View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0941_low_13 (Length: 521)

Name: NF0941_low_13
Description: NF0941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0941_low_13
NF0941_low_13
[»] chr2 (44 HSPs)
chr2 (389-508)||(19251471-19251590)
chr2 (385-502)||(22263188-22263305)
chr2 (385-497)||(23854684-23854797)
chr2 (389-508)||(26236127-26236247)
chr2 (389-508)||(19251728-19251847)
chr2 (385-503)||(17850583-17850701)
chr2 (387-503)||(23806215-23806332)
chr2 (385-508)||(34548570-34548693)
chr2 (389-508)||(22263449-22263571)
chr2 (389-503)||(17463354-17463469)
chr2 (389-503)||(26236358-26236472)
chr2 (400-508)||(26135828-26135937)
chr2 (394-508)||(26560812-26560928)
chr2 (386-502)||(42670714-42670833)
chr2 (389-508)||(17850844-17850964)
chr2 (385-503)||(15106330-15106447)
chr2 (389-507)||(20498747-20498864)
chr2 (387-508)||(42670977-42671099)
chr2 (389-502)||(33290313-33290425)
chr2 (389-508)||(15106067-15106187)
chr2 (389-502)||(26560556-26560668)
chr2 (385-503)||(30390455-30390574)
chr2 (455-508)||(23854924-23854977)
chr2 (389-508)||(13254497-13254617)
chr2 (388-500)||(30958683-30958795)
chr2 (389-443)||(12419046-12419100)
chr2 (389-443)||(12431106-12431160)
chr2 (386-508)||(17463089-17463211)
chr2 (389-495)||(30959943-30960049)
chr2 (387-436)||(23855025-23855074)
chr2 (388-441)||(26136143-26136196)
chr2 (389-445)||(39878103-39878158)
chr2 (394-445)||(13254758-13254809)
chr2 (389-436)||(23046707-23046754)
chr2 (387-445)||(13284735-13284793)
chr2 (458-508)||(23806022-23806072)
chr2 (387-445)||(44098944-44099002)
chr2 (380-445)||(39878395-39878459)
chr2 (400-435)||(44999363-44999398)
chr2 (394-441)||(44999435-44999481)
chr2 (454-500)||(20499011-20499057)
chr2 (383-445)||(33290043-33290105)
chr2 (389-438)||(13284412-13284461)
chr2 (464-508)||(13284484-13284528)
[»] chr8 (38 HSPs)
chr8 (387-508)||(14820293-14820414)
chr8 (389-508)||(10108370-10108490)
chr8 (380-508)||(5554859-5554989)
chr8 (388-503)||(43851664-43851779)
chr8 (389-502)||(10108634-10108748)
chr8 (389-502)||(14820558-14820672)
chr8 (389-502)||(21147936-21148051)
chr8 (397-508)||(42112993-42113104)
chr8 (389-502)||(5555133-5555247)
chr8 (394-508)||(17623145-17623259)
chr8 (389-500)||(30789773-30789885)
chr8 (389-503)||(10171406-10171521)
chr8 (389-503)||(2583583-2583699)
chr8 (389-503)||(17622890-17623002)
chr8 (381-502)||(14767498-14767621)
chr8 (389-508)||(21148194-21148314)
chr8 (400-508)||(30789519-30789627)
chr8 (378-508)||(7689513-7689643)
chr8 (389-503)||(7689786-7689901)
chr8 (386-441)||(18044153-18044208)
chr8 (383-445)||(40487736-40487798)
chr8 (389-500)||(42606019-42606131)
chr8 (389-443)||(20877069-20877123)
chr8 (457-507)||(42605822-42605872)
chr8 (394-503)||(22494647-22494756)
chr8 (389-445)||(26136685-26136741)
chr8 (382-445)||(35367403-35367466)
chr8 (389-508)||(42113242-42113359)
chr8 (457-503)||(26136948-26136994)
chr8 (389-499)||(43481581-43481693)
chr8 (389-445)||(1949652-1949708)
chr8 (455-503)||(28977686-28977734)
chr8 (386-508)||(2583317-2583440)
chr8 (385-436)||(44162659-44162710)
chr8 (389-443)||(8106076-8106130)
chr8 (389-503)||(20875698-20875811)
chr8 (454-503)||(26532849-26532898)
chr8 (385-445)||(39888477-39888537)
[»] chr6 (27 HSPs)
chr6 (389-508)||(32017762-32017881)
chr6 (389-503)||(18500315-18500429)
chr6 (388-508)||(9481181-9481302)
chr6 (388-503)||(26385277-26385393)
chr6 (394-508)||(19284134-19284249)
chr6 (394-508)||(26385532-26385647)
chr6 (389-507)||(30617967-30618081)
chr6 (389-508)||(24731935-24732058)
chr6 (389-503)||(24732201-24732315)
chr6 (389-508)||(9854145-9854263)
chr6 (400-503)||(33714494-33714602)
chr6 (394-444)||(10321738-10321788)
chr6 (412-499)||(3230129-3230217)
chr6 (392-498)||(9154882-9154990)
chr6 (389-441)||(18500655-18500707)
chr6 (385-445)||(21069510-21069570)
chr6 (454-508)||(33637625-33637679)
chr6 (384-445)||(34884552-34884613)
chr6 (389-445)||(2299635-2299691)
chr6 (454-502)||(9481446-9481494)
chr6 (402-445)||(2299353-2299396)
chr6 (458-508)||(2299567-2299617)
chr6 (455-500)||(14680949-14680994)
chr6 (455-508)||(17142744-17142797)
chr6 (383-440)||(33637844-33637901)
chr6 (389-445)||(21070859-21070915)
chr6 (455-495)||(30618232-30618272)
[»] chr4 (53 HSPs)
chr4 (385-508)||(15640712-15640835)
chr4 (394-508)||(38574226-38574341)
chr4 (389-508)||(37012965-37013084)
chr4 (394-508)||(35376168-35376282)
chr4 (394-508)||(3018016-3018132)
chr4 (394-508)||(9618985-9619100)
chr4 (389-503)||(38573969-38574083)
chr4 (389-500)||(9619245-9619357)
chr4 (379-508)||(31943940-31944070)
chr4 (389-497)||(9396968-9397076)
chr4 (391-502)||(37012709-37012821)
chr4 (389-508)||(46046682-46046801)
chr4 (394-508)||(9396704-9396819)
chr4 (385-503)||(9516606-9516725)
chr4 (387-508)||(9516868-9516990)
chr4 (389-499)||(12904747-12904857)
chr4 (388-501)||(26252502-26252616)
chr4 (394-503)||(34063987-34064097)
chr4 (392-508)||(48580124-48580241)
chr4 (385-508)||(3273878-3274000)
chr4 (389-508)||(13132199-13132317)
chr4 (389-508)||(3273621-3273742)
chr4 (394-503)||(35376391-35376500)
chr4 (374-503)||(46046415-46046539)
chr4 (389-445)||(31218303-31218359)
chr4 (389-445)||(36887680-36887736)
chr4 (385-445)||(43313533-43313593)
chr4 (387-503)||(31090058-31090176)
chr4 (385-496)||(48260021-48260132)
chr4 (389-502)||(3018276-3018388)
chr4 (394-508)||(15640973-15641089)
chr4 (389-508)||(31090319-31090439)
chr4 (384-508)||(41947114-41947237)
chr4 (394-508)||(7819020-7819134)
chr4 (457-508)||(26252337-26252388)
chr4 (389-503)||(31944213-31944328)
chr4 (389-444)||(41946965-41947020)
chr4 (394-508)||(4355887-4356001)
chr4 (454-508)||(18713026-18713080)
chr4 (389-429)||(18667628-18667668)
chr4 (389-445)||(48259823-48259879)
chr4 (394-445)||(13131945-13131996)
chr4 (392-502)||(4356145-4356255)
chr4 (389-502)||(18713224-18713340)
chr4 (455-501)||(31083362-31083408)
chr4 (454-508)||(34064240-34064294)
chr4 (389-503)||(36888943-36889056)
chr4 (389-429)||(50462734-50462774)
chr4 (389-445)||(53896446-53896502)
chr4 (457-503)||(20068518-20068564)
chr4 (458-503)||(7819277-7819322)
chr4 (389-445)||(12904906-12904962)
chr4 (392-440)||(48579869-48579917)
[»] chr1 (46 HSPs)
chr1 (387-507)||(39711072-39711191)
chr1 (389-508)||(18462286-18462405)
chr1 (389-503)||(39711335-39711450)
chr1 (389-502)||(17606572-17606684)
chr1 (389-503)||(4906962-4907077)
chr1 (389-508)||(24467629-24467748)
chr1 (389-502)||(20995932-20996045)
chr1 (388-508)||(48071960-48072081)
chr1 (385-500)||(39826312-39826428)
chr1 (389-508)||(52058266-52058386)
chr1 (389-508)||(29696565-29696684)
chr1 (389-503)||(34749138-34749252)
chr1 (389-503)||(8293070-8293186)
chr1 (384-503)||(33628685-33628805)
chr1 (389-507)||(33628949-33629068)
chr1 (385-508)||(42510011-42510134)
chr1 (389-508)||(4907220-4907340)
chr1 (385-508)||(8292800-8292924)
chr1 (377-508)||(17606292-17606428)
chr1 (387-508)||(39970903-39971026)
chr1 (385-508)||(24467885-24468006)
chr1 (389-503)||(27039638-27039752)
chr1 (388-508)||(52058010-52058131)
chr1 (389-508)||(30299232-30299351)
chr1 (385-503)||(30299494-30299613)
chr1 (389-503)||(39826050-39826165)
chr1 (385-443)||(17502053-17502111)
chr1 (389-503)||(29696821-29696935)
chr1 (454-508)||(43539413-43539467)
chr1 (389-497)||(48072230-48072339)
chr1 (385-507)||(34749364-34749487)
chr1 (414-503)||(30252161-30252251)
chr1 (388-445)||(18342339-18342396)
chr1 (389-445)||(20995698-20995754)
chr1 (389-445)||(43539669-43539725)
chr1 (394-508)||(18462542-18462657)
chr1 (390-441)||(42510341-42510392)
chr1 (384-440)||(13230059-13230115)
chr1 (389-445)||(17500769-17500825)
chr1 (389-445)||(43400753-43400809)
chr1 (455-502)||(16294211-16294258)
chr1 (392-443)||(37236721-37236772)
chr1 (458-508)||(7473862-7473912)
chr1 (386-439)||(21091786-21091839)
chr1 (454-503)||(39970712-39970761)
chr1 (389-445)||(26271207-26271263)
[»] chr5 (40 HSPs)
chr5 (389-508)||(14143902-14144021)
chr5 (385-508)||(41001611-41001734)
chr5 (380-508)||(23979159-23979288)
chr5 (386-502)||(7125915-7126031)
chr5 (389-508)||(20709470-20709589)
chr5 (380-503)||(17762545-17762669)
chr5 (389-508)||(6817123-6817242)
chr5 (389-507)||(17762283-17762401)
chr5 (389-508)||(7126175-7126295)
chr5 (389-508)||(24074303-24074423)
chr5 (389-503)||(24837169-24837284)
chr5 (393-508)||(27159215-27159328)
chr5 (383-508)||(14411691-14411817)
chr5 (379-502)||(14144165-14144289)
chr5 (389-508)||(24837427-24837547)
chr5 (388-502)||(31799639-31799754)
chr5 (389-503)||(30512288-30512402)
chr5 (389-503)||(30552628-30552742)
chr5 (386-502)||(18336720-18336836)
chr5 (389-502)||(27158991-27159104)
chr5 (394-508)||(29444811-29444926)
chr5 (389-503)||(4918989-4919105)
chr5 (387-508)||(18336465-18336588)
chr5 (394-508)||(4919248-4919362)
chr5 (389-502)||(29445070-29445183)
chr5 (394-503)||(993755-993862)
chr5 (455-508)||(6817379-6817432)
chr5 (403-500)||(41001370-41001465)
chr5 (389-508)||(24650957-24651077)
chr5 (385-507)||(994005-994127)
chr5 (394-508)||(31799898-31800012)
chr5 (389-502)||(24074566-24074682)
chr5 (389-508)||(22571077-22571197)
chr5 (394-498)||(24650707-24650810)
chr5 (456-503)||(32233967-32234014)
chr5 (389-503)||(14411929-14412043)
chr5 (454-508)||(20709278-20709332)
chr5 (389-435)||(41424516-41424562)
chr5 (389-445)||(28070466-28070522)
chr5 (389-441)||(41425778-41425830)
[»] chr3 (54 HSPs)
chr3 (383-502)||(14162135-14162254)
chr3 (389-503)||(9266975-9267090)
chr3 (389-508)||(30500299-30500418)
chr3 (394-508)||(52552946-52553061)
chr3 (389-508)||(14262294-14262414)
chr3 (389-502)||(30500043-30500155)
chr3 (387-502)||(5800869-5800984)
chr3 (389-508)||(14171844-14171964)
chr3 (389-502)||(19112764-19112879)
chr3 (389-508)||(33372406-33372526)
chr3 (389-508)||(9267233-9267352)
chr3 (389-502)||(16722255-16722369)
chr3 (388-508)||(5800604-5800725)
chr3 (389-503)||(20853695-20853811)
chr3 (403-503)||(45003759-45003859)
chr3 (389-508)||(45969915-45970035)
chr3 (389-502)||(14262036-14262150)
chr3 (383-508)||(43572383-43572509)
chr3 (388-508)||(14161870-14161991)
chr3 (389-508)||(11003732-11003852)
chr3 (389-508)||(16721991-16722111)
chr3 (389-508)||(19113023-19113143)
chr3 (389-508)||(20853954-20854073)
chr3 (379-503)||(35740807-35740930)
chr3 (389-503)||(35995678-35995793)
chr3 (384-508)||(49986522-49986648)
chr3 (387-488)||(19720331-19720433)
chr3 (381-502)||(15328724-15328847)
chr3 (389-503)||(14171587-14171701)
chr3 (387-508)||(45003494-45003616)
chr3 (394-507)||(17649269-17649382)
chr3 (392-445)||(27946112-27946165)
chr3 (388-508)||(4204708-4204828)
chr3 (380-503)||(21633159-21633283)
chr3 (389-445)||(27946187-27946243)
chr3 (389-498)||(45970183-45970294)
chr3 (394-508)||(38283555-38283670)
chr3 (389-508)||(43572649-43572768)
chr3 (389-503)||(36990923-36991037)
chr3 (389-503)||(37016363-37016477)
chr3 (389-442)||(3425973-3426026)
chr3 (389-501)||(33372669-33372782)
chr3 (389-503)||(49986791-49986906)
chr3 (389-445)||(3424774-3424830)
chr3 (389-445)||(17465367-17465423)
chr3 (389-508)||(17465625-17465745)
chr3 (389-508)||(21632901-21633016)
chr3 (389-445)||(35741906-35741962)
chr3 (389-445)||(35995997-35996053)
chr3 (385-436)||(1067710-1067761)
chr3 (455-502)||(38283814-38283861)
chr3 (389-503)||(32998397-32998510)
chr3 (454-502)||(52552758-52552806)
chr3 (389-508)||(47575530-47575649)
[»] chr7 (43 HSPs)
chr7 (389-503)||(23704924-23705038)
chr7 (389-508)||(28218421-28218541)
chr7 (389-508)||(41600216-41600336)
chr7 (394-508)||(1250464-1250579)
chr7 (389-508)||(23704662-23704781)
chr7 (387-503)||(20419534-20419651)
chr7 (389-503)||(28218178-28218294)
chr7 (381-503)||(38879715-38879839)
chr7 (389-508)||(12006798-12006918)
chr7 (389-508)||(23383758-23383878)
chr7 (382-508)||(20419794-20419922)
chr7 (389-508)||(48672537-48672657)
chr7 (379-501)||(16995189-16995312)
chr7 (389-503)||(10409637-10409751)
chr7 (389-503)||(12006541-12006655)
chr7 (388-508)||(38879982-38880100)
chr7 (388-508)||(6465854-6465974)
chr7 (389-500)||(20963760-20963871)
chr7 (389-503)||(20458692-20458806)
chr7 (389-503)||(25772364-25772478)
chr7 (389-508)||(25772589-25772709)
chr7 (389-507)||(20458950-20459068)
chr7 (388-503)||(23383498-23383615)
chr7 (387-441)||(24195198-24195252)
chr7 (389-503)||(20963494-20963610)
chr7 (394-508)||(7658227-7658338)
chr7 (457-508)||(31851497-31851548)
chr7 (454-503)||(24195059-24195108)
chr7 (394-445)||(7657974-7658025)
chr7 (389-440)||(31852157-31852208)
chr7 (387-441)||(41599956-41600010)
chr7 (454-503)||(44816901-44816950)
chr7 (459-508)||(44817093-44817142)
chr7 (389-445)||(14630336-14630392)
chr7 (389-445)||(14646972-14647028)
chr7 (389-445)||(48672277-48672333)
chr7 (390-445)||(23258246-23258301)
chr7 (385-428)||(23274921-23274964)
chr7 (380-445)||(33131623-33131689)
chr7 (454-508)||(48648487-48648541)
chr7 (416-445)||(7842467-7842496)
chr7 (389-441)||(33162862-33162914)
chr7 (455-503)||(41600025-41600073)
[»] scaffold0449 (2 HSPs)
scaffold0449 (385-503)||(7222-7341)
scaffold0449 (389-508)||(7457-7578)
[»] scaffold0361 (2 HSPs)
scaffold0361 (389-503)||(4826-4940)
scaffold0361 (389-507)||(4562-4682)
[»] scaffold0117 (1 HSPs)
scaffold0117 (392-508)||(12240-12357)
[»] scaffold0809 (2 HSPs)
scaffold0809 (389-508)||(1411-1530)
scaffold0809 (389-443)||(1730-1784)
[»] scaffold0185 (1 HSPs)
scaffold0185 (389-508)||(3869-3989)
[»] scaffold0176 (1 HSPs)
scaffold0176 (389-508)||(15890-16006)
[»] scaffold0477 (2 HSPs)
scaffold0477 (401-503)||(5011-5113)
scaffold0477 (378-441)||(4869-4932)
[»] scaffold0141 (2 HSPs)
scaffold0141 (389-442)||(8325-8378)
scaffold0141 (454-503)||(8585-8634)
[»] scaffold0881 (1 HSPs)
scaffold0881 (454-503)||(286-335)
[»] scaffold0586 (1 HSPs)
scaffold0586 (388-428)||(5873-5913)
[»] scaffold0352 (2 HSPs)
scaffold0352 (389-445)||(6001-6057)
scaffold0352 (389-443)||(4667-4721)


Alignment Details
Target: chr2 (Bit Score: 76; Significance: 7e-35; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 19251471 - 19251590
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||||||||||||||||||||| |||||||||||||||||  |||||||||||||||        |||||||||||||||||| |||||| |||||||||    
T  19251471 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 19251570  T
Q  489 cacttttggtccctcctttc 508  Q
    ||||||||||||||||||||    
T  19251571 cacttttggtccctcctttc 19251590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 385 - 502
Target Start/End: Original strand, 22263188 - 22263305
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatatt 484  Q
    |||||||||||||| ||||||| ||| ||||||||||| ||||||||||||||||| || |        |||||||||||||||||| |||||| |||||    
T  22263188 ttttgggttaatacatcttttcatccctgtaatattagagaattctggttttagtctctatgaaaaaaagatttagattttgtccctgtaatttcatatt 22263287  T
Q  485 cttccacttttggtccct 502  Q
    ||||||||||||||||||    
T  22263288 cttccacttttggtccct 22263305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 385 - 497
Target Start/End: Original strand, 23854684 - 23854797
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatat 483  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||         |||||||||||||||||| |||||| ||||    
T  23854684 ttttgggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatat 23854783  T
Q  484 tcttccacttttgg 497  Q
    ||||||||||||||    
T  23854784 tcttccacttttgg 23854797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 26236127 - 26236247
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||         |||||| ||||||||||| |||||| | ||||||    
T  26236127 gggtaaatatctcttttcgtccttgtaatattagcgaattctggttttagtccctgtataaaaaaagatttatattttgtccctgtaatttcagattctt 26236226  T
Q  488 ccacttttggtccctcctttc 508  Q
     ||||||||||||||||||||    
T  26236227 tcacttttggtccctcctttc 26236247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 19251847 - 19251728
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||        |||||||||| ||||| | |||||| |||||||||    
T  19251847 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaagatttagattctgtccttgtaatttcatattcttc 19251748  T
Q  489 cacttttggtccctcctttc 508  Q
    |||||| |||||||| ||||    
T  19251747 cactttcggtccctcatttc 19251728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 503
Target Start/End: Original strand, 17850583 - 17850701
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatatt 484  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| | ||||||||||| |        ||||||||||||||| || |||||||| |||    
T  17850583 ttttgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctataaaaaaaagatttagattttgtctctgtaatttaagatt 17850682  T
Q  485 cttccacttttggtccctc 503  Q
    |||||||||||| ||||||    
T  17850683 cttccacttttgatccctc 17850701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 387 - 503
Target Start/End: Complemental strand, 23806332 - 23806215
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattc 485  Q
    |||||| |||||||||||| |||| |||||||||||||||||  |||||||||||||||         |||||||||||||||||| |||||| ||||||    
T  23806332 ttgggtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 23806233  T
Q  486 ttccacttttggtccctc 503  Q
    ||||||||||||||||||    
T  23806232 ttccacttttggtccctc 23806215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 385 - 508
Target Start/End: Original strand, 34548570 - 34548693
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatatt 484  Q
    |||||||| ||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||        |||||||||||||||| | |||||| |||||    
T  34548570 ttttgggtaaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaaagatttagattttgtccatgtaatttcatatt 34548669  T
Q  485 cttccacttttggtccctcctttc 508  Q
     |||||| ||||||| ||||||||    
T  34548670 gttccacctttggtcactcctttc 34548693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 22263571 - 22263449
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn---gatttagattttgtccctataatttaatattc 485  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||||||| ||||           |||| ||||||||||||| |||||| ||||||    
T  22263571 gggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaaagattcagattttgtccctgtaatttcatattc 22263472  T
Q  486 ttccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||||    
T  22263471 ttccacttttggtccctcctttc 22263449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 17463469 - 17463354
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| |||||||||||||| || |||||||||||||||||| |||||||||||||||         |||||||||||||||||| |||||  ||||||||    
T  17463469 gggtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattctt 17463370  T
Q  488 ccacttttggtccctc 503  Q
    ||||||||| ||||||    
T  17463369 ccacttttgatccctc 17463354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 26236472 - 26236358
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||| |||||||||||||||||  ||||||||||| ||         |||||||||||||||||| |||||| | |||||||    
T  26236472 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccttggaaaaaaaagatttagattttgtccctgtaatttcagattcttc 26236373  T
Q  489 cacttttggtccctc 503  Q
    || ||||||||||||    
T  26236372 catttttggtccctc 26236358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 400 - 508
Target Start/End: Original strand, 26135828 - 26135937
Alignment:
Q  400 tcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattcttccacttttggt 498  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||         |||||||||||||||||| |||||| | ||||||| |||||||||    
T  26135828 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggt 26135927  T
Q  499 ccctcctttc 508  Q
    ||||||||||    
T  26135928 ccctcctttc 26135937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 394 - 508
Target Start/End: Complemental strand, 26560928 - 26560812
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt--nnnnnnnngatttagattttgtccctataatttaatattcttccac 491  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||| ||           | ||||||||||||| |||||||| ||||||||||||    
T  26560928 aatacctcttttcgtccttgtaatattagcgaattccgattttagtcccggtaaaaaaaaaaaaattagattttgtccatataatttcatattcttccac 26560829  T
Q  492 ttttggtccctcctttc 508  Q
    |||||||| ||||||||    
T  26560828 ttttggtctctcctttc 26560812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 386 - 502
Target Start/End: Original strand, 42670714 - 42670833
Alignment:
Q  386 tttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt---nnnnnnnngatttagattttgtccctataatttaata 482  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||            | ||||||||||||| | |||||| |||    
T  42670714 tttgggttaatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgtaaaaaaaaaaaaaattagattttgtccttgtaatttcata 42670813  T
Q  483 ttcttccacttttggtccct 502  Q
    ||||||||||||||||||||    
T  42670814 ttcttccacttttggtccct 42670833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 17850964 - 17850844
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| |||||||||||||||||  |||||||||| ||||         | |||||||||||||||| |||||| | ||||||    
T  17850964 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagattctt 17850865  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||| ||||    
T  17850864 ccacttttggtccctcttttc 17850844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 503
Target Start/End: Complemental strand, 15106447 - 15106330
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatatt 484  Q
    |||||||| |||||||||||||||||  ||||||||||||||||  | |||||||||||||         ||||||||||||||||| |||||| | |||    
T  15106447 ttttgggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaa-atttagattttgtccctgtaatttcagatt 15106349  T
Q  485 cttccacttttggtccctc 503  Q
    |||||||||||| ||||||    
T  15106348 cttccacttttgatccctc 15106330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 507
Target Start/End: Original strand, 20498747 - 20498864
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||  |||||||||||||||||  |||||||||||||||         ||||||||| ||||||| | |||| | |||||||    
T  20498747 gggtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtccctgtaaaaaaaatatttagattatgtccctgt-atttcagattcttc 20498845  T
Q  489 cacttttggtccctccttt 507  Q
    |||||||||||||||||||    
T  20498846 cacttttggtccctccttt 20498864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 387 - 508
Target Start/End: Complemental strand, 42671099 - 42670977
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnng-atttagattttgtccctataatttaatattc 485  Q
    |||||| |||||||||||| |||| |||| ||||||||||||   ||||||||||||||        | ||||||||| ||||||| |||||| |||||     
T  42671099 ttgggtaaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattt 42671000  T
Q  486 ttccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||||    
T  42670999 ttccacttttggtccctcctttc 42670977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 502
Target Start/End: Complemental strand, 33290425 - 33290313
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||||| |||||||         | |||||||||| || | |||||| |||||||||    
T  33290425 gggttaataccgcttttggtccctgtaatattagcgaattctggttttaatccctgtaaaaaaaa-aattagattttgaccttgtaatttcatattcttc 33290327  T
Q  489 cacttttggtccct 502  Q
    ||||||||||||||    
T  33290326 cacttttggtccct 33290313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 15106067 - 15106187
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| |||| ||||||||||||  ||||||||||||||||  ||||||| |||||||         |||||||||||||||||| |||||| | ||| ||    
T  15106067 gggtaaatatctcttttcgtccccgtaatattagcgaatttcggttttaatccctgtaaataaaaagatttagattttgtccctgtaattttagattatt 15106166  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||    
T  15106167 ccacttttggtccctcctttc 15106187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 502
Target Start/End: Original strand, 26560556 - 26560668
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    ||||||||| |||||||||||| |||||||||| ||||||  | |||||||||||||        ||||||||||| |||||| |||||| | |||||||    
T  26560556 gggttaatatctcttttcgtccctgtaatattaacgaatttcgattttagtccctgt-aaaaaaagatttagatttagtccctgtaatttcagattcttc 26560654  T
Q  489 cacttttggtccct 502  Q
    ||||||||||||||    
T  26560655 cacttttggtccct 26560668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 503
Target Start/End: Original strand, 30390455 - 30390574
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngat-ttagattttgtccctataatttaatat 483  Q
    |||||||  |||| |||||||||||| |||||||||||||||||| | ||||| |||||||         |  ||||||||||||||| |||||| ||||    
T  30390455 ttttggggaaatatctcttttcgtccatgtaatattagcgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatat 30390554  T
Q  484 tcttccacttttggtccctc 503  Q
    ||||||||||||||||||||    
T  30390555 tcttccacttttggtccctc 30390574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 455 - 508
Target Start/End: Complemental strand, 23854977 - 23854924
Alignment:
Q  455 atttagattttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||||||    
T  23854977 atttagattttgtctctgtaattttatattcttccacttttggtccctcctttc 23854924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 13254497 - 13254617
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||| ||| | ||||||||||||||||| |||||||| |||||||         |||||||||||||||| | |||||| | ||||||    
T  13254497 gggtaaatacctctttccgttcctgtaatattagcgaattttggttttactccctgtaaaataaaagatttagattttgtccttgtaatttcagattctt 13254596  T
Q  488 ccacttttggtccctcctttc 508  Q
     |||||||||| |||||||||    
T  13254597 tcacttttggttcctcctttc 13254617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 388 - 500
Target Start/End: Original strand, 30958683 - 30958795
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||||||||||| ||||| |||| |||||||||||||||||  |||||||||||||||          |||||||||  ||||||| |||| | ||||||    
T  30958683 tgggttaataccacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagtttagatttcatccctatcatttgagattctt 30958782  T
Q  488 ccacttttggtcc 500  Q
    |||||||||||||    
T  30958783 ccacttttggtcc 30958795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 12419100 - 12419046
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccct 443  Q
    ||||||||||| ||||| |||| |||||||||||||||||| |||||||||||||    
T  12419100 gggttaataccacttttggtccctgtaatattagcgaattccggttttagtccct 12419046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 12431160 - 12431106
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccct 443  Q
    ||||||||||| ||||| |||| |||||||||||||||||| |||||||||||||    
T  12431160 gggttaataccacttttggtccctgtaatattagcgaattccggttttagtccct 12431106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 386 - 508
Target Start/End: Original strand, 17463089 - 17463211
Alignment:
Q  386 tttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattc 485  Q
    ||||||| ||||  ||||||||||| | |||||||||||||||| |||||||||| ||||         | ||||||||||||||| |||||| |  |||    
T  17463089 tttgggtaaatagttcttttcgtccctataatattagcgaattccggttttagtcgctgtaaaaaaaaaaattagattttgtccctgtaatttcaggttc 17463188  T
Q  486 ttccacttttggtccctcctttc 508  Q
    | |||||||||||||||| ||||    
T  17463189 tcccacttttggtccctcatttc 17463211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 389 - 495
Target Start/End: Complemental strand, 30960049 - 30959943
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    ||||||||||| ||||| |||| |||||||||||||||||| ||||||||||| |||          |||||||| ||||||| |||||| |||||| ||    
T  30960049 gggttaataccacttttggtccctgtaatattagcgaattccggttttagtccatgtaaaaaaaaagtttagattatgtccctgtaatttcatattcctc 30959950  T
Q  489 cactttt 495  Q
    |||||||    
T  30959949 cactttt 30959943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 436
Target Start/End: Complemental strand, 23855074 - 23855025
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggtttt 436  Q
    |||||| ||||||||||||||||| |||||||||||||||||| ||||||    
T  23855074 ttgggtaaatacctcttttcgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 441
Target Start/End: Complemental strand, 26136196 - 26136143
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtcc 441  Q
    ||||| |||||||||||||||||||||||||||| ||||||  |||||||||||    
T  26136196 tgggtaaatacctcttttcgtccttgtaatattaacgaatttcggttttagtcc 26136143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 39878103 - 39878158
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||| ||||||| |||| ||||||||||||||||||||||| |||||||||||||||    
T  39878103 gggtaaatacctttttt-gtccttgtaatattagcgaattccggttttagtccctgt 39878158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 13254809 - 13254758
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||| |||||||||||| |||||||||||||||||| |||||||||| ||||    
T  13254809 aatatctcttttcgtccctgtaatattagcgaattccggttttagtctctgt 13254758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 389 - 436
Target Start/End: Original strand, 23046707 - 23046754
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggtttt 436  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  23046707 gggtaaatacctcttttcgtccttgtaatatgagcgaattccggtttt 23046754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 13284793 - 13284735
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||||||||||  ||||| |||| |||||||||||||||||  |||||||||||||||    
T  13284793 ttgggttaatactgcttttggtccctgtaatattagcgaatttcggttttagtccctgt 13284735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 508
Target Start/End: Original strand, 23806022 - 23806072
Alignment:
Q  458 tagattttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    ||||||||| |||| |||||| | |||||||||||||||||||||||||||    
T  23806022 tagattttgcccctgtaattttagattcttccacttttggtccctcctttc 23806072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 44099002 - 44098944
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||||| |||| |||||||||||| |||||||| |||||||||||||||| || |||||    
T  44099002 ttgggtaaatatctcttttcgtccctgtaatatgagcgaattctggttttggttcctgt 44098944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 445
Target Start/End: Complemental strand, 39878459 - 39878395
Alignment:
Q  380 tttaattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||| |||||||| |||||||||||| ||||| |||||||||||||||||  ||||| ||||||||    
T  39878459 tttatttttgggtaaatacctctttttgtcct-gtaatattagcgaattccagttttcgtccctgt 39878395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 435
Target Start/End: Original strand, 44999363 - 44999398
Alignment:
Q  400 tcttttcgtccttgtaatattagcgaattctggttt 435  Q
    ||||||||||| ||||||||||||||||||||||||    
T  44999363 tcttttcgtccatgtaatattagcgaattctggttt 44999398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 441
Target Start/End: Complemental strand, 44999481 - 44999435
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtcc 441  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||    
T  44999481 aatacctcttttcgtcat-gtaatattagcgaattctgattttagtcc 44999435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 500
Target Start/End: Complemental strand, 20499057 - 20499011
Alignment:
Q  454 gatttagattttgtccctataatttaatattcttccacttttggtcc 500  Q
    |||||||||||||||||| |||||| | |||||| ||||||||||||    
T  20499057 gatttagattttgtccctgtaatttcagattctttcacttttggtcc 20499011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 33290043 - 33290105
Alignment:
Q  383 aattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||| ||||||||||   |||| |||| ||||||||||||||||||  ||||||||||||||    
T  33290043 aatttagggttaatactgtttttggtccctgtaatattagcgaattccagttttagtccctgt 33290105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 438
Target Start/End: Original strand, 13284412 - 13284461
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttag 438  Q
    ||||||||||| ||||| |||| |||||||| ||||||||| ||||||||    
T  13284412 gggttaataccactttttgtccctgtaatatcagcgaattccggttttag 13284461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 464 - 508
Target Start/End: Original strand, 13284484 - 13284528
Alignment:
Q  464 ttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    |||||||| |||||| |||||||||||||||| ||||||| ||||    
T  13284484 ttgtccctgtaatttcatattcttccacttttagtccctcatttc 13284528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 387 - 508
Target Start/End: Original strand, 14820293 - 14820414
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattct 486  Q
    |||||| ||||||||||||||||| |||||||||||||||||| ||||||||| |||||        |||||||||||||||||| |||||| |||||||    
T  14820293 ttgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatattct 14820392  T
Q  487 tccacttttggtccctcctttc 508  Q
    ||||||||||||||||||||||    
T  14820393 tccacttttggtccctcctttc 14820414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 10108370 - 10108490
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||         |||||||||||||||||| |||||| ||||||||    
T  10108370 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 10108469  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||    
T  10108470 ccacttttggtccctcctttc 10108490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 380 - 508
Target Start/End: Original strand, 5554859 - 5554989
Alignment:
Q  380 tttaatttt-gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatt 477  Q
    ||||||||| |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||         |||| |||||||||||||||||||    
T  5554859 tttaattttagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatt 5554958  T
Q  478 taatattcttccacttttggtccctcctttc 508  Q
    | ||||||||||||||||||||||| |||||    
T  5554959 tcatattcttccacttttggtcccttctttc 5554989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 388 - 503
Target Start/End: Original strand, 43851664 - 43851779
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||        |||||||||||||||||| |||||| | ||||||    
T  43851664 tgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaacaaaagatttagattttgtccctgtaatttcagattctt 43851763  T
Q  488 ccacttttggtccctc 503  Q
    ||||||||| ||||||    
T  43851764 ccacttttgatccctc 43851779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 389 - 502
Target Start/End: Complemental strand, 10108748 - 10108634
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||         |||||||||||||||||| |||||| ||||||||    
T  10108748 gggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 10108649  T
Q  488 ccacttttggtccct 502  Q
    |||||||||||||||    
T  10108648 ccacttttggtccct 10108634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 389 - 502
Target Start/End: Complemental strand, 14820672 - 14820558
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||         |||||||||||||||||| |||||| ||||||||    
T  14820672 gggttaatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 14820573  T
Q  488 ccacttttggtccct 502  Q
    |||||||||||||||    
T  14820572 ccacttttggtccct 14820558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 389 - 502
Target Start/End: Original strand, 21147936 - 21148051
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt--nnnnnnnngatttagattttgtccctataatttaatattct 486  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||          |||||||||||||||||| |||||| | |||||    
T  21147936 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 21148035  T
Q  487 tccacttttggtccct 502  Q
    ||||||||||||||||    
T  21148036 tccacttttggtccct 21148051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 397 - 508
Target Start/End: Original strand, 42112993 - 42113104
Alignment:
Q  397 acctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccacttttg 496  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||||        |||||||||| ||||||| |||||||| |||||| ||||||||    
T  42112993 acctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattatgtccctgtaatttaagattctttcacttttg 42113092  T
Q  497 gtccctcctttc 508  Q
    ||||||| ||||    
T  42113093 gtccctcatttc 42113104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 389 - 502
Target Start/End: Complemental strand, 5555247 - 5555133
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    ||||||| |||||||||||||| |||||||||||||||||  |||||||||| ||||         |||||||||||||||||| |||||| ||||||||    
T  5555247 gggttaacacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 5555148  T
Q  488 ccacttttggtccct 502  Q
    |||||||||||||||    
T  5555147 ccacttttggtccct 5555133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 394 - 508
Target Start/End: Complemental strand, 17623259 - 17623145
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccactt 493  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||| |||||        |||||||||||||||| | |||||| | ||||||||||||    
T  17623259 aatacctcttttcatccctgtaatattagccaattctggttttagtgcctgtaaaaaaaagatttagattttgtccttgtaatttcaaattcttccactt 17623160  T
Q  494 ttggtccctcctttc 508  Q
    |||||| ||||||||    
T  17623159 ttggtcactcctttc 17623145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 389 - 500
Target Start/End: Complemental strand, 30789885 - 30789773
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| |||||||||||  ||||| |||||||||||||||         |||||||||||||||||| |||||| | ||||||    
T  30789885 gggtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 30789786  T
Q  488 ccacttttggtcc 500  Q
    |||||||||||||    
T  30789785 ccacttttggtcc 30789773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 10171521 - 10171406
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| |||||| |||||||||| |||||||||||||||||| |||||||||||||||          ||||||||||||||||| |||||| | ||||||    
T  10171521 gggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagattctt 10171422  T
Q  488 ccacttttggtccctc 503  Q
     |||||||||||||||    
T  10171421 tcacttttggtccctc 10171406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 2583699 - 2583583
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt--nnnnnnnngatttagattttgtccctataatttaatattct 486  Q
    |||| |||| ||||||||||||| |||||||||||||||||| ||||||| ||||||          |||||| |||||||||||||||||| | |||||    
T  2583699 gggtaaatatctcttttcgtcctcgtaatattagcgaattctagttttaggccctgtaaaaaaaaaagatttaaattttgtccctataatttcagattct 2583600  T
Q  487 tccacttttggtccctc 503  Q
    |||||||||||| ||||    
T  2583599 tccacttttggttcctc 2583583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 17622890 - 17623002
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| |||||||||||||||||||||||||||||||||||   ||||||||||||||        ||||||||||||||  || |||||| | |||||||    
T  17622890 gggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttagtccctgt-aaaaaaagatttagattttgt-tctgtaattttagattcttc 17622987  T
Q  489 cacttttggtccctc 503  Q
    |||||||||||||||    
T  17622988 cacttttggtccctc 17623002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 502
Target Start/End: Original strand, 14767498 - 14767621
Alignment:
Q  381 ttaattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccc--tgtnnnnnnnngatttagattttgtccctataattt 478  Q
    ||||||| |||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  |          |||||||||||||||||| ||||||    
T  14767498 ttaatttagggttaatacctcttttcatctctgtaatattagcgaattttggttttagtcccaataaaaaaaaaagatttagattttgtccctgtaattt 14767597  T
Q  479 aatattcttccacttttggtccct 502  Q
     | ||| |||||||||||||||||    
T  14767598 cagatttttccacttttggtccct 14767621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 21148314 - 21148194
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||  ||||||||||| |||||| |||||||||||||||          | ||||||||||||| | |||||| ||||||||    
T  21148314 gggtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtccctgtaaaaaaaaaaaattagattttgtccttgtaatttcatattctt 21148215  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||| ||||||||||||    
T  21148214 ccacttttagtccctcctttc 21148194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 508
Target Start/End: Original strand, 30789519 - 30789627
Alignment:
Q  400 tcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccacttttggtc 499  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||        ||||||||||||||| || |||||| | |||| |||||||||| ||    
T  30789519 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtctctgtaatttcagattcctccacttttgatc 30789618  T
Q  500 cctcctttc 508  Q
    |||| ||||    
T  30789619 cctcatttc 30789627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 378 - 508
Target Start/End: Original strand, 7689513 - 7689643
Alignment:
Q  378 aatttaattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataat 476  Q
    |||||||||| |||| ||||||||||||||||| |||||||||||||||||  || |||||||| |||         |||||||| ||||||| | ||||    
T  7689513 aatttaatttagggtaaatacctcttttcgtccctgtaatattagcgaatttcggctttagtccttgtaaataaaaagatttaga-tttgtccttgtaat 7689611  T
Q  477 ttaatattcttccacttttggtccctcctttc 508  Q
    || | |||||||||||||||||||||| ||||    
T  7689612 ttcagattcttccacttttggtccctcttttc 7689643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 7689901 - 7689786
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| |||||||||||||||||| | ||||||||| |||         |||||| ||||||||||| |||||| | ||||||    
T  7689901 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccgtgtaaaaaaaaagatttaaattttgtccctgtaatttcagattctt 7689802  T
Q  488 ccacttttggtccctc 503  Q
    ||||||||| ||||||    
T  7689801 ccacttttgatccctc 7689786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 18044208 - 18044153
Alignment:
Q  386 tttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtcc 441  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||    
T  18044208 tttgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 18044153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 40487798 - 40487736
Alignment:
Q  383 aattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||||||  ||||||||||||||    
T  40487798 aatttagggttaataccacttttggtccttgtaatattagcgaattccagttttagtccctgt 40487736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 500
Target Start/End: Complemental strand, 42606131 - 42606019
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| |||| ||||||| |||| |||||||||||||||||||||||||||||  |||         |||||||||||||||||  |||||| | ||||||    
T  42606131 gggtaaatatctctttttgtccctgtaatattagcgaattctggttttagtcaatgtaaaaaaaaagatttagattttgtccccgtaatttcaaattctt 42606032  T
Q  488 ccacttttggtcc 500  Q
    |||||||||||||    
T  42606031 ccacttttggtcc 42606019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 20877123 - 20877069
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccct 443  Q
    ||||||||||||||||| |||| |||||||| ||||||||| |||||||||||||    
T  20877123 gggttaatacctcttttggtccctgtaatatgagcgaattccggttttagtccct 20877069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 457 - 507
Target Start/End: Original strand, 42605822 - 42605872
Alignment:
Q  457 ttagattttgtccctataatttaatattcttccacttttggtccctccttt 507  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  42605822 ttagattttatccctgtaatttcatattcttccacttttggtccctccttt 42605872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 503
Target Start/End: Complemental strand, 22494756 - 22494647
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccactt 493  Q
    ||||||||| ||||||| |||||||| || |||||||||||||||| ||           |||||||| ||||||||| |||||| | ||||||||||||    
T  22494756 aatacctctcttcgtccctgtaatatcagtgaattctggttttagttccgtaaaaaaagagatttagaatttgtccctgtaatttcaaattcttccactt 22494657  T
Q  494 ttggtccctc 503  Q
    ||||||||||    
T  22494656 ttggtccctc 22494647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 26136685 - 26136741
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||| ||||||||||||||| | ||||||||||||||||||  ||||||||||||||    
T  26136685 gggtgaatacctcttttcgttcctgtaatattagcgaattccagttttagtccctgt 26136741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 35367403 - 35367466
Alignment:
Q  382 taattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||||| |||| |||||||||||| |||| || ||||||||||||||| ||||||| |||||||    
T  35367403 taatttagggtaaatacctcttttggtccctgcaatattagcgaattccggttttaatccctgt 35367466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 42113359 - 42113242
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||| ||||||||||| |||||||||| ||||||  ||||||||| |||||         | ||||||| ||||||| |||||| | |||||||    
T  42113359 gggtaaatacatcttttcgtccctgtaatattaacgaatttcggttttagttcctgtaaaaaaa--aattagattatgtccctttaatttcaaattcttc 42113262  T
Q  489 cacttttggtccctcctttc 508  Q
    |||||||| |||||||||||    
T  42113261 cacttttgatccctcctttc 42113242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 26136994 - 26136948
Alignment:
Q  457 ttagattttgtccctataatttaatattcttccacttttggtccctc 503  Q
    ||||||||||||||| |||||| | ||||||||||||||||||||||    
T  26136994 ttagattttgtccctgtaatttcagattcttccacttttggtccctc 26136948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 499
Target Start/End: Complemental strand, 43481693 - 43481581
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt--nnnnnnnngatttagattttgtccctataatttaatattct 486  Q
    |||| |||| |||||||||||  |||||||||||||||||| |||||||||| ||||          |||||| ||||||||||| |||||| | |||||    
T  43481693 gggtaaatatctcttttcgtcactgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaattttgtccctgtaatttcaaattct 43481594  T
Q  487 tccacttttggtc 499  Q
    |||||| ||||||    
T  43481593 tccactcttggtc 43481581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 1949652 - 1949708
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||||||||||||||| |||| |||||||| | ||||||| ||||||||| |||||    
T  1949652 gggttaatacctcttttggtccctgtaatatgatcgaattccggttttagtgcctgt 1949708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 28977686 - 28977734
Alignment:
Q  455 atttagattttgtccctataatttaatattcttccacttttggtccctc 503  Q
    ||||||||| ||||||||| |||| ||||| ||||||||||||||||||    
T  28977686 atttagattctgtccctatcatttcatatttttccacttttggtccctc 28977734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 508
Target Start/End: Original strand, 2583317 - 2583440
Alignment:
Q  386 tttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatatt 484  Q
    ||||||| ||||||||||||| | | |||||||||||||||||  | ||||||| | |||         |||||||||||||||||| ||||||   |||    
T  2583317 tttgggtaaatacctcttttcattcctgtaatattagcgaatttcgattttagttcttgtaaaataaaagatttagattttgtccctgtaatttcggatt 2583416  T
Q  485 cttccacttttggtccctcctttc 508  Q
    |||| ||||||| |||||||||||    
T  2583417 cttctacttttgatccctcctttc 2583440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 436
Target Start/End: Original strand, 44162659 - 44162710
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggtttt 436  Q
    |||||| ||||||||| ||||  ||| |||||||||||||||||||||||||    
T  44162659 ttttggattaataccttttttgatccctgtaatattagcgaattctggtttt 44162710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 8106130 - 8106076
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccct 443  Q
    ||||||||||||||||| ||| ||| ||||| |||||||||  ||||||||||||    
T  8106130 gggttaatacctcttttggtcattgcaatatgagcgaattccagttttagtccct 8106076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 20875698 - 20875811
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    ||||||||||||||||| |||| |||||||| ||| ||||  ||||||||||| |||        | ||| |||| ||||||||| |||| | |||||||    
T  20875698 gggttaatacctcttttggtccctgtaatatgagcaaatttcggttttagtccttgtaaaaaaaag-tttggattatgtccctattatttcagattcttc 20875796  T
Q  489 cacttttggtccctc 503  Q
    ||||||| |||||||    
T  20875797 cacttttagtccctc 20875811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 503
Target Start/End: Original strand, 26532849 - 26532898
Alignment:
Q  454 gatttagattttgtccctataatttaatattcttccacttttggtccctc 503  Q
    |||||||||||||||||| |||||| | ||| ||||||||||| ||||||    
T  26532849 gatttagattttgtccctgtaatttcaaatttttccacttttgatccctc 26532898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 445
Target Start/End: Original strand, 39888477 - 39888537
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||| |||||||||||||||| |||| | |||||| |||||| |  |||||||||||||||    
T  39888477 tttttggttaatacctcttttggtccctataatataagcgaaattcggttttagtccctgt 39888537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 32017881 - 32017762
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| |||| |||||||||||| |||||||||||||||||| |||||||||||||||        |||||||||||||||||| |||||| |||||||||    
T  32017881 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 32017782  T
Q  489 cacttttggtccctcctttc 508  Q
    ||||||||||||||||||||    
T  32017781 cacttttggtccctcctttc 32017762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 18500315 - 18500429
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||| | |||||||||||||||  |||||||||||||||        |||||||||||||||||| |||||| |||||||||    
T  18500315 gggtaaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgtaagaaaaagatttagattttgtccctgtaatttcatattcttc 18500414  T
Q  489 cacttttggtccctc 503  Q
    |||||||||||||||    
T  18500415 cacttttggtccctc 18500429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 388 - 508
Target Start/End: Original strand, 9481181 - 9481302
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattct 486  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||         |||||||||| ||||||| |||||| |||||||    
T  9481181 tgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattct 9481280  T
Q  487 tccacttttggtccctcctttc 508  Q
    |||| |||||||||||||||||    
T  9481281 tccaattttggtccctcctttc 9481302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 388 - 503
Target Start/End: Original strand, 26385277 - 26385393
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattct 486  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||||||| |||         |||||||||||||||||| |||||| |||||||    
T  26385277 tgggtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgtagaaaaaaagatttagattttgtccctgtaattttatattct 26385376  T
Q  487 tccacttttggtccctc 503  Q
    |||||||||||||||||    
T  26385377 tccacttttggtccctc 26385393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 394 - 508
Target Start/End: Original strand, 19284134 - 19284249
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattcttccact 492  Q
    ||||||||||||||| | ||||||||||||||||||  ||||||||||  ||         |||||||||||||||||| |||||| | |||||||||||    
T  19284134 aatacctcttttcgttcatgtaatattagcgaattccagttttagtccacgtaaaataaaagatttagattttgtccctgtaatttcagattcttccact 19284233  T
Q  493 tttggtccctcctttc 508  Q
    ||||||||||||||||    
T  19284234 tttggtccctcctttc 19284249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 394 - 508
Target Start/End: Complemental strand, 26385647 - 26385532
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattcttccact 492  Q
    ||||||||||||||||| |||||||||||||||||| | |||||||||||||         ||||||||| |||| |||  ||||| |||||||||||||    
T  26385647 aatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaacaaagatttagatgttgttcctgcaatttcatattcttccact 26385548  T
Q  493 tttggtccctcctttc 508  Q
    ||||||| ||||||||    
T  26385547 tttggtctctcctttc 26385532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 389 - 507
Target Start/End: Original strand, 30617967 - 30618081
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||| ||||||||||| |||||||| ||||||||| |           ||||||||||||||||| |||||| ||||| |||    
T  30617967 gggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtcctt----taaaaaaatttagattttgtccctgtaatttcatattgttc 30618062  T
Q  489 cacttttggtccctccttt 507  Q
    |||||||||||||||||||    
T  30618063 cacttttggtccctccttt 30618081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 24731935 - 24732058
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt----nnnnnnnngatttagattttgtccctataatttaatatt 484  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||             | ||||||||||||||| |||||| | |||    
T  24731935 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaaaaattagattttgtccctgtaatttcagatt 24732034  T
Q  485 cttccacttttggtccctcctttc 508  Q
    |||| |||||||||||||||||||    
T  24732035 cttctacttttggtccctcctttc 24732058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 24732315 - 24732201
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| ||||||||||||||||||   ||| |||||||||         |||||||||||||||| | |||||| ||||||||    
T  24732315 gggtaaatacctcttttcgtccctgtaatattagcgaattccaattt-agtccctgtaaaaaaaaagatttagattttgtccatgtaatttcatattctt 24732217  T
Q  488 ccacttttggtccctc 503  Q
    ||||||||||||||||    
T  24732216 ccacttttggtccctc 24732201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 9854263 - 9854145
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnnga-tttagattttgtccctataatttaatattctt 487  Q
    ||||||||||  ||||| |||| |||||||||||||||||||||||||||||  |||         | |||||||||||||| | |||||| ||||||||    
T  9854263 gggttaatactgctttttgtccctgtaatattagcgaattctggttttagtc--tgtaaaaataataatttagattttgtccttgtaatttcatattctt 9854166  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||| ||||    
T  9854165 ccacttttggtccctcatttc 9854145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 503
Target Start/End: Original strand, 33714494 - 33714602
Alignment:
Q  400 tcttttcgtccttgtaatattagcgaattctggtttta--gtccctgtnnnnnnnn---gatttagattttgtccctataatttaatattcttccacttt 494  Q
    ||||||||||| |||||||||||||||||| |||||||  ||||||||           |||||||||||||||| | |||||| |||||||||||||||    
T  33714494 tcttttcgtccctgtaatattagcgaattccggttttatagtccctgtaaaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttt 33714593  T
Q  495 tggtccctc 503  Q
    |||||||||    
T  33714594 tggtccctc 33714602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 394 - 444
Target Start/End: Original strand, 10321738 - 10321788
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctg 444  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  10321738 aatacttcttttcgtccctgtaatattagcgaattccggttttagtccctg 10321788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 499
Target Start/End: Complemental strand, 3230217 - 3230129
Alignment:
Q  412 tgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattcttccacttttggtc 499  Q
    |||||||||||||||||| | |||||||||||||         |||||||||||||||| |||||||| |||||||| |||||||||||    
T  3230217 tgtaatattagcgaattccgattttagtccctgtaaaataaaagatttagattttgtccatataatttcatattctttcacttttggtc 3230129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 498
Target Start/End: Original strand, 9154882 - 9154990
Alignment:
Q  392 ttaatacctcttttcgtccttgtaata-ttagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattcttcc 489  Q
    ||||||||||||||| ||| ||||||| ||||||||||| | |||||||||||||         |||||||||||||||||| |||||| | ||||||||    
T  9154882 ttaatacctcttttcctccctgtaatatttagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcc 9154981  T
Q  490 acttttggt 498  Q
    | |||||||    
T  9154982 agttttggt 9154990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 441
Target Start/End: Complemental strand, 18500707 - 18500655
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtcc 441  Q
    |||| ||||||||||||||||| |||||||||||||||||  |||||||||||    
T  18500707 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 445
Target Start/End: Original strand, 21069510 - 21069570
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||||||||||||||  |||| |||| |||||||| ||||||||| |||||||||||||||    
T  21069510 ttttgggttaatacccattttagtccctgtaatatgagcgaattccggttttagtccctgt 21069570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 508
Target Start/End: Original strand, 33637625 - 33637679
Alignment:
Q  454 gatttagattttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    |||||||||||||| | | |||||| | |||||||||||||||||||||||||||    
T  33637625 gatttagattttgttcttgtaattttagattcttccacttttggtccctcctttc 33637679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 384 - 445
Target Start/End: Original strand, 34884552 - 34884613
Alignment:
Q  384 attttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||| ||| |||| |||||||||||||||||||||||| |||||  ||||||| |||||||    
T  34884552 attttaggtaaatatctcttttcgtccttgtaatattagtgaatttcggttttaatccctgt 34884613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 2299691 - 2299635
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||| |||| |||||||||| | |||||||||||||||||| ||||||||| |||||    
T  2299691 gggtaaatatctcttttcgttcctgtaatattagcgaattccggttttagttcctgt 2299635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 502
Target Start/End: Complemental strand, 9481494 - 9481446
Alignment:
Q  454 gatttagattttgtccctataatttaatattcttccacttttggtccct 502  Q
    |||||||||||||||| | |||||| | |||||||||||||||||||||    
T  9481494 gatttagattttgtccttgtaatttcagattcttccacttttggtccct 9481446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 445
Target Start/End: Original strand, 2299353 - 2299396
Alignment:
Q  402 ttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||||||  |||||||||||||||||| |||||||||||||||    
T  2299353 ttttcgtctatgtaatattagcgaattccggttttagtccctgt 2299396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 508
Target Start/End: Complemental strand, 2299617 - 2299567
Alignment:
Q  458 tagattttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    |||||||||||||| |||||| | ||||||||||||||  |||||||||||    
T  2299617 tagattttgtccctgtaatttcagattcttccactttttatccctcctttc 2299567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 500
Target Start/End: Original strand, 14680949 - 14680994
Alignment:
Q  455 atttagattttgtccctataatttaatattcttccacttttggtcc 500  Q
    ||||||||||||||  | |||||| |||||||||||||||||||||    
T  14680949 atttagattttgtctttgtaatttcatattcttccacttttggtcc 14680994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 508
Target Start/End: Original strand, 17142744 - 17142797
Alignment:
Q  455 atttagattttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    ||||||||| ||||||| |||||| | |||||||||||||||||| ||| ||||    
T  17142744 atttagattatgtccctgtaatttcaaattcttccacttttggtctctcgtttc 17142797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 33637901 - 33637844
Alignment:
Q  383 aattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtc 440  Q
    ||||| |||| ||||||||||||| || ||||||||||| ||||||  ||||||||||    
T  33637901 aatttagggtaaatacctcttttcatctttgtaatattaccgaatttcggttttagtc 33637844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 21070915 - 21070859
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||||||||| ||||| |||| |||||||| ||||||||| ||| |||||| ||||    
T  21070915 gggttaataccccttttagtccctgtaatatgagcgaattccggtattagtctctgt 21070859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 495
Target Start/End: Complemental strand, 30618272 - 30618232
Alignment:
Q  455 atttagattttgtccctataatttaatattcttccactttt 495  Q
    ||||||||||||||||| |||||| | ||||||||||||||    
T  30618272 atttagattttgtccctgtaattttagattcttccactttt 30618232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 385 - 508
Target Start/End: Original strand, 15640712 - 15640835
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatatt 484  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| ||||||||| |||||        |||||||||||||||||| |||||| |||||    
T  15640712 ttttgggttaacacctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatatt 15640811  T
Q  485 cttccacttttggtccctcctttc 508  Q
    ||| ||||||||||||||||||||    
T  15640812 ctttcacttttggtccctcctttc 15640835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 394 - 508
Target Start/End: Complemental strand, 38574341 - 38574226
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattcttccact 492  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||||| |||||| |||||||||||||    
T  38574341 aataccttttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttccact 38574242  T
Q  493 tttggtccctcctttc 508  Q
    ||||||||||||||||    
T  38574241 tttggtccctcctttc 38574226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 37013084 - 37012965
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||         | ||||||||||||||| |||||| |||||||||    
T  37013084 gggtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgtataaaaaaaaattagattttgtccctgtaatttcatattcttc 37012985  T
Q  489 cacttttggtccctcctttc 508  Q
    ||||||||||| ||||||||    
T  37012984 cacttttggtcactcctttc 37012965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 394 - 508
Target Start/End: Original strand, 35376168 - 35376282
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccactt 493  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||        ||||||||||||||| || |||||| | ||||||||||||    
T  35376168 aatacctattttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaagatttagattttgtctctgtaattttagattcttccactt 35376267  T
Q  494 ttggtccctcctttc 508  Q
    |||||| ||||||||    
T  35376268 ttggtctctcctttc 35376282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 394 - 508
Target Start/End: Original strand, 3018016 - 3018132
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn--gatttagattttgtccctataatttaatattcttccac 491  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||          |||||||||||||||||| |||||| ||||||||||||    
T  3018016 aatacctcttttcgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttccac 3018115  T
Q  492 ttttggtccctcctttc 508  Q
    |||||||||||||||||    
T  3018116 ttttggtccctcctttc 3018132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 394 - 508
Target Start/End: Original strand, 9618985 - 9619100
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattcttccact 492  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||||||||||         |||||||||||||||||| |||||| | |||||||||||    
T  9618985 aatacctattttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattcttccact 9619084  T
Q  493 tttggtccctcctttc 508  Q
    ||||||||||||||||    
T  9619085 tttggtccctcctttc 9619100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 38573969 - 38574083
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||| ||||||||||| |||||| | ||||| |||||||        |||||||||||||||||| |||||| |||||||||    
T  38573969 gggtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 38574068  T
Q  489 cacttttggtccctc 503  Q
    |||||||||||||||    
T  38574069 cacttttggtccctc 38574083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 389 - 500
Target Start/End: Complemental strand, 9619357 - 9619245
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||         |||||||||||||||| | |||||| ||||||||    
T  9619357 gggtaaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgtagaaaaaaagatttagattttgtccttgtaatttcatattctt 9619258  T
Q  488 ccacttttggtcc 500  Q
    |||||||||||||    
T  9619257 ccacttttggtcc 9619245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 379 - 508
Target Start/End: Original strand, 31943940 - 31944070
Alignment:
Q  379 atttaattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn--gatttagattttgtccctataat 476  Q
    ||||||||| |||| ||||| ||||||||||| |||||||||||||||||| ||||||||| |||||          |||||||||||||||||| ||||    
T  31943940 atttaatttagggtaaatac-tcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaat 31944038  T
Q  477 ttaatattcttccacttttggtccctcctttc 508  Q
    || |||||||||||||||||||| ||||||||    
T  31944039 ttcatattcttccacttttggtctctcctttc 31944070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 389 - 497
Target Start/End: Complemental strand, 9397076 - 9396968
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||| ||||||||||| |||||||||||| ||||| |||||||||||||||        |||||||||||||||||| |||||| | |||||||    
T  9397076 gggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttc 9396977  T
Q  489 cacttttgg 497  Q
    |||||||||    
T  9396976 cacttttgg 9396968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 391 - 502
Target Start/End: Original strand, 37012709 - 37012821
Alignment:
Q  391 gttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattcttcc 489  Q
    ||||||||||||||||||||||||||||||||||||||||  ||| ||||| |||         |||||||||||||||||| |||||| | ||||||||    
T  37012709 gttaatacctcttttcgtccttgtaatattagcgaattctaatttcagtccttgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcc 37012808  T
Q  490 acttttggtccct 502  Q
    |||||||||||||    
T  37012809 acttttggtccct 37012821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 46046801 - 46046682
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||| ||||||||| |||||||||||||||||| |||||||||||||||         |||||||||||||||||| |||||| | ||||||    
T  46046801 gggtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 46046703  T
Q  488 ccacttttggtccctcctttc 508  Q
    ||||||||| |||||||||||    
T  46046702 ccacttttgatccctcctttc 46046682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 394 - 508
Target Start/End: Original strand, 9396704 - 9396819
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattcttccact 492  Q
    ||||||||||||||||| |||||||||||||||||  | |||||||| ||||         ||||||||||||||||||||||||| | ||| |||||||    
T  9396704 aatacctcttttcgtccctgtaatattagcgaatttcgattttagtctctgttaaaaaaaagatttagattttgtccctataatttcaaatttttccact 9396803  T
Q  493 tttggtccctcctttc 508  Q
    ||||||||||||||||    
T  9396804 tttggtccctcctttc 9396819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 503
Target Start/End: Original strand, 9516606 - 9516725
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatat 483  Q
    |||| ||| |||| |||||||||||| |||||||||||||||||| ||||||||||| |||         |||||||||||||||| | |||||| ||||    
T  9516606 ttttaggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatat 9516705  T
Q  484 tcttccacttttggtccctc 503  Q
    ||||||||||||||||||||    
T  9516706 tcttccacttttggtccctc 9516725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 387 - 508
Target Start/End: Complemental strand, 9516990 - 9516868
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattc 485  Q
    |||||| |||| |||||||||||| |||||||||||||||||  |||||||||| ||||         |||||||||||||||||| |||||| | ||||    
T  9516990 ttgggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcagattc 9516891  T
Q  486 ttccacttttggtccctcctttc 508  Q
    ||| |||||||||||||||||||    
T  9516890 ttctacttttggtccctcctttc 9516868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 389 - 499
Target Start/End: Original strand, 12904747 - 12904857
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| |||| |||||||||||| | ||||||||||||||| ||||||||||||||||         ||||||||||||||| |||||||| | |||||||    
T  12904747 gggtaaatatctcttttcgtccctataatattagcgaattttggttttagtccctgtaaaaaaaaaatttagattttgtccttataatttcagattcttc 12904846  T
Q  489 cacttttggtc 499  Q
    |||||||||||    
T  12904847 cacttttggtc 12904857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 388 - 501
Target Start/End: Complemental strand, 26252616 - 26252502
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattct 486  Q
    ||||| |||| |||||||||||| ||||||||||||||||||  |||||||| |||||         |||||||||||||||||| |||||| |||||||    
T  26252616 tgggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 26252517  T
Q  487 tccacttttggtccc 501  Q
    |||||||||||||||    
T  26252516 tccacttttggtccc 26252502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 394 - 503
Target Start/End: Original strand, 34063987 - 34064097
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattcttccact 492  Q
    ||||||||||||||||| |||||||||| |||||||| ||||||||||||||         ||||||||||||||| || |||||| | |||||||||||    
T  34063987 aatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattcttccact 34064086  T
Q  493 tttggtccctc 503  Q
    |||||||||||    
T  34064087 tttggtccctc 34064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 392 - 508
Target Start/End: Complemental strand, 48580241 - 48580124
Alignment:
Q  392 ttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattcttcca 490  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||| |||   |         |||||||||||||||||| |||||| ||||| |||||    
T  48580241 ttaatacctcttttcgtccctgtaatattagcgaattccggttttaatcctgataaaaaaaacgatttagattttgtccctgtaatttcatattgttcca 48580142  T
Q  491 cttttggtccctcctttc 508  Q
    ||||||||||||||||||    
T  48580141 cttttggtccctcctttc 48580124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 385 - 508
Target Start/End: Complemental strand, 3274000 - 3273878
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatatt 484  Q
    |||||||| |||||||||||||||||  ||||||||||||||||  ||||||||||||| |        |||||||||||| ||||| |||||| | |||    
T  3274000 ttttgggtaaatacctcttttcgtccc-gtaatattagcgaatttcggttttagtccctataaaaaaaagatttagattttatccctgtaatttcagatt 3273902  T
Q  485 cttccacttttggtccctcctttc 508  Q
    |||||||||||| |||||| ||||    
T  3273901 cttccacttttgatccctcatttc 3273878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 13132317 - 13132199
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||| ||||||||| |||||||||||||||||  | ||||||||| |||        |||||||||| ||||||| |||||| |||||||||    
T  13132317 gggtaaatacctattttcgtccctgtaatattagcgaatttcgattttagtcc-tgtaaaaaaaagatttagattctgtccctgtaatttcatattcttc 13132219  T
Q  489 cacttttggtccctcctttc 508  Q
    |||||||||||||| |||||    
T  13132218 cacttttggtcccttctttc 13132199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 3273621 - 3273742
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngattta--gattttgtccctataatttaatattct 486  Q
    |||| |||| |||||||||||| |||||||||||||||||| | |||||||||| ||          ||||  |||||||||||| |||||| |||||||    
T  3273621 gggtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtccccgtaatttttttttttatagattttgtccctgtaatttcatattct 3273720  T
Q  487 tccacttttggtccctcctttc 508  Q
    ||||||||||||||||||||||    
T  3273721 tccacttttggtccctcctttc 3273742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 394 - 503
Target Start/End: Complemental strand, 35376500 - 35376391
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccactt 493  Q
    |||| |||||||||||| |||||||||||| |||||  ||||||||||||||        |||||| ||||||||||| |||||| | | ||||||||||    
T  35376500 aatatctcttttcgtccctgtaatattagcaaattccagttttagtccctgtaaaaaaaagatttaaattttgtccctgtaatttcagaatcttccactt 35376401  T
Q  494 ttggtccctc 503  Q
    ||||||||||    
T  35376400 ttggtccctc 35376391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 374 - 503
Target Start/End: Original strand, 46046415 - 46046539
Alignment:
Q  374 ttaaaatttaattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctat 473  Q
    |||||||| ||| | |||| ||||||| ||||||||| |||||||||||||||||| | |||||||||||||         |  |||||||||||||| |    
T  46046415 ttaaaattaaatatagggtaaataccttttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaa-----aaatagattttgtccctgt 46046509  T
Q  474 aatttaatattcttccacttttggtccctc 503  Q
    ||||| ||||||||||||||||| ||||||    
T  46046510 aatttcatattcttccacttttgatccctc 46046539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 31218359 - 31218303
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  31218359 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 31218303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 36887680 - 36887736
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||    
T  36887680 gggttaatacctcttttggtccctgtaatattagcgaattttggttttagtccctgt 36887736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 43313593 - 43313533
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||||||||||||| ||||| |||  ||||||||||||||||||||||||||||||||||    
T  43313593 ttttgggttaataccacttttggtctctgtaatattagcgaattctggttttagtccctgt 43313533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 387 - 503
Target Start/End: Original strand, 31090058 - 31090176
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn--gatttagattttgtccctataatttaatatt 484  Q
    |||||| ||||| |||||| |||| ||||||||||| |||||  | |||||||||||||          |||||||||||||||||| |||||| |||||    
T  31090058 ttgggtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatatt 31090157  T
Q  485 cttccacttttggtccctc 503  Q
    |||||||||||||||||||    
T  31090158 cttccacttttggtccctc 31090176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 496
Target Start/End: Complemental strand, 48260132 - 48260021
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatatt 484  Q
    ||||| || |||| |||||||||||| ||||||||||||||||| || ||||| || ||||        |||||||||||||||||| |||||| | |||    
T  48260132 ttttgagtaaatatctcttttcgtccctgtaatattagcgaattttgattttaatctctgtaaaaaaaagatttagattttgtccctgtaatttcaaatt 48260033  T
Q  485 cttccacttttg 496  Q
    ||||||||||||    
T  48260032 cttccacttttg 48260021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 502
Target Start/End: Complemental strand, 3018388 - 3018276
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    ||||||||| |||||||||||| |||||||||| ||||||  |||||||||||||||        |||||||| ||||||| | |||||| | ||||| |    
T  3018388 gggttaatatctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaagatttaga-tttgtccgtgtaatttcagattctac 3018290  T
Q  489 cacttttggtccct 502  Q
    ||||||||||||||    
T  3018289 cacttttggtccct 3018276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 508
Target Start/End: Complemental strand, 15641089 - 15640973
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt--nnnnnnnngatttagattttgtccctataatttaatattcttccac 491  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| | |||||          |||||||||| ||||||| |||||| | ||||||||||    
T  15641089 aatacctcttttcgtccttgtaatattagtgaattccggttttaattcctgtaaaaaaaaaagatttagattatgtccctgtaatttcagattcttccac 15640990  T
Q  492 ttttggtccctcctttc 508  Q
    ||||||| |||| ||||    
T  15640989 ttttggttcctcatttc 15640973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 31090439 - 31090319
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngat-ttagattttgtccctataatttaatattctt 487  Q
    |||| |||| |||||||||||| |||||||||||||||||  | |||||||||||||         |  ||||||||||||||| |||||| | ||||||    
T  31090439 gggtaaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccctgtaaaaaaaaaaaattagattttgtccctgtaatttcagattctt 31090340  T
Q  488 ccacttttggtccctcctttc 508  Q
    | |||||||||||||||||||    
T  31090339 ctacttttggtccctcctttc 31090319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 384 - 508
Target Start/End: Complemental strand, 41947237 - 41947114
Alignment:
Q  384 attttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatat 483  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||  ||||||||| ||| |         | ||||||||||||| | |||||| ||||    
T  41947237 attttgggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagt-ccttttaaaaaaaaaattagattttgtccttgtaatttcatat 41947139  T
Q  484 tcttccacttttggtccctcctttc 508  Q
    | ||||||||||||||||| |||||    
T  41947138 ttttccacttttggtccctgctttc 41947114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 508
Target Start/End: Original strand, 7819020 - 7819134
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattcttccact 492  Q
    |||||||||||||| || | |||||||||||||||| ||||||||||  |||         |||||||||||||||||| |||||| | |||||||||||    
T  7819020 aatacctcttttcgaccatataatattagcgaattccggttttagtca-tgtaaataaaaagatttagattttgtccctgtaatttcagattcttccact 7819118  T
Q  493 tttggtccctcctttc 508  Q
    |||||| |||||||||    
T  7819119 tttggttcctcctttc 7819134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 457 - 508
Target Start/End: Original strand, 26252337 - 26252388
Alignment:
Q  457 ttagattttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    ||||||||||||||| |||||| | |||||||||||||||||||||||||||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttc 26252388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 31944328 - 31944213
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||| |||||||||||||||||||||||||||||  |||||||||| ||||          | ||||||||||||| | |||||| ||||||||    
T  31944328 gggtaaatacttcttttcgtccttgtaatattagcgaatttcggttttagtctctgtaaaaaaaaataattagattttgtccatgtaatttcatattctt 31944229  T
Q  488 ccacttttggtccctc 503  Q
    |||||||| |||||||    
T  31944228 ccactttttgtccctc 31944213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 41946965 - 41947020
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctg 444  Q
    |||| ||||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  41946965 gggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctg 41947020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 394 - 508
Target Start/End: Original strand, 4355887 - 4356001
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccactt 493  Q
    |||||||||||| || | | |||||||||||||||| ||||||||| |||||        | |||||||||||||  | |||||| |||||||| |||||    
T  4355887 aatacctctttttgttcatataatattagcgaattccggttttagttcctgtaaaaacaagctttagattttgtctatgtaatttcatattctttcactt 4355986  T
Q  494 ttggtccctcctttc 508  Q
    |||||||||| ||||    
T  4355987 ttggtccctcatttc 4356001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 454 - 508
Target Start/End: Original strand, 18713026 - 18713080
Alignment:
Q  454 gatttagattttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    |||||||||||||||||| |||||| ||||| ||||| |||||||||||||||||    
T  18713026 gatttagattttgtccctgtaatttcatattgttccaattttggtccctcctttc 18713080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 429
Target Start/End: Complemental strand, 18667668 - 18667628
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattc 429  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  18667668 gggttaatacctcttttcgtccctgtaatattagcgaattc 18667628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 48259823 - 48259879
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||| |||| |||||||||||| |||||||||||||||||| ||||||| |||||||    
T  48259823 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttaatccctgt 48259879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 13131945 - 13131996
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||||||||||||||||||||||||||| ||||||   ||||||||||||||    
T  13131945 aatacctcttttcgtccttgtaatattaacgaatttctgttttagtccctgt 13131996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 502
Target Start/End: Complemental strand, 4356255 - 4356145
Alignment:
Q  392 ttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccac 491  Q
    ||||||||||||||| ||| |||||||||||||||||  ||||||| || ||||         | || ||||||||| || |||||| | ||||||||||    
T  4356255 ttaatacctcttttcatccctgtaatattagcgaatttcggttttaatctctgtaataaaaaaaatttgattttgtctctgtaatttcaaattcttccac 4356156  T
Q  492 ttttggtccct 502  Q
    |||||||||||    
T  4356155 ttttggtccct 4356145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 502
Target Start/End: Complemental strand, 18713340 - 18713224
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtc---cctgtnnnnnnnngatttagattttgtccctataatttaatattc 485  Q
    |||||||||||||||||||| | |||| ||||||||| ||  ||||||||||   |||||        ||||||||||||||| || |||||| | ||||    
T  18713340 gggttaatacctcttttcgtacctgtattattagcgagtttcggttttagtcgtccctgtaaaaaaaagatttagattttgtctctgtaatttcagattc 18713241  T
Q  486 ttccacttttggtccct 502  Q
    ||||| |||||||||||    
T  18713240 ttccagttttggtccct 18713224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 31083408 - 31083362
Alignment:
Q  455 atttagattttgtccctataatttaatattcttccacttttggtccc 501  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||    
T  31083408 atttagattttgtccctatcatttgagattcttccacttttggtccc 31083362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 508
Target Start/End: Complemental strand, 34064294 - 34064240
Alignment:
Q  454 gatttagattttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    ||||||||||||||| || |||||| | ||||||||||||||||||||| |||||    
T  34064294 gatttagattttgtctctgtaatttcagattcttccacttttggtcccttctttc 34064240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 36889056 - 36888943
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    ||||||||||| ||||| |||| | ||||||||||||||| |||||||||| |||||         ||||||||| ||||||| |||||| | |||| ||    
T  36889056 gggttaataccacttttggtccctataatattagcgaattttggttttagt-cctgtaaaaaaaaaatttagattatgtccctgtaatttcagattcctc 36888958  T
Q  489 cacttttggtccctc 503  Q
    ||||||| |||||||    
T  36888957 cacttttagtccctc 36888943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 429
Target Start/End: Complemental strand, 50462774 - 50462734
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattc 429  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  50462774 gggttaatacctcttttggtccctgtaatattagcgaattc 50462734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 53896446 - 53896502
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||||||||||||||||  ||  |||||||| ||||||||| |||||||||||||||    
T  53896446 gggttaatacctcttttgatcgctgtaatatgagcgaattccggttttagtccctgt 53896502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 20068518 - 20068564
Alignment:
Q  457 ttagattttgtccctataatttaatattcttccacttttggtccctc 503  Q
    ||||||||||||||||| ||||   ||||||||||||||||||||||    
T  20068518 ttagattttgtccctatcatttgtgattcttccacttttggtccctc 20068564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 503
Target Start/End: Complemental strand, 7819322 - 7819277
Alignment:
Q  458 tagattttgtccctataatttaatattcttccacttttggtccctc 503  Q
    |||||||||||||| |||| | | ||||||||||||||||||||||    
T  7819322 tagattttgtccctgtaatgtcagattcttccacttttggtccctc 7819277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 12904962 - 12904906
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||| ||||| |||||||||   ||||||||||||||||| || |||||||||||||    
T  12904962 gggtaaatacatcttttcgtttatgtaatattagcgaattttgattttagtccctgt 12904906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 440
Target Start/End: Original strand, 48579869 - 48579917
Alignment:
Q  392 ttaatacctcttttcgtccttgtaatattagcgaattctggttttagtc 440  Q
    ||||||||||||||||||| |||||||||| |||| |  ||||||||||    
T  48579869 ttaatacctcttttcgtccctgtaatattaacgaagttcggttttagtc 48579917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 1e-30; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 387 - 507
Target Start/End: Original strand, 39711072 - 39711191
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattct 486  Q
    |||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||        |||||||||||||||| | |||||| |||||||    
T  39711072 ttgggtaaatacctcttttcgtc-ttgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccttgtaatttcatattct 39711170  T
Q  487 tccacttttggtccctccttt 507  Q
    |||||||||||||||||||||    
T  39711171 tccacttttggtccctccttt 39711191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 18462286 - 18462405
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||        |||||||||||||||||| |||||| | |||||||    
T  18462286 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttc 18462385  T
Q  489 cacttttggtccctcctttc 508  Q
    || |||||||||||||||||    
T  18462386 catttttggtccctcctttc 18462405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 39711450 - 39711335
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||||  |||||| ||||||||    
T  39711450 gggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattctt 39711351  T
Q  488 ccacttttggtccctc 503  Q
    ||||||||||||||||    
T  39711350 ccacttttggtccctc 39711335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 389 - 502
Target Start/End: Complemental strand, 17606684 - 17606572
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||        |||||||||||||||| | |||||| | |||||||    
T  17606684 gggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaagatttagattttgtccttgtaatttcagattcttc 17606586  T
Q  489 cacttttggtccct 502  Q
    ||||||||||||||    
T  17606585 cacttttggtccct 17606572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 4906962 - 4907077
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| ||||||||||| ||||||| ||||||||||||||         |||||||||||||||||| |||||| ||||||||    
T  4906962 gggtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattctt 4907061  T
Q  488 ccacttttggtccctc 503  Q
    ||||||||||||||||    
T  4907062 ccacttttggtccctc 4907077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 24467629 - 24467748
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||| ||||||||||| ||||||||||||||||||   |||||||||||||        |||||||||||||||||| |||||| | |||||||    
T  24467629 gggtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttc 24467728  T
Q  489 cacttttggtccctcctttc 508  Q
    ||||||||||||||||||||    
T  24467729 cacttttggtccctcctttc 24467748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 389 - 502
Target Start/End: Complemental strand, 20996045 - 20995932
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    ||||||||||||||||| |||| ||||||||||||||||| | |||||||||| |||        ||||||||||||||| || |||||| |||||||||    
T  20996045 gggttaatacctctttttgtccctgtaatattagcgaattttagttttagtccatgtaaaaaaaagatttagattttgtctctgtaatttcatattcttc 20995946  T
Q  489 cacttttggtccct 502  Q
    ||||||||||||||    
T  20995945 cacttttggtccct 20995932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 388 - 508
Target Start/End: Original strand, 48071960 - 48072081
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattct 486  Q
    |||||||||| |||||||||| | |||||||||||||||||||||||||||| |||||         |||||||||||||||||| |||||| ||||| |    
T  48071960 tgggttaatatctcttttcgttcatgtaatattagcgaattctggttttagttcctgtaataaaaaagatttagattttgtccctgtaatttcatattat 48072059  T
Q  487 tccacttttggtccctcctttc 508  Q
    |||||||||| |||||||||||    
T  48072060 tccacttttgctccctcctttc 48072081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 385 - 500
Target Start/End: Complemental strand, 39826428 - 39826312
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatat 483  Q
    |||||||| ||||||||||||||||| |||||||||||||||||  |||||||||||||||         |||||||||||||||||| |||||| | ||    
T  39826428 ttttgggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagat 39826329  T
Q  484 tcttccacttttggtcc 500  Q
    |||||||||||||||||    
T  39826328 tcttccacttttggtcc 39826312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 52058386 - 52058266
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||||||| |||||         |||||||||| ||||||| |||||| | ||||||    
T  52058386 gggtaaatacctcttttcgtccctgtaatattagcgaattttggttttagttcctgtagaaaaaaagatttagattatgtccctgtaatttcagattctt 52058287  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||    
T  52058286 ccacttttggtccctcctttc 52058266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 29696565 - 29696684
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||| |||||||||||||||||  |||||||||| ||||        |||||||||||||||||  |||||| |||||||||    
T  29696565 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaagatttagattttgtccccgtaatttcatattcttc 29696664  T
Q  489 cacttttggtccctcctttc 508  Q
    ||||||| ||| ||||||||    
T  29696665 cactttttgtcactcctttc 29696684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 34749138 - 34749252
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||| ||||||| ||| |||||||||||||||||||| ||||||||||| |        |||||||||||||||||  |||||| |||||||||    
T  34749138 gggtaaatacatcttttcatccctgtaatattagcgaattctgattttagtccctataaaaaaaagatttagattttgtccccgtaatttcatattcttc 34749237  T
Q  489 cacttttggtccctc 503  Q
    |||||||||||||||    
T  34749238 cacttttggtccctc 34749252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 8293186 - 8293070
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn--gatttagattttgtccctataatttaatattct 486  Q
    |||| ||||||||||||||||| | |||||||| |||||||| ||||||||||||||          |||||||||||||||||| |||||| |||||||    
T  8293186 gggtaaatacctcttttcgtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 8293087  T
Q  487 tccacttttggtccctc 503  Q
    |||||||||||||||||    
T  8293086 tccacttttggtccctc 8293070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 384 - 503
Target Start/End: Original strand, 33628685 - 33628805
Alignment:
Q  384 attttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaata 482  Q
    |||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||         |||||||||||||||||  |||||| | |    
T  33628685 atttagggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccccgtaaaaaaaaagatttagattttgtccccgtaatttcaga 33628784  T
Q  483 ttcttccacttttggtccctc 503  Q
    ||||| |||||||||||||||    
T  33628785 ttctttcacttttggtccctc 33628805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 389 - 507
Target Start/End: Complemental strand, 33629068 - 33628949
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||          | || |||||||||||| |||||| | ||||||    
T  33629068 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaatttgattttgtccctgtaatttcagattctt 33628969  T
Q  488 ccacttttggtccctccttt 507  Q
    ||||||||||||||||||||    
T  33628968 ccacttttggtccctccttt 33628949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 508
Target Start/End: Original strand, 42510011 - 42510134
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatatt 484  Q
    ||||||||||||||  |||||  ||| |||||||||||||||||| ||||||| |||||||         ||||||||||||||||| |||||| |||||    
T  42510011 ttttgggttaatactactttttatccctgtaatattagcgaattccggttttaatccctgtaaaaaaataatttagattttgtccctgtaatttcatatt 42510110  T
Q  485 cttccacttttggtccctcctttc 508  Q
    ||||||||||| ||||||| ||||    
T  42510111 cttccacttttagtccctcatttc 42510134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 4907340 - 4907220
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| |||| || ||||| ||| ||||||||||||||||||  ||||||||||||||         |||||||||||||||||| |||||| | ||||||    
T  4907340 gggtaaatatctattttcctccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattctt 4907241  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||    
T  4907240 ccacttttggtccctcctttc 4907220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 385 - 508
Target Start/End: Original strand, 8292800 - 8292924
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatat 483  Q
    |||||||| |||| |||||||||||| |||| ||||||||||| | |||||||||||||||         ||||||||||||||||||  ||||| ||||    
T  8292800 ttttgggtaaataactcttttcgtccctgtactattagcgaatcccggttttagtccctgtaaaataaaagatttagattttgtccctgaaatttcatat 8292899  T
Q  484 tcttccacttttggtccctcctttc 508  Q
    ||||||||||||||| |||| ||||    
T  8292900 tcttccacttttggttcctcttttc 8292924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 377 - 508
Target Start/End: Original strand, 17606292 - 17606428
Alignment:
Q  377 aaatttaattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-----nnnnnnnngatttagattttgtccct 471  Q
    ||||| ||||| || | ||||||||||||||||| |||||||||||||||||| | |||||||||||||             |||||||||||||| |||    
T  17606292 aaattaaatttaggataaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaaaagatttagattttgttcct 17606391  T
Q  472 ataatttaatattcttccacttttggtccctcctttc 508  Q
     |||||| |||||||||||||||||||||||| ||||    
T  17606392 gtaatttcatattcttccacttttggtccctcatttc 17606428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 387 - 508
Target Start/End: Complemental strand, 39971026 - 39970903
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt--nnnnnnnngatttagattttgtccctataatttaatatt 484  Q
    |||||| ||||||||||||||||| |||||||||| ||||||  |||||||||||||||          |||||||||||||||||| |||||| | ||     
T  39971026 ttgggtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaattttagatc 39970927  T
Q  485 cttccacttttggtccctcctttc 508  Q
    |||||||||||||||||| |||||    
T  39970926 cttccacttttggtcccttctttc 39970903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 508
Target Start/End: Complemental strand, 24468006 - 24467885
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatat 483  Q
    |||||||| |||||||||||||   | ||||||||||| |||||| |||||||||||||||         |||||||||||||||||| |||||| | ||    
T  24468006 ttttgggtaaatacctcttttc---catgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagat 24467910  T
Q  484 tcttccacttttggtccctcctttc 508  Q
    |||||||||||||||||||| ||||    
T  24467909 tcttccacttttggtccctcatttc 24467885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 27039638 - 27039752
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||| |||| |||          ||||||||||||||||| ||| ||| |||||||    
T  27039638 gggttaatacctcttttcgtccctgtaatatgagcgaattccggttttggtccttgtaaaaaaaaagtttagattttgtccctacaatataagattcttc 27039737  T
Q  489 cacttttggtccctc 503  Q
    |||| ||||||||||    
T  27039738 cactattggtccctc 27039752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 388 - 508
Target Start/End: Original strand, 52058010 - 52058131
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattct 486  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||||||||  ||||         |||||||| | ||||||| |||||| | |||||    
T  52058010 tgggtaaatacctcttttcgtccttgtaatattaacgaattccggttttagtttctgtaaaaaaaaagatttagactatgtccctgtaatttcagattct 52058109  T
Q  487 tccacttttggtccctcctttc 508  Q
    ||||||||||||||||| ||||    
T  52058110 tccacttttggtccctcatttc 52058131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 30299232 - 30299351
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| ||||||||||||||| |  | ||||||||| |||         |||||||||||||||||| |||||| ||||||||    
T  30299232 gggtaaatacctcttttcgtccctgtaatattagcgaacttcgattttagtcc-tgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 30299330  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||| ||||||||    
T  30299331 ccacttttggtctctcctttc 30299351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 503
Target Start/End: Complemental strand, 30299613 - 30299494
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatat 483  Q
    |||||||| ||||||| ||||||||  |||||||||||| ||||  ||||||||| |||||         |||||||||||||||||| |||||| | ||    
T  30299613 ttttgggtaaatacctattttcgtctctgtaatattagcaaatttcggttttagttcctgtaaaaaaaaagatttagattttgtccctgtaattttagat 30299514  T
Q  484 tcttccacttttggtccctc 503  Q
    ||||||||||||||||||||    
T  30299513 tcttccacttttggtccctc 30299494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 39826050 - 39826165
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| | |||||||||||||||  | |||||||||||||         |||||||||||||||||| |||||| | ||||||    
T  39826050 gggtaaatacctcttttcgtccatataatattagcgaatttcgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 39826149  T
Q  488 ccacttttggtccctc 503  Q
    ||||||||| ||||||    
T  39826150 ccacttttgatccctc 39826165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 443
Target Start/End: Complemental strand, 17502111 - 17502053
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccct 443  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||| |||||||||||||    
T  17502111 ttttgggttaatatcacttttggtccttgtaatattagcgaattccggttttagtccct 17502053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 29696935 - 29696821
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| |||||||||||||||   |||||||||||||||||| |||||||||| ||||         | ||||||||||||| | |||||| | |||||||    
T  29696935 gggtaaatacctcttttcgtttatgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaattagattttgtccatgtaatttcagattcttc 29696836  T
Q  489 cacttttggtccctc 503  Q
    |||||||||||||||    
T  29696835 cacttttggtccctc 29696821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 454 - 508
Target Start/End: Original strand, 43539413 - 43539467
Alignment:
Q  454 gatttagattttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    |||||||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  43539413 gatttagattttgtccctgtaattttatattgttccacttttggtccctcctttc 43539467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 497
Target Start/End: Complemental strand, 48072339 - 48072230
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| |||||||||||||||| |||||||||||| |||||| ||||||||||| |||          ||||||||| ||||||| |||||| ||||||||    
T  48072339 gggtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtccttgtaaaaaaaaatatttagattatgtccctgtaatttcatattctt 48072240  T
Q  488 ccacttttgg 497  Q
    ||||||||||    
T  48072239 ccacttttgg 48072230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 507
Target Start/End: Complemental strand, 34749487 - 34749364
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatat 483  Q
    |||||||| |||||||||||| |||  |||||||||| ||||||| | ||||||||| |||         |||||||||||| ||||| |||||| | ||    
T  34749487 ttttgggtaaatacctctttttgtctctgtaatattatcgaattccgattttagtccttgtaaaaaaaaagatttagattttatccctgtaatttcagat 34749388  T
Q  484 tcttccacttttggtccctccttt 507  Q
    ||||||||||||||| ||||||||    
T  34749387 tcttccacttttggtacctccttt 34749364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 414 - 503
Target Start/End: Complemental strand, 30252251 - 30252161
Alignment:
Q  414 taatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattcttccacttttggtccctc 503  Q
    ||||||||||||||||||||||||||||||||         |||||||||||||||||  |||||| ||||||||||| ||||| ||||||    
T  30252251 taatattagcgaattctggttttagtccctgtaaaaataaagatttagattttgtccccgtaatttcatattcttccatttttgatccctc 30252161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 18342396 - 18342339
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||| ||||||| ||||||||| |||||||||||||||||  |||||||||||||||    
T  18342396 tgggtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgt 18342339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 20995698 - 20995754
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||| ||||||||||||| ||  |||||||||||||||||| |||||||||||||||    
T  20995698 gggtaaatacctcttttcatctctgtaatattagcgaattccggttttagtccctgt 20995754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 43539725 - 43539669
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||||||| |||||||||||| |||||||||||| ||||| ||||||||| |||||    
T  43539725 gggttaatagctcttttcgtccctgtaatattagcaaattccggttttagttcctgt 43539669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 508
Target Start/End: Complemental strand, 18462657 - 18462542
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattcttccact 492  Q
    ||||||||||||| ||| |||||||||||| ||||| ||||||||| | |||         |||||||||||||||||  |||||| | |||||||||||    
T  18462657 aatacctcttttcctccctgtaatattagcaaattccggttttagttcttgtataaaaaaagatttagattttgtccccgtaatttcagattcttccact 18462558  T
Q  493 tttggtccctcctttc 508  Q
    ||||||| ||| ||||    
T  18462557 tttggtctctcatttc 18462542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 441
Target Start/End: Complemental strand, 42510392 - 42510341
Alignment:
Q  390 ggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtcc 441  Q
    |||||||||| ||||| |||| |||||||||||||||||| |||||||||||    
T  42510392 ggttaataccacttttggtccctgtaatattagcgaattccggttttagtcc 42510341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 440
Target Start/End: Complemental strand, 13230115 - 13230059
Alignment:
Q  384 attttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtc 440  Q
    ||||||||| ||||||||||||||||  || ||||||||||||||  ||||||||||    
T  13230115 attttgggtaaatacctcttttcgtctctgaaatattagcgaatttcggttttagtc 13230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 17500769 - 17500825
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||||||||||  |||| |||| |||||||||||||||||| |||||||||| ||||    
T  17500769 gggttaataccatttttggtccctgtaatattagcgaattccggttttagtctctgt 17500825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 43400753 - 43400809
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||||||||||||||||||||  | |||||| ||||||||| |||||| ||||||||    
T  43400753 gggttaatacctcttttcgtctctataatatgagcgaattccggttttggtccctgt 43400809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 502
Target Start/End: Complemental strand, 16294258 - 16294211
Alignment:
Q  455 atttagattttgtccctataatttaatattcttccacttttggtccct 502  Q
    ||||||||||||||| | |||||| |||||| ||||||||||||||||    
T  16294258 atttagattttgtccttgtaatttcatattcctccacttttggtccct 16294211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 443
Target Start/End: Original strand, 37236721 - 37236772
Alignment:
Q  392 ttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccct 443  Q
    |||||| ||||||| |||| |||||||| ||||||||| |||||||||||||    
T  37236721 ttaatatctcttttggtccctgtaatatgagcgaattccggttttagtccct 37236772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 508
Target Start/End: Original strand, 7473862 - 7473912
Alignment:
Q  458 tagattttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    |||||| |||| || |||||| |||||||||||||||||||||||| ||||    
T  7473862 tagattatgtctctgtaatttcatattcttccacttttggtccctcatttc 7473912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Original strand, 21091786 - 21091839
Alignment:
Q  386 tttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagt 439  Q
    |||||||||||||  ||||| |||| | |||||||| |||||||||||||||||    
T  21091786 tttgggttaatacaacttttggtccctataatattatcgaattctggttttagt 21091839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 503
Target Start/End: Original strand, 39970712 - 39970761
Alignment:
Q  454 gatttagattttgtccctataatttaatattcttccacttttggtccctc 503  Q
    |||||||||||||||  | |||||| | ||||||||||||||||||||||    
T  39970712 gatttagattttgtctatgtaatttcagattcttccacttttggtccctc 39970761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 26271263 - 26271207
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||||||||||||||| ||||  |||||||||||||| |  |||||| ||||||||    
T  26271263 gggttaatacctcttttagtcccagtaatattagcgaaattcggttttggtccctgt 26271207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 4e-30; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 14143902 - 14144021
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||        |||||||||||||||||| |||||| |||||||||    
T  14143902 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 14144001  T
Q  489 cacttttggtccctcctttc 508  Q
    |||||||||| |||| ||||    
T  14144002 cacttttggtacctcatttc 14144021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 385 - 508
Target Start/End: Complemental strand, 41001734 - 41001611
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatatt 484  Q
    |||| ||| ||||||| ||||||||| |||||||||||||||||| ||||||||||| |||        ||||||||||||||||||||||||| | |||    
T  41001734 ttttaggtaaataccttttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaagatttagattttgtccctataatttcagatt 41001635  T
Q  485 cttccacttttggtccctcctttc 508  Q
    ||||||||||||||||||||||||    
T  41001634 cttccacttttggtccctcctttc 41001611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 380 - 508
Target Start/End: Complemental strand, 23979288 - 23979159
Alignment:
Q  380 tttaattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataattt 478  Q
    |||| |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||         |||||||||||||||||| ||||||    
T  23979288 tttatttttgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattt 23979189  T
Q  479 aatattcttccacttttggtccctcctttc 508  Q
     | |||||||||||||||||||||| ||||    
T  23979188 caaattcttccacttttggtccctcatttc 23979159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 386 - 502
Target Start/End: Original strand, 7125915 - 7126031
Alignment:
Q  386 tttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattc 485  Q
    ||||| ||||||||||||||||| | |||||||||||||||||| | |||||||||||||        ||||||||||||||||||||||||| | ||||    
T  7125915 tttggtttaatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtccctataatttcagattc 7126014  T
Q  486 ttccacttttggtccct 502  Q
    |||||||||||||||||    
T  7126015 ttccacttttggtccct 7126031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 20709589 - 20709470
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||        |||||||||||||||| | |||||| |||||||||    
T  20709589 gggttaatacctcttttcgtccatgtaatattaacgaattttggttttagtccctgtaaaaaaaagatttagattttgtccatgtaatttcatattcttc 20709490  T
Q  489 cacttttggtccctcctttc 508  Q
    ||||||| |||| |||||||    
T  20709489 cactttttgtccttcctttc 20709470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 380 - 503
Target Start/End: Complemental strand, 17762669 - 17762545
Alignment:
Q  380 tttaattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataattt 478  Q
    |||| ||| |||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||         ||||||||||||||||| |||||||    
T  17762669 tttattttagggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccataattt 17762570  T
Q  479 aatattcttccacttttggtccctc 503  Q
     | ||||||||||||||||||||||    
T  17762569 cagattcttccacttttggtccctc 17762545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 6817123 - 6817242
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||        |||||||||| ||||| | |||||| | |||||||    
T  6817123 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaagatttagattatgtccatgtaatttcagattcttc 6817222  T
Q  489 cacttttggtccctcctttc 508  Q
    ||||||||||||||| ||||    
T  6817223 cacttttggtccctcatttc 6817242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 389 - 507
Target Start/End: Original strand, 17762283 - 17762401
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| |||||||||||| |||| |||||||||||||||||| |||||||||||||||        |||||| ||||||| ||| |||||| | |||||||    
T  17762283 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttatattttgttcctgtaatttcagattcttc 17762382  T
Q  489 cacttttggtccctccttt 507  Q
    |||||||||||||||||||    
T  17762383 cacttttggtccctccttt 17762401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 7126295 - 7126175
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||| ||| |||||||||||||||||| ||||||||||  |||         |||||||||||||||||| |||||| ||||||||    
T  7126295 gggtaaatacctcttttcatccctgtaatattagcgaattccggttttagtctttgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 7126196  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||    
T  7126195 ccacttttggtccctcctttc 7126175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 24074303 - 24074423
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnng-atttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| |||||||||||||||||  |||||||||||||||          |||||||||||||| || |||||| ||||||||    
T  24074303 gggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattctt 24074402  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||    
T  24074403 ccacttttggtccctcctttc 24074423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 24837169 - 24837284
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| ||||||| |||||||||| |||||||||||||||         |||||||||||||||| | |||||| ||||||||    
T  24837169 gggtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 24837268  T
Q  488 ccacttttggtccctc 503  Q
    ||||||||||||||||    
T  24837269 ccacttttggtccctc 24837284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 393 - 508
Target Start/End: Complemental strand, 27159328 - 27159215
Alignment:
Q  393 taatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccact 492  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||| |||         ||||||||||||||||| |||||| ||||||||||| |    
T  27159328 taatacctcttttcgtccttgtaatattagcgaatttcggttttagtccttgtaaaaaaa--atttagattttgtccctgtaattttatattcttccatt 27159231  T
Q  493 tttggtccctcctttc 508  Q
    |||||||||| |||||    
T  27159230 tttggtcccttctttc 27159215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 383 - 508
Target Start/End: Original strand, 14411691 - 14411817
Alignment:
Q  383 aattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaat 481  Q
    ||||| |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||         |||||| ||||||||  | |||||| |     
T  14411691 aatttagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtataaaaaaagatttatattttgtctatgtaatttcag 14411790  T
Q  482 attcttccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||||||||    
T  14411791 attcttccacttttggtccctcctttc 14411817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 379 - 502
Target Start/End: Complemental strand, 14144289 - 14144165
Alignment:
Q  379 atttaattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatt 477  Q
    |||| |||| |||||||||||||||||||||  |||||||||| ||||||| | |||||||||||||         |||||||||||||||||| |||||    
T  14144289 attttatttagggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatt 14144190  T
Q  478 taatattcttccacttttggtccct 502  Q
    | | |||||||||||||||||||||    
T  14144189 tcaaattcttccacttttggtccct 14144165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 24837547 - 24837427
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| ||||||||||||||||||  ||||||||||||||         |||||||||||||||||| |||||| | ||||||    
T  24837547 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 24837448  T
Q  488 ccacttttggtccctcctttc 508  Q
    | ||||||| |||||||||||    
T  24837447 ctacttttgctccctcctttc 24837427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 388 - 502
Target Start/End: Original strand, 31799639 - 31799754
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattct 486  Q
    ||||| ||||||||||||||||| | |||||||||||||||| ||||| |||||||||         |||||||||||||||||| |||||| | |||||    
T  31799639 tgggtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 31799738  T
Q  487 tccacttttggtccct 502  Q
    ||||||||||||||||    
T  31799739 tccacttttggtccct 31799754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 30512288 - 30512402
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| |||| |||||||||||| ||||||||||| ||||| ||||||||||||||||        ||||||||||| |||||| |||||| | ||| |||    
T  30512288 gggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaaggatttagatttggtccctgtaatttcagatttttc 30512387  T
Q  489 cacttttggtccctc 503  Q
    |||||||||||||||    
T  30512388 cacttttggtccctc 30512402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 30552628 - 30552742
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| |||| |||||||||||| ||||||||||| ||||| ||||||||||||||||        ||||||||||| |||||| |||||| | ||| |||    
T  30552628 gggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaaggatttagatttggtccctgtaatttcagatttttc 30552727  T
Q  489 cacttttggtccctc 503  Q
    |||||||||||||||    
T  30552728 cacttttggtccctc 30552742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 386 - 502
Target Start/End: Complemental strand, 18336836 - 18336720
Alignment:
Q  386 tttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatatt 484  Q
    ||||||| ||||||||||||||||| ||||| |||||||||||| |||||||||||||||         |||||||||||||||||| |||||| | |||    
T  18336836 tttgggtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagatt 18336738  T
Q  485 cttccacttttggtccct 502  Q
    |||||||||||| |||||    
T  18336737 cttccacttttgatccct 18336720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 502
Target Start/End: Original strand, 27158991 - 27159104
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||||||||||||||||||||| |||||||||||||||||   ||||||||| | ||        |||||| ||||||||||| |||||| | |||||||    
T  27158991 gggttaatacctcttttcgtccatgtaatattagcgaatttcagttttagtctcagttaaaaaaagatttaaattttgtccctgtaatttcagattcttc 27159090  T
Q  489 cacttttggtccct 502  Q
    ||||||||||||||    
T  27159091 cacttttggtccct 27159104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 394 - 508
Target Start/End: Original strand, 29444811 - 29444926
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattcttccact 492  Q
    |||| |||||||||||| |||||||||| ||||||||| |||||||||||||         |||||||||| ||||| | |||||| ||||||||| |||    
T  29444811 aatatctcttttcgtccctgtaatattaacgaattctgattttagtccctgtaaaaaaaaggatttagattatgtccttgtaatttcatattcttctact 29444910  T
Q  493 tttggtccctcctttc 508  Q
    ||||||||||||||||    
T  29444911 tttggtccctcctttc 29444926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 4918989 - 4919105
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn--gatttagattttgtccctataatttaatattct 486  Q
    |||| ||||||||||||| ||  |||||||||||||||||  ||||||||| |||||          |||||||||||||||||| |||||| |||||||    
T  4918989 gggtaaatacctcttttcatctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 4919088  T
Q  487 tccacttttggtccctc 503  Q
    |||||||||||||||||    
T  4919089 tccacttttggtccctc 4919105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 387 - 508
Target Start/End: Original strand, 18336465 - 18336588
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt--nnnnnnnngatttagattttgtccctataatttaatatt 484  Q
    |||||| |||| |||||||||||| | |||||||||||||||| | |||||||||||||          |||||||||||||||||| |||||| | |||    
T  18336465 ttgggtaaatatctcttttcgtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagatt 18336564  T
Q  485 cttccacttttggtccctcctttc 508  Q
    ||||| |||||| |||||||||||    
T  18336565 cttccgcttttgatccctcctttc 18336588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 394 - 508
Target Start/End: Complemental strand, 4919362 - 4919248
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccactt 493  Q
    ||||||||||||||||  || ||||||||||||||| ||||||||| |||||         | ||||||||||||||| |||||| | ||||||| ||||    
T  4919362 aatacctcttttcgtctctggaatattagcgaattccggttttagttcctgtaaaaaaaaaaattagattttgtccctgtaatttcagattcttctactt 4919263  T
Q  494 ttggtccctcctttc 508  Q
    ||| |||||||||||    
T  4919262 ttgatccctcctttc 4919248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 502
Target Start/End: Complemental strand, 29445183 - 29445070
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    ||||||||| |||||||||||| ||||||||||||||||||  |||||||| |||||         |||||||||||||||| | |||||| | ||||||    
T  29445183 gggttaatatctcttttcgtccctgtaatattagcgaattccagttttagt-cctgtaaaaaaaaagatttagattttgtccttgtaatttcagattctt 29445085  T
Q  488 ccacttttggtccct 502  Q
    |||||||||||||||    
T  29445084 ccacttttggtccct 29445070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 503
Target Start/End: Original strand, 993755 - 993862
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccactt 493  Q
    ||||| ||||||||||  |||||||||||||||||| |||||||||||||||         | |||||||| |||| | |||||| ||||||||||||||    
T  993755 aatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaa--aattagatttagtccttgtaatttcatattcttccactt 993852  T
Q  494 ttggtccctc 503  Q
    ||||||||||    
T  993853 ttggtccctc 993862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 455 - 508
Target Start/End: Complemental strand, 6817432 - 6817379
Alignment:
Q  455 atttagattttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    ||||||||||||||||| |||||| |||||||||||||||||||| ||||||||    
T  6817432 atttagattttgtccctgtaatttcatattcttccacttttggtcactcctttc 6817379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 403 - 500
Target Start/End: Original strand, 41001370 - 41001465
Alignment:
Q  403 tttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccacttttggtcc 500  Q
    |||||||| |||||||||||||||||  |||||||||||||||         | ||||||||||||||| |||||| |||||||||||||||||||||    
T  41001370 tttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaa--aattagattttgtccctgtaatttcatattcttccacttttggtcc 41001465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 24651077 - 24650957
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||  |||||||||||||||||| ||||||||||| |||          || |||||||| ||||| |||||| | ||||||    
T  24651077 gggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccatgtaaaaaagaaaatctagattttatccctgtaattttagattctt 24650978  T
Q  488 ccacttttggtccctcctttc 508  Q
    ||||||||| |||||||||||    
T  24650977 ccacttttgatccctcctttc 24650957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 507
Target Start/End: Complemental strand, 994127 - 994005
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatat 483  Q
    |||||||| ||||||| |||| ||||  |||||| |||||||||  |||||||||||||||         |||||||||||||||||| |||||  | ||    
T  994127 ttttgggtaaatacctttttt-gtccccgtaataatagcgaatttcggttttagtccctgtagaataaaagatttagattttgtccctgtaattgcagat 994029  T
Q  484 tcttccacttttggtccctccttt 507  Q
    ||||||||||||||||||||||||    
T  994028 tcttccacttttggtccctccttt 994005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 508
Target Start/End: Complemental strand, 31800012 - 31799898
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattcttccact 492  Q
    ||||||||||||||||| | |||||||||||||||| ||||||||| |||||         |||||||||||||||| | |||||| | |||||||| ||    
T  31800012 aatacctcttttcgtccctataatattagcgaattccggttttagt-cctgtaaaaaaaaagatttagattttgtccatgtaatttcagattcttcctct 31799914  T
Q  493 tttggtccctcctttc 508  Q
    |||| |||||||||||    
T  31799913 tttgatccctcctttc 31799898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 502
Target Start/End: Complemental strand, 24074682 - 24074566
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatatta--gcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattc 485  Q
    ||||||||  |||||||| | ||||||||||||  |||||||| ||||||| |||||||         |||||||||||||||| | |||||| ||||||    
T  24074682 gggttaatttctcttttcattcttgtaatattatagcgaattccggttttaatccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattc 24074583  T
Q  486 ttccacttttggtccct 502  Q
    |||||||||||||||||    
T  24074582 ttccacttttggtccct 24074566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 22571077 - 22571197
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    ||||||||||   |||| ||||||||||||||||||||||| | |||||||||||||          ||||||||| | || || |||||| ||||||||    
T  22571077 gggttaatactgatttttgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatttagattatatctctgtaatttcatattctt 22571176  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||| ||||    
T  22571177 ccacttttggtccctcatttc 22571197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 498
Target Start/End: Original strand, 24650707 - 24650810
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccactt 493  Q
    ||||||||||||||||| |||||||||| ||||||  ||||||| ||  |||        |||||||||||||| ||| |||||| ||||||||||||||    
T  24650707 aatacctcttttcgtccctgtaatattaacgaatttcggttttaatctatgtaaaaaaa-gatttagattttgttcctgtaatttcatattcttccactt 24650805  T
Q  494 ttggt 498  Q
    |||||    
T  24650806 ttggt 24650810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 456 - 503
Target Start/End: Original strand, 32233967 - 32234014
Alignment:
Q  456 tttagattttgtccctataatttaatattcttccacttttggtccctc 503  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||||    
T  32233967 tttagattttgtccctatcatttgagattcttccacttttggtccctc 32234014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 14412043 - 14411929
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||| ||  | |||||||| ||||||  |||||||||||||||         ||||||||||||||| | |||||| | |||||||    
T  14412043 gggtaaatacctcttttcatctctataatattaacgaatttcggttttagtccctgtaaaaaaaaaatttagattttgtccttgtaatttcagattcttc 14411944  T
Q  489 cacttttggtccctc 503  Q
    ||| |||||||||||    
T  14411943 cacgtttggtccctc 14411929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 508
Target Start/End: Original strand, 20709278 - 20709332
Alignment:
Q  454 gatttagattttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    |||||||||| ||||||| |||||| | |||||||||||||||||||||| ||||    
T  20709278 gatttagattctgtccctgtaatttcaaattcttccacttttggtccctcatttc 20709332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 41424516 - 41424562
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttt 435  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  41424516 gggttaatacctcttttggtccttgcaatattagcgaattccggttt 41424562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 28070466 - 28070522
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||||||||||  |||| |||| |||||||| || ||||||| ||||||||||||||    
T  28070466 gggttaataccatttttggtccctgtaatatgagtgaattctagttttagtccctgt 28070522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 441
Target Start/End: Complemental strand, 41425830 - 41425778
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtcc 441  Q
    ||||||||||||||||| |||| || ||||| ||||||||||| |||| ||||    
T  41425830 gggttaatacctcttttggtccctgcaatatcagcgaattctgattttggtcc 41425778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 383 - 502
Target Start/End: Complemental strand, 14162254 - 14162135
Alignment:
Q  383 aattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaata 482  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||        |||||||||||||||| | |||||| | |    
T  14162254 aattttgggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaagagatttagattttgtccttgtaatttcaga 14162155  T
Q  483 ttcttccacttttggtccct 502  Q
    ||||||||||||||||||||    
T  14162154 ttcttccacttttggtccct 14162135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 9266975 - 9267090
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||         |||||||||||||||||| |||||| ||||||||    
T  9266975 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 9267074  T
Q  488 ccacttttggtccctc 503  Q
    ||||||||||||||||    
T  9267075 ccacttttggtccctc 9267090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 30500418 - 30500299
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||| ||||||||||||||||||  ||||||||||||||         ||||||||||||||||| |||||| ||||| |||    
T  30500418 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaatttagattttgtccctgtaatttcatattgttc 30500319  T
Q  489 cacttttggtccctcctttc 508  Q
    ||||||||||||||||||||    
T  30500318 cacttttggtccctcctttc 30500299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 394 - 508
Target Start/End: Complemental strand, 52553061 - 52552946
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattcttccact 492  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||         ||||||||||||||| || |||||| |||||||||||||    
T  52553061 aatacatcttttcgtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcatattcttccact 52552962  T
Q  493 tttggtccctcctttc 508  Q
    ||||||||||||||||    
T  52552961 tttggtccctcctttc 52552946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 14262414 - 14262294
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||         |||||||||||||||||| |||||| ||||| ||    
T  14262414 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattgtt 14262315  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||| ||||||||||||    
T  14262314 ccacttttagtccctcctttc 14262294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 389 - 502
Target Start/End: Original strand, 30500043 - 30500155
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||||||||||||||||| ||| |||||||||||||||||  |||||||||||||||         ||||||||||||||||| |||||| |||||||||    
T  30500043 gggttaatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa-atttagattttgtccctgtaatttcatattcttc 30500141  T
Q  489 cacttttggtccct 502  Q
    ||||||||||||||    
T  30500142 cacttttggtccct 30500155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 387 - 502
Target Start/End: Complemental strand, 5800984 - 5800869
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattc 485  Q
    |||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||         |||||||||||||||| | |||||| ||||||    
T  5800984 ttgggttaatacctcttttcgtccctgtaatattagcgaattccgg-tttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattc 5800886  T
Q  486 ttccacttttggtccct 502  Q
    |||||||||||||||||    
T  5800885 ttccacttttggtccct 5800869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 14171964 - 14171844
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||         |||||||||||||||||| ||||||   ||||||    
T  14171964 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctgattctt 14171865  T
Q  488 ccacttttggtccctcctttc 508  Q
    ||||||||||||| |||||||    
T  14171864 ccacttttggtccttcctttc 14171844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 389 - 502
Target Start/End: Original strand, 19112764 - 19112879
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt--nnnnnnnngatttagattttgtccctataatttaatattct 486  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||          ||||||||||||||||||  ||||| |||||||    
T  19112764 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatattct 19112863  T
Q  487 tccacttttggtccct 502  Q
    ||||||||||||||||    
T  19112864 tccacttttggtccct 19112879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 33372406 - 33372526
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||| |||||         |||||||||||||||||| |||||| | ||| ||    
T  33372406 gggtaaatatctcttttcgtccctgtaatattagcgaattctggttttagttcctgtaaataaaaagatttagattttgtccctgtaatttcagattatt 33372505  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||    
T  33372506 ccacttttggtccctcctttc 33372526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 9267352 - 9267233
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| |||||||||||||||||||||||||||||||||||| | |||||||||||||          |||||||||||||||| |||| | | |||||||    
T  9267352 gggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtatataaattttttagattttgtccctgtaatatcagattcttc 9267253  T
Q  489 cacttttggtccctcctttc 508  Q
     |||||||||||||||||||    
T  9267252 tacttttggtccctcctttc 9267233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 389 - 502
Target Start/End: Complemental strand, 16722369 - 16722255
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| |||||||||||||||||   ||||||||||||||         |||||||||||||||||| |||||| ||||||||    
T  16722369 gggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatttcatattctt 16722270  T
Q  488 ccacttttggtccct 502  Q
    |||||||||||||||    
T  16722269 ccacttttggtccct 16722255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 388 - 508
Target Start/End: Original strand, 5800604 - 5800725
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnng-atttagattttgtccctataatttaatattct 486  Q
    ||||| ||||||||||||||||| |||||||||| ||||||  |||||||||||||||        | ||||||||| ||||||| |||||| |||||||    
T  5800604 tgggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattct 5800703  T
Q  487 tccacttttggtccctcctttc 508  Q
    |||| |||||||||||||||||    
T  5800704 tccatttttggtccctcctttc 5800725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 20853695 - 20853811
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn--gatttagattttgtccctataatttaatattct 486  Q
    |||| ||||||||||||||||| |||||||||||||||||  |||||||  ||||||          ||||||||||||||||||||||||| |||||||    
T  20853695 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttaaaccctgtaaaaaaaaaagatttagattttgtccctataatttcatattct 20853794  T
Q  487 tccacttttggtccctc 503  Q
    |||||||||||||||||    
T  20853795 tccacttttggtccctc 20853811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 403 - 503
Target Start/End: Complemental strand, 45003859 - 45003759
Alignment:
Q  403 tttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccacttttggtccct 502  Q
    |||||||| |||||||||||||||||  ||||||||| |||||        ||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  45003859 tttcgtccctgtaatattagcgaatttcggttttagttcctgtaaaaaaaagatttagatttagtccctataatttcatattcttccacttttggtccct 45003760  T
Q  503 c 503  Q
    |    
T  45003759 c 45003759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 45969915 - 45970035
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| ||||||||||| |||||| |||||||||||||||         |||||||||||||||||| |||||| | ||||||    
T  45969915 gggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 45970014  T
Q  488 ccacttttggtccctcctttc 508  Q
     ||||||||||| ||||||||    
T  45970015 tcacttttggtctctcctttc 45970035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 389 - 502
Target Start/End: Original strand, 14262036 - 14262150
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    ||||||||| |||||||||||| |||||||||||||||||| ||||||||||| |||          ||||||||||||||||| |||||| | ||||||    
T  14262036 gggttaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagattctt 14262135  T
Q  488 ccacttttggtccct 502  Q
    |||||||||||||||    
T  14262136 ccacttttggtccct 14262150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 383 - 508
Target Start/End: Original strand, 43572383 - 43572509
Alignment:
Q  383 aattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnnga-tttagattttgtccctataatttaat 481  Q
    ||||| |||| ||||| ||||||||| | |||||||||||||||||  |||||||||||||||         | |||||||||||||||| |||||| |     
T  43572383 aatttagggtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcag 43572482  T
Q  482 attcttccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||||||||    
T  43572483 attcttccacttttggtccctcctttc 43572509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 508
Target Start/End: Original strand, 14161870 - 14161991
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattct 486  Q
    ||||| |||| |||||||||||| ||||||||||||||||||  |||||||| ||| |         |||||||||| ||||||| |||||| |||||||    
T  14161870 tgggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctataaaaaaaaagatttagattatgtccctgtaatttcatattct 14161969  T
Q  487 tccacttttggtccctcctttc 508  Q
    ||||||||||||||||||||||    
T  14161970 tccacttttggtccctcctttc 14161991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 11003732 - 11003852
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| |||||||||||| ||||||||||||||| ||||||| |||||||||||||||         || ||||||||||||| | |||||| | ||||||    
T  11003732 gggtaaatacctctttttgtccttgtaatattaccgaattccggttttagtccctgtaaataaaaagacttagattttgtccttgtaatttcagattctt 11003831  T
Q  488 ccacttttggtccctcctttc 508  Q
    ||||||||||||| |||||||    
T  11003832 ccacttttggtccatcctttc 11003852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 16721991 - 16722111
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||| ||||          ||||||||||||||| | |||||| | ||||||    
T  16721991 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagattctt 16722090  T
Q  488 ccacttttggtccctcctttc 508  Q
    ||||||||||||||| |||||    
T  16722091 ccacttttggtcccttctttc 16722111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 19113143 - 19113023
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| | |||||||| ||||||| |||||||||||||||         |||||||||||| ||||| |||||| | ||||||    
T  19113143 gggtaaatacctcttttcgtccctataatattaacgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 19113044  T
Q  488 ccacttttggtccctcctttc 508  Q
    | |||||||||||||||||||    
T  19113043 ctacttttggtccctcctttc 19113023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 20854073 - 20853954
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| |||| |||||||||||| |||||||||||||||||  ||||||||||| |||         |||||||||||||||||| |||||| | ||||||    
T  20854073 gggtaaatatctcttttcgtccatgtaatattagcgaatttcggttttagtcc-tgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 20853975  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||    
T  20853974 ccacttttggtccctcctttc 20853954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 379 - 503
Target Start/End: Original strand, 35740807 - 35740930
Alignment:
Q  379 atttaattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataattt 478  Q
    ||||| ||||||||||||||  ||||| |||| |||||||||||||||||| |||||||||||| ||        | |||||||||||||||| ||||||    
T  35740807 atttatttttgggttaatactacttttggtccctgtaatattagcgaattccggttttagtccccgtaaaaaaaag-tttagattttgtccctgtaattt 35740905  T
Q  479 aatattcttccacttttggtccctc 503  Q
     | |||||||||||||| |||||||    
T  35740906 taaattcttccacttttagtccctc 35740930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 35995678 - 35995793
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||||||||||||           |||||||||||||||| |||||| | ||||||    
T  35995678 gggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcagattctt 35995777  T
Q  488 ccacttttggtccctc 503  Q
    ||||||||||||||||    
T  35995778 ccacttttggtccctc 35995793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 384 - 508
Target Start/End: Original strand, 49986522 - 49986648
Alignment:
Q  384 attttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt--nnnnnnnngatttagattttgtccctataatttaat 481  Q
    |||| |||| ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||          |||||||||||||||||| |||||| |     
T  49986522 atttagggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcag 49986621  T
Q  482 attcttccacttttggtccctcctttc 508  Q
    ||||||| |||||||||| ||||||||    
T  49986622 attcttctacttttggtctctcctttc 49986648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 387 - 488
Target Start/End: Original strand, 19720331 - 19720433
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattc 485  Q
    |||||| |||| |||||||||||| |||||||||||||||||| |||||||||||||||         |||||||||||||||||| |||||| ||||||    
T  19720331 ttgggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 19720430  T
Q  486 ttc 488  Q
    |||    
T  19720431 ttc 19720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 502
Target Start/End: Complemental strand, 15328847 - 15328724
Alignment:
Q  381 ttaattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccc--tgtnnnnnnnngatttagattttgtccctataattt 478  Q
    ||||||| |||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  |          |||||||||||||||||| ||||||    
T  15328847 ttaatttagggttaatacctcttttcatctctgtaatattagcgaattttggttttagtcccaataaaaaaaaaagatttagattttgtccctgtaattt 15328748  T
Q  479 aatattcttccacttttggtccct 502  Q
     | ||| |||||||||||||||||    
T  15328747 cagatttttccacttttggtccct 15328724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 14171587 - 14171701
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| |||||| |||||||||| |||||||||||||||||| | ||||| |  ||||        |||||||||||||||||| |||||| | |||||||    
T  14171587 gggtaaataccacttttcgtccctgtaatattagcgaattccgattttaatttctgtaaaaaaaagatttagattttgtccctgtaatttcaaattcttc 14171686  T
Q  489 cacttttggtccctc 503  Q
    |||||||| ||||||    
T  14171687 cacttttgatccctc 14171701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 387 - 508
Target Start/End: Original strand, 45003494 - 45003616
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattc 485  Q
    |||||| |||| ||||||||||||  ||||||||||| ||||| ||||| ||||||| |         |||||||||||||||||| |||||| | ||||    
T  45003494 ttgggtaaatatctcttttcgtccccgtaatattagcaaattccggtttcagtccctataaaataaaagatttagattttgtccctgtaatttcagattc 45003593  T
Q  486 ttccacttttggtccctcctttc 508  Q
    |||||||||| ||||||||||||    
T  45003594 ttccactttttgtccctcctttc 45003616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 507
Target Start/End: Complemental strand, 17649382 - 17649269
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccactt 493  Q
    |||||||||||||| || ||||||| |||||||||| ||||||||| ||||         |||||||||||||||||| |||||| | ||| |||||| |    
T  17649382 aatacctcttttcgaccctgtaatactagcgaattccggttttagttcctggaaaaaaaagatttagattttgtccctgtaatttcagattattccacat 17649283  T
Q  494 ttggtccctccttt 507  Q
    |||||| |||||||    
T  17649282 ttggtctctccttt 17649269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 27946112 - 27946165
Alignment:
Q  392 ttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||||||||||||||||| |||||||||||||||||  |||||||||||||||    
T  27946112 ttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt 27946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 388 - 508
Target Start/End: Original strand, 4204708 - 4204828
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    ||||| || |||||||||||||| ||||||||||  |||||   |||||||| |||||        |||||||||| ||||||| |||||| | ||||||    
T  4204708 tgggtaaagacctcttttcgtccctgtaatattaatgaatttcagttttagttcctgtaaaaaaaagatttagattatgtccctgtaatttcagattctt 4204807  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||| ||||    
T  4204808 ccacttttggtccctcatttc 4204828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 380 - 503
Target Start/End: Complemental strand, 21633283 - 21633159
Alignment:
Q  380 tttaattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataattt 478  Q
    |||| ||| |||| ||||||| || |||||| |||||||||||||||||   |||||||||||| |         |||||||||||||||||| ||||||    
T  21633283 tttattttagggtaaatacctattctcgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaattt 21633184  T
Q  479 aatattcttccacttttggtccctc 503  Q
     | ||||||||||||||||||||||    
T  21633183 cagattcttccacttttggtccctc 21633159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 27946243 - 27946187
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||| |||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  27946243 gggtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtccctgt 27946187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 498
Target Start/End: Complemental strand, 45970294 - 45970183
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt--nnnnnnnngatttagattttgtccctataatttaatattct 486  Q
    |||| ||||||||||||||||| ||||||||||| |||||  |||||||||||||||          |||||| ||||||||||| |||||| | |||||    
T  45970294 gggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttcagattct 45970195  T
Q  487 tccacttttggt 498  Q
    ||||||||||||    
T  45970194 tccacttttggt 45970183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 508
Target Start/End: Original strand, 38283555 - 38283670
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnnga-tttagattttgtccctataatttaatattcttccact 492  Q
    |||| |||||||| ||| |||||||||| ||||||| ||||||||||| |||         | |||||||||||| |||||||||| ||||| |||||||    
T  38283555 aatatctcttttcatccctgtaatattaacgaattccggttttagtccttgtaaaaaaaaaaatttagattttgttcctataatttcatattgttccact 38283654  T
Q  493 tttggtccctcctttc 508  Q
    |||| |||||||||||    
T  38283655 tttgatccctcctttc 38283670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 43572768 - 43572649
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||| ||| |||||||||  | ||||| ||||||||| |||||         ||||||||| ||||||| |||||| | |||||||    
T  43572768 gggtaaatacctcttttcatccctgtaatattgacaaattccggttttagttcctgtaaaaaaaaaatttagattctgtccctgtaatttcagattcttc 43572669  T
Q  489 cacttttggtccctcctttc 508  Q
    ||||||||||||||| ||||    
T  43572668 cacttttggtccctcatttc 43572649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 36991037 - 36990923
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    ||||||||||  ||||| |||| |||||||||||||||||  |||||||||||||||          |||||||| ||||||| |||||| | |||||||    
T  36991037 gggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagtttagattctgtccctgtaattttagattcttc 36990938  T
Q  489 cacttttggtccctc 503  Q
    ||||||| |||||||    
T  36990937 cacttttagtccctc 36990923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 37016477 - 37016363
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    ||||||||||  ||||| |||| |||||||||||||||||  |||||||||||||||          |||||||| ||||||| |||||| | |||||||    
T  37016477 gggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagtttagattctgtccctgtaattttagattcttc 37016378  T
Q  489 cacttttggtccctc 503  Q
    ||||||| |||||||    
T  37016377 cacttttagtccctc 37016363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 3426026 - 3425973
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccc 442  Q
    ||||||||||||||||| | || |||||||||||||||||| ||||||||||||    
T  3426026 gggttaatacctcttttggcccctgtaatattagcgaattccggttttagtccc 3425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 501
Target Start/End: Complemental strand, 33372782 - 33372669
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| |||||||||||||||||  ||||||||||||||||  | ||||||| |||||         |||||||||||||||||| |||||| | ||||||    
T  33372782 gggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagttcctgttaaaaaaaagatttagattttgtccctgtaatttcagattctt 33372683  T
Q  488 ccacttttggtccc 501  Q
    ||||||||| ||||    
T  33372682 ccacttttgatccc 33372669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 49986906 - 49986791
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnng--atttagattttgtccctataatttaatattct 486  Q
    |||| |||||||||||||||||  ||||||||||||||||  ||||||||| |||||        |  ||||||||||||| | | |||||| |||||||    
T  49986906 gggtaaatacctcttttcgtcccagtaatattagcgaatttcggttttagttcctgtaaaaaaaagaaatttagattttgt-cttgtaatttcatattct 49986808  T
Q  487 tccacttttggtccctc 503  Q
    |||||||||||||||||    
T  49986807 tccacttttggtccctc 49986791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 3424774 - 3424830
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||||||||||||||| |||| |||||||||||||| ||| |||||| ||||||||    
T  3424774 gggttaatacctcttttggtccctgtaatattagcgatttccggttttggtccctgt 3424830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 17465367 - 17465423
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||| |||||||||||| |||||| |||||||||||||||||| ||||||| |||||    
T  17465367 gggtaaatacctctttttgtccttttaatattagcgaattctgattttagtacctgt 17465423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 17465745 - 17465625
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| |||||||||||||||||||||||||||||||||||   |||||| || ||||          ||||| ||||||||||| ||| || | ||||||    
T  17465745 gggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttaatctctgtaaaataaaatatttaaattttgtccctgtaactttagattctt 17465646  T
Q  488 ccacttttggtccctcctttc 508  Q
     ||||||||||||||||||||    
T  17465645 tcacttttggtccctcctttc 17465625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 21632901 - 21633016
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| ||||||||||||||||     |||||||||||||         ||| ||||| |||||||| |||||| | ||||||    
T  21632901 gggtaaatacctcttttcgtccctgtaatattagcgaat-----ttttagtccctgtaaaaaaaaagatctagatgttgtccctgtaatttcagattctt 21632995  T
Q  488 ccacttttggtccctcctttc 508  Q
     ||||||||||||||||||||    
T  21632996 tcacttttggtccctcctttc 21633016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 35741962 - 35741906
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||||||||| ||||| |||| ||||||||||||||||||  ||||||||||||||    
T  35741962 gggttaataccacttttggtccctgtaatattagcgaattccagttttagtccctgt 35741906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 35996053 - 35995997
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||| ||||| ||||||||||| |||||||||||||||||| | |||||||||||||    
T  35996053 gggtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgt 35995997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 436
Target Start/End: Original strand, 1067710 - 1067761
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggtttt 436  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  1067710 tttttggttaatacctcttttggtccttgtaatatcagcgaattctgatttt 1067761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 455 - 502
Target Start/End: Complemental strand, 38283861 - 38283814
Alignment:
Q  455 atttagattttgtccctataatttaatattcttccacttttggtccct 502  Q
    |||||||||||||||||||||||| | ||||||||||||||| |||||    
T  38283861 atttagattttgtccctataatttcagattcttccacttttgatccct 38283814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 32998510 - 32998397
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||||||||||  |||| |||| |||||||||||||||||||||| ||||| |||||        | |||||||| ||||||| |||||| | |||| ||    
T  32998510 gggttaataccatttttggtccctgtaatattagcgaattctggtgttagttcctgtaaaaaaaag-tttagattctgtccctgtaatttcagattcctc 32998412  T
Q  489 cacttttggtccctc 503  Q
    ||||||| |||||||    
T  32998411 cacttttagtccctc 32998397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 502
Target Start/End: Original strand, 52552758 - 52552806
Alignment:
Q  454 gatttagattttgtccctataatttaatattcttccacttttggtccct 502  Q
    |||||||||||||||||| |||||| | ||||||||||||||| |||||    
T  52552758 gatttagattttgtccctgtaatttcagattcttccacttttgatccct 52552806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 47575649 - 47575530
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||| ||||||   ||||||| || ||||||||||||||||||||||         | |||||||||||| || |||||| | ||| |||    
T  47575649 gggtaaatacctctattcgtctccgtaatatgagtgaattctggttttagtccctgtaaaaaaaaaaattagattttgtctctgtaatttcagatttttc 47575550  T
Q  489 cacttttggtccctcctttc 508  Q
     |||||||||| ||||||||    
T  47575549 aacttttggtctctcctttc 47575530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 23705038 - 23704924
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||  |||||||||||||||||| |||||||||||||||        |||||||||||||||||| |||||| |||||||||    
T  23705038 gggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 23704939  T
Q  489 cacttttggtccctc 503  Q
    |||||||||||||||    
T  23704938 cacttttggtccctc 23704924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 28218541 - 28218421
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||         |||||||||||||||||| |||||| | ||||||    
T  28218541 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 28218442  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||    
T  28218441 ccacttttggtccctcctttc 28218421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 41600336 - 41600216
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| |||||||||||| |||| |||||||||||||||||| |||||||||||||||         |||||||||||||||||| |||||| | ||||||    
T  41600336 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 41600237  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||    
T  41600236 ccacttttggtccctcctttc 41600216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 394 - 508
Target Start/End: Complemental strand, 1250579 - 1250464
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattcttccact 492  Q
    |||| |||||||||||||||||||||||||||||||  ||||||||| ||||         |||||||||||||||||| |||||| |||||||||||||    
T  1250579 aatatctcttttcgtccttgtaatattagcgaattccagttttagtctctgtaaactaaaagatttagattttgtccctttaatttcatattcttccact 1250480  T
Q  493 tttggtccctcctttc 508  Q
    ||||||||||||||||    
T  1250479 tttggtccctcctttc 1250464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 23704662 - 23704781
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||||| || ||||        |||||| ||||||||||| |||||| | |||||||    
T  23704662 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgtaaaaaaaagatttacattttgtccctgtaatttcagattcttc 23704761  T
Q  489 cacttttggtccctcctttc 508  Q
    ||||||||||||||||||||    
T  23704762 cacttttggtccctcctttc 23704781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 387 - 503
Target Start/End: Original strand, 20419534 - 20419651
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattc 485  Q
    |||||| ||||||||||||||||| | |||||||||||||||| |||||||||||||||         |||||||||||||||||| |||||| ||||||    
T  20419534 ttgggtaaatacctcttttcgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 20419633  T
Q  486 ttccacttttggtccctc 503  Q
    ||||| ||||||||||||    
T  20419634 ttccatttttggtccctc 20419651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 28218178 - 28218294
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt--nnnnnnnngatttagattttgtccctataatttaatattct 486  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||          |||||||||||||||||| |||||| | |||||    
T  28218178 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 28218277  T
Q  487 tccacttttggtccctc 503  Q
    |||||||||||||||||    
T  28218278 tccacttttggtccctc 28218294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 381 - 503
Target Start/End: Original strand, 38879715 - 38879839
Alignment:
Q  381 ttaattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn--gatttagattttgtccctataattt 478  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||   ||||||| |||||          |||||||||||||||||| ||||||    
T  38879715 ttaattttgggtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaattt 38879814  T
Q  479 aatattcttccacttttggtccctc 503  Q
     ||||||||||||||||||||||||    
T  38879815 catattcttccacttttggtccctc 38879839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 12006918 - 12006798
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||| | |||||||||||||||||| | |||||||||||||         |||||||||||||||||| |||||| | ||||||    
T  12006918 gggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 12006819  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||    
T  12006818 ccacttttggtccctcctttc 12006798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 23383878 - 23383758
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||          |||||||||||||||||| |||||| ||||||||    
T  23383878 gggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23383779  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||| ||||||||||||||||    
T  23383778 ccacctttggtccctcctttc 23383758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 382 - 508
Target Start/End: Complemental strand, 20419922 - 20419794
Alignment:
Q  382 taattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt--nnnnnnnngatttagattttgtccctataattta 479  Q
    |||| |||||| |||||||||||| |||| |||||||||| ||||||| |||||||||||||||          |||||||||||||||||| ||||||     
T  20419922 taatattgggtaaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttc 20419823  T
Q  480 atattcttccacttttggtccctcctttc 508  Q
    | ||||||| |||||||||||||||||||    
T  20419822 agattcttctacttttggtccctcctttc 20419794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 48672657 - 48672537
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||  |||||||||||||||||  |||||||||||||||         |||||||||||| ||||| |||||| | ||||||    
T  48672657 gggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattctt 48672558  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||    
T  48672557 ccacttttggtccctcctttc 48672537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 379 - 501
Target Start/End: Original strand, 16995189 - 16995312
Alignment:
Q  379 atttaatt-ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatt 477  Q
    |||||||| |||||| ||||||||||||||||  |||||||||||||||||  ||||||||| |||||         ||||||||||||||||| |||||    
T  16995189 atttaattgttgggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaatatttagattttgtccctgtaatt 16995288  T
Q  478 taatattcttccacttttggtccc 501  Q
    | | ||||||||||||||||||||    
T  16995289 tcagattcttccacttttggtccc 16995312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 10409751 - 10409637
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||| ||| |||||||||||||||||| | |||||||||||||        ||||||||||||||| || |||||| | |||||||    
T  10409751 gggtaaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtctctgtaattttagattcttc 10409652  T
Q  489 cacttttggtccctc 503  Q
    |||||||| ||||||    
T  10409651 cacttttgatccctc 10409637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 12006541 - 12006655
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||| |||||||||||||||||| | |||||||||||||         | ||||||||||||||| |||||| | |||||||    
T  12006541 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaattagattttgtccctgtaatttcagattcttc 12006640  T
Q  489 cacttttggtccctc 503  Q
    |||||||| ||||||    
T  12006641 cacttttgatccctc 12006655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 508
Target Start/End: Complemental strand, 38880100 - 38879982
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    ||||| ||||||||||||||||| |||||||||||| ||||| ||||||||||  | |         ||||||||||||||||| |||||| | ||||||    
T  38880100 tgggtaaatacctcttttcgtccctgtaatattagcaaattccggttttagtc--tttaaaaaaaaaatttagattttgtccctgtaatttcagattctt 38880003  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||    
T  38880002 ccacttttggtccctcctttc 38879982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 388 - 508
Target Start/End: Original strand, 6465854 - 6465974
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    ||||| |||| || ||||||||| |||||||||||||||||| |||||||||||||||         ||||||||| ||| | | |||||| | ||||||    
T  6465854 tgggtaaatatcttttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaatatttagattatgttcttgtaatttcagattctt 6465953  T
Q  488 ccacttttggtccctcctttc 508  Q
    |||||||||||||||||||||    
T  6465954 ccacttttggtccctcctttc 6465974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 389 - 500
Target Start/End: Complemental strand, 20963871 - 20963760
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| |||||||||||| |||| |||||||||||||||||| |||||||||||||||         |||||||||| |||||| |||||| | ||||||     
T  20963871 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaataaaatttagatttagtccctgtaatttcagattcttt 20963772  T
Q  489 cacttttggtcc 500  Q
    ||||||||||||    
T  20963771 cacttttggtcc 20963760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 20458692 - 20458806
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||| | ||||||||| |||||||||| ||||||| |||||||||||||||         |||||||||||||| || |||||| | |||||||    
T  20458692 gggtaaatacattttttcgtccctgtaatattaacgaattccggttttagtccctgtaaataaaaaatttagattttgtcgctgtaatttcagattcttc 20458791  T
Q  489 cacttttggtccctc 503  Q
    |||||||||||||||    
T  20458792 cacttttggtccctc 20458806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 25772364 - 25772478
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||| |||||||||||||||||  | |||||||  ||||        |||||||||||||||| | |||||| |||||||||    
T  25772364 gggtaaatacctcttttcgtccctgtaatattagcgaatttcgattttagtttctgtaaaaaaaagatttagattttgtccttgtaatttcatattcttc 25772463  T
Q  489 cacttttggtccctc 503  Q
    |||||||| ||||||    
T  25772464 cacttttgttccctc 25772478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 25772709 - 25772589
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| |||| |||||||||||| | ||||||||| ||||||  ||||||||||||||         |||||||||||||||||| |||||| | ||||||    
T  25772709 gggtaaatatctcttttcgtccctataatattagtgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 25772610  T
Q  488 ccacttttggtccctcctttc 508  Q
    | |||||||||||||||||||    
T  25772609 ctacttttggtccctcctttc 25772589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 389 - 507
Target Start/End: Complemental strand, 20459068 - 20458950
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn-gatttagattttgtccctataatttaatattctt 487  Q
    |||| ||||||||||||||||| ||||||||||| |||||| ||||| ||| |||||         ||||||||||||||| || |||||| | ||||||    
T  20459068 gggtaaatacctcttttcgtccctgtaatattagggaattccggttt-agtacctgtaaaaaaaaagatttagattttgtcactgtaatttcagattctt 20458970  T
Q  488 ccacttttggtccctccttt 507  Q
    ||||||||||||||||||||    
T  20458969 ccacttttggtccctccttt 20458950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 503
Target Start/End: Original strand, 23383498 - 23383615
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn--gatttagattttgtccctataatttaatattc 485  Q
    ||||| ||||| ||||||||||  ||||||||||| |||||| ||||||||||||| |          ||||||||||||||||||||||||| ||||||    
T  23383498 tgggtaaatacttcttttcgtctctgtaatattagtgaattccggttttagtccctataaaaaaaaaagatttagattttgtccctataatttcatattc 23383597  T
Q  486 ttccacttttggtccctc 503  Q
    ||||| |||| |||||||    
T  23383598 ttccattttttgtccctc 23383615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 24195252 - 24195198
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtcc 441  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| |||||||||    
T  24195252 ttgggtaaatacctcttttcgtccctgtaatattagcgaattctgattttagtcc 24195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 503
Target Start/End: Original strand, 20963494 - 20963610
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnn--gatttagattttgtccctataatttaatattct 486  Q
    |||| |||| || ||||||||| ||||||||||| ||||||| ||||||||||||||          ||||||||||| |||||| |||||| | |||||    
T  20963494 gggtaaatatctattttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaaaagatttagatttagtccctgtaattttagattct 20963593  T
Q  487 tccacttttggtccctc 503  Q
    |||||||||||||||||    
T  20963594 tccacttttggtccctc 20963610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 508
Target Start/End: Complemental strand, 7658338 - 7658227
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccactt 493  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||| ||||         |   ||||||||||||| |||||||| ||||||||||||    
T  7658338 aatacctcttttcgtccctgtaatattaacgaatttcggttttagtctctgtaaaaaaaaaa---agattttgtccctgtaatttaagattcttccactt 7658242  T
Q  494 ttggtccctcctttc 508  Q
    |||||| ||||||||    
T  7658241 ttggtctctcctttc 7658227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 457 - 508
Target Start/End: Complemental strand, 31851548 - 31851497
Alignment:
Q  457 ttagattttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    ||||||||||||||| |||||| |||||||||||||||||||| ||||||||    
T  31851548 ttagattttgtccctgtaatttcatattcttccacttttggtctctcctttc 31851497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 454 - 503
Target Start/End: Complemental strand, 24195108 - 24195059
Alignment:
Q  454 gatttagattttgtccctataatttaatattcttccacttttggtccctc 503  Q
    |||||||||||||||| | |||||| ||||||||||||||||||||||||    
T  24195108 gatttagattttgtccttgtaatttcatattcttccacttttggtccctc 24195059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 7657974 - 7658025
Alignment:
Q  394 aatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||||||||||||||| |||||||||||||||||  ||||||| |||||||    
T  7657974 aatacctcttttcgtccatgtaatattagcgaatttcggttttaatccctgt 7658025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 389 - 440
Target Start/End: Complemental strand, 31852208 - 31852157
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtc 440  Q
    |||||||||||||||||||||| |||||||||| ||||||  ||||||||||    
T  31852208 gggttaatacctcttttcgtccctgtaatattaacgaatttcggttttagtc 31852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 441
Target Start/End: Original strand, 41599956 - 41600010
Alignment:
Q  387 ttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtcc 441  Q
    |||||| ||||||||||||| ||| |||||||||||||||||  |||||||||||    
T  41599956 ttgggtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtcc 41600010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 454 - 503
Target Start/End: Original strand, 44816901 - 44816950
Alignment:
Q  454 gatttagattttgtccctataatttaatattcttccacttttggtccctc 503  Q
    ||||| |||||||||||| |||||| | ||||||||||||||||||||||    
T  44816901 gattttgattttgtccctgtaatttcagattcttccacttttggtccctc 44816950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 459 - 508
Target Start/End: Complemental strand, 44817142 - 44817093
Alignment:
Q  459 agattttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    ||||||||||| |||||||| |||||||| ||||||||||||||| ||||    
T  44817142 agattttgtccttataatttcatattctttcacttttggtccctcttttc 44817093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 14630336 - 14630392
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||||||||||  |||| || |||||||||| ||||||||| |||||||||||||||    
T  14630336 gggttaataccctttttagttcttgtaatatgagcgaattccggttttagtccctgt 14630392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 14647028 - 14646972
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||||||||||  |||| |||| |||||||| ||||||||| |||||||||||||||    
T  14647028 gggttaataccctttttagtccctgtaatatgagcgaattccggttttagtccctgt 14646972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 48672277 - 48672333
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||| ||||||||||||||||| ||||||||||| |||||  |||||||||| ||||    
T  48672277 gggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtctctgt 48672333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 445
Target Start/End: Complemental strand, 23258301 - 23258246
Alignment:
Q  390 ggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||||||| ||||||| |||  |||||||||||||||||| |||||| ||||||||    
T  23258301 ggttaatatctcttttggtctctgtaatattagcgaattccggttttggtccctgt 23258246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 428
Target Start/End: Original strand, 23274921 - 23274964
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaatt 428  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||    
T  23274921 ttttgggttaataccccttttggtccttgtaatatgagcgaatt 23274964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 445
Target Start/End: Original strand, 33131623 - 33131689
Alignment:
Q  380 tttaatttt-gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    ||||||||| ||||||||||| | ||| |||| |||||||| ||||| ||| |||||||||||||||    
T  33131623 tttaattttagggttaataccccctttggtccctgtaatatgagcgatttccggttttagtccctgt 33131689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 508
Target Start/End: Complemental strand, 48648541 - 48648487
Alignment:
Q  454 gatttagattttgtccctataatttaatattcttccacttttggtccctcctttc 508  Q
    |||||||||||||||  | |||||| | |||||||||||| ||||||||||||||    
T  48648541 gatttagattttgtctatgtaattttagattcttccacttctggtccctcctttc 48648487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 445
Target Start/End: Original strand, 7842467 - 7842496
Alignment:
Q  416 atattagcgaattctggttttagtccctgt 445  Q
    ||||||||||||||||||||||||||||||    
T  7842467 atattagcgaattctggttttagtccctgt 7842496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 441
Target Start/End: Complemental strand, 33162914 - 33162862
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtcc 441  Q
    |||| ||||||||||||||||  |||||||||||||||||   ||||||||||    
T  33162914 gggtaaatacctcttttcgtctctgtaatattagcgaatttctgttttagtcc 33162862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 41600025 - 41600073
Alignment:
Q  455 atttagattttgtccctataatttaatattcttccacttttggtccctc 503  Q
    ||||||||||||||||| |||||| | |||||||||| |||| ||||||    
T  41600025 atttagattttgtccctgtaatttcagattcttccacatttgatccctc 41600073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 385 - 503
Target Start/End: Original strand, 7222 - 7341
Alignment:
Q  385 ttttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatat 483  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||         |||||||||||||||||| |||||| ||||    
T  7222 tttttggtaaatacctcttttcgtccttgtaatattagcgaattctggtgttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatat 7321  T
Q  484 tcttccacttttggtccctc 503  Q
    ||||||||||| ||||||||    
T  7322 tcttccactttcggtccctc 7341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 7578 - 7457
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt--nnnnnnnngatttagattttgtccctataatttaatattct 486  Q
    |||| ||||||| ||||||||| |||||||||||||||||| |||||||||||||||          |||||||||||||||||| |||||| | |||||    
T  7578 gggtaaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 7479  T
Q  487 tccacttttggtccctcctttc 508  Q
    || ||||||||||  |||||||    
T  7478 tctacttttggtctatcctttc 7457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 59; Significance: 9e-25; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 389 - 503
Target Start/End: Complemental strand, 4940 - 4826
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| ||||||||||||||||| |||||||||||| ||||| ||||||| |||||||        |||||||||||||||| | |||||| |||||||||    
T  4940 gggtaaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgtaaaaataagatttagattttgtccttgtaatttcatattcttc 4841  T
Q  489 cacttttggtccctc 503  Q
    |||||||||||||||    
T  4840 cacttttggtccctc 4826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 389 - 507
Target Start/End: Original strand, 4562 - 4682
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt--nnnnnnnngatttagattttgtccctataatttaatattct 486  Q
    |||| |||||||||||||||||||||||||||||||||||| | |||||||||||||          |||||| ||||||||||| |||||| | |||||    
T  4562 gggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttgagattct 4661  T
Q  487 tccacttttggtccctccttt 507  Q
    || ||||||||||||||||||    
T  4662 tctacttttggtccctccttt 4682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 392 - 508
Target Start/End: Complemental strand, 12357 - 12240
Alignment:
Q  392 ttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattcttcca 490  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |         |||||||||||||||||| |||||| | |||||||||    
T  12357 ttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 12258  T
Q  491 cttttggtccctcctttc 508  Q
    |||||||||| |||||||    
T  12257 cttttggtccatcctttc 12240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 1411 - 1530
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| |||||||||||||| ||  |||||||| |||||||  | |||||||||||||        |||||||||| ||||||| |||||| | |||||||    
T  1411 gggtaaatacctcttttcgacccggtaatatttgcgaatttcgattttagtccctgtaaaaaaaagatttagattatgtccctgtaatttcagattcttc 1510  T
Q  489 cacttttggtccctcctttc 508  Q
    ||||||||||||||||||||    
T  1511 cacttttggtccctcctttc 1530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 1784 - 1730
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccct 443  Q
    |||| ||| ||||||||||||| |||||||||| ||||||| |||||||||||||    
T  1784 gggtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtccct 1730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 3869 - 3989
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt-nnnnnnnngatttagattttgtccctataatttaatattctt 487  Q
    |||| |||| |||||||||||| |||||||||||||||||| |||||||||||||||         |||||||||| ||||||| |||||| | ||||||    
T  3869 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattatgtccctgtaatttcaaattctt 3968  T
Q  488 ccacttttggtccctcctttc 508  Q
    ||||| |||||| ||| ||||    
T  3969 ccactgttggtcgctcatttc 3989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 16006 - 15890
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttc 488  Q
    |||| |||| |||||||||||| |||||||||||||||||| |||||||||| ||||         |   ||||||||||||| |||||| ||||||||     
T  16006 gggtaaatatctcttttcgtccatgtaatattagcgaattccggttttagtctctgtaaaaaaaaaa---agattttgtccctgtaatttcatattcttt 15910  T
Q  489 cacttttggtccctcctttc 508  Q
    ||||||||||| ||||||||    
T  15909 cacttttggtctctcctttc 15890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 401 - 503
Target Start/End: Complemental strand, 5113 - 5011
Alignment:
Q  401 cttttcgtccttgtaatattagcgaattctggttttagtccctgtnnnnnnnngatttagattttgtccctataatttaatattcttccacttttggtcc 500  Q
    |||||||||| |||||||||||||||||| |||||| ||||  ||         |||||||||| |||||| |||||| | |||||||||||||||||||    
T  5113 cttttcgtccatgtaatattagcgaattccggtttttgtcctagtaaaaaaaatatttagatttagtccctgtaattttagattcttccacttttggtcc 5014  T
Q  501 ctc 503  Q
    |||    
T  5013 ctc 5011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 441
Target Start/End: Original strand, 4869 - 4932
Alignment:
Q  378 aatttaattttgggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtcc 441  Q
    |||||| ||| |||| |||||||||||| || | |||||||||||||||||  |||||||||||    
T  4869 aatttattttagggtaaatacctctttttgttcctgtaatattagcgaatttcggttttagtcc 4932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 8325 - 8378
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccc 442  Q
    |||| ||||||||||||||||| |||||||||||||||||  ||||||||||||    
T  8325 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccc 8378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 454 - 503
Target Start/End: Complemental strand, 8634 - 8585
Alignment:
Q  454 gatttagattttgtccctataatttaatattcttccacttttggtccctc 503  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  8634 gatttagattttgtccctgtaattttagattcttccacttttggtccctc 8585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 454 - 503
Target Start/End: Original strand, 286 - 335
Alignment:
Q  454 gatttagattttgtccctataatttaatattcttccacttttggtccctc 503  Q
    |||||||||||| |||| ||||||| | ||||||||||||||||||||||    
T  286 gatttagattttctccccataatttcagattcttccacttttggtccctc 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 428
Target Start/End: Complemental strand, 5913 - 5873
Alignment:
Q  388 tgggttaatacctcttttcgtccttgtaatattagcgaatt 428  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  5913 tgggttaatacctcttttggtccatgtaatattagcgaatt 5873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 6057 - 6001
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 445  Q
    |||| |||||||||||| |||| || ||||||||||||||| | |||||||||||||    
T  6057 gggtaaatacctcttttggtccctgcaatattagcgaattccgattttagtccctgt 6001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 4667 - 4721
Alignment:
Q  389 gggttaatacctcttttcgtccttgtaatattagcgaattctggttttagtccct 443  Q
    |||| |||||||||||| |||| || |||||||||||||||  ||||||||||||    
T  4667 gggtaaatacctcttttagtccctgcaatattagcgaattccagttttagtccct 4721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University