View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0941_high_64 (Length: 264)
Name: NF0941_high_64
Description: NF0941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0941_high_64 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 29 - 264
Target Start/End: Original strand, 1492688 - 1492923
Alignment:
| Q |
29 |
accataaagtaatatacaaaatggctatcatatgataagataagaattgaagtggcaattgaagtttgtgtatacagctactatctcactataccaagtt |
128 |
Q |
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| T |
1492688 |
accataaagtaatatacaaagtggctatcatatgataagataagaattgaagtggccattgaagtttgtgtatacagctactatctcactataccaagtt |
1492787 |
T |
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| Q |
129 |
atatatagaaaaaggaccttacactatgtgtgggaccatactaggtttctatgtataacataaatttaatatgcacttttaataaagaagtagtatcacc |
228 |
Q |
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| T |
1492788 |
atatatagaaaaaggaccttacactatgtgtgggaccatactaggtttctatgtataacataaatttaatatgcacttttaataaagaagtagtatcacc |
1492887 |
T |
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| Q |
229 |
acacttcaagagcttccacttcaacctcatcacaca |
264 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
1492888 |
acacttcaagagcttccacttcaacctcatcacaca |
1492923 |
T |
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