgtgacac 246  Q
    |||||| |||||| ||||||||||||||    
T  4585831 atgctcactgcctagaaaatcgtgacac 4585804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 1113525 - 1113369
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| ||||||||||||||||  |||||||||||| |||| |||||||||||||||||||||||||||  ||||   |||| ||| ||||||||||||||    
T  1113525 ctcttcttcaaaatctgcacagaaacacttatataacagtattcagctgtcaaaatcgtgtcacgttttgccaatacgtgacacgtttggtgcgtacgac 1113426  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    ||||||||||| |||||||||||| ||||  |||||| || |  |||||||||||||    
T  1113425 ccaaggtacgaccaaccttatcctgaaaatttgcccatcaggccgaaaatcgtgtca 1113369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 67 - 270
Target Start/End: Complemental strand, 27347745 - 27347542
Alignment:
Q  67 tgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaa 166  Q
    ||||||||||||||||| |||  |||||  |||| ||| ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||  |||    
T  27347745 tgtcaaaatcgtgtcacattttcccaaaccgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaa 27347646  T
Q  167 aatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcct-gaaaatcgtgacacgttgatgaaatcgtgccac 265  Q
    |||| ||||| |||||||||||||| || ||||||||  ||||||   ||||  ||||| |||||| ||||||||||||||| | |  |||||||| |||    
T  27347645 aatcatgtca-gttttcccaaaatcgtgtcacgattgggcaccctgcaaaacagtgctcactgcctagaaaatcgtgacacgcttagcaaatcgtgtcac 27347547  T
Q  266 gattt 270  Q
    |||||    
T  27347546 gattt 27347542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 211
Target Start/End: Complemental strand, 48489300 - 48489108
Alignment:
Q  19 tctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacga 118  Q
    ||||| ||||||||||||||||| |||||||| |||| |   | || ||||||||||| ||||||||||  |||||| |||| ||||||||||||||| |    
T  48489300 tctcttcttcaaaatctgcacaagaacacttaaatagtaccctgcaactgtcaaaatcatgtcacgttttgccaaatcgtgacacgattggtgcgtacaa 48489201  T
Q  119 cccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||||||| || ||||||||||||  || |||||||||||||   |||| ||||||| |||||||| ||||| || |||| |||||||||||    
T  48489200 cccaaggtatgaccaaccttatcctggaagcatgcccagcaagccaaaaaccgtgtcacgttttccctaaatcgtgtcacggttgaacaccct 48489108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 70 - 247
Target Start/End: Original strand, 32358403 - 32358580
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||||  || |||||||  ||| ||| ||||||||||||| |||||||||||||||| ||||||| ||||| ||||||||||| |||||||    
T  32358403 caaaatcgtgtcacaattttccaaatcatgacacgtttggtgcgtacgatccaaggtacgatcaactttatcctgaaaacgtgcccagcaagctgaaaat 32358502  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcct-gaaaatcgtgacacg 247  Q
     |||||| |||||||||||||| |  |||||||| | ||||| | ||||||||||| |||||| |||||||||| ||||    
T  32358503 tgtgtcacgttttcccaaaatcgtatcacgattggataccctga-aaaccatgctcactgcctagaaaatcgtgtcacg 32358580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 43 - 312
Target Start/End: Original strand, 47263998 - 47264267
Alignment:
Q  43 aacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcc 142  Q
    ||||||||||||||||| ||||||||  ||||||||| ||||||| ||||||| |||  | ||||| | ||||||||||||| ||||| |||||||||||    
T  47263998 aacacttatatagcagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgtcaagattgatacgtacgacccaagatacgaccaaccttatcc 47264096  T
Q  143 taaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcct--gaaaatc 239  Q
    | ||||| |  |||||||| ||||||||||||||| | |||| || |||  || |||||||  ||||||| | |||||| |||| |  | |   ||||||    
T  47264097 tgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacacaattgtgccacgatttgacaccct-acaaacca-gctcacgacattacaaaatc 47264194  T
Q  240 gtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||| |||| ||   |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  47264195 gtgtcacgatgccaaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaaatttcaaca 47264267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 28 - 312
Target Start/End: Original strand, 2479676 - 2479960
Alignment:
Q  28 caaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggta 127  Q
    |||||||||||||| ||||||||||||  ||| |||| |||  ||||||||| ||||||| |||||||  ||  | ||||| ||||||||||||||||||    
T  2479676 caaaatctgcacaagaacacttatatactagtcttcaactgataaaatcgtgccacgttt-tccaaatcatgccatgattgatgcgtacgacccaaggta 2479774  T
Q  128 cgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctct 226  Q
    ||| |||||||||||| ||||| |  ||| |||| ||||||||||||| | | |||| ||||||| ||||||||||  |||||||   |||||| ||||     
T  2479775 cgaccaaccttatcctgaaaacttaaccaacaagtttgaaaatcgtgtaacgatttcacaaaatcgtgacacgatttgacaccct-gcaaacca-gctca 2479872  T
Q  227 ctgcct--gaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    | || |  |||||||||| |||| ||   |||||||| ||| |||||||| ||||| |||||||||||||||||||||| || |||||    
T  2479873 cggcattagaaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttacaaaccacaaatttgaagccaaatttcaaca 2479960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 92 - 247
Target Start/End: Complemental strand, 2389871 - 2389716
Alignment:
Q  92 aaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatc 191  Q
    |||| |||| ||| |||||| |||||| ||||||||||| |||||||||||| ||||| | ||||||||| ||||||||||||||  ||||| |||||||    
T  2389871 aaatcgtgacacgtttggtgtgtacgatccaaggtacgaccaaccttatcctgaaaacgttcccagcaagctgaaaatcgtgtcacattttctcaaaatc 2389772  T
Q  192 atgacacgattgaacaccctaagaaaccatgctctctgcct-gaaaatcgtgacacg 247  Q
     || |||||||| ||||||||| ||||||||||| ||| || |||||||||| ||||    
T  2389771 gtgtcacgattggacaccctaa-aaaccatgctcactgtctagaaaatcgtgccacg 2389716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 6570462 - 6570333
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||| |||| |  |||||||| | |  ||||||||| |||||||| ||||||||| ||| |||||| |||| ||| ||| |||||| |||    
T  6570462 ctctccttcaaaatatgcaaagaaacacttaaacaatagttttcagttgtcaaaaacgtgtcacgattggccaaatcgtgacacggttgatgcgtatgac 6570363  T
Q  120 ccaaggtacgatcaaccttatcctaaaaac 149  Q
    ||||||||||||||||||||||||||||||    
T  6570362 ccaaggtacgatcaaccttatcctaaaaac 6570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 44847882 - 44847762
Alignment:
Q  28 caaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggta 127  Q
    |||||||| ||||| |||||||||||||| || ||||||||  ||||||||| ||||||| ||||||| |||  ||||||| | ||||||||||||||||    
T  44847882 caaaatctacacaagaacacttatatagccgtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgccacgattgatacgtacgacccaaggta 44847784  T
Q  128 cgatcaaccttatcctaaaaac 149  Q
    ||| |||||||||||| |||||    
T  44847783 cgaccaaccttatcctgaaaac 44847762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 48491447 - 48491291
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| ||||||||||||||||| |||||||| |||| |   | || || |||||||| ||||||||||  |||||| |||| ||| ||||||||||||||    
T  48491447 ctcttcttcaaaatctgcacaagaacacttaaatagtaccctgcaactatcaaaatcatgtcacgttttgccaaatcgtgacacggttggtgcgtacgac 48491348  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    ||||||||||| |||||| ||| | ||| | |||||| ||||  |||||||||||||    
T  48491347 ccaaggtacgaccaacctaatcttgaaagcgtgcccaacaagccgaaaatcgtgtca 48491291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 70 - 191
Target Start/End: Original strand, 6360479 - 6360600
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||||  ||  |||||| |||| ||| ||||||||||||||||||| ||||| |||| ||||||| ||||| |||||| ||||  ||||||    
T  6360479 caaaatcgtgtcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagatacgaccaacattatcctgaaaacttgcccaacaagccgaaaat 6360578  T
Q  170 cgtgtcatgttttcccaaaatc 191  Q
    ||||||| |||| |||||||||    
T  6360579 cgtgtcacgtttccccaaaatc 6360600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 87 - 208
Target Start/End: Complemental strand, 43864063 - 43863942
Alignment:
Q  87 tgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttccca 186  Q
    |||| ||||||||  ||| ||||||||||||||||||||||||| |||||||||||| ||||| | || | |||   ||||||||||||| |||||||||    
T  43864063 tgtcaaaattgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaactttcctaacaaaccgaaaatcgtgtcacgttttccca 43863964  T
Q  187 aaatcatgacacgattgaacac 208  Q
    ||||| || |||||||| ||||    
T  43863963 aaatcgtgtcacgattggacac 43863942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 29990919 - 29990782
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgaccca 122  Q
    ||||||||||||||| || ||||||||||||||| | |||||| ||| |||||||||||| ||| |||  ||| |||  ||||||| |||||||||| ||    
T  29990919 ccttcaaaatctgca-aagaacacttatatagcaatcttcagc-gtcgaaatcgtgtcacatttttccccaatcgtgccacgattgatgcgtacgactca 29990822  T
Q  123 aggtacgatcaaccttatcctaaaaa-catgcccagcaag 161  Q
    |||||||||||| ||||||||||||| | |||||||||||    
T  29990821 aggtacgatcaatcttatcctaaaaatcttgcccagcaag 29990782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 4178639 - 4178460
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgaccca 122  Q
    ||||||||||||||| || ||||||| |||||| || ||| || |||||||||||||||||||| |||  |||  ||  ||||||| ||||||||| |||    
T  4178639 ccttcaaaatctgca-aagaacacttttatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcttgccacgattgatgcgtacgatcca 4178542  T
Q  123 aggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    |||||||| |||||||||||| |||| | |||| | ||||   |||||||||||| | |||||||||||| || ||||||||    
T  4178541 aggtacgaccaaccttatcctgaaaatcttgcctaacaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattg 4178460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 211
Target Start/End: Complemental strand, 19495811 - 19495647
Alignment:
Q  49 tatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaa-attgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcct-aaa 146  Q
    |||||| |||| |||||| ||| |||||||||||||||| ||| | || |||  ||||||| ||||||||||||||||||||| |||||||||||| |||    
T  19495811 tatatatcagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaa 19495713  T
Q  147 aacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    | | |||||||||||    ||||||||| || |||||||||||||  || |||||||| |||||||    
T  19495712 atcttgcccagcaagccaaaaaatcgtggcacgttttcccaaaattgtgtcacgattggacaccct 19495647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 112 - 204
Target Start/End: Original strand, 30026391 - 30026482
Alignment:
Q  112 cgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattga 204  Q
    |||||||| |||||||||| |||||||||||| ||| | ||||| ||||| |||||||||||||| |||| |||||||||||| |||||||||    
T  30026391 cgtacgactcaaggtacgaccaaccttatcctgaaa-cgtgcccggcaagctgaaaatcgtgtcacgtttccccaaaatcatgtcacgattga 30026482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 35853783 - 35853626
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtc---caaattgtgatacgattggtgcgtac 116  Q
    |||| |||||||||||||| || |||||||||||||| || ||| || |||||||||||||||||||| |    | ||| |||  ||||||| |||||||    
T  35853783 ctcttcttcaaaatctgca-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttttctccaatcgtgccacgattgatgcgtac 35853686  T
Q  117 gacccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtc 175  Q
    || ||||||||||| | |||||||||| |||||| |||||||||||   |||||||||||    
T  35853685 gatccaaggtacgaccgaccttatcctgaaaaacttgcccagcaagccaaaaatcgtgtc 35853626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 30025032 - 30025111
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtga 100  Q
    ||||| ||||||||||||| || ||||||||||||| ||| |||||||||||||||||||||||||||  |||||| ||||    
T  30025032 ctctcattcaaaatctgca-aagaacacttatatagtagtcttcagctgtcaaaatcgtgtcacgttttgccaaatcgtga 30025111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 31109127 - 31109075
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaattt 306  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  31109127 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattt 31109075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 24515064 - 24515201
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgaccca 122  Q
    ||||||||||||||| || |||||||||||||| || ||| || ||| |||||||||| ||||| |||  ||| |||  ||||||| ||||||||| |||    
T  24515064 ccttcaaaatctgca-aagaacacttatatagctgtcttctgc-gtctaaatcgtgtcgcgtttttccccaatcgtgccacgattgatgcgtacgatcca 24515161  T
Q  123 aggtacgatcaaccttatcct-aaaaacatgcccagcaag 161  Q
    |||||||| |||||||||||| |||| | |||||||||||    
T  24515162 aggtacgaccaaccttatcctgaaaatcttgcccagcaag 24515201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 2058547 - 2058597
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  2058547 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 2058597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 4873664 - 4873714
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  4873664 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 4873714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 12406800 - 12406850
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  12406800 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 12406850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 20357085 - 20357035
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  20357085 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 20357035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 21640366 - 21640416
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  21640366 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 21640416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 2759079 - 2759131
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaa 73  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||||||    
T  2759079 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaa 2759131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 303
Target Start/End: Original strand, 21646594 - 21646634
Alignment:
Q  263 cacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  21646594 cacgatttctctgttcttccaaaccacaaatttgaagccaa 21646634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 24260878 - 24260827
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatt 305  Q
    |||||||| ||||||| |||| |||| |||||||||||||||||||||||||    
T  24260878 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatt 24260827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 44847677 - 44847618
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
    |||||||| |||||||||||| |||||  ||||||||||||||||||||| || ||||||    
T  44847677 aaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaaatttcaacaa 44847618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 48408453 - 48408390
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaaaacaat 320  Q
    ||||| |||||||||||| ||||| || ||||||||||||||||||| |  |||||||||||||    
T  48408453 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaacaaaaacaat 48408390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 1532939 - 1532893
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||    
T  1532939 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 1532893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 12397435 - 12397485
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| | |||||||||| |||||||| ||||||||||||||||||||    
T  12397435 aaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaagccaat 12397485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 18392723 - 18392773
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||||||||||||||||||| ||||    
T  18392723 aaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaat 18392773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 39730988 - 39730942
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||    
T  39730988 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39730942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 21811796 - 21811747
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    |||||||| ||||||| |||| |||||||| |||||||||||||||||||    
T  21811796 aaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 21811747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 24023875 - 24023830
Alignment:
Q  255 aatcgtgccacgatttctctattcttccaaaccacaaatttgaagc 300  Q
    ||||||| |||||||||||| |||||||| ||||||||||||||||    
T  24023875 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 24023830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 2759005 - 2759041
Alignment:
Q  39 caataacacttatatagcagttttcagctgtcaaaat 75  Q
    ||||||||||||||||||||| |||||||||||||||    
T  2759005 caataacacttatatagcagtcttcagctgtcaaaat 2759041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 3050492 - 3050552
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacga 130  Q
    ||||||||||||||| || |||||||  ||  ||||||| |||||||||||||||||||||    
T  3050492 caaaatcgtgtcacgattttccaaatgatgtcacgattgatgcgtacgacccaaggtacga 3050552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 31733354 - 31733422
Alignment:
Q  125 gtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcat 193  Q
    |||||| |||||||||||| ||||| |||||||||||  |||||| |||||| |||| || ||||||||    
T  31733354 gtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaattgtgtcacgtttccctaaaatcat 31733422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 1562530 - 1562580
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  1562530 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 1562580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 6592864 - 6592914
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  6592864 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 6592914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 18414220 - 18414266
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||    
T  18414220 tcgtgtcacgatttctctgttcttccagaccataaatttgaagccaa 18414266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 32060831 - 32060881
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  32060831 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 32060881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 18390506 - 18390555
Alignment:
Q  255 aatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    ||||||| ||||||||| || |||||| ||||||||||||||||| ||||    
T  18390506 aatcgtggcacgatttccctgttcttctaaaccacaaatttgaagacaat 18390555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 95)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 20 - 312
Target Start/End: Complemental strand, 40592536 - 40592244
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||| |||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||     
T  40592536 ctctcattcaaaatctgcacaagaacacttatatagcggtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgat 40592437  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| |||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||| |||||||||||| | |||| | |||||    
T  40592436 ccaaggtacgaccaaccttatcctgaaaacgtgtccagcaagttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagctccctgaaaaacc 40592337  T
Q  220 atgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||||||  |||||| |||| ||||||||||||||||||| || |||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  40592336 atgctcgttgcctggaaattgtgacacgttgatgaaatcatgtcacgatttctccgttcttccaaaccacaaatttgaagccaattaacaaca 40592244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 20 - 304
Target Start/End: Complemental strand, 30709551 - 30709266
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  30709551 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttttccaaatcgtgacacgattggtgcgtacgac 30709452  T
Q  120 ccaaggtacgatcaaccttatcct-aaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaa 217  Q
    |||||||| || ||| |||||||| |||||| | ||||||||| |||||||| |||||| |||||| ||||||| |||||||||||||||||||   |||    
T  30709451 ccaaggtaagaccaatcttatcctgaaaaacgtacccagcaagtttgaaaattgtgtcacgttttctcaaaatcgtgacacgattgaacaccct-gcaaa 30709353  T
Q  218 ccatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| || ||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  30709352 ccatgctcactacctgaaaattgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 30709266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 20 - 312
Target Start/End: Original strand, 36029425 - 36029717
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||| || |||  |||| ||||||||||||||||||    
T  36029425 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaattgtgtcacgtttttctaaaccgtgacacgattggtgcgtacgac 36029524  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| ||||| | ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| | ||||||   ||||    
T  36029525 ccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattaagcaccct-gcaaac 36029623  T
Q  219 catgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||| || |||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  36029624 catgttcgctgcctgaaaatcgtgacacgttgataaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaaca 36029717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 20 - 312
Target Start/End: Complemental strand, 39032309 - 39032017
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| |||||||| |||||||| ||||||||||||||| | |||||||||||||||||||||||| || || |||| |||  ||||||||||||||||||    
T  39032309 ctctacttcaaaaactgcacaagaacacttatatagcaatcttcagctgtcaaaatcgtgtcacgattttc-aaatcgtggcacgattggtgcgtacgac 39032211  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||| ||||||| ||||| | ||||||||||| |||||||||||||  ||||||||||||| |||||||||||| |||||| ||||||    
T  39032210 ccaaggtacgaccaactttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcgtgacacgattgagcaccctgagaaac 39032111  T
Q  219 catgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  39032110 catgctccctgcctgaaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaattttcaaca 39032017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 20 - 304
Target Start/End: Original strand, 48438547 - 48438832
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||| |||| |||||||||||||||||     
T  48438547 ctctccttcaaaatttgcacaagaacacttatatagcagtcttcggctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgat 48438646  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||| | |||||||||||| ||||| | |||| |||| ||||||||||||||| |||| ||||||||| ||||||| |||| |||||| | ||||    
T  48438647 ccaaggtacaaccaaccttatcctgaaaacgtacccatcaagtttgaaaatcgtgtcacgtttccccaaaatcgtgacacggttgagcaccctgaaaaac 48438746  T
Q  219 catgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||  ||| || ||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||| ||||||||    
T  48438747 catgctcgttgcttggaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttacaaaccacaaatttaaagccaat 48438832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 40734366 - 40734087
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||     
T  40734366 ctctccttcaaaatctgca-aagaacacttatatagcagtcttcagctgtcaaaattgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacgat 40734268  T
Q  120 ccaaggtacgatcaaccttatcct-aaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaa 217  Q
    ||||||||||| |||||||||||| |||||  |  ||| |||| ||||||||||||||| |||||||||||||| |||||||||||| ||||||   |||    
T  40734267 ccaaggtacgaccaaccttatcctgaaaaatgtagccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccct-gcaaa 40734169  T
Q  218 ccatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    |||||||| |||| || ||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  40734168 ccatgctcactgcttggaaatcgtgacatgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 40734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 20 - 313
Target Start/End: Original strand, 8126962 - 8127256
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| |  ||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||| ||| |||||| |||||||    
T  8126962 ctctccttcaaaatctgcaaataaacacttatatagcagtcttcaactgtcaaaatcgtgtcacgtttgtccaaatcgtgacacggttggtgtgtacgac 8127061  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||| ||||| |||||||||||| ||||| | || |||||||||||||||||||||   |||||||||||| |||||||||||| |||||| | |  ||    
T  8127062 ccaagatacgaccaaccttatcctgaaaacgtacctagcaagttgaaaatcgtgtcacactttcccaaaatcgtgacacgattgagcaccctgaaagccc 8127161  T
Q  220 atgctctctgcct-gaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
    |||||| ||||||  |||||||||| |||||||||||||| || |||||||||||||||  || ||| ||||||||||||||||| || ||||||    
T  8127162 atgctcactgcctaaaaaatcgtgatacgttgatgaaatcttgtcacgatttctctatttctcaaaatcacaaatttgaagccaaatttcaacaa 8127256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 20 - 251
Target Start/End: Complemental strand, 1736058 - 1735828
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||    
T  1736058 ctctccttcaaaatctgcataagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacaac 1735959  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| |||||||||||||||||  || |   ||||||||||||||||||| |||||||||||||| || ||||||||| |||||| | || ||    
T  1735958 ccaaggtacgaccaaccttatcctaaaaatgtgtcattcaagttgaaaatcgtgtcacgttttcccaaaatcgtg-cacgattgagcaccctgaaaagcc 1735860  T
Q  220 atgctctctgcctgaaaatcgtgacacgttga 251  Q
    |||||| |||||||||||||||||||||||||    
T  1735859 atgctcactgcctgaaaatcgtgacacgttga 1735828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 20 - 314
Target Start/End: Original strand, 27027038 - 27027333
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| ||||||||||||||||| |  |||||||||||||| ||||||||||||||||||||||||||| ||||||  |||  ||||||||||||||||||    
T  27027038 ctcttcttcaaaatctgcacaagattacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt-tccaaaacgtggcacgattggtgcgtacgac 27027136  T
Q  120 ccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaa 217  Q
    ||||||||||| |||||||||||| |||||  |  |||||||||| ||||||||||||| |||||||||||||| |||||||||||| ||| ||   |||    
T  27027137 ccaaggtacgaccaaccttatcctgaaaaatgtagccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcactctgc-aaa 27027235  T
Q  218 ccatgctctctgcctga-aaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaa 314  Q
    |||||||| |||||||  ||||||||  ||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | |||| |||||||    
T  27027236 ccatgctcactgcctgggaaatcgtgttacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtctattttcaacaaa 27027333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 20 - 280
Target Start/End: Complemental strand, 47923658 - 47923397
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||||||||| |||| ||||||| ||||||| ||    
T  47923658 ctctccttcaaaatctgcacaagaacacttatatagcactcttcagttgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacaac 47923559  T
Q  120 ccaaggtacgatcaaccttatcct-aaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaa 217  Q
    ||||||||||| |||||||||||| |||||| | ||||||||| ||||||||||||||| ||||||||||||   |||||||||||| ||||||   |||    
T  47923558 ccaaggtacgaccaaccttatcctgaaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaaatgtgacacgattgagcaccct-gcaaa 47923460  T
Q  218 ccatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattctt 280  Q
    |||||||| ||||||| | |||||||||||||||||||||  || |||||||||||| |||||    
T  47923459 ccatgctcactgcctggacatcgtgacacgttgatgaaattttgtcacgatttctctgttctt 47923397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 87 - 314
Target Start/End: Original strand, 21711600 - 21711828
Alignment:
Q  87 tgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttccc 185  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||  ||||| | | ||||||||| |||||| |||||| ||||||||    
T  21711600 tgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatccggaaaacgtactcagcaagtttgaaaattgtgtcacgttttccc 21711699  T
Q  186 aaaatcatgacacgattgaacaccctaagaaaccatgctctctgcctg-aaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaa 284  Q
    |||||| |||||||||||| |||||| | ||||||||||| ||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  21711700 aaaatcgtgacacgattgagcaccctga-aaaccatgctcactgcctggaaaatcgtgacacgttgaagaaatcgtgtcacgatttctctgttcttccaa 21711798  T
Q  285 accacaaatttgaagccaatttacaacaaa 314  Q
    ||||||||||||||||||||||||||||||    
T  21711799 accacaaatttgaagccaatttacaacaaa 21711828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 20 - 314
Target Start/End: Original strand, 27038383 - 27038668
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||          |||  ||||||||||||||||||    
T  27038383 ctcttcttcaaaatctacacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtt----------gtggcacgattggtgcgtacgac 27038472  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| ||||||| |||| |||||| |||||||||||||  ||||||||||||| ||||| |||||| ||||||   ||||    
T  27038473 ccaaggtacgaccaaccttatcctgaaaacatacccaacaagtttgaaaatcgtgtcacattttcccaaaatcgtgacatgattgagcaccctgc-aaac 27038571  T
Q  219 catgctctctgcctga-aaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaa 314  Q
    ||||||| |||||||  |||||||| |||||||||||||||||| |||||||||||| || |||||||||||||| ||||||||||||| |||||||    
T  27038572 catgctcactgcctgggaaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaattttcaacaaa 27038668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 61 - 299
Target Start/End: Complemental strand, 40735257 - 40735018
Alignment:
Q  61 ttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcct-aaaaacatgcccagca 159  Q
    |||||||||||||||||||||||||||||||||||  | | ||||||||||||||||||||||||||||| |||||||||||| |||||  |  ||||||    
T  40735257 ttcagctgtcaaaatcgtgtcacgtttgtccaaatcataacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaatgtagccagca 40735158  T
Q  160 ag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcctgaaaatcgtgacacgttgatgaaatc 258  Q
    || ||||||||||||||| |||||||||||||| |||||||||||| ||||||   ||||||||||| |||| || ||||||||||||||||||||||||    
T  40735157 agtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccct-gcaaaccatgctcactgcttggaaatcgtgacacgttgatgaaatc 40735059  T
Q  259 gtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||| |||||||| ||| ||| ||||||||||||||||||||    
T  40735058 gtgtcacgatttatctgttcatccaaaccacaaatttgaag 40735018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 20 - 299
Target Start/End: Original strand, 40844987 - 40845266
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||| ||||||| ||||||||||  ||||| ||||||| || |||| ||||||||||||||||||| |||| ||||||||||||||| ||    
T  40844987 ctctccttcaaaatttgcacaagaacacttata--gcagtcttcagctatctaaattgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacaac 40845084  T
Q  120 ccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| |||||| || |||||| |||||||||||||||| ||||||||||||||   ||| |||||| |||||| | |||     
T  40845085 ccaaggtacgaccaaccttatcctaaaaaacgtgtccagcacgttgaaaatcgtgtcacgttttcccaaaatctcaacatgattgagcaccctgaaaaat 40845184  T
Q  219 catgctctctgcct-gaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||||||| |||||| ||||||| ||||| |||||| |||||||| |||||||||||| |||| ||||| || ||||||||||    
T  40845185 catgctcactgcctagaaaatcatgacatgttgataaaatcgtgtcacgatttctctgttctcccaaaacataaatttgaag 40845266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 20 - 266
Target Start/End: Complemental strand, 8370243 - 8369997
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| ||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||| ||||||||||||||| ||    
T  8370243 ctcttcttcaaaatctgcacaagaacgcttatatagcagtcttcagttgtcaaaatcgtgtcacgttt-tccaaatcgtgacacgattggtgcgtacaac 8370145  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaa-gttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||||||||| | ||||||||  ||||||||||||||| |||||||||||||| |||||||||||| ||||||   ||||    
T  8370144 ccaaggtacgaccaaccttatcctaaaaacgttcccagcaattttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccct-gcaaac 8370046  T
Q  219 catgctctctgcctg-aaaatcgtgacacgttgatgaaatcgtgccacg 266  Q
    ||||||| || |||| |||||| ||| ||||||||||||||||| ||||    
T  8370045 catgctcactacctgaaaaatcatgaaacgttgatgaaatcgtgtcacg 8369997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 20 - 246
Target Start/End: Complemental strand, 29812931 - 29812705
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| ||||||||||| || || ||||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||| ||| ||||||||||||||    
T  29812931 ctcttcttcaaaatctaca-aagaacacttatatagcagtcttcagcggtcaaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacgac 29812833  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| |||||||||||| ||||| |||||||||||   |||||||||||| |||||||||||||| || |||||||| |||||||   |||||    
T  29812832 ccaaggtacgaccaaccttatcctgaaaacttgcccagcaagacaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaacc 29812733  T
Q  220 atgctctctgcct-gaaaatcgtgacac 246  Q
    |||||| |||||| ||||||||||||||    
T  29812732 atgctcactgcctagaaaatcgtgacac 29812705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 24 - 310
Target Start/End: Original strand, 35925816 - 35926112
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgttt----------gtccaaattgtgatacgattggtgcg 113  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||          | |||||  |||  ||||||||||||    
T  35925816 ccttcaaaaactgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttccaaaacgtggccaaaacgtggcacgattggtgcg 35925915  T
Q  114 tacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacacccta 212  Q
    |||  | ||| |||||| |||||||||||| ||||| | |||| |||||| ||||||||||||| |||||| |||| || |||||||||||| ||||||     
T  35925916 tacatctcaatgtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttctcaaactcgtgacacgattgagcaccctg 35926015  T
Q  213 agaaaccatgctctctgcctga-aaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaa 310  Q
      ||||||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| |||||    
T  35926016 c-aaaccatgctcactgcctgggaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaacc-caaatttgaagccaatatacaa 35926112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 16264681 - 16264872
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| || ||||||| |||  ||||||||||||||| ||    
T  16264681 ctctccttcaaaaactgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgctt-tccaaatcgtggcacgattggtgcgtaccac 16264779  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||||||||| |||||||||||| ||||| | |||||| || ||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  16264780 ccaaggtacgaccaaccttatcctgaaaacgtacccagctagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccct 16264872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 24694920 - 24694767
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||| ||||||||||||||| ||    
T  24694920 ctcttcttcaaaatctgcacaagaacacttatatagcagtcttcagttgtcaaaatcgtgttacgtttgtccaaatcgtgacacgattggtgcgtacaac 24694821  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtg 173  Q
    ||||||||||| |||||||||||| ||||| || |||||||||| |||||||||    
T  24694820 ccaaggtacgaccaaccttatcctgaaaacgtgtccagcaagttaaaaatcgtg 24694767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 25 - 274
Target Start/End: Original strand, 5236761 - 5237010
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaag 124  Q
    ||||||||||||||||| |||||||| |||| |   | ||  |||||||||||||||||||||  |||||| |||| ||| |||||||||||||||||||    
T  5236761 cttcaaaatctgcacaagaacacttaaatagtaccctgcaagtgtcaaaatcgtgtcacgttttgccaaatcgtgacacgtttggtgcgtacgacccaag 5236860  T
Q  125 gtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgct 224  Q
    |||||| ||| |||||||| ||||| | |||||||||  ||||||||||||| |||||||||||||  || |||||||| |||  || ||||| ||||||    
T  5236861 gtacgaccaaacttatcctgaaaactttcccagcaagccgaaaatcgtgtcacgttttcccaaaattgtgtcacgattggaca--ctcagaaaacatgct 5236958  T
Q  225 ctctgcct--gaaaatcgtgacacgttgatgaaatcgtgccacgatttctct 274  Q
    ||| || |    ||||||||||||| | ||||||||||| ||||||||||||    
T  5236959 ctcggcatagccaaatcgtgacacgcttatgaaatcgtgtcacgatttctct 5237010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 70 - 269
Target Start/End: Complemental strand, 4569552 - 4569353
Alignment:
Q  70 caaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaa 168  Q
    |||||||||||||||||| |||| ||  |||| ||| ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||  |||||    
T  4569552 caaaatcgtgtcacgttt-tccacaaccgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaa 4569454  T
Q  169 tcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcct-gaaaatcgtgacacgttgatgaaatcgtgccacga 267  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||| ||||||||| | |||||| |||||| ||| |||| ||   |||||||| |||||    
T  4569453 tcgtgtcacgttttcccaaaatcatgtcacgattggacaccctaa-aaaccatgcgcactgcctagaaaattgtgccacgatgccaaaatcgtgtcacga 4569355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 71 - 291
Target Start/End: Original strand, 43404301 - 43404523
Alignment:
Q  71 aaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatc 170  Q
    |||||||||||||| ||  |||||| |||| ||| ||||||||||||||||||||||||| | |||||||||| ||||| ||| |||||||  |||||||    
T  43404301 aaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccgaccttatcctgaaaacttgctcagcaagccgaaaatc 43404400  T
Q  171 gtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgc----ctgaaaatcgtgacacgttgatgaaatcgtgccacg 266  Q
    |||||| |||| ||||||||| || |||||||||||| ||  ||||| ||||||||| ||    |  |||||||||||| | | ||||||||||| ||||    
T  43404401 gtgtcacgtttccccaaaatcgtgtcacgattgaacatcc--agaaaacatgctctcggcactaccaaaaatcgtgacaggcttatgaaatcgtgtcacg 43404498  T
Q  267 atttctctattcttccaaaccacaa 291  Q
    |||||||| |||||||||| |||||    
T  43404499 atttctctgttcttccaaaacacaa 43404523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 25 - 247
Target Start/End: Complemental strand, 29810731 - 29810509
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaag 124  Q
    ||||||||| |||| || ||||||||||||||||| |||||||||||||||||||||||||||  |||||| |||| ||| |||||||||||||||||||    
T  29810731 cttcaaaatatgca-aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaag 29810633  T
Q  125 gtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgct 224  Q
    |||||| |||||||||||| ||||  || ||||||||   ||||| |||  | ||||| | |||||| || |||||||| |||||||   ||||||||||    
T  29810632 gtacgaccaaccttatcctgaaaatttgtccagcaagccaaaaattgtgctacgtttttctaaaatcgtgtcacgattggacaccctgcaaaaccatgct 29810533  T
Q  225 ctctgcct-gaaaatcgtgacacg 247  Q
    |  ||||| |||||| ||||||||    
T  29810532 caatgcctagaaaattgtgacacg 29810509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 106 - 247
Target Start/End: Original strand, 31340645 - 31340787
Alignment:
Q  106 ttggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatg-ttttcccaaaatcatgacacgattga 204  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| |||||| ||||  ||||||||||||||| |||||||||||||||| ||||||||     
T  31340645 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccaacaagccgaaaatcgtgtcatgtttttcccaaaatcatgtcacgattgg 31340744  T
Q  205 acaccctaagaaaccatgctctctgcct-gaaaatcgtgacacg 247  Q
    ||||||| | ||||||||||| |||||| |||||||||||||||    
T  31340745 acaccctga-aaaccatgctcactgcctagaaaatcgtgacacg 31340787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 70 - 242
Target Start/End: Complemental strand, 54593305 - 54593133
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||| | ||  |||||| |||| ||| |||||||||||||||||| |||||| |||||||||||| ||||| |||||||||||||||||||    
T  54593305 caaaatcgtgtcatgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 54593206  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcct-gaaaatcgtg 242  Q
    ||||||| |||||||||||||   | |||||||||| ||| | | ||||||||||| |||||| ||||||||||    
T  54593205 cgtgtcacgttttcccaaaattgagtcacgattgaataccatga-aaaccatgctcactgcctagaaaatcgtg 54593133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 28 - 303
Target Start/End: Original strand, 37726015 - 37726290
Alignment:
Q  28 caaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggta 127  Q
    |||||||||||||| ||||||||||||||||||| ||||||  ||||||||| ||||||| ||||||| |||  ||||||| | |||||||||||| |||    
T  37726015 caaaatctgcacaagaacacttatatagcagtttgcagctgataaaatcgtgccacgttt-tccaaatcgtgtcacgattgatacgtacgacccaatgta 37726113  T
Q  128 cgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctct 226  Q
    ||| |||||||||||| ||||| |  ||| |||| ||||||||||||||| | || | ||||||| || |||||||  |||||||   |||||| ||||     
T  37726114 cgaccaaccttatcctgaaaacttaaccaacaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttgacaccct-gcaaacca-gctca 37726211  T
Q  227 ctgc--ctgaaaatcgtgacacgttgatgaaa-tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    | ||  |  ||||||||| |||| | || ||| ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  37726212 cggcatcacaaaatcgtgtcacgat-atcaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 37726290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 44331747 - 44331937
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||| || |||||||  |||||| |||| ||  |||||| |||||||    
T  44331747 ctctccttcaaaatctgca-aataacacatatatagcagtcttcagctgtcaaaatcatgccacgtttccccaaatcgtgacacatttggtgtgtacgac 44331845  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    |||||||||||  ||| ||||| | ||||| | ||||| |||   |||||||||||| ||||| |||||||| || |||||||| |||||||    
T  44331846 ccaaggtacgactaactttatcttgaaaacgtacccaggaagccaaaaatcgtgtcacgtttttccaaaatcgtgtcacgattggacaccct 44331937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 70 - 242
Target Start/End: Original strand, 55302532 - 55302703
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    |||||| |||||||| ||  |||||| |||| ||| ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||  ||||||    
T  55302532 caaaattgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaat 55302631  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcct-gaaaatcgtg 242  Q
    ||| ||| |||||||| ||||| || |||||||||||||||| | |||| |||||| |||||| ||||||||||    
T  55302632 cgtatcacgttttccc-aaatcgtgtcacgattgaacaccctga-aaacaatgctcactgcctagaaaatcgtg 55302703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 7764320 - 7764137
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacga 118  Q
    |||||||||||||| |||| || ||||||||||||||||| ||||||  || |||||||||||||||| |||  |||  ||  ||||||| |||||||||    
T  7764320 ctctccttcaaaatttgca-aagaacacttatatagcagtcttcagca-tctaaatcgtgtcacgtttttccccaatcatgtcacgattgatgcgtacga 7764223  T
Q  119 cccaaggtacgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    |||||||||||| ||||||||||||||||| | |||||| ||||   |||||||||||| |||||||||||||| || ||||||||    
T  7764222 cccaaggtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattg 7764137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 90 - 291
Target Start/End: Original strand, 43402377 - 43402580
Alignment:
Q  90 ccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaa 189  Q
    |||||| |||| ||| ||||||||||||||||||| ||| | |||||||||||| ||||| |||||||||||  ||||||||||||| ||||  ||||||    
T  43402377 ccaaatcgtgacacgtttggtgcgtacgacccaagatacaaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgtttctccaaaa 43402476  T
Q  190 tcatgacacgattgaacaccctaagaaaccatgctctctg----cctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaa 285  Q
    || || |||||||||||| ||  ||||| ||||||||| |     |  |||||| ||||||| | ||||||||||  |||||||||||||||||||||||    
T  43402477 tcgtgtcacgattgaacatcc--agaaaacatgctctcggtactaccaaaaatcatgacacgcttatgaaatcgtttcacgatttctctattcttccaaa 43402574  T
Q  286 ccacaa 291  Q
     |||||    
T  43402575 acacaa 43402580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 23 - 203
Target Start/End: Complemental strand, 7762129 - 7761950
Alignment:
Q  23 tccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgaccc 121  Q
    ||||||||||| |||| || ||||||||||||||||| |||||| ||| |||||||||||||||| |||  ||| |||  ||||||| ||||||||||||    
T  7762129 tccttcaaaatttgca-aagaacacttatatagcagtcttcagc-gtctaaatcgtgtcacgtttttccccaatcgtgtcacgattgatgcgtacgaccc 7762032  T
Q  122 aaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    ||||||||| |||||||||||| |||| | |||||||||||   |||||||||||| | |||||||||||| || ||||||||    
T  7762031 aaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg-tttcccaaaatcgtgtcacgattg 7761950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 49200054 - 49200159
Alignment:
Q  106 ttggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaa 205  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||| |||| ||||| ||| || |||||||| |    
T  49200054 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccagcaagccgaaaatcgtgtcacgtttccccaacatcgtgtcacgattgga 49200153  T
Q  206 caccct 211  Q
    ||||||    
T  49200154 caccct 49200159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 247
Target Start/End: Complemental strand, 51398682 - 51398467
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||| || || ||||||||||||||| | ||||||||||||||||||||||| |||  |||||| |||| ||| ||||||||||||||    
T  51398682 ctctccttcaaaatctaca-aagaacacttatatagcaatcttcagctgtcaaaatcgtgtcacattttcccaaatcgtgacacgtttggtgcgtacgac 51398584  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
                ||||| |||||||||||| |||||| |||   |||||| |||||| |||||||||||||| || ||| |||| |||||||   |||||    
T  51398583 ------------caaccatatcctaaaaacttgcccaacaaaccgaaaattgtgtcacgttttcccaaaatcgtgtcacaattggacaccctgcaaaacc 51398496  T
Q  220 atgctctctgcct-gaaaatcgtgacacg 247  Q
    |||||| || ||| |||||||||||||||    
T  51398495 atgctcactacctagaaaatcgtgacacg 51398467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 245
Target Start/End: Complemental strand, 46173307 - 46173160
Alignment:
Q  97 gtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgac 196  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||| ||||| |||||| ||||  |  ||||||||||||||||||||||||| || |    
T  46173307 gtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagccg-gaatcgtgtcatgttttcccaaaatcgtgtc 46173209  T
Q  197 acgattgaacaccctaagaaaccatgctctctgcc-tgaaaatcgtgaca 245  Q
    ||||||| |||||||   ||||||||||| ||||| || |||||||||||    
T  46173208 acgattggacaccct-gcaaaccatgctcactgccttggaaatcgtgaca 46173160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 9636433 - 9636611
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgacccaa 123  Q
    |||||||||||||| || |||||||||||||| |  ||| || |||||||||||||||||||| |||  ||| |||  ||||||| ||||||||| ||||    
T  9636433 cttcaaaatctgca-aagaacacttatatagctgccttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaa 9636530  T
Q  124 ggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    ||||||| |||||||||||| |||| | || ||| ||||   |||||||||||||| ||||||||||||||| ||||||||    
T  9636531 ggtacgaccaaccttatcctgaaaatcttgtccatcaagccaaaaatcgtgtcatgatttcccaaaatcatgtcacgattg 9636611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 44331352 - 44331248
Alignment:
Q  106 ttggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaa 205  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| | |||||||||   ||||||||||||  ||||||||||||| || ||||||||||    
T  44331352 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagccaaaaatcgtgtcactttttcccaaaatcgtgtcacgattgaa 44331253  T
Q  206 caccc 210  Q
    |||||    
T  44331252 caccc 44331248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 70 - 247
Target Start/End: Complemental strand, 40912938 - 40912760
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||| | ||  |||||| |||| ||| ||||||||||||| ||||| ||||| || ||||||||  ||||| |||||| ||||  ||||||    
T  40912938 caaaatcgtgtcatgatttcccaaatcgtgacacgtttggtgcgtacgatccaagatacgaccagccttatccagaaaacttgcccaacaagccgaaaat 40912839  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcctg-aaaatcgtgacacg 247  Q
    ||||||| |||||||||||||  |  |||||||||||||   ||| |||||||||| |||||||  |||||||||||||    
T  40912838 cgtgtcacgttttcccaaaattgtatcacgattgaacacttcaaggaaccatgctcactgcctgccaaatcgtgacacg 40912760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 33386421 - 33386247
Alignment:
Q  28 caaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggta 127  Q
    |||||||||||||| |||||||| ||| |||| ||||||||  ||||||||| |||  || ||||||| |||  ||||||| | ||||||||||||| ||    
T  33386421 caaaatctgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacaatt-tccaaatcgtgtcacgattgatacgtacgacccaagata 33386323  T
Q  128 cgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgatt 202  Q
    ||| |||||||||||| ||||| |  |||||||| ||||||||||||||| | || | ||||||| || |||||||    
T  33386322 cgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatt 33386247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 125 - 247
Target Start/End: Complemental strand, 36018408 - 36018285
Alignment:
Q  125 gtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgct 224  Q
    |||||| |||||||||||||||||| |||||||||||  |||||| |||||| |||||||||||||| || ||||||||| |||||  | |||  |||||    
T  36018408 gtacgaccaaccttatcctaaaaacgtgcccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacgattgagcacccagaaaaaatatgct 36018309  T
Q  225 ctctgcct-gaaaatcgtgacacg 247  Q
    | |||||| |||||||||||||||    
T  36018308 cactgcctagaaaatcgtgacacg 36018285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 303
Target Start/End: Complemental strand, 37408323 - 37408045
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaa 123  Q
    |||||||||||| ||||| |||||||||||| |||| |||||| |  |||||| ||| ||| || ||||||| |||  ||||||| | ||||||||||||    
T  37408323 ccttcaaaatcttcacaagaacacttatataccagtcttcagcagataaaatcttgttacgatt-tccaaatcgtgccacgattgatacgtacgacccaa 37408225  T
Q  124 ggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatg 222  Q
    ||||||| |||||||||||| ||||| |  ||| |||| ||||||||||||||| | |||  || |||| || |||||||  |||||||   |||||| |    
T  37408224 ggtacgaccaaccttatcctgaaaacttaaccaacaagtttgaaaatcgtgtcacgattt-acacaatcgtgccacgatttgacaccct-gcaaacca-g 37408128  T
Q  223 ctctctgc-ct-gaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||| | || ||  ||||||||| |||| ||    ||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  37408127 ctcacggcactacaaaatcgtgtcacgatgccacaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaa 37408045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 5258444 - 5258627
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacga 118  Q
    ||||||||||||||||||| || ||||| |||||||| || ||| || |||||||||||||||||||| |||  ||| |||  || || | |||||||||    
T  5258444 ctctccttcaaaatctgca-aagaacacgtatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacaatcgatgcgtacga 5258541  T
Q  119 cccaaggtacgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
      |||||||||| |||||||||||| |||| | |||||||||||   |||||||||||| | |||||||||||| || ||||||||    
T  5258542 ttcaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattg 5258627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 70 - 211
Target Start/End: Original strand, 6096167 - 6096308
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||| | ||  |||||| |||| ||  ||||||||||||||||||||||||| |||||||||||| ||||  || |||  |||  ||||||    
T  6096167 caaaatcgtgtcatgatttcccaaatcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgtccaataagccgaaaat 6096266  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||||| |||||||||||||| || ||| |||| |||||||    
T  6096267 cgtgtcacgttttcccaaaatcgtgtcacaattggacaccct 6096308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 45095028 - 45094849
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgacccaa 123  Q
    |||||||||||||| || ||||||||||||||| | ||||||  || |||||||||||||||| |||  ||| |||  ||||||| ||||||||  ||||    
T  45095028 cttcaaaatctgca-aagaacacttatatagcaatcttcagcgttcgaaatcgtgtcacgtttttccccaatcgtgtcacgattgatgcgtacgttccaa 45094930  T
Q  124 ggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    ||||||| |||||||||||| |||| | |||||| ||||   |||||||||||| | |||||||||||  || ||||||||    
T  45094929 ggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatttcccaaaattgtgtcacgattg 45094849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 304
Target Start/End: Complemental strand, 24694726 - 24694655
Alignment:
Q  234 aaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttcc-aaaccacaaatttgaagccaat 304  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||    
T  24694726 aaaatcgtgacacgttgatgaaatcgtatcacgatttctctgttcttccaaaaccacaaatttgaagccaat 24694655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 25929150 - 25929027
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||| ||||||||||| || |  ||||||||||||| | | |||||||||||||||||||||||| ||| |||||| || | ||| ||||| |||||||     
T  25929150 ctctacttcaaaatctacaaagaaacacttatatagaaatcttcagctgtcaaaatcgtgtcacgattggccaaatcgtaacacggttggtacgtacgat 25929051  T
Q  120 ccaaggtacgatcaaccttatcct 143  Q
    |||| |||||| ||||||||||||    
T  25929050 ccaatgtacgaccaaccttatcct 25929027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 34490811 - 34490700
Alignment:
Q  92 aaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatc 191  Q
    |||| |||| ||| ||||||||||||||||||||||| | |||||||||||| ||||| ||||||  |||  ||||||||||||| ||||| ||||||||    
T  34490811 aaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgcccaataagccgaaaatcgtgtcacgtttttccaaaatc 34490712  T
Q  192 atgacacgattg 203  Q
     || ||||||||    
T  34490711 gtgtcacgattg 34490700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 27974706 - 27974586
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| |||||||||||| |||| ||||||||  ||||||||| |||  || |||||||  ||  ||||||| | ||||||||    
T  27974706 ctctccttcaaaatctgcacaagaacacttatataacagtcttcagctgataaaatcgtgccacaatt-tccaaatcatgtcacgattgatacgtacgac 27974608  T
Q  120 ccaaggtacgatcaaccttatc 141  Q
    ||||||||| | ||||||||||    
T  27974607 ccaaggtacaaccaaccttatc 27974586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 1730957 - 1730905
Alignment:
Q  263 cacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaaa 315  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  1730957 cacgatttctctgttcttccaaaccacaaatttgaagccaattaacaacaaaa 1730905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 211
Target Start/End: Original strand, 23410653 - 23410820
Alignment:
Q  43 aacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcc 142  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||  |||||| |||| ||| |||||| | || ||||||||||||| ||| ||||||     
T  23410653 aacacttatatagcagtcttcagctgtc-aaattgtgtcacgttttgccaaatcgtgacacggttggtgtgaacaacccaaggtacgaccaaacttatct 23410751  T
Q  143 taaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    | ||||| |  | |||||  | ||||| ||| || ||||| |||||||  || |||||||| |||||||    
T  23410752 tgaaaacgtatcaagcaacataaaaattgtgacacgtttttccaaaattgtgtcacgattggacaccct 23410820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 312
Target Start/End: Original strand, 16264895 - 16264954
Alignment:
Q  253 gaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||||||||| ||||||||| || ||||||||||||||||||||||||||||| |||||||    
T  16264895 gaaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaatatacaaca 16264954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 202
Target Start/End: Original strand, 27453294 - 27453471
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaag 124  Q
    |||||||| |||||||| |||||||| | |  ||| |||| |||  ||||||||| |||| || ||||||| |||  ||||||| | |||||| | ||||    
T  27453294 cttcaaaaactgcacaagaacacttaaaaactagtcttcaactgataaaatcgtgccacgatt-tccaaatcgtgtcacgattgatacgtacgtcacaag 27453392  T
Q  125 gtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgatt 202  Q
    |||||| |||||||||||| ||||| |  |||||||| ||||||||||||||| | || | || ||||||| |||||||    
T  27453393 gtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcatgtcacgatt 27453471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 27974491 - 27974433
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||| || |||||    
T  27974491 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 27974433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 5260627 - 5260779
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgaccca 122  Q
    ||||||||||||||| || |||||||||||||| || ||| || ||||||||||||||| |||| |||  ||| |||  || |||| ||||||||| |||    
T  5260627 ccttcaaaatctgca-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcatgtttttccccaatcgtgccacaattgatgcgtacgatcca 5260724  T
Q  123 aggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    | |||||| |||||||||||| |||| | |||||| ||||   ||||||||||||    
T  5260725 aagtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtca 5260779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 22172719 - 22172669
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  22172719 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 22172669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 40372313 - 40372263
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  40372313 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 40372263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 16498713 - 16498644
Alignment:
Q  235 aaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||||||||   |||||||| || |||||||||||| ||  |||||||||||||||||||||||||    
T  16498713 aaatcgtgacacgcctatgaaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaat 16498644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 8738601 - 8738549
Alignment:
Q  252 tgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    ||||||| || |||||||||||| |||||||| ||||||||||||||||||||    
T  8738601 tgaaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaat 8738549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 9090839 - 9090787
Alignment:
Q  252 tgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    ||||||| || |||||||||||| |||||||| ||||||||||||||||||||    
T  9090839 tgaaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaat 9090787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 47923387 - 47923327
Alignment:
Q  244 cacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    ||||||||||||||  || |||||||||||| || || |||||||||||||||||||||||    
T  47923387 cacgttgatgaaattttgtcacgatttctctgttttttcaaaccacaaatttgaagccaat 47923327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 2672476 - 2672417
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
    |||||||| ||||||| |||| |||||||| ||||||||||||||||||| || ||||||    
T  2672476 aaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaattccaacaa 2672417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 27986149 - 27986074
Alignment:
Q  102 acgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtca 176  Q
    ||||||| | ||||||||||||| ||||| |||||||||||| ||||| |  |||||||| |||||||||||||||    
T  27986149 acgattgatacgtacgacccaagatacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtca 27986074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 2676632 - 2676574
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||||| ||||||| |||| |||||||| ||||||||||||||||||| || |||||    
T  2676632 aaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaattccaaca 2676574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 4599050 - 4599100
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||||||||||||||||||| ||||    
T  4599050 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 4599100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 4601271 - 4601321
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||||||||||||||||||| ||||    
T  4601271 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 4601321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 7167825 - 7167875
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| | ||||||||||||||||||    
T  7167825 aaatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaat 7167875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 8477945 - 8477995
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||| |||||||| |||||||| ||||||||||||||||||||    
T  8477945 aaatcgtgtcacaatttctctgttcttccagaccacaaatttgaagccaat 8477995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 23198475 - 23198521
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||    
T  23198475 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 23198521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 23200674 - 23200720
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||    
T  23200674 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 23200720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 26928135 - 26928089
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||    
T  26928135 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 26928089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 28501209 - 28501159
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| ||||||||  |||||||||||||||||||    
T  28501209 aaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaat 28501159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 28503376 - 28503326
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| ||||||||  |||||||||||||||||||    
T  28503376 aaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaat 28503326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 32143654 - 32143763
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||| |||||||||||||| |||||||| |||  ||| |||| |||  |||||||||||||| || ||||||| |||  ||||||| | |||||| |    
T  32143654 ctctcctccaaaatctgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgatt-tccaaatcgtgtcacgattgatacgtacgtc 32143752  T
Q  120 ccaaggtacga 130  Q
     ||||||||||    
T  32143753 acaaggtacga 32143763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 32476014 - 32476064
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||| |||| |||| ||||||||||||||||||||||||    
T  32476014 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 32476064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 32480872 - 32480922
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||| |||| |||| ||||||||||||||||||||||||    
T  32480872 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 32480922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 10055862 - 10055817
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||    
T  10055862 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10055817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 10058084 - 10058039
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||    
T  10058084 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10058039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 10060306 - 10060261
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||    
T  10060306 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10060261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 10062528 - 10062483
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||    
T  10062528 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10062483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 10064750 - 10064705
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||    
T  10064750 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10064705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 10066972 - 10066927
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||    
T  10066972 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10066927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 23198242 - 23198346
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaag 124  Q
    ||||||||||||||||| |||||||| |||  ||| |||  |||  |||||||||||||| || ||||||| |||  ||||||||| |||||| | ||||    
T  23198242 cttcaaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatt-tccaaatcgtgtcacgattggtacgtacgtcacaag 23198340  T
Q  125 gtacga 130  Q
    ||||||    
T  23198341 gtacga 23198346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 23200441 - 23200545
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaag 124  Q
    ||||||||||||||||| |||||||| ||| |||| |||  |||  |||||||||||||| || ||||||| |||  ||||||||| |||| | | ||||    
T  23200441 cttcaaaatctgcacaaaaacacttaaataccagtcttccactgataaaatcgtgtcacgatt-tccaaatcgtgtcacgattggtacgtaagtcacaag 23200539  T
Q  125 gtacga 130  Q
    ||||||    
T  23200540 gtacga 23200545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 32143870 - 32143919
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    |||||||| |||||||||||| ||||| || |||||||||||||||||||    
T  32143870 aaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 32143919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 27986015 - 27985971
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaa 298  Q
    |||||||| |||||||||||| || ||||||||||||||||||||    
T  27986015 aaatcgtgtcacgatttctctgttattccaaaccacaaatttgaa 27985971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 304
Target Start/End: Complemental strand, 6718346 - 6718295
Alignment:
Q  253 gaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    ||||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  6718346 gaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 6718295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 44331403 - 44331360
Alignment:
Q  43 aacacttatatagcagttttcagctgtcaaaatcgtgtcacgtt 86  Q
    |||| |||||||||||| |||||||||||||||| |||||||||    
T  44331403 aacatttatatagcagtcttcagctgtcaaaatcatgtcacgtt 44331360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 304
Target Start/End: Complemental strand, 45282643 - 45282592
Alignment:
Q  253 gaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    ||||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  45282643 gaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 45282592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 3393393 - 3393292
Alignment:
Q  102 acgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacga 200  Q
    ||||||| || |||||| || |||||||| |||| ||||||| |||| | |||||||||||   |||||||||||| | |||||||||||| || |||||    
T  3393393 acgattgatgtgtacgatcctaggtacgaccaac-ttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacga 3393295  T
Q  201 ttg 203  Q
    |||    
T  3393294 ttg 3393292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 3617091 - 3617041
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  3617091 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 3617041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 10208835 - 10208785
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| || |||||| || |||||||||||||||||||||||| ||||    
T  10208835 aaatcgtgtcatgatttccctgttcttccaaaccacaaatttgaagacaat 10208785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 10211035 - 10210985
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||||||||||||||| ||| ||||    
T  10211035 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagacaat 10210985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 18656972 - 18657022
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| || ||||||||| ||||| || ||||||||||||||||||||    
T  18656972 aaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaat 18657022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 54634767 - 54634717
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  54634767 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 54634717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 303
Target Start/End: Original strand, 1306555 - 1306595
Alignment:
Q  263 cacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    |||||||||||| |||||||| |||| ||||||||||||||    
T  1306555 cacgatttctctgttcttccagaccataaatttgaagccaa 1306595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 26928354 - 26928290
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacg 84  Q
    ||||||| |||||||||||||| |||||||| |||  ||| |||| |||  ||||||||||||||    
T  26928354 ctctcctccaaaatctgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacg 26928290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 5e-91; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 20 - 315
Target Start/End: Complemental strand, 5017261 - 5016965
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| ||| | ||||| |||| ||||||||||||||||||    
T  5017261 ctctccttcaaaatctgcacaagaacacttatatagcggtcttcagctgtcaaaatcgtgtcacattttttcaaatcgtgacacgattggtgcgtacgac 5017162  T
Q  120 ccaaggtacgatcaaccttatcct-aaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaa 217  Q
    ||||||||||| |||||||||||| |||||  | ||||| ||| ||||||||||||||| |||||| ||||||| |||||||||||| ||||||   |||    
T  5017161 ccaaggtacgaccaaccttatcctgaaaaatgtacccagtaagtttgaaaatcgtgtcacgttttctcaaaatcgtgacacgattgagcaccct-gcaaa 5017063  T
Q  218 ccatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaaa 315  Q
    |||||||| |||| || ||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  5017062 ccatgctcactgcttggaaatcgtgacacgttgatgaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaattaacaacaaaa 5016965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 20 - 312
Target Start/End: Original strand, 18234415 - 18234708
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  18234415 ctctccttcaaaaactgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgac 18234514  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| ||||| | ||||||||| ||||||||||| ||| |||||||||||||| |||||||||||| |||||| | | ||    
T  18234515 ccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtatcacgttttcccaaaatcctgacacgattgagcaccctgaaacac 18234614  T
Q  219 catgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||||||  ||| ||  ||||| | ||||||||||||||||||| ||  |||||||| |||||||||||||||||||| ||||||||| ||||||    
T  18234615 catgcttgctgtctagaaatcataacacgttgatgaaatcgtgtcaacatttctctgttcttccaaaccacaaatttaaagccaattaacaaca 18234708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 24 - 312
Target Start/End: Complemental strand, 31086235 - 31085945
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgt-ccaaattgtgatacgattggtgcgtacgaccca 122  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| | |||||| |||| |||||||||||||||||||||    
T  31086235 ccttcaaaatctgcacaagaacacttatatagcagtcttcagctatcaaaatcgtgtcacgtttttgccaaatcgtgacacgattggtgcgtacgaccca 31086136  T
Q  123 aggtacgatcaaccttatcct-aaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacca 220  Q
    |||||||| |||||||||||| |||||| | || |||||||| ||||||||||||| ||||| |||||||| |||||||||||| ||||||   ||||||    
T  31086135 aggtacgaccaaccttatcctgaaaaacgtacctagcaagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattgagcaccctgc-aaacca 31086037  T
Q  221 tgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||||| ||||||| ||||| ||||||| ||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||| ||||||    
T  31086036 tgctcactgcctggaaatcatgacacgctgatgaaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaattaacaaca 31085945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 49 - 299
Target Start/End: Original strand, 31979878 - 31980128
Alignment:
Q  49 tatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaa 148  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||| |||||| |||||||||||| ||||    
T  31979878 tatatagcagtcttcaattgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgactcaaagtacgaccaaccttatcctgaaaa 31979977  T
Q  149 catgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcctgaaaatcgtgacacgt 248  Q
    | ||||||||||||||||||| |||||| ||||| |||||||| |||||||||||| |||||| | ||||||||||| ||||||||||||||||||||||    
T  31979978 cgtgcccagcaagttgaaaattgtgtcacgtttttccaaaatcgtgacacgattgatcaccctgaaaaaccatgctcactgcctgaaaatcgtgacacgt 31980077  T
Q  249 tgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||||||||||||||  |||||||||| |||| ||||| |||||||||||||    
T  31980078 tgatgaaatcgtgcttcgatttctctgttctcccaaaacacaaatttgaag 31980128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 10076956 - 10076663
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||  ||||||||| | ||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  10076956 ctctccttcaaaatctgcacaagaacatatatatagcaatcttcagctgtcaaagtcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgac 10076857  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| |||||||||||| ||||| |   ||||||||| |||||||| ||| |||||||||||||| |  || |||||  ||||||   ||||     
T  10076856 ccaaggtacgaccaaccttatcctgaaaacgtaatcagcaagttaaaaatcgtatcacgttttcccaaaatcgtatcatgattgggcaccctgcaaaac- 10076758  T
Q  220 atgctctctgcct--gaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
      ||||||  | |   |||||||||||||| |||||||||| || |||||||| ||| ||||| |||| ||||||||| ||||||||| |||||||    
T  10076757 -agctctcgacattgcaaaatcgtgacacgctgatgaaatcatgtcacgatttttctgttctttcaaaacacaaatttaaagccaattaacaacaa 10076663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 25 - 202
Target Start/End: Complemental strand, 24435732 - 24435555
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaag 124  Q
    ||||||||| |||| |  ||||||||||||||||| |||| |||||||| |||||||||| ||| |||||| |||| ||| ||||||||||| |||||||    
T  24435732 cttcaaaatttgcaaacaaacacttatatagcagtcttcaactgtcaaattcgtgtcacgattggccaaatcgtgacacggttggtgcgtacaacccaag 24435633  T
Q  125 gtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgatt 202  Q
    |||||| |||||||||||| ||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||    
T  24435632 gtacgaccaaccttatcctgaaaacgtgccaaacaagttgaaaatcgtgtcacgttttcccaaaatcatgacacgatt 24435555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 102 - 299
Target Start/End: Complemental strand, 5571947 - 5571761
Alignment:
Q  102 acgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgat 201  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||||||    
T  5571947 acgattggtgcgtacgacccaaggtacgaccaaccttaacctaaaaacgtgcccagcaagttgaaaatcgtgtcacgttttctcaaaatcgtgacacgat 5571848  T
Q  202 tgaacaccctaagaaaccatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||| || ||| | |||||| |||| ||||           |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  5571847 tgagcatcctgaaaaaccaagctcgctgc-----------gacacgttgatgaaatcgtgtcacgatttctctattctcccaaaacacaaatttgaag 5571761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 22964037 - 22964221
Alignment:
Q  26 ttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaagg 125  Q
    ||||||||||||| || ||||||||||||||||| |||||| ||||||||||||||||||||  ||||||||||| ||| |||| ||||||||  |||||    
T  22964037 ttcaaaatctgca-aagaacacttatatagcagtcttcagccgtcaaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaagg 22964135  T
Q  126 tacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||| |||||||||||| ||||| || ||||||||   |||||||||||| |||||||||||||| |  ||||||||||||||||    
T  22964136 tacgaccaaccttatcctgaaaacttgtccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtatcacgattgaacaccct 22964221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 23824356 - 23824172
Alignment:
Q  26 ttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaagg 125  Q
    ||||||||||||| || ||||||||||||||||| |||||| ||||||||||||||||||||  ||||||||||| ||| |||| ||||||||  |||||    
T  23824356 ttcaaaatctgca-aagaacacttatatagcagtcttcagccgtcaaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaagg 23824258  T
Q  126 tacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||| |||||||||||| ||||| || ||||||||   |||||||||||| |||||||||||||| |  ||||||||||||||||    
T  23824257 tacgaccaaccttatcctgaaaacttgtccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtatcacgattgaacaccct 23824172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 70 - 247
Target Start/End: Complemental strand, 21593267 - 21593090
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    |||||||||||||| |||  |||||| |||| ||| ||||| || |||||||||||||||| ||||||||||||||||||||||||||||||  ||||||    
T  21593267 caaaatcgtgtcacattttcccaaatcgtgacacggttggtacgaacgacccaaggtacgaccaaccttatcctaaaaacatgcccagcaagccgaaaat 21593168  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcct-gaaaatcgtgacacg 247  Q
    ||||||| |||||||||||||  || |||||||| ||||||| | ||||||||||| || ||| |||||||||||||||    
T  21593167 cgtgtcacgttttcccaaaattgtgtcacgattggacaccctga-aaaccatgctcactacctagaaaatcgtgacacg 21593090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 9183391 - 9183502
Alignment:
Q  102 acgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgat 201  Q
    ||||||| ||||||||||||||||||||| |||||||||||| ||||| ||||||||||||  |||||||||||| |||||||||||||| || ||||||    
T  9183391 acgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagtcaaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 9183490  T
Q  202 tgaacaccctaa 213  Q
    || |||||||||    
T  9183491 tggacaccctaa 9183502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 5757243 - 5757072
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||| |||||||||||||| ||||||||| ||||||| ||||||||  ||||||||| ||||||| ||||||| |||  ||||||| | | ||||||    
T  5757243 ctctcctccaaaatctgcacaaaaacacttatttagcagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgccacgattgatacatacgac 5757145  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatc 191  Q
    | ||||||||| |||||||||||| ||||| |  |||||||| ||||||||||||||| | |||| |||||||    
T  5757144 caaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaatc 5757072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 291
Target Start/End: Original strand, 603613 - 603809
Alignment:
Q  97 gtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgac 196  Q
    |||| ||| ||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||  ||||||| ||||| |||||||||||||| || |    
T  603613 gtgacacgtttggtgcgtacgatccaagatacgatcaaccttatcctgaaaacttgcccagcaagccgaaaatcatgtcacgttttcccaaaatcgtgtc 603712  T
Q  197 acgattgaacaccctaagaaaccatgctctctgc----ctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaa 291  Q
    ||||||||||| ||  | ||| |||||||||  |    |  ||||||||| |||  | ||||||||||| |||||||||||| |||||||||| |||||    
T  603713 acgattgaacatcc--aaaaaacatgctctcgacactaccaaaaatcgtggcacacttatgaaatcgtgtcacgatttctctgttcttccaaaacacaa 603809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 5406502 - 5406654
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgaccca 122  Q
    ||||||||||||||| |||||||||||||||||| | |||||| ||| |||||||||||||||| |||  ||| |||  ||||||| |||||||||||||    
T  5406502 ccttcaaaatctgca-aataacacttatatagcaatcttcagc-gtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgaccca 5406599  T
Q  123 aggtacgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtca 176  Q
    |||||||| ||||||||||||||||| | |||||||||||   ||||||||||||    
T  5406600 aggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtca 5406654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 5410827 - 5410979
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgaccca 122  Q
    ||||||||||||||| |||||||||||||||||| | |||||| ||| |||||||||||||||| |||  ||| |||  ||||||| |||||||||||||    
T  5410827 ccttcaaaatctgca-aataacacttatatagcaatcttcagc-gtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgaccca 5410924  T
Q  123 aggtacgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtca 176  Q
    |||||||| ||||||||||||||||| | |||||||||||   ||||||||||||    
T  5410925 aggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtca 5410979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 21272749 - 21272563
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaag 124  Q
    |||||||| ||||| |  ||||||||||||||||| ||||| ||||||||| |||||||| ||| ||||||  ||| ||| ||||||||||||| |||||    
T  21272749 cttcaaaaactgcaaagaaacacttatatagcagtcttcagttgtcaaaattgtgtcacgattggccaaatcttgacacggttggtgcgtacgatccaag 21272650  T
Q  125 gtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||| || |||||||||||| ||||| |||| | || ||  ||||||||| || | || ||||||||| || |||||||| |||||||    
T  21272649 gtatgaccaaccttatcctgaaaacgtgccaaacatgtcaaaaatcgtgacacgattacccaaaatcgtgtcacgattggacaccct 21272563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 274
Target Start/End: Original strand, 33211486 - 33211737
Alignment:
Q  21 tctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacc 120  Q
    ||||||||| |||||||| || ||||||||||||||||| || ||||||||||||||||||| ||||   ||||| |||| | | |||||||||||||||    
T  33211486 tctccttcacaatctgca-aagaacacttatatagcagtattgagctgtcaaaatcgtgtcatgttttgtcaaatcgtgacatggttggtgcgtacgacc 33211584  T
Q  121 caaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacca 220  Q
    ||| ||||||| |||| |||||||||||| |||||| ||||   |||||| || || ||||| |||||||| ||  ||||||| |||  || ||||| ||    
T  33211585 caaagtacgataaaccatatcctaaaaacgtgcccaacaag-ccaaaatcatgacacgtttttccaaaatcgtgttacgattggaca--ctcagaaaaca 33211681  T
Q  221 tgctctctgcct--gaaaatcgtgacacgttgatgaaatcgtgccacgatttctct 274  Q
    ||||||| || |    ||||||||||||    ||||||||||| ||||||||||||    
T  33211682 tgctctcggcatagccaaatcgtgacacacctatgaaatcgtgtcacgatttctct 33211737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 46 - 312
Target Start/End: Original strand, 24714730 - 24714997
Alignment:
Q  46 acttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaa 145  Q
    |||||||||||||| | |||| |||||||| |||||||| ||| ||| || |||| ||| ||||  |||| ||||||  |||||| ||| |||||||| |    
T  24714730 acttatatagcagtctccagcagtcaaaattgtgtcacgattggccatatcgtgacacggttggatcgtatgacccacagtacgaccaatcttatcctga 24714829  T
Q  146 aaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctc-----tgcctgaaaatcg 240  Q
    |||| |||||||||||||||||||||||||| ||||| || ||||| || ||||||| ||   ||  | ||  || ||||||     |||||  ||||||    
T  24714830 aaacgtgcccagcaagttgaaaatcgtgtcacgtttttcc-aaatcgtggcacgattaaagttcc--aaaagacaagctctcgacattgcct--aaatcg 24714924  T
Q  241 tgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccac-aaatttgaagccaatttacaaca 312  Q
    ||||||  | ||||||||||| |||||||||||| || ||||||||||| ||||||||||||||||| |||||    
T  24714925 tgacacacttatgaaatcgtgtcacgatttctctgtttttccaaaccacaaaatttgaagccaattttcaaca 24714997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 31404974 - 31405096
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacga 118  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||| ||| |||||||||||||||| |||  ||| |||  ||||||| |||||||||    
T  31404974 ctctccttcaaaatctgca-aataacacttatatagctgtcttcagc-gtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 31405071  T
Q  119 cccaaggtacgatcaaccttatcct 143  Q
    || ||||||||| ||||||||||||    
T  31405072 cctaaggtacgaccaaccttatcct 31405096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 33160654 - 33160810
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca--aattgtgatacgattggtgcgtacg 117  Q
    |||||| |||||||||||| || ||||||||||||||||| |||||| |||||||| ||||||||||| ||||  ||| |||  ||||||| ||||||||    
T  33160654 ctctccatcaaaatctgca-aagaacacttatatagcagtcttcagc-gtcaaaattgtgtcacgttt-tccatcaatcgtgtcacgattgatgcgtacg 33160750  T
Q  118 acccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    |||||| |||||| |||||||||||| |||| | |||||||||||   ||||||||||||    
T  33160751 acccaatgtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtca 33160810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 30834836 - 30834993
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgt--ccaaattgtgatacgattggtgcgtacg 117  Q
    ||||||||||||||||||| || |||||||||||||  || ||| | ||||||||||||||||||||| |  || ||| |||  ||||||| ||||||||    
T  30834836 ctctccttcaaaatctgca-aagaacacttatatagttgtcttctg-tgtcaaaatcgtgtcacgttttttccccaatcgtgccacgattgatgcgtacg 30834933  T
Q  118 acccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    | ||||||||||| |||||||||||| |||| | |||||||||||   ||||||||||||    
T  30834934 atccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtca 30834993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 5411537 - 5411721
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgaccca 122  Q
    ||||||||||||||| || ||||||||||||||| | |||||| ||| |||||||||||| ||| |||  ||| |||  ||||||| |||||||||||||    
T  5411537 ccttcaaaatctgca-aagaacacttatatagcaatcttcagc-gtcgaaatcgtgtcacatttttccccaatcgtgccacgattgatgcgtacgaccca 5411634  T
Q  123 aggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacac 208  Q
    |||||||| |||||||||| | |||| | |||||||||||   ||||  |||||| | ||| |||||||| || |||||||| ||||    
T  5411635 aggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtcacgattttccaaaatcgtgtcacgattggacac 5411721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 26661547 - 26661429
Alignment:
Q  73 aatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgt 172  Q
    |||| ||||||||||  |||||| |||| |   ||||||||||||||||||||||||| |||||||||||| |||||  | ||||||||| ||||||| |    
T  26661547 aatcatgtcacgttttcccaaatcgtgacaatgttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatctt 26661448  T
Q  173 gtcatgttttcccaaaatc 191  Q
    ||||  |||||||||||||    
T  26661447 gtcacattttcccaaaatc 26661429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 26767518 - 26767400
Alignment:
Q  73 aatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgt 172  Q
    |||| ||||||||||  |||||| |||| |   ||||||||||||||||||||||||| |||||||||||| |||||  | ||||||||| ||||||| |    
T  26767518 aatcatgtcacgttttcccaaatcgtgacaatgttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatctt 26767419  T
Q  173 gtcatgttttcccaaaatc 191  Q
    ||||  |||||||||||||    
T  26767418 gtcacattttcccaaaatc 26767400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 5407212 - 5407396
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgaccca 122  Q
    ||||||||||||||| || ||||||||||||||| | |||||| ||| |||||||||||| ||| ||   ||| |||  ||||||| |||||||||||||    
T  5407212 ccttcaaaatctgca-aagaacacttatatagcaatcttcagc-gtcgaaatcgtgtcacatttttcttcaatcgtgtcacgattgatgcgtacgaccca 5407309  T
Q  123 aggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacac 208  Q
    |||||||| |||||||||| | |||| | |||||||||||   ||||  |||||| | ||| |||||||| || |||||||| ||||    
T  5407310 aggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtcacgattttccaaaatcgtgtcacgattggacac 5407396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 16452633 - 16452756
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgaccca 122  Q
    ||||||||||||||| || |||||||||||||| || |||| | ||| |||||||||||||||| |||  ||| |||  | ||||| |||||||||||||    
T  16452633 ccttcaaaatctgca-aagaacacttatatagctgtcttcatc-gtctaaatcgtgtcacgtttttccccaatcgtgccatgattgatgcgtacgaccca 16452730  T
Q  123 aggtacgatcaaccttatcctaaaaa 148  Q
    |||||||| |||||||||||| ||||    
T  16452731 aggtacgaccaaccttatcctgaaaa 16452756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 5572009 - 5571945
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacg 84  Q
    ||||||||||||| || ||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  5572009 ctctccttcaaaaactccacaagaacacttatatagcagtcttcagttgtcaaaatcgtgtcacg 5571945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 16452762 - 16452896
Alignment:
Q  43 aacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatc 141  Q
    |||||||||||||| || |||| | ||| |||||||||||||||| |||  ||| |||  ||||||| ||||||||||||||||||||| ||||||||||    
T  16452762 aacacttatatagctgtcttcatc-gtctaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatc 16452860  T
Q  142 ct-aaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    || |||| | | |||||||||   ||||||||||||    
T  16452861 ctgaaaatctttcccagcaagccaaaaatcgtgtca 16452896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 305
Target Start/End: Original strand, 5343990 - 5344058
Alignment:
Q  237 atcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatt 305  Q
    |||||| |||| |||  |||||||| |||||||||||| |||| |||||||||||||||||||||||||    
T  5343990 atcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaatt 5344058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 14737144 - 14737092
Alignment:
Q  252 tgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  14737144 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 14737092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 3809312 - 3809406
Alignment:
Q  106 ttggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||| | ||   ||||  ||||||||||||| |||| ||||||||| || ||||||||    
T  3809312 ttggtacgtacgacccaaggtacgaccaaccttatcctgaaaactttcc---caagccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgattg 3809406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 304
Target Start/End: Original strand, 5266595 - 5266646
Alignment:
Q  253 gaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  5266595 gaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 5266646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 5413829 - 5413904
Alignment:
Q  102 acgattggtgcgtacgacccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    ||||||| ||||||||||||||||||||| |||||||||||| |||| | |||||||||||   ||||||||||||    
T  5413829 acgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtca 5413904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 11857510 - 11857560
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  11857510 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 11857560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 14741983 - 14741933
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  14741983 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 14741933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 16839273 - 16839331
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||| | ||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  16839273 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 16839331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 22010246 - 22010196
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  22010246 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 22010196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 26954648 - 26954730
Alignment:
Q  66 ctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaa 148  Q
    ||||||| ||||||||| ||||  | |||| |||| ||| ||| ||||||||||||||||||||| |||||||||||| ||||    
T  26954648 ctgtcaagatcgtgtcatgtttcccaaaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 26954730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 30125075 - 30125025
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  30125075 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 30125025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 33329990 - 33329932
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||| | ||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  33329990 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33329932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 6026890 - 6026841
Alignment:
Q  255 aatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  6026890 aatcgtgtcacgatttccctattcttccaaaccacaaatttgaagacaat 6026841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 6005949 - 6006009
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaa 314  Q
    |||||| | ||||||| |||| || |||||||||||||||||||||||||||| |||||||    
T  6005949 aaatcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaattttcaacaaa 6006009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 33335477 - 33335429
Alignment:
Q  264 acgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  33335477 acgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33335429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 6136490 - 6136540
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||||||||||||||||||| ||||    
T  6136490 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 6136540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 21272538 - 21272460
Alignment:
Q  235 aaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
    |||||||||||||   ||||||  ||| ||||||||| || ||| |||||| |||||||||||||||||| ||||||||    
T  21272538 aaatcgtgacacgcctatgaaaatgtgtcacgatttccctgttcctccaaaacacaaatttgaagccaatatacaacaa 21272460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 23896746 - 23896836
Alignment:
Q  102 acgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatc 191  Q
    ||||||| | ||||||||| ||||||||| |||||||||||| ||||| |  |||||||| || |||||||||||| | |||| |||||||    
T  23896746 acgattgatacgtacgaccgaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatc 23896836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 22709567 - 22709636
Alignment:
Q  234 aaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||||||| |||||||   || ||||| || ||||||||| |||||||| |||||||||||||||||||    
T  22709567 aaaatcgtgtcacgttgccaaattcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaa 22709636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 305
Target Start/End: Complemental strand, 28155145 - 28155096
Alignment:
Q  256 atcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatt 305  Q
    |||||| ||||||| |||| |||||||| |||||||||||||||||||||    
T  28155145 atcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaatt 28155096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 34166723 - 34166678
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||    
T  34166723 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 34166678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 5674278 - 5674238
Alignment:
Q  263 cacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  5674278 cacgatttctctgttcttccagaccacaaatttgaagccaa 5674238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 6439026 - 6439078
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaattt 306  Q
    |||||||| |||||||||| | |||||||| |||| |||||||||||||||||    
T  6439026 aaatcgtgtcacgatttctatgttcttccagaccataaatttgaagccaattt 6439078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 9183331 - 9183393
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacg 84  Q
    ||||||||||||||||||| || || |||||||||| ||| |||||| |||||||||||||||||    
T  9183331 ctctccttcaaaatctgca-aagaaaacttatatagtagtcttcagc-gtcaaaatcgtgtcacg 9183393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 23896684 - 23896748
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacg 84  Q
    |||| ||||||||| ||||||| ||| ||||||||||||| ||||||||  ||||||||| ||||    
T  23896684 ctcttcttcaaaatatgcacaagaactcttatatagcagtcttcagctgataaaatcgtgccacg 23896748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 411740 - 411698
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||    
T  411740 tcgtgtcacgatttccctattcttccagaccacaaatttgaag 411698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 16579044 - 16579094
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  16579044 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 16579094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 16616336 - 16616286
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  16616336 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 16616286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 23896899 - 23896957
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||||| |||||||| ||| ||||| |||||||||||||||||| ||| || |||||    
T  23896899 aaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 23896957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 33342631 - 33342681
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||  | |||||||||||||||||||||||| ||||    
T  33342631 aaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaagacaat 33342681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 13150906 - 13150861
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    |||||||| ||||||||| || ||||||||| ||||||||||||||    
T  13150906 aaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 13150861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 17759494 - 17759413
Alignment:
Q  132 caaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaa 213  Q
    |||||||||||| ||||| || ||||||||  |||||| |||||| |||| ||||||||| || |||| |||  ||||||||    
T  17759494 caaccttatcctgaaaacttgtccagcaagccgaaaattgtgtcacgtttccccaaaatcgtgtcacggttgggcaccctaa 17759413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 27647524 - 27647480
Alignment:
Q  255 aatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||||||| ||||||||| || |||||||| |||||||||||||||    
T  27647524 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 27647480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 34151884 - 34151840
Alignment:
Q  255 aatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||||||| ||||||||| || ||||||||| ||||||||||||||    
T  34151884 aatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 34151840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 34164500 - 34164456
Alignment:
Q  255 aatcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||||||| ||||||||| || ||||||||| ||||||||||||||    
T  34164500 aatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 34164456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 7e-87; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 20 - 312
Target Start/End: Complemental strand, 5702245 - 5701951
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||  |||||| |||| ||||||||||||||| |     
T  5702245 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgacacgttttgccaaatcgtgacacgattggtgcgtacaat 5702146  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| ||||  | ||||||||| ||||||||||||||| ||||| |||||||| |||||||||||| ||||||   ||||    
T  5702145 ccaaggtacgaccaaccttatcctgaaaatgtacccagcaagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattgagcaccctgcaaaac 5702046  T
Q  219 catgctctctgcct-gaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    ||||||| | | || |||||||  |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  5702045 catgctcaccgtctagaaaatcaagacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattaacaaca 5701951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 20 - 249
Target Start/End: Complemental strand, 15212654 - 15212425
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||| | || ||||||||||||||||| ||||||||||| ||||||||||| |||  | |||| |||| ||| ||||||||||||||    
T  15212654 ctctccttcaaaatctgta-aagaacacttatatagcagtcttcagctgtcacaatcgtgtcacattttcctaaatcgtgacacgtttggtgcgtacgac 15212556  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaacc 219  Q
    ||||||||||| |||||||||||| ||||| ||| |||||||  ||||||||||||| |||||||||||||| || |||||||| |||||||   |||||    
T  15212555 ccaaggtacgaccaaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaacc 15212456  T
Q  220 atgctctctgcct-gaaaatcgtgacacgtt 249  Q
    |||||| |||||| |||||||||||||||||    
T  15212455 atgctcactgcctagaaaatcgtgacacgtt 15212425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 109 - 314
Target Start/End: Original strand, 4456429 - 4456635
Alignment:
Q  109 gtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaaca 207  Q
    |||||||||||||||  ||||| |||||||||| | ||||| |   ||||||||| |||||||  |||| ||||||||||| || |||||||||||| ||    
T  4456429 gtgcgtacgacccaaaatacgaccaaccttatcgtgaaaacgtattcagcaagtttgaaaatcacgtcacgttttcccaaattcgtgacacgattgagca 4456528  T
Q  208 ccctaagaaaccatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaattta 307  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||  ||    
T  4456529 ccctgagaaaccatgctccctgcctgaaaatcgtgacacgttgatgaaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaaata 4456628  T
Q  308 caacaaa 314  Q
    |||||||    
T  4456629 caacaaa 4456635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 43036291 - 43036101
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||| ||||||||||||| || |||||||||||| |||| |||||||||||||||||||||||||||  |||||| |||| ||| |||||||||||||     
T  43036291 ctctcattcaaaatctgca-aagaacacttatataacagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgat 43036193  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    |||||||||||||||||||||||| ||||| |||||| ||||| ||||||||||||| ||||| |||||||| || |||||||| |||||||    
T  43036192 ccaaggtacgatcaaccttatcctgaaaacttgcccaacaagtcgaaaatcgtgtcacgtttttccaaaatcgtgtcacgattggacaccct 43036101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 30143210 - 30143020
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||| || || ||||||||||||||||| ||||| |||||||||||||||||||||  |||||| |||| ||| ||||||||||||||    
T  30143210 ctctccttcaaaatctaca-aagaacacttatatagcagtcttcagttgtcaaaatcgtgtcacgttttgccaaatcgtgacacggttggtgcgtacgac 30143112  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    |||| |||||| |||||||||||| ||||| || ||||||||  |||||||||||||  ||||||||||||| || |||||||| |||||||    
T  30143111 ccaaagtacgaccaaccttatccttaaaacttgtccagcaagccgaaaatcgtgtcacattttcccaaaatcgtgtcacgattggacaccct 30143020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 72 - 247
Target Start/End: Complemental strand, 19175445 - 19175270
Alignment:
Q  72 aaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt-gaaaatc 170  Q
    ||||||| |||||||| ||||||| |||  ||||||||||| ||||||||||||||  | |||||||||||| ||||| | ||||||||||| |||||||    
T  19175445 aaatcgtatcacgttt-tccaaatcgtggcacgattggtgcatacgacccaaggtataaccaaccttatcctgaaaacgtacccagcaagtttgaaaatc 19175347  T
Q  171 gtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcctgaaaatcgtgacacg 247  Q
     ||||| |||||||||||||| |||||||||||| |||||| ||||||||||||| |||||||||||||||||||||    
T  19175346 atgtcacgttttcccaaaatcgtgacacgattgagcaccctgagaaaccatgctccctgcctgaaaatcgtgacacg 19175270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 23 - 149
Target Start/End: Complemental strand, 23799338 - 23799212
Alignment:
Q  23 tccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgaccca 122  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  23799338 tccttcaaaatatgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacaattggtgcgtacgaccca 23799239  T
Q  123 aggtacgatcaaccttatcctaaaaac 149  Q
    | |||||| ||||||||| ||||||||    
T  23799238 acgtacgaccaaccttattctaaaaac 23799212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 4743498 - 4743684
Alignment:
Q  26 ttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaagg 125  Q
    ||||||||||||| |  ||||||||||||||||| |||| ||||||||  ||||| ||||||  ||||||||||| ||| ||| ||||||||||||| ||    
T  4743498 ttcaaaatctgcaaagaaacacttatatagcagtcttcatctgtcaaatacgtgtgacgttttgccaaattgtgacacggttgatgcgtacgacccacgg 4743597  T
Q  126 tacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||| |||||||||||| |||||| |||| ||||||| ||||||||||||| |||| | ||||||| || |||||||| |||||||    
T  4743598 tacgaccaaccttatcctgaaaaacgtgccaagcaagtcgaaaatcgtgtcacgtttcctcaaaatcgtgtcacgattggacaccct 4743684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 211
Target Start/End: Complemental strand, 4731524 - 4731336
Alignment:
Q  22 ctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgaccc 121  Q
    |||||||||||||| || || ||||||||||||| ||| ||||||| |||||||||||||||||||  |||||| |||| ||  ||||||| |||| |||    
T  4731524 ctccttcaaaatctaca-aagaacacttatatagtagtcttcagctatcaaaatcgtgtcacgttttgccaaatcgtgacacagttggtgcctacggccc 4731426  T
Q  122 aaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||||||| ||| ||||| || ||||| || ||||||||  ||||||| |||||||||||||||||||| || |||||||| |||||||    
T  4731425 aaggtacgaccaatcttattctgaaaacgtgtccagcaagccgaaaatcatgtcatgttttcccaaaatcgtgtcacgattggacaccct 4731336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 12702938 - 12703126
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcc-aaattgtgatacgattggtgcgtacga 118  Q
    |||||||||||||| |||| || |||||||| ||| || | |||| |||||||||||||||||||||| ||| |||| |||| |||  ||||||||||||    
T  12702938 ctctccttcaaaatatgca-aagaacacttacataacaatcttcaactgtcaaaatcgtgtcacgtttttcccaaatcgtgacacgtatggtgcgtacga 12703036  T
Q  119 cccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacac 208  Q
    ||||| |||||| |||||||||||| ||| | |||  |||||| |||||||||||||| |||||||||||||| || |||||||| ||||    
T  12703037 cccaatgtacgaccaaccttatcctgaaagcttgcttagcaagctgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacac 12703126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 23799210 - 23799091
Alignment:
Q  193 tgacacgattgaacaccctaagaaaccatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaa 292  Q
    |||||||||||| |||| | ||||||||||||| |||||||||||| ||||||||||||||||||||||  ||||||||||| ||||| |||||||||||    
T  23799210 tgacacgattgagcaccttgagaaaccatgctcgctgcctgaaaattgtgacacgttgatgaaatcgtgttacgatttctctgttctttcaaaccacaaa 23799111  T
Q  293 tttgaagccaatttacaaca 312  Q
    |||||| |||||| ||||||    
T  23799110 tttgaaaccaattaacaaca 23799091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 70 - 211
Target Start/End: Original strand, 42435558 - 42435699
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||| ||||||| ||  |||||| |||| ||| ||||||||||||||||||||||||| |||||||||||| ||||| |||| ||||||  ||||||    
T  42435558 caaaatcatgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgccaagcaagacgaaaat 42435657  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||||| |||| ||||||||| || |||||||| |||||||    
T  42435658 cgtgtcacgtttccccaaaatcgtgtcacgattggacaccct 42435699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 34254628 - 34254799
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacga 118  Q
    ||||||||||||||||||| || ||||||||||||||| | |||||| ||| |||||||||||||||| |||  ||| |||  ||||||| |||||||||    
T  34254628 ctctccttcaaaatctgca-aagaacacttatatagcaatcttcagc-gtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 34254725  T
Q  119 cccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatc 191  Q
    |||||||||||| |||||||||||| |||| | ||||||||||    |||||||||||| | ||||||||||||    
T  34254726 cccaaggtacgaccaaccttatcctgaaaatcttgcccagcaatccaaaaatcgtgtcacgatttcccaaaatc 34254799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 33352014 - 33351896
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaa 123  Q
    |||||||||| |||| || || |||||||||||||| |||||||||||||||||||||||||||  ||||||  ||| ||| |||||||||| |||||||    
T  33352014 ccttcaaaatttgca-aagaaaacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcatgacacgtttggtgcgtatgacccaa 33351916  T
Q  124 ggtacgatcaaccttatcct 143  Q
    ||||||| ||||||||||||    
T  33351915 ggtacgaccaaccttatcct 33351896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 17982521 - 17982365
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacga 118  Q
    ||||||||||||||||||| || |||||||||||||| || ||| || |||||||||||||||||||| |||  ||| |||  ||||||| |||||||||    
T  17982521 ctctccttcaaaatctgca-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 17982424  T
Q  119 cccaaggtacgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtca 176  Q
     ||||||||||| ||||||||||||||||| | |||||||||||   ||||||||||||    
T  17982423 tccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtca 17982365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 1746518 - 1746701
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacga 118  Q
    |||| |||||||||||||| || |||||||||||||  || ||| || |||||||||||||||||||| |||  ||| |||  ||||||| |||||||||    
T  1746518 ctcttcttcaaaatctgca-aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 1746615  T
Q  119 cccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
     ||||||||||| |||||||||||| |||| | |||||||||||   |||||||||||| | |||||||||||| || ||||||||    
T  1746616 tccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattg 1746701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 92 - 225
Target Start/End: Complemental strand, 11383585 - 11383453
Alignment:
Q  92 aaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatc 191  Q
    |||| |||| ||| ||| |||||||||||||| |||||| |||||||||| | ||||  ||||||||||| |||||||||||||| ||||||||||||||    
T  11383585 aaatcgtgacacggttgatgcgtacgacccaaagtacgaccaaccttatcttgaaaatttgcccagcaagctgaaaatcgtgtcacgttttcccaaaatc 11383486  T
Q  192 atgacacgattgaacaccctaagaaaccatgctc 225  Q
     || ||| |||| ||||||||| |||||||||||    
T  11383485 gtgtcacaattggacaccctaa-aaaccatgctc 11383453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 34256804 - 34256987
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacga 118  Q
    ||||||||||||||||||| || ||||||||||||||| | |||||| ||| |||||||||||||||| |||  ||| |||  ||||||| |||||||||    
T  34256804 ctctccttcaaaatctgca-aagaacacttatatagcaatcttcagc-gtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 34256901  T
Q  119 cccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    |||||||||| | ||| |||||||| |||| | ||| |||||||   |||||||||||| | |||||||||||| || ||||||||    
T  34256902 cccaaggtacaaccaatcttatcctgaaaatcttgctcagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattg 34256987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 92 - 208
Target Start/End: Complemental strand, 40221343 - 40221227
Alignment:
Q  92 aaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatc 191  Q
    |||| |||| ||| |||||||||||||||||||| ||||  ||||||||||| ||||| || ||| |||| |||||||||||||| ||||||||||||||    
T  40221343 aaatcgtgacacgtttggtgcgtacgacccaaggcacgacaaaccttatcctgaaaacgtgtccaacaagctgaaaatcgtgtcacgttttcccaaaatc 40221244  T
Q  192 atgacacgattgaacac 208  Q
     ||||||||||| ||||    
T  40221243 gtgacacgattggacac 40221227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 10015023 - 10014845
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaag 124  Q
    |||||||||||||| |  |||||||| ||| |||| ||||| ||||||||  |||||||  |||  ||||| |||| ||||||| ||| |||||||||||    
T  10015023 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaatcgtgacacgattgatgcatacgacccaag 10014924  T
Q  125 gtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    |||||| ||||||||||||  |||| |||| |||| |   |||||||||||||| || ||||||||| || ||||||||    
T  10014923 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 10014845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 22976108 - 22975969
Alignment:
Q  97 gtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgac 196  Q
    |||| ||| ||||||||| |||||||| ||||||  ||||||||||| ||||| || | |||||| |||||||||||||| |||||||||||||| || |    
T  22976108 gtgacacgtttggtgcgtgcgacccaatgtacgacaaaccttatcctgaaaacttgtcaagcaagctgaaaatcgtgtcacgttttcccaaaatcgtgtc 22976009  T
Q  197 acgattgaacaccctaagaaaccatgctctctgcctgaaaa 237  Q
    ||||||| ||||||| | ||||||||| | |||||| ||||    
T  22976008 acgattggacaccctga-aaaccatgcccactgcctaaaaa 22975969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 27811100 - 27810976
Alignment:
Q  87 tgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttccca 186  Q
    |||| |||| |||| ||| ||||||||||| ||||||| ||||| |||||||||||| ||||| |||||||||||  |||||||||||||  ||||| ||    
T  27811100 tgtcaaaatcgtgacacgtttggtgcgtacaacccaagatacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacattttctca 27811001  T
Q  187 aaatcatgacacgattgaacaccct 211  Q
    ||||| || |||||||| |||||||    
T  27811000 aaatcgtgtcacgattggacaccct 27810976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 31218125 - 31217954
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgt-ccaaattgtgatacgattggtgcgtacga 118  Q
    |||| ||||||||||| || || |||||||||||||| || ||| || |||||||||||||||||||| | || ||| |||  ||||||| |||||| ||    
T  31218125 ctcttcttcaaaatctaca-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgttttttcccaatcgtgtcacgattgatgcgtatga 31218028  T
Q  119 cccaaggtacgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtcatgttttcccaaaatc 191  Q
     ||||||||||| ||||||||||||||||| | |||||| ||||   |||||||||||| | ||||||||||||    
T  31218027 tccaaggtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaaatcgtgtcacgatttcccaaaatc 31217954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 4696373 - 4696305
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttg 88  Q
    |||||||||||||||||||||| ||| |||||||| | || ||||||||||||||||||||||||||||    
T  4696373 ctctccttcaaaatctgcacaagaacccttatataacggtcttcagctgtcaaaatcgtgtcacgtttg 4696305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 4733627 - 4733503
Alignment:
Q  87 tgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttccca 186  Q
    |||| |||| |||| ||| |||||||||||||||||||||||||  |||  |||||| ||||| ||   || |||  ||||||||||||| |||||||||    
T  4733627 tgtcaaaatcgtgacacggttggtgcgtacgacccaaggtacgacaaactgtatcctgaaaacgtgtttagaaagccgaaaatcgtgtcacgttttccca 4733528  T
Q  187 aaatcatgacacgattgaacaccct 211  Q
    ||||| || ||||||||||||||||    
T  4733527 aaatcgtgtcacgattgaacaccct 4733503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 7412672 - 7412771
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||  ||||||||| ||||||| ||||||| |||  | ||||| | ||||||||    
T  7412672 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgccatgattgatacgtacgac 7412770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 4283111 - 4283041
Alignment:
Q  106 ttggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
    ||||||| ||||||||||||||||| |||||||||||| ||||| |||||||||||  |||||||||||||    
T  4283111 ttggtgcatacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtca 4283041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 19948621 - 19948777
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacga 118  Q
    ||||||||||||||||||| || |||||||||||||  || ||| || |||||||||||||||||||| |||  ||| |||  ||||||| |||||||||    
T  19948621 ctctccttcaaaatctgca-aagaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacga 19948718  T
Q  119 cccaaggtacgatcaaccttatcctaaaaa-catgcccagcaagttgaaaatcgtgtca 176  Q
     ||||||||||| ||| |||||| |||||| | || ||||||||   ||||||||||||    
T  19948719 tccaaggtacgaccaaacttatcataaaaatcttgtccagcaagccaaaaatcgtgtca 19948777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 4456360 - 4456419
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtg 79  Q
    |||| ||||||||||||||||| |||||||||||||| || |||||||||||||||||||    
T  4456360 ctcttcttcaaaatctgcacaagaacacttatatagccgtcttcagctgtcaaaatcgtg 4456419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 4696307 - 4696250
Alignment:
Q  106 ttggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagtt 163  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| |||||| ||||||    
T  4696307 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagtt 4696250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 211
Target Start/End: Original strand, 1345714 - 1345860
Alignment:
Q  66 ctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggt--acgatcaaccttatcctaaaaacatgcccagcaagtt 163  Q
    ||||||||||||||||||||||    |||  |||| | | ||| |||||||||||||||||  |||| |||||||||||| ||||| || | |||||| |    
T  1345714 ctgtcaaaatcgtgtcacgtttcctaaaaccgtgacatggttgatgcgtacgacccaaggtgtacgaccaaccttatcctgaaaacgtgtcaagcaagct 1345813  T
Q  164 gaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    |||||| ||||||  ||||| | ||||| || ||||||||||||||||    
T  1345814 gaaaattgtgtcacattttctc-aaatcgtgtcacgattgaacaccct 1345860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 10688677 - 10688625
Alignment:
Q  252 tgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  10688677 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 10688625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 39784382 - 39784330
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaattt 306  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  39784382 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaattt 39784330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 3051453 - 3051574
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaatt-gtgatacgattggtgcgtacga 118  Q
    ||||| ||||||||||||| |  ||||||||||||| | | | ||||| ||||||| |||||||| ||| ||||||| |||  ||||||| ||| |||||    
T  3051453 ctctctttcaaaatctgcatagaaacacttatatagtactctgcagctatcaaaattgtgtcacgattg-ccaaattcgtgtcacgattgatgcatacga 3051551  T
Q  119 cccaaggtacgatcaaccttatc 141  Q
    ||||| |||||| ||||||||||    
T  3051552 cccaatgtacgaccaaccttatc 3051574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 4759591 - 4759541
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  4759591 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 4759541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 7412894 - 7412952
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||||| |||||||||||| |||||||||||||||||||||||| ||| || |||||    
T  7412894 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtcaaatttcaaca 7412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 10683796 - 10683746
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  10683796 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 10683746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 18870078 - 18870028
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  18870078 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 18870028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 19945720 - 19945822
Alignment:
Q  102 acgattggtgcgtacgacccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacga 200  Q
    ||||||| ||||||||| |||||||||||||||||||||||| |||| | | |||| ||||   |||||||||||| | ||||| |||||| || |||||    
T  19945720 acgattgatgcgtacgatccaaggtacgatcaaccttatcctgaaaatcttccccaacaagccaaaaatcgtgtcacgatttcctaaaatcgtgtcacga 19945819  T
Q  201 ttg 203  Q
    |||    
T  19945820 ttg 19945822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 25327721 - 25327671
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  25327721 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 25327671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 30656225 - 30656275
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  30656225 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 30656275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 33037344 - 33037294
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  33037344 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 33037294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 35745921 - 35745979
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||| | ||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  35745921 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 35745979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 36979957 - 36980007
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  36979957 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 36980007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 3439144 - 3439095
Alignment:
Q  255 aatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| ||||    
T  3439144 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaat 3439095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 19175515 - 19175458
Alignment:
Q  21 tctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgt 78  Q
    |||||||||||| ||| |||| |||||||||||| |||| ||||||||||||||||||    
T  19175515 tctccttcaaaaactgtacaagaacacttatataacagtcttcagctgtcaaaatcgt 19175458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 27811143 - 27811088
Alignment:
Q  23 tccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtg 79  Q
    ||||||||||| |||| || ||||||||||||||||| |||||||||||||||||||    
T  27811143 tccttcaaaatatgca-aagaacacttatatagcagtcttcagctgtcaaaatcgtg 27811088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 304
Target Start/End: Complemental strand, 25689619 - 25689568
Alignment:
Q  253 gaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||| ||||    
T  25689619 gaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagacaat 25689568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 6311878 - 6311928
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| || ||||||||| |||||||| ||||||||||||||||||||    
T  6311878 aaatcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaat 6311928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 15290200 - 15290150
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||||||||||||||||||| ||||    
T  15290200 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 15290150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 15470569 - 15470519
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||||||||||||||||||| ||||    
T  15470569 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 15470519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 18852684 - 18852634
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||  |||||||||||| |||||||| ||||||||||||||||||||    
T  18852684 aaatcgtatcacgatttctctgttcttccagaccacaaatttgaagccaat 18852634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 31042963 - 31042921
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||||| ||||||||||||||||||||| |||||||||||||||    
T  31042963 tcgtgtcacgatttctctattcttccagaccacaaatttgaag 31042921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 42498002 - 42497900
Alignment:
Q  102 acgattggtgcgtacgacccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacga 200  Q
    ||||||| |||||| ||||||||||||||  ||||||||||| |||| | |||||||||||   | ||||||||||   |||||||||||| || |||||    
T  42498002 acgattgatgcgtaggacccaaggtacgactaaccttatcctgaaaatcttgcccagcaagccaataatcgtgtcacaatttcccaaaatcgtgtcacga 42497903  T
Q  201 ttg 203  Q
    |||    
T  42497902 ttg 42497900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 42575852 - 42575902
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||||||||||||||||||| ||||    
T  42575852 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 42575902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 44303722 - 44303566
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacga 118  Q
    ||||| ||||||||||||| || |||||||||||||| || ||| || ||| ||||||||||||| || |||  ||| |||  || |||| |||||| ||    
T  44303722 ctctctttcaaaatctgca-aagaacacttatatagctgtcttctgc-gtcgaaatcgtgtcacgattttccccaatcgtgccacaattgatgcgtatga 44303625  T
Q  119 cccaaggtacgatcaaccttatcct-aaaaacatgcccagcaagttgaaaatcgtgtca 176  Q
     ||||||||||| ||||||||||||  ||| | |||||||||||   ||||||||||||    
T  44303624 tccaaggtacgaccaaccttatcctggaaatcttgcccagcaagccaaaaatcgtgtca 44303566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 4733675 - 4733610
Alignment:
Q  20 ctctccttcaaaatctgcacaat-aacacttatatagcagttttcagctgtcaaaatcgtgtcacg 84  Q
    ||||||||||||||||||| ||  ||||||||||||| ||| |||| |||||||||||||| ||||    
T  4733675 ctctccttcaaaatctgcaaaaagaacacttatatagtagtcttcaactgtcaaaatcgtgacacg 4733610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 33351888 - 33351812
Alignment:
Q  172 tgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcct-gaaaatcgtgacacg 247  Q
    |||||||||||||||||||| || |||||||| |||||||   |||||||| || ||||||  ||||||||||||||    
T  33351888 tgtcatgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatgttcactgcctaaaaaatcgtgacacg 33351812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 285
Target Start/End: Complemental strand, 4283002 - 4282951
Alignment:
Q  234 aaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaa 285  Q
    |||||||||||||  | ||||||||||| || ||||||||||||||||||||    
T  4283002 aaaatcgtgacacacttatgaaatcgtgtcatgatttctctattcttccaaa 4282951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 2627373 - 2627327
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| ||||||||| || |||||||| |||||||||||||||||||    
T  2627373 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 2627327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 7289484 - 7289434
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||| |||||||| |||||||| ||||||||||||||| ||||    
T  7289484 aaatcgtgtcactatttctctgttcttccagaccacaaatttgaagtcaat 7289434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 26288462 - 26288504
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||||| |||||||||||| |||||||| |||||||||||||||    
T  26288462 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26288504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 26301719 - 26301761
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||||| |||||||||||| |||||||| |||||||||||||||    
T  26301719 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26301761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 26313713 - 26313755
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaag 299  Q
    ||||| |||||||||||| |||||||| |||||||||||||||    
T  26313713 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26313755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 19945660 - 19945722
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacg 84  Q
    ||||||||||||||||||| || |||||||||||||| || ||| || |||||||||||| ||||    
T  19945660 ctctccttcaaaatctgca-aagaacacttatatagctgtcttctgc-gtcaaaatcgtgccacg 19945722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 42498062 - 42498000
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacg 84  Q
    ||||||||||||||||||| || |||| |||||||||||| |||||| ||| ||||| |||||||    
T  42498062 ctctccttcaaaatctgca-aagaacagttatatagcagtcttcagc-gtcgaaatcatgtcacg 42498000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 20715 - 20905
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||||||||||||||| || |||||||||||| |||||||||||| |||||||||||| ||||||  |||||| |||| ||| || |||||||||||    
T  20715 ctctccttcaaaatctgca-aagaacacttatataacagttttcagctatcaaaatcgtgttacgttttgccaaatcgtgacacgtttagtgcgtacgac 20813  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||||||||| ||||||||| |||||||| | |||| ||||  ||||||||||||| |||||||||||||| || || ||||| |||||||    
T  20814 ccaaggtacgaccaaccttattctaaaaactttcccaacaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcatgattggacaccct 20905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 93; Significance: 4e-45; HSPs: 3)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 36597 - 36406
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||  ||||||||| ||||||| ||||||| |||  | ||||||||||||||||    
T  36597 ctctccttcaaaatctgcacaagaacacttttatagcagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgccatgattggtgcgtacgac 36499  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||||||||||| |||||||||||| ||||| | ||||||||| |||||||| |||||| |||||| ||||||| || |||||||  |||||||    
T  36498 ccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaattgtgtcacgttttcacaaaatcgtgccacgatttgacaccct 36406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 20 - 314
Target Start/End: Complemental strand, 43726 - 43432
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||| |||||||||||||| ||||||||||||||||| ||||||||  ||||||||| ||||||| ||||||| |||  ||||||| | | ||||||    
T  43726 ctctcctccaaaatctgcacaaaaacacttatatagcagtattcagctgataaaatcgtgccacgttt-tccaaatcgtgccacgattgatacatacgac 43628  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaac 218  Q
    ||||||||||| |||||||||||| ||||| |  |||||||| ||||||||| ||||| | |||| ||||||| |  |||||||  |||||||   ||||    
T  43627 ccaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcatgtcacgatttcacaaaatcgtaccacgatttgacaccct-gtaaac 43529  T
Q  219 catgctctctgcct--gaaaatcgtgacacgttgatgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaacaaa 314  Q
    || |||| |  | |   ||||||||| |||| ||    ||||||| |||||||||||||||||||||||||| |||||||||||||| || |||||||    
T  43528 ca-gctcacgacattacaaaatcgtgtcacgatgccacaatcgtgtcacgatttctctattcttccaaaccataaatttgaagccaaattccaacaaa 43432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 313
Target Start/End: Complemental strand, 36370 - 36323
Alignment:
Q  266 gatttctctattcttccaaaccacaaatttgaagccaatttacaacaa 313  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  36370 gatttctctgttcttccaaaccacaaatttgaagccaattttcaacaa 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 86066 - 86212
Alignment:
Q  165 aaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcctgaaaatcgtgacacgttgatgaaatcgtgcca 264  Q
    |||||||||||| |||||||||||||| || || |||||| ||||||   ||||||||||| ||||||| ||||||||||||||||||||||||||| ||    
T  86066 aaaatcgtgtcacgttttcccaaaatcgtg-catgattgagcaccctgc-aaaccatgctccctgcctggaaatcgtgacacgttgatgaaatcgtgtca 86163  T
Q  265 cgatttctctattcttccaaaccac-aaatttgaagccaatttacaaca 312  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  86164 cgatttctctattcttccaaaccacaaaatttgaagccaatatacaaca 86212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 86018 - 86082
Alignment:
Q  23 tccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgttt 87  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||    
T  86018 tccttcaaaatctgcacaagaacacttatatagcagtcttcagttgtcaaaatcgtgtcacgttt 86082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 70 - 241
Target Start/End: Original strand, 80850 - 81021
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||||| ||  |||||| |||| ||| ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||  ||||||    
T  80850 caaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaat 80949  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcct-gaaaatcgt 241  Q
    |||| || |||||||||||||| || |||||||| | ||||| | |||| |||||| |||||| |||||||||    
T  80950 cgtgccacgttttcccaaaatcgtgtcacgattggataccctga-aaacaatgctcactgcctagaaaatcgt 81021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 70 - 274
Target Start/End: Complemental strand, 11159 - 10954
Alignment:
Q  70 caaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaat 169  Q
    ||||||||||||||| ||  |||||| |||| ||| |||||||||||||||||| |||||| |||||||||||| ||||| ||||||||||   ||||||    
T  11159 caaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaat 11060  T
Q  170 cgtgtcatgttttcccaaaatcatgacacgattgaacaccctaagaaaccatgctctctgcct--gaaaatcgtgacacgttgatgaaatcgtgccacga 267  Q
    |||||||  ||| ||||||||| || |||||||| |||||||   ||| ||||||| | || |   ||||||||||||||   ||||||||||| |||||    
T  11059 cgtgtcacatttccccaaaatcgtgtcacgattggacaccct-gcaaaacatgctcacggcattgcaaaatcgtgacacgcctatgaaatcgtgtcacga 10961  T
Q  268 tttctct 274  Q
    |||||||    
T  10960 tttctct 10954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 211
Target Start/End: Original strand, 45539 - 45722
Alignment:
Q  28 caaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgacccaaggta 127  Q
    |||||| ||||||| |||||||| ||| || | ||||||||  ||||||||| ||||||| ||||||| |||  ||||||| |  |||||||||||||||    
T  45539 caaaatttgcacaagaacacttaaataccaatcttcagctgataaaatcgtgccacgttt-tccaaatcgtgtcacgattgatatgtacgacccaaggta 45637  T
Q  128 cgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattgaacaccct 211  Q
    ||| |||||||||||| ||||| |  |||||||| ||||||||||||||| | |||| || |||| || |||||||  |||||||    
T  45638 cgaccaaccttatcctgaaaacttagccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccct 45722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 45746 - 45795
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||    
T  45746 aaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 45795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 211
Target Start/End: Original strand, 17630 - 17754
Alignment:
Q  87 tgtccaaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaatcgtgtcatgttttccca 186  Q
    |||| |||| |||| ||| |||||||||||||| || ||||||| |||||||||| | ||| | |||||||||||   |||||||||||| |||||||||    
T  17630 tgtcaaaatcgtgacacgtttggtgcgtacgactcagggtacgaccaaccttatcatgaaagcttgcccagcaagccaaaaatcgtgtcacgttttccca 17729  T
Q  187 aaatcatgacacgattgaacaccct 211  Q
    ||||| || |||| ||| |||||||    
T  17730 aaatcgtgtcacggttggacaccct 17754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 17589 - 17651
Alignment:
Q  25 cttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttg 88  Q
    ||||||||||| || || ||||||||||||||||||||||||||||||||||||| ||||||||    
T  17589 cttcaaaatctaca-aagaacacttatatagcagttttcagctgtcaaaatcgtgacacgtttg 17651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 176
Target Start/End: Complemental strand, 6929 - 6822
Alignment:
Q  70 caaaatcgtgtcacgtttgtc-caaattgtgatacgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaagttgaaaa 168  Q
    ||||||||| ||||||||  | ||||| |||| | | ||||||||||||||||||||||| | |||||||||||| ||||| | || |||||||||||||    
T  6929 caaaatcgtatcacgttttccacaaatcgtgacatggttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacgttcctagcaagttgaaaa 6830  T
Q  169 tcgtgtca 176  Q
    ||||||||    
T  6829 tcgtgtca 6822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 434397 - 434217
Alignment:
Q  24 ccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgatacgattggtgcgtacgaccca 122  Q
    ||||||||||||||| || ||||||| |||||| || ||| || |||||||||||| ||||||| |||  ||| |||  ||||||  ||||||||| |||    
T  434397 ccttcaaaatctgca-aagaacacttttatagcggtcttctgc-gtcaaaatcgtgccacgtttttccccaatcgtgccacgatttatgcgtacgatcca 434300  T
Q  123 aggtacgatcaaccttatcct-aaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatcatgacacgattg 203  Q
    |||||||| |||||||||||| |||| | |||||||||||    |||||||||||| | |||||||||||| || ||||||||    
T  434299 aggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattg 434217  T

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Target: scaffold0140 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 8182 - 8026
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||| | ||| |||||||  |||||||| ||| |||| ||||||||  |||||| || |||| || || |||| |||  ||||||| | ||||||||    
T  8182 ctctcctccgaaaactgcacacgaacacttaaataccagtcttcagctgataaaatcatgccacgattttc-aaatcgtgtcacgattgatacgtacgac 8084  T
Q  120 ccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtca 176  Q
    ||||||||||| |||||||||||| ||||| |  ||| |||| |||||||||||||||    
T  8083 ccaaggtacgaccaaccttatcctgaaaacttaaccaacaagtttgaaaatcgtgtca 8026  T

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Target: scaffold0140; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 7966 - 7920
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| ||||| || |||||||||||||||||||    
T  7966 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 7920  T

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Target: scaffold1455 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 1766 - 1714
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaattt 306  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  1766 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaattt 1714  T

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Target: scaffold0665 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 8214 - 8266
Alignment:
Q  252 tgaaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  8214 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 8266  T

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Target: scaffold0464 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 888 - 940
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaattt 306  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  888 aaatcgtgtcacgatttctctgttcttccataccacaaatttgaagccaattt 940  T

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Target: scaffold0355 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 3394 - 3344
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  3394 aaatcgtgtcacgatttctcttttcttccagaccacaaatttgaagccaat 3344  T

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Target: scaffold0135 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 34611 - 34561
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  34611 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 34561  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 114433 - 114288
Alignment:
Q  42 taacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtcca--aattgtgatacgattggtgcgtacgacccaaggtacgatcaacctta 139  Q
    |||||||||||||||||  ||||||  || |||||||||||||||| ||||  ||| |||  |||| || ||||||||||||||||||| | ||||||||    
T  114433 taacacttatatagcagccttcagca-tcgaaatcgtgtcacgttt-tccatcaatcgtgtcacgagtgatgcgtacgacccaaggtaccaccaacctta 114336  T
Q  140 tcct-aaaaacatgcccagcaagttgaaaatcgtgtcatgttttcccaa 187  Q
    |||| ||||   |||||||||||   |||||||||||| ||||||||||    
T  114335 tcctgaaaattttgcccagcaag-ccaaaatcgtgtcacgttttcccaa 114288  T

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Target: scaffold0510 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 1294 - 1204
Alignment:
Q  102 acgattggtgcgtacgacccaaggtacgatcaaccttatcctaaaaacatgcccagcaag-ttgaaaatcgtgtcatgttttcccaaaatc 191  Q
    ||||||| | ||||||||| ||||||||| |||||||||||| ||||| |  |||||||| || |||||||||||| | |||| |||||||    
T  1294 acgattgatacgtacgaccgaaggtacgaccaaccttatcctgaaaacttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatc 1204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 1141 - 1083
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||||| |||||||| ||| ||||| |||||||||||||||||| ||| || |||||    
T  1141 aaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 9253 - 9299
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||    
T  9253 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 11698 - 11744
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| ||||||| |||||||||||    
T  11698 tcgtgtcacgatttctctgttcttccagaccacaattttgaagccaa 11744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 18721 - 18663
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatttacaaca 312  Q
    |||||| | ||||||| |||| |||| |||||||||||||||||||||||||| |||||    
T  18721 aaatcgcgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 18663  T

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Target: scaffold0188 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 17486 - 17440
Alignment:
Q  257 tcgtgccacgatttctctattcttccaaaccacaaatttgaagccaa 303  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||    
T  17486 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 17440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 1796 - 1745
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatt 305  Q
    |||||||| ||||||| |||| |||||||||||||| ||||||||| |||||    
T  1796 aaatcgtgacacgattcctctgttcttccaaaccactaatttgaagtcaatt 1745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 148501 - 148450
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaatt 305  Q
    |||||||| ||||||| |||| |||||||||||||| ||||||||| |||||    
T  148501 aaatcgtgacacgattcctctgttcttccaaaccactaatttgaagtcaatt 148450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 775 - 666
Alignment:
Q  20 ctctccttcaaaatctgcacaataacacttatatagcagttttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgatacgattggtgcgtacgac 119  Q
    ||||||| |||||||||||||| |||||||| |||  ||| |||  |||  |||||||||||||| || ||||||| |||  || |||||| |||||| |    
T  775 ctctcctccaaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatt-tccaaatcgtgtcacaattggtacgtacgtc 677  T
Q  120 ccaaggtacga 130  Q
     ||||||||||    
T  676 acaaggtacga 666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 4253 - 4303
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  4253 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 4303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 3128 - 3178
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  3128 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 3178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 5916 - 5866
Alignment:
Q  254 aaatcgtgccacgatttctctattcttccaaaccacaaatttgaagccaat 304  Q
    |||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  5916 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 5866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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