View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0941_high_25 (Length: 433)
Name: NF0941_high_25
Description: NF0941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0941_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 399; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 30 - 428
Target Start/End: Complemental strand, 6032801 - 6032403
Alignment:
| Q |
30 |
aattttatgttttgaaacagtgaaacaattatcaaataaagaaaaacactagttacctgatgatagattcattcttgatattgcagaaaagttggatctt |
129 |
Q |
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| T |
6032801 |
aattttatgttttgaaacagtgaaacaattatcaaataaagaaaaacactagttacctgatgatagattcattcttgatattgcagaaaagttggatctt |
6032702 |
T |
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| Q |
130 |
ccagtggcagcatcattgttattattattagcatcccaatttggtgataacattggagagtcatgatcaaaactagcttccttagggatcaaattagtgt |
229 |
Q |
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| T |
6032701 |
ccagtggcagcatcattgttattattattagcatcccaatttggtgataacattggagagtcatgatcaaaactagcttccttagggatcaaattagtgt |
6032602 |
T |
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| Q |
230 |
tttgttgataatgatgagaagaagatttcttcaactttctcttaatcacaatagattcctcaatgaagttaaagatatcatctctttgaagtgattttga |
329 |
Q |
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| T |
6032601 |
tttgttgataatgatgagaagaagatttcttcaactttctcttaatcacaatagattcctcaatgaagttaaagatatcatctctttgaagtgattttga |
6032502 |
T |
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| Q |
330 |
agtttcatcttcattaggcatcaattgatgaaggatttgttgattttgatcaatttcaggatatttttctttcaaatcttcttgcatcttcatctcact |
428 |
Q |
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| T |
6032501 |
agtttcatcttcattaggcatcaattgatgaaggatttgttgattttgatcaatttcaggatatttttctttcaaatcttcttgcatcttcatctcact |
6032403 |
T |
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