View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0941_low_59 (Length: 314)
Name: NF0941_low_59
Description: NF0941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0941_low_59 |
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Alignment Details
Target: chr5 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 94 - 238
Target Start/End: Complemental strand, 7059469 - 7059325
Alignment:
| Q |
94 |
ccccaaaaaagatctgatatcaatgcagctgaaaacgacccttcactagttgcaatcaatagacagcaagacttctcagaaaaccaagcaatgcaatcca |
193 |
Q |
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| T |
7059469 |
ccccaaaaaagatctgatatcaatgcagctgaaaacgacccttcactagttgcaatcaatagacagcaagacttctcagaaaaccaagcaatgcaatcca |
7059370 |
T |
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| Q |
194 |
caaccaccataaacaccaccgtctctgaggtggtggttccaccct |
238 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7059369 |
caaccaccataaacaccaccgtctctgaggtggtggttccaccct |
7059325 |
T |
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