View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0941_low_65 (Length: 305)

Name: NF0941_low_65
Description: NF0941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0941_low_65
NF0941_low_65
[»] chr5 (44 HSPs)
chr5 (1-205)||(43592171-43592375)
chr5 (1-205)||(27449706-27449910)
chr5 (1-205)||(43598616-43598820)
chr5 (1-205)||(43604108-43604312)
chr5 (1-205)||(43609600-43609804)
chr5 (1-205)||(27444862-27445066)
chr5 (1-210)||(15044579-15044787)
chr5 (1-205)||(1457151-1457354)
chr5 (7-205)||(30631305-30631502)
chr5 (1-210)||(37556606-37556816)
chr5 (1-210)||(37561428-37561638)
chr5 (32-205)||(31180138-31180310)
chr5 (1-210)||(28807557-28807767)
chr5 (1-210)||(2785268-2785477)
chr5 (1-210)||(33791209-33791418)
chr5 (1-210)||(31401833-31402042)
chr5 (1-210)||(33768072-33768281)
chr5 (1-210)||(31396976-31397185)
chr5 (7-205)||(38192073-38192270)
chr5 (7-205)||(38219298-38219495)
chr5 (1-205)||(24135744-24135945)
chr5 (88-205)||(35387640-35387759)
chr5 (110-205)||(9353332-9353429)
chr5 (110-205)||(36932350-36932447)
chr5 (110-205)||(10281751-10281849)
chr5 (110-205)||(15464532-15464629)
chr5 (111-205)||(11916971-11917068)
chr5 (110-205)||(14520230-14520327)
chr5 (110-178)||(17003988-17004057)
chr5 (110-205)||(3880299-3880397)
chr5 (113-205)||(12084175-12084269)
chr5 (110-205)||(19588746-19588844)
chr5 (110-205)||(28832259-28832356)
chr5 (110-205)||(42127410-42127507)
chr5 (114-173)||(4410241-4410301)
chr5 (114-173)||(15552464-15552524)
chr5 (114-173)||(31179371-31179431)
chr5 (110-173)||(31300629-31300693)
chr5 (114-173)||(31542953-31543013)
chr5 (114-173)||(31545299-31545359)
chr5 (114-167)||(27910675-27910729)
chr5 (114-173)||(3373137-3373197)
chr5 (114-173)||(10749919-10749979)
chr5 (114-173)||(15354575-15354635)
[»] chr4 (37 HSPs)
chr4 (1-205)||(9224396-9224599)
chr4 (1-205)||(9229183-9229386)
chr4 (1-205)||(51520349-51520553)
chr4 (1-205)||(56146700-56146904)
chr4 (2-210)||(45357280-45357488)
chr4 (2-204)||(45347807-45348009)
chr4 (7-205)||(24741839-24742037)
chr4 (1-210)||(18855619-18855827)
chr4 (7-205)||(29760541-29760738)
chr4 (1-210)||(3813916-3814125)
chr4 (1-210)||(5732554-5732766)
chr4 (88-192)||(28468542-28468647)
chr4 (88-205)||(31985634-31985752)
chr4 (110-205)||(10047379-10047477)
chr4 (110-205)||(39245994-39246092)
chr4 (110-205)||(36315229-36315326)
chr4 (110-205)||(36329438-36329535)
chr4 (110-195)||(38152449-38152536)
chr4 (110-205)||(16623292-16623390)
chr4 (110-205)||(5396671-5396768)
chr4 (110-205)||(3796518-3796616)
chr4 (111-194)||(5143260-5143345)
chr4 (110-192)||(5269204-5269288)
chr4 (110-195)||(24333809-24333896)
chr4 (111-194)||(5147678-5147763)
chr4 (111-205)||(3777550-3777646)
chr4 (115-195)||(6743425-6743507)
chr4 (114-205)||(16630679-16630773)
chr4 (114-173)||(16931789-16931849)
chr4 (114-173)||(16934143-16934203)
chr4 (114-173)||(22780373-22780433)
chr4 (114-173)||(44599838-44599898)
chr4 (131-173)||(39774338-39774380)
chr4 (114-173)||(6765117-6765177)
chr4 (114-173)||(7941596-7941656)
chr4 (114-173)||(18709164-18709224)
chr4 (114-173)||(22782738-22782798)
[»] chr3 (53 HSPs)
chr3 (1-205)||(22173184-22173387)
chr3 (7-205)||(7167143-7167341)
chr3 (7-205)||(28503865-28504053)
chr3 (1-205)||(2671586-2671790)
chr3 (43-205)||(8739063-8739224)
chr3 (43-205)||(9091301-9091462)
chr3 (1-210)||(18656324-18656536)
chr3 (1-210)||(2672914-2673124)
chr3 (1-210)||(2677070-2677280)
chr3 (1-210)||(8512108-8512319)
chr3 (1-210)||(8516988-8517199)
chr3 (50-205)||(40372795-40372949)
chr3 (1-210)||(24968000-24968209)
chr3 (7-205)||(8477263-8477459)
chr3 (10-210)||(32475387-32475585)
chr3 (10-210)||(32480245-32480443)
chr3 (110-205)||(26928591-26928687)
chr3 (88-205)||(1305927-1306045)
chr3 (1-158)||(10207826-10207983)
chr3 (88-205)||(32143299-32143418)
chr3 (110-205)||(8370476-8370573)
chr3 (110-205)||(27974942-27975039)
chr3 (110-205)||(18552872-18552970)
chr3 (110-205)||(16264350-16264447)
chr3 (110-205)||(21711223-21711320)
chr3 (110-205)||(27452958-27453055)
chr3 (111-205)||(36029094-36029191)
chr3 (110-192)||(27986449-27986533)
chr3 (113-205)||(1736294-1736389)
chr3 (110-205)||(30709779-30709877)
chr3 (110-192)||(33386669-33386753)
chr3 (110-205)||(3715991-3716089)
chr3 (110-205)||(40592771-40592869)
chr3 (110-205)||(48438214-48438312)
chr3 (110-205)||(6794703-6794800)
chr3 (153-205)||(28501698-28501750)
chr3 (110-171)||(25795781-25795843)
chr3 (110-205)||(26298988-26299086)
chr3 (110-173)||(1417513-1417577)
chr3 (110-205)||(47923895-47923993)
chr3 (110-205)||(37466291-37466388)
chr3 (110-192)||(39039995-39040079)
chr3 (110-176)||(4386947-4387014)
chr3 (110-205)||(40844652-40844749)
chr3 (110-205)||(3328346-3328443)
chr3 (114-173)||(38210569-38210629)
chr3 (114-173)||(50494198-50494258)
chr3 (114-177)||(53894055-53894119)
chr3 (110-205)||(24695153-24695251)
chr3 (114-173)||(458483-458543)
chr3 (114-173)||(6063444-6063504)
chr3 (114-173)||(10621528-10621588)
chr3 (110-157)||(39153357-39153405)
[»] chr8 (33 HSPs)
chr8 (8-205)||(7289915-7290112)
chr8 (1-205)||(6311190-6311393)
chr8 (1-210)||(39784807-39785016)
chr8 (1-210)||(25328262-25328470)
chr8 (7-205)||(33037807-33038005)
chr8 (7-205)||(36979276-36979474)
chr8 (7-205)||(4760075-4760274)
chr8 (7-205)||(30655542-30655743)
chr8 (7-205)||(10689143-10689341)
chr8 (1-205)||(18853167-18853372)
chr8 (1-210)||(35745284-35745493)
chr8 (1-205)||(18870561-18870763)
chr8 (10-210)||(10684247-10684447)
chr8 (7-205)||(1261954-1262148)
chr8 (88-192)||(26287879-26287985)
chr8 (88-192)||(26301136-26301242)
chr8 (88-192)||(26313130-26313236)
chr8 (88-205)||(31071229-31071349)
chr8 (110-195)||(26403240-26403327)
chr8 (110-205)||(4456028-4456125)
chr8 (75-205)||(7412305-7412438)
chr8 (110-205)||(19175754-19175851)
chr8 (112-173)||(9765852-9765914)
chr8 (110-205)||(23799576-23799674)
chr8 (110-178)||(4696624-4696693)
chr8 (113-205)||(6127224-6127319)
chr8 (110-205)||(5702482-5702580)
chr8 (110-205)||(19752394-19752491)
chr8 (114-173)||(43079877-43079937)
chr8 (114-173)||(43082248-43082308)
chr8 (110-176)||(6813683-6813750)
chr8 (140-173)||(18810982-18811015)
chr8 (114-173)||(44721118-44721178)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-205)||(35051-35254)
[»] chr6 (36 HSPs)
chr6 (1-205)||(22010686-22010889)
chr6 (1-210)||(14737560-14737769)
chr6 (1-205)||(11856864-11857070)
chr6 (9-210)||(14742420-14742620)
chr6 (1-202)||(28184397-28184598)
chr6 (1-210)||(6438393-6438601)
chr6 (2-206)||(28155557-28155762)
chr6 (1-210)||(6005310-6005519)
chr6 (2-210)||(16838638-16838846)
chr6 (1-210)||(33330428-33330639)
chr6 (8-210)||(33335925-33336129)
chr6 (7-205)||(5674770-5674966)
chr6 (110-205)||(5757478-5757575)
chr6 (110-205)||(21356036-21356133)
chr6 (1-155)||(5343373-5343527)
chr6 (110-205)||(5572240-5572338)
chr6 (110-194)||(10077176-10077262)
chr6 (110-205)||(31086472-31086570)
chr6 (110-194)||(4629954-4630040)
chr6 (110-205)||(31979513-31979611)
chr6 (1-61)||(30125937-30125998)
chr6 (88-192)||(22708996-22709102)
chr6 (122-205)||(21801343-21801429)
chr6 (110-205)||(22963700-22963797)
chr6 (110-205)||(23824596-23824693)
chr6 (131-205)||(18232867-18232943)
chr6 (110-173)||(31936587-31936651)
chr6 (110-192)||(5017482-5017566)
chr6 (114-173)||(12195515-12195575)
chr6 (101-173)||(5273203-5273276)
chr6 (114-173)||(4816231-4816291)
chr6 (114-173)||(19704567-19704627)
chr6 (114-173)||(20915356-20915416)
chr6 (114-173)||(26932562-26932622)
chr6 (114-173)||(29754709-29754769)
chr6 (114-173)||(33309110-33309170)
[»] chr2 (44 HSPs)
chr2 (1-205)||(44312613-44312816)
chr2 (1-210)||(39811972-39812180)
chr2 (7-205)||(11098927-11099125)
chr2 (1-210)||(32246677-32246889)
chr2 (1-205)||(14291381-14291585)
chr2 (1-205)||(9296401-9296605)
chr2 (1-210)||(19344313-19344523)
chr2 (1-210)||(19349171-19349381)
chr2 (7-205)||(25398395-25398592)
chr2 (7-205)||(25403533-25403730)
chr2 (88-205)||(3491729-3491847)
chr2 (110-195)||(8040060-8040147)
chr2 (88-192)||(40738822-40738926)
chr2 (113-205)||(13569331-13569426)
chr2 (110-205)||(21629944-21630041)
chr2 (110-205)||(28259177-28259274)
chr2 (110-205)||(10445443-10445541)
chr2 (110-205)||(17865203-17865301)
chr2 (110-205)||(20522220-20522318)
chr2 (110-205)||(34682333-34682431)
chr2 (111-205)||(34388859-34388956)
chr2 (110-205)||(14699007-14699104)
chr2 (140-205)||(25407653-25407719)
chr2 (111-205)||(10707251-10707348)
chr2 (113-205)||(8390149-8390244)
chr2 (110-195)||(31056044-31056131)
chr2 (110-205)||(33528620-33528718)
chr2 (110-205)||(39482931-39483029)
chr2 (110-205)||(23078470-23078567)
chr2 (110-205)||(42039669-42039766)
chr2 (110-195)||(16940219-16940306)
chr2 (110-195)||(17010884-17010971)
chr2 (100-173)||(2838063-2838136)
chr2 (110-194)||(33118136-33118222)
chr2 (113-173)||(1345574-1345635)
chr2 (110-178)||(36757790-36757859)
chr2 (114-173)||(35215586-35215646)
chr2 (114-173)||(35217963-35218023)
chr2 (131-173)||(27149327-27149369)
chr2 (113-173)||(2869726-2869787)
chr2 (114-170)||(45332181-45332238)
chr2 (114-173)||(23452237-23452297)
chr2 (114-173)||(36558864-36558924)
chr2 (114-173)||(36561141-36561201)
[»] chr7 (48 HSPs)
chr7 (1-205)||(12396804-12397007)
chr7 (1-205)||(12406224-12406427)
chr7 (1-199)||(4866622-4866820)
chr7 (1-210)||(31109567-31109775)
chr7 (1-205)||(20357548-20357751)
chr7 (9-210)||(19992213-19992414)
chr7 (1-205)||(2057852-2058062)
chr7 (1-210)||(24024310-24024520)
chr7 (1-210)||(21812223-21812431)
chr7 (10-210)||(24261306-24261506)
chr7 (10-210)||(24266185-24266385)
chr7 (10-210)||(16879975-16880174)
chr7 (10-210)||(16884831-16885030)
chr7 (7-205)||(21639710-21639905)
chr7 (7-205)||(1533444-1533640)
chr7 (7-205)||(18408666-18408860)
chr7 (7-205)||(21645908-21646103)
chr7 (110-205)||(18413641-18413736)
chr7 (110-205)||(29159803-29159901)
chr7 (111-194)||(21983285-21983370)
chr7 (110-205)||(46516309-46516407)
chr7 (110-205)||(49091661-49091759)
chr7 (110-205)||(44848684-44848781)
chr7 (110-205)||(2647695-2647793)
chr7 (110-205)||(33332449-33332547)
chr7 (110-205)||(9190008-9190105)
chr7 (110-205)||(20284089-20284186)
chr7 (110-205)||(55948-56045)
chr7 (110-205)||(2580390-2580487)
chr7 (113-173)||(28617258-28617319)
chr7 (110-193)||(35960816-35960901)
chr7 (110-173)||(9185198-9185262)
chr7 (110-205)||(4796666-4796764)
chr7 (110-178)||(47263678-47263745)
chr7 (110-193)||(2479337-2479421)
chr7 (114-173)||(31155911-31155971)
chr7 (111-194)||(21988909-21988992)
chr7 (114-173)||(1049296-1049356)
chr7 (114-173)||(2935497-2935557)
chr7 (114-173)||(3035953-3036013)
chr7 (110-173)||(5817303-5817366)
chr7 (114-173)||(7351652-7351712)
chr7 (110-157)||(8153466-8153514)
chr7 (114-173)||(9027194-9027254)
chr7 (114-173)||(22108295-22108355)
chr7 (114-173)||(22137306-22137366)
chr7 (114-173)||(40550055-40550115)
chr7 (114-173)||(40552333-40552393)
[»] chr1 (34 HSPs)
chr1 (7-210)||(41398139-41398337)
chr1 (1-210)||(39445392-39445600)
chr1 (8-210)||(41390485-41390682)
chr1 (7-205)||(24787365-24787560)
chr1 (1-210)||(25445073-25445282)
chr1 (1-210)||(44023858-44024065)
chr1 (9-210)||(1054996-1055196)
chr1 (1-205)||(24202769-24202969)
chr1 (1-210)||(43988447-43988658)
chr1 (74-205)||(19361432-19361564)
chr1 (74-205)||(19380072-19380204)
chr1 (74-205)||(19358843-19358975)
chr1 (110-205)||(26644897-26644994)
chr1 (110-195)||(47703946-47704033)
chr1 (110-205)||(19072928-19073026)
chr1 (110-205)||(19120818-19120916)
chr1 (110-205)||(16124515-16124613)
chr1 (110-205)||(27104371-27104469)
chr1 (110-205)||(3281708-3281805)
chr1 (110-195)||(9476261-9476348)
chr1 (110-195)||(13598398-13598485)
chr1 (110-195)||(29651811-29651898)
chr1 (110-202)||(37069770-37069864)
chr1 (110-195)||(775672-775759)
chr1 (75-205)||(21536569-21536702)
chr1 (110-205)||(13604623-13604720)
chr1 (110-205)||(47098824-47098921)
chr1 (110-205)||(32889439-32889536)
chr1 (113-173)||(47102874-47102935)
chr1 (114-173)||(9459419-9459479)
chr1 (114-173)||(9463246-9463306)
chr1 (114-173)||(16226386-16226446)
chr1 (114-173)||(23786058-23786118)
chr1 (114-173)||(51752582-51752642)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-210)||(255-463)
[»] scaffold0355 (2 HSPs)
scaffold0355 (8-210)||(9626-9825)
scaffold0355 (8-83)||(1-72)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-210)||(2234-2443)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-210)||(148939-149148)
[»] scaffold0197 (2 HSPs)
scaffold0197 (1-210)||(19148-19357)
scaffold0197 (10-210)||(14292-14492)
[»] scaffold0188 (2 HSPs)
scaffold0188 (7-205)||(17952-18148)
scaffold0188 (7-205)||(24045-24241)
[»] scaffold0009 (1 HSPs)
scaffold0009 (10-185)||(181973-182147)
[»] scaffold0978 (1 HSPs)
scaffold0978 (7-142)||(300-432)
[»] scaffold0140 (3 HSPs)
scaffold0140 (110-205)||(8419-8516)
scaffold0140 (114-173)||(22343-22403)
scaffold0140 (114-173)||(24618-24678)
[»] scaffold0036 (1 HSPs)
scaffold0036 (111-205)||(85684-85780)
[»] scaffold0087 (2 HSPs)
scaffold0087 (110-205)||(43961-44058)
scaffold0087 (75-205)||(36832-36965)
[»] scaffold0006 (3 HSPs)
scaffold0006 (110-195)||(5683-5770)
scaffold0006 (110-195)||(2492-2579)
scaffold0006 (110-205)||(133280-133377)
[»] scaffold0148 (1 HSPs)
scaffold0148 (110-205)||(10729-10827)
[»] scaffold0098 (1 HSPs)
scaffold0098 (110-178)||(45253-45322)
[»] scaffold0267 (1 HSPs)
scaffold0267 (114-173)||(269-329)
[»] scaffold0176 (1 HSPs)
scaffold0176 (113-205)||(17266-17361)
[»] scaffold0154 (1 HSPs)
scaffold0154 (140-173)||(11500-11533)
[»] scaffold0025 (1 HSPs)
scaffold0025 (114-173)||(69292-69352)


Alignment Details
Target: chr5 (Bit Score: 181; Significance: 8e-98; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 43592171 - 43592375
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  43592171 ccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaa 43592270  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  43592271 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 43592370  T
Q  201 aagaa 205  Q
    |||||    
T  43592371 aagaa 43592375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 27449706 - 27449910
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  27449706 ccaagcaaacaacaacatagcagccctagactagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaa 27449805  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  27449806 aacaccgagaagattgttgacccagttcagccaatatagcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 27449905  T
Q  201 aagaa 205  Q
    |||||    
T  27449906 aagaa 27449910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 43598616 - 43598820
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  43598616 ccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaa 43598715  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  43598716 aacaccgagaagattgttggtccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 43598815  T
Q  201 aagaa 205  Q
    |||||    
T  43598816 aagaa 43598820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 43604108 - 43604312
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  43604108 ccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaa 43604207  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  43604208 aacaccgagaagattgttggtccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 43604307  T
Q  201 aagaa 205  Q
    |||||    
T  43604308 aagaa 43604312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 43609600 - 43609804
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  43609600 ccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaa 43609699  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  43609700 aacaccgagaagattgttggtccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 43609799  T
Q  201 aagaa 205  Q
    |||||    
T  43609800 aagaa 43609804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 27444862 - 27445066
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  27444862 ccaagcaaacaacaacatagcagccctagactagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaa 27444961  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  27444962 aacaccgagaagattgttgacccagttcaggcaatatagcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 27445061  T
Q  201 aagaa 205  Q
    |||||    
T  27445062 aagaa 27445066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 15044579 - 15044787
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||    
T  15044579 ccaaaccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaa-gagattccaaagcataaacaagataagcaagaaaaggaagaacaa 15044677  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  15044678 aacaccaagaagattgttgacccagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 15044777  T
Q  201 aagaatctag 210  Q
    |||| |||||    
T  15044778 aagactctag 15044787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 1457354 - 1457151
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  | ||| ||||||||||    
T  1457354 ccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagaaagaaa-ggaagaacaa 1457256  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  1457255 aacaccgagaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 1457156  T
Q  201 aagaa 205  Q
    |||||    
T  1457155 aagaa 1457151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 30631305 - 30631502
Alignment:
Q  7 caacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacacc 106  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | | ||||| ||||||||||||||||||||  | ||| ||||||||||||||||    
T  30631305 caacaacaacaaaacagccctagactagtgtatagcaaaatcacatatatagataacaaagcataaacaagataagtaagaaa-ggaagaacaaaacacc 30631403  T
Q  107 gagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 205  Q
     |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  30631404 aagaagattgttgactcagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaa 30631502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 37556816 - 37556606
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaaca 99  Q
    |||||| ||||||||||||||||||   |||| ||||||||||||||||||| ||||| || ||| ||||||||||||||| || |||| |||| |||||    
T  37556816 ccaagctaacaacaacaaaacagcctatgacttgtgtatagcaaaaccacactaagagctaacaa-gcataaacaagataaacggtaaatggaaagaaca 37556718  T
Q  100 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtt 198  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37556717 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggtt 37556618  T
Q  199 acaagaatctag 210  Q
    ||||| ||||||    
T  37556617 acaagtatctag 37556606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 37561638 - 37561428
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaaca 99  Q
    |||||| ||||||||||||||||||   |||| ||||||||||||||||||| ||||| || ||| ||||||||||||||| || |||| |||| |||||    
T  37561638 ccaagctaacaacaacaaaacagcctatgacttgtgtatagcaaaaccacactaagagctaacaa-gcataaacaagataaacggtaaatggaaagaaca 37561540  T
Q  100 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtt 198  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37561539 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggtt 37561440  T
Q  199 acaagaatctag 210  Q
    ||||| ||||||    
T  37561439 acaagtatctag 37561428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 32 - 205
Target Start/End: Original strand, 31180138 - 31180310
Alignment:
Q  32 tagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagc 131  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||  | ||| | |||||||||||||| ||||||||||||||||||||||||    
T  31180138 tagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagaaagaaa-gaaagaacaaaacaccaagaagattgttgacccagttcagc 31180236  T
Q  132 caatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  31180237 caatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaa 31180310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 28807767 - 28807557
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaa--ccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaa 97  Q
    |||||| |||||||||||| ||||||||  ||||||||||||||||  |||| ||||||| || ||| ||||||||||||||| || ||||||||| |||    
T  28807767 ccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaaaccactcaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaa 28807670  T
Q  98 caaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagg 196  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28807669 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaagg 28807571  T
Q  197 ttacaagaatctag 210  Q
    ||||||||||||||    
T  28807570 ttacaagaatctag 28807557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 2785268 - 2785477
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaac 98  Q
    |||||| ||||||||||||||||||  || ||| |||||||||||||||||| ||||| || ||| |||||  |||||||| ||||||||||||  ||||    
T  2785268 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaaggaaaagaac 2785364  T
Q  99 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-g 196  Q
    ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2785365 aaa-caccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagag 2785463  T
Q  197 ttacaagaatctag 210  Q
    ||||||||||||||    
T  2785464 ttacaagaatctag 2785477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 33791209 - 33791418
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaac 98  Q
    |||||| ||||||||||||||||||  || ||| ||||||||||||||||| | |||| || ||| |||||  |||||||| ||||||||||||  ||||    
T  33791209 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacatatagagctaacaa-gcata--caagataaacgataaaaggaaaagaac 33791305  T
Q  99 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-g 196  Q
    ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  33791306 aaa-caccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggaaagagcagctctccaatccaatatgtgaatgtgttacaaaagag 33791404  T
Q  197 ttacaagaatctag 210  Q
    ||||||||||||||    
T  33791405 ttacaagaatctag 33791418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 31402042 - 31401833
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaac 98  Q
    |||||| ||||||||||||||||||  || ||| |||| ||||||||||||| ||||| || ||| |||||  |||||||| ||||||||| ||  ||||    
T  31402042 ccaagctaacaacaacaaaacagcctaagcctaatgtaaagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaac 31401946  T
Q  99 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-g 196  Q
    ||| ||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  31401945 aaa-caccgagcaagattgttgacccagttcagccaatgtggcctaatatgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagag 31401847  T
Q  197 ttacaagaatctag 210  Q
    ||||||||||||||    
T  31401846 ttacaagaatctag 31401833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 33768072 - 33768281
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaac 98  Q
    |||||| ||||||||||||||||||  || ||| ||||||||||||||||| | |||| || ||| |||||  || ||||| ||||||||||||  ||||    
T  33768072 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacatatagagctaacaa-gcata--caggataaacgataaaaggaaaagaac 33768168  T
Q  99 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-g 196  Q
    ||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  33768169 aaa-caccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggggagagcagctctccaatccaatatgtgaatgtgttacaaaagag 33768267  T
Q  197 ttacaagaatctag 210  Q
    ||||||||||||||    
T  33768268 ttacaagaatctag 33768281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 31397185 - 31396976
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaaca- 99  Q
    |||||| ||||||||||||||| ||  || ||| |||| ||||||||||||| ||||| || ||| |||||  |||||||| ||||||||| ||  | |     
T  31397185 ccaagctaacaacaacaaaacatcctaagcctaatgtaaagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacaaac 31397089  T
Q  100 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-gt 197  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  31397088 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagt 31396989  T
Q  198 tacaagaatctag 210  Q
    |||||||||||||    
T  31396988 tacaagaatctag 31396976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 38192073 - 38192270
Alignment:
Q  7 caacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaa-aca 104  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||||||| ||||   |||||||  |||||||||||| | ||| ||||||||||| |||    
T  38192073 caacaacaacaaaaacagccctagactagtgtagagcaacaccacacaa-gagaatacaaagca--aacaagataagcaagaaa-ggaagaacaaacaca 38192168  T
Q  105 ccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaag 203  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||||||    
T  38192169 ccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaag 38192268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 38219298 - 38219495
Alignment:
Q  7 caacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaa-aca 104  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||||||| ||||   |||||||  |||||||||||| | ||| ||||||||||| |||    
T  38219298 caacaacaacaaaaacagccctagactagtgtagagcaacaccacacaa-gagaatacaaagca--aacaagataagcaagaaa-ggaagaacaaacaca 38219393  T
Q  105 ccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaag 203  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||||||    
T  38219394 ccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaag 38219493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 24135744 - 24135945
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| ||||||   ||| |   |||||||  |||||||||||| | ||||||||||||||    
T  24135744 ccaagcaaacaacaacaaaacagccctagactagtgtagagcaacaccaca---agataatacaaagca--aacaagataagctagaaaaggaagaacaa 24135838  T
Q  101 a-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggtt 198  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || || | |||| |||||||||| ||||    
T  24135839 acacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctatccaatgcactaagatgaaagtgttacaaagggtt 24135938  T
Q  199 acaagaa 205  Q
    |||||||    
T  24135939 acaagaa 24135945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 35387640 - 35387759
Alignment:
Q  88 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgt 185  Q
    |||||||||||||| ||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| ||    
T  35387640 aaaggaagaacaaacacaccaaaaagattgttgacccaattcagccaatatggcctaatctgggggagagagcagctctccaatctactatgatgaaagt 35387739  T
Q  186 gttacaaaaggttacaagaa 205  Q
    |||||||| |||||||||||    
T  35387740 gttacaaagggttacaagaa 35387759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 9353429 - 9353332
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  9353429 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 9353332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 36932447 - 36932350
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  36932447 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 36932350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 10281751 - 10281849
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| ||| |||||||||||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  10281751 aagattgttgacccagttcggtccaatatgacctgatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 10281849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 15464532 - 15464629
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  15464532 aagattgttgacccagttcggtccaatatgatctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 15464629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 11917068 - 11916971
Alignment:
Q  111 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatat-gtgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||||||| |||  |||| |||||||||||| ||||||||||    
T  11917068 agattgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaa 11916971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 14520230 - 14520327
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||| |||| |||||||||||| ||||||| |||| |||| ||||||||||  ||||||||||    
T  14520230 aagattgttgacccagttcggtccaatatgacctaatctaggggggagagcagctcttcaatccactatgatgaaagtgttacaaagagttacaagaa 14520327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 17004057 - 17003988
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg 178  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  17004057 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctcttcaatccactatg 17003988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 3880299 - 3880397
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||||||||  |||||| | |||||||| ||||||||| || ||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  3880299 aagattgttgattcagttctgtccaatatgacctaatctgaggcagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 3880397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 12084269 - 12084175
Alignment:
Q  113 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    |||||||||||||||| | ||| |||| |||||| ||||| ||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  12084269 attgttgacccagttcggtccactatgacctaatatggggcagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 12084175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 19588746 - 19588844
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | ||||||||  |||||||  ||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  19588746 aagattgttgacccagttcggtccaatatgaactaatcttagggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 19588844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 28832259 - 28832356
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    |||||||||||||| |||| | |||||||| ||||||||||||||||||||||| |||||||||| || | |||| |||||||||   ||||||||||    
T  28832259 aagattgttgacccggttcggtccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaatgagttacaagaa 28832356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 42127507 - 42127410
Alignment:
Q  110 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | | |||||| ||||||||||||||||||||||| | |||||||| || | |||| |||||||||   ||||||||||    
T  42127507 aagattgttgacccagttcgatctaatatgacctaatctgggggagagagcagccccccaatccactaagatgaaagtgttacaatgagttacaagaa 42127410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 4410301 - 4410241
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||||||||||||||    
T  4410301 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagctctccaatcca 4410241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 15552524 - 15552464
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  15552524 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 15552464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 31179371 - 31179431
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  31179371 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 31179431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 31300693 - 31300629
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||||||| | |||||||| |||| |||| ||||||||| | ||||||||||||    
T  31300693 aagattgttgacccagttcggtccaatatgacctagtctgagggagagagaaactctccaatcca 31300629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 31543013 - 31542953
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  31543013 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 31542953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 31545359 - 31545299
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  31545359 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 31545299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 27910729 - 27910675
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 167  Q
    ||||||||||||||| | ||||  || ||||||||||||||||||||||||||||    
T  27910729 ttgttgacccagttcggtccaaattgacctaatctgggggagagagcagctctcc 27910675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 3373137 - 3373197
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||| | ||||||||||    
T  3373137 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcaaccctccaatcca 3373197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 10749979 - 10749919
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  10749979 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 10749919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 15354575 - 15354635
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  15354575 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 15354635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 177; Significance: 2e-95; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 9224599 - 9224396
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  9224599 ccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagca-aaacaagataagcggtaaaaggaagaacaa 9224501  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||     
T  9224500 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttag 9224401  T
Q  201 aagaa 205  Q
    |||||    
T  9224400 aagaa 9224396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 9229386 - 9229183
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  9229386 ccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagca-aaacaagataagcggtaaaaggaagaacaa 9229288  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||     
T  9229287 aacaccgagaagattgttaacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttag 9229188  T
Q  201 aagaa 205  Q
    |||||    
T  9229187 aagaa 9229183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 51520349 - 51520553
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  51520349 ccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccatacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaa 51520448  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  51520449 aacaccgagaagattgttgacccagttctgccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 51520548  T
Q  201 aagaa 205  Q
    |||||    
T  51520549 aagaa 51520553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 56146904 - 56146700
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  56146904 ccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaagaacaa 56146805  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  56146804 aacaccgagaagattgttggtccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 56146705  T
Q  201 aagaa 205  Q
    |||||    
T  56146704 aagaa 56146700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 2 - 210
Target Start/End: Complemental strand, 45357488 - 45357280
Alignment:
Q  2 caagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaa 100  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||| ||||||||| ||||||    
T  45357488 caagctaacaacaacaaaacagtcctagactagtgtaaagcaaaaccacacaa-gagattccaaagcacaaacaagataagcggtaaaaggaaagaacaa 45357390  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  45357389 aacaccgagaagattgttgacccagttcagccaatatggcataatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 45357290  T
Q  201 aagaatctag 210  Q
    |||| |||||    
T  45357289 aagactctag 45357280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 45348009 - 45347807
Alignment:
Q  2 caagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaa 100  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||| ||||||||| ||||||    
T  45348009 caagctaacaacaacaaaacagtcctagactagtgtaaagcaaaaccacacaa-gagattccaaagcacaaacaagataagcggtaaaaggaaagaacaa 45347911  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  45347910 aacaccgagaagattgttgacccagttcagccaatatggcttaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 45347811  T
Q  201 aaga 204  Q
    ||||    
T  45347810 aaga 45347807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 24741839 - 24742037
Alignment:
Q  7 caacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacac 105  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||    
T  24741839 caacaacaacaaaaacagccctagactagtgtagagcaaaaccacacaaagagataccaaagca-aaacaagataagcaagaaa-ggaagaacaaaacac 24741936  T
Q  106 cgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaaga 204  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||    
T  24741937 caagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaaga 24742036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 18855619 - 18855827
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaaca 99  Q
    |||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||| || ||| ||||||||||||||| || ||||||||| |||||    
T  18855619 ccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacacaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaaca 18855716  T
Q  100 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtt 198  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18855717 aaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggtt 18855815  T
Q  199 acaagaatctag 210  Q
    |||||| |||||    
T  18855816 acaagactctag 18855827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 29760541 - 29760738
Alignment:
Q  7 caacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacacc 106  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||| | ||||||| ||||||||||||| | ||| ||||||||||||||||    
T  29760541 caacaacaacaaaacaaccctagactagtgtagagcaaaaccacacaaagagagaacaaagca-aaacaagataagcaagaaa-ggaagaacaaaacacc 29760638  T
Q  107 gagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  29760639 aagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 29760738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 3813916 - 3814125
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaa-ccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaaca 99  Q
    |||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||||| || ||| ||||||||||||||||| | ||| |||||||||    
T  3813916 ccaagcaaacaacaacaaaacagtcctagactagtgtatcgcaaaaaccacacaaagagctaacaa-gcataaacaagataagcaagaaa-ggaagaaca 3814013  T
Q  100 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtt 198  Q
    |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3814014 aaacaccatgcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggtt 3814113  T
Q  199 acaagaatctag 210  Q
    |||||| |||||    
T  3814114 acaagactctag 3814125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 5732554 - 5732766
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||||||||||||  ||||||||||| |||||||||||||||| || |||||||  |||||||||| || |||| | ||||||||    
T  5732554 ccaagctaacaacaacaaaacagccctaagctagtgtatagtaaaaccacacaaagagctaacaaagca--aacaagataaacggtaaaggaaagaacaa 5732651  T
Q  101 aa----caccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag 195  Q
    ||    ||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  5732652 aaaaaacactgaacaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag 5732751  T
Q  196 gttacaagaatctag 210  Q
    ||||||||| |||||    
T  5732752 gttacaagactctag 5732766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 192
Target Start/End: Complemental strand, 28468647 - 28468542
Alignment:
Q  88 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgt 185  Q
    |||||||||||||| ||||| | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| |||| ||    
T  28468647 aaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagt 28468549  T
Q  186 gttacaa 192  Q
    |||||||    
T  28468548 gttacaa 28468542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 31985752 - 31985634
Alignment:
Q  88 aaaggaagaacaaa-acaccgagaagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatg 184  Q
    |||||||||||||| ||||| | ||||||||||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||| |||| |||| |    
T  31985752 aaaggaagaacaaacacaccaa-aagattgttgacccagttcggtccaatatgacctaatctgggg-agagagcagctctccaatccactatgatgaaag 31985655  T
Q  185 tgttacaaaaggttacaagaa 205  Q
    ||||||||| |||||||||||    
T  31985654 tgttacaaagggttacaagaa 31985634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 10047379 - 10047477
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  10047379 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 10047477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 39245994 - 39246092
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  39245994 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 39246092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 36315326 - 36315229
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    |||| |||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  36315326 aagaatgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 36315229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 36329535 - 36329438
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    |||| |||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  36329535 aagaatgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 36329438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 38152536 - 38152449
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatat-gtgaatgtgttacaaaag 195  Q
    ||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  38152536 aagattgttgacccagttcggtccaatatgacataatctgggggagagagcagctctccaatccactatggtgaaagtgttacaaaag 38152449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 16623390 - 16623292
Alignment:
Q  110 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| |  ||||||| |||||||||| ||||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  16623390 aagattgttgacccagttcggttcaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 16623292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 5396768 - 5396671
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||| |||| ||||| ||||  ||||||||||    
T  5396768 aagattgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttgcaaagagttacaagaa 5396671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 3796616 - 3796518
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||| |||||||||||||| ||||| |||||| |||| |||| |||||||||||| ||||||||||    
T  3796616 aagattgttgacccagttccgtccaatatgacctaatatgggggagagagcaactctctaatccactatgatgaaagtgttacaaaagagttacaagaa 3796518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 5143260 - 5143345
Alignment:
Q  111 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaa 194  Q
    |||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||| ||| |||| |||| |||||||||||    
T  5143260 agattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaacccactatgatgaaagtgttacaaaa 5143345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 5269288 - 5269204
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaa 192  Q
    ||||||||||||| ||||| | |||||||| ||||||||||||||||||||||| |||||||||| |||| |||| |||||||||    
T  5269288 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaa 5269204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 24333809 - 24333896
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 195  Q
    ||||||||| || |||||| | |||||||| |||||| ||||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  24333809 aagattgttaactcagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaacgtgttacaaaag 24333896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 5147678 - 5147763
Alignment:
Q  111 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaa 194  Q
    |||||||||||||||||| | |||||||| |||||| |||||||| ||||||||||||| |||| |||| |||| |||||||||||    
T  5147678 agattgttgacccagttcggtccaatatgacctaatttgggggagggagcagctctccagtccattatgatgaaagtgttacaaaa 5147763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 3777550 - 3777646
Alignment:
Q  111 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    |||||||||||||||||| | |||||||  |||||||| | |||||||| |||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  3777550 agattgttgacccagttcggtccaatataacctaatctagaggagagagtagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 3777646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 6743507 - 6743425
Alignment:
Q  115 tgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 195  Q
    |||||||||||||| | |||||||| ||||||||  ||||||||||||| |||||||||| |||| |||| ||||||||||||    
T  6743507 tgttgacccagttcggtccaatatgacctaatctacgggagagagcagccctccaatccactatgatgaaagtgttacaaaag 6743425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 205
Target Start/End: Complemental strand, 16630773 - 16630679
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||| ||||| | |||||||| | |||||||| ||||||| ||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  16630773 ttgttgacctagttcggtccaatatgacataatctggaggagagaacagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 16630679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 16931789 - 16931849
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  16931789 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 16931849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 16934143 - 16934203
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  16934143 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 16934203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 22780373 - 22780433
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  22780373 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 22780433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 44599838 - 44599898
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  44599838 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 44599898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 39774380 - 39774338
Alignment:
Q  131 ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    |||||||| |||| ||||||||| |||||||||||||||||||    
T  39774380 ccaatatgacctactctgggggatagagcagctctccaatcca 39774338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 6765177 - 6765117
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  6765177 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 6765117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 7941656 - 7941596
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  7941656 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 7941596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 18709164 - 18709224
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||  ||||||||||    
T  18709164 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagtcctccaatcca 18709224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 22782738 - 22782798
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||| ||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  22782738 ttgttgatccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 22782798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 177; Significance: 2e-95; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 22173387 - 22173184
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  22173387 ccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagca-aaataagataagcggtaaaaggaagaacaa 22173289  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  22173288 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 22173189  T
Q  201 aagaa 205  Q
    |||||    
T  22173188 aagaa 22173184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 7167143 - 7167341
Alignment:
Q  7 caacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacacc 106  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| | ||| ||||||||||||||||    
T  7167143 caacaacaacaaaacagccctagactagtgtagagcaaaaccacacaaagagataacaaagcataaacaagataagcaagaaa-ggaagaacaaaacacc 7167241  T
Q  107 gagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  7167242 aagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 7167341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 28504053 - 28503865
Alignment:
Q  7 caacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacacc 106  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||          ||||||||||||||||||    
T  28504053 caacaacaacaaaacagcccttgactagtgtatagcaaaaccacacaaagagataacaaagcataaacaaga----------aaggaagaacaaaacacc 28503964  T
Q  107 gagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  28503963 gagaagattgttgacccagttcagccaatatggcctaatctggggaagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 28503865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 2671790 - 2671586
Alignment:
Q  1 ccaagccaacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaaca 99  Q
    |||||| ||||||||||||| ||||||||| |||||||| || ||||||||||||||||||| ||||||| ||||||||||||| | ||| |||||||||    
T  2671790 ccaagcaaacaacaacaaaaacagccctagtctagtgtagagaaaaaccacacaaagagataacaaagca-aaacaagataagcaagaaa-ggaagaaca 2671693  T
Q  100 aaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggtt 198  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  2671692 aaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggtt 2671593  T
Q  199 acaagaa 205  Q
    |||||||    
T  2671592 acaagaa 2671586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 8739224 - 8739063
Alignment:
Q  43 aaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcct 142  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8739224 aaaaccacacaaagagataccaaagca-aaacaagataagcaagaaa-ggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcct 8739127  T
Q  143 aatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  8739126 aatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 8739063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 9091462 - 9091301
Alignment:
Q  43 aaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcct 142  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9091462 aaaaccacacaaagagataccaaagca-aaacaagataagcaagaaa-ggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcct 9091365  T
Q  143 aatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  9091364 aatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 9091301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 18656324 - 18656536
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||||||||||||  ||||||||||| |||||||||||||||| || |||||||  |||||||||| || |||| | ||||||||    
T  18656324 ccaagctaacaacaacaaaacagccctaagctagtgtatagaaaaaccacacaaagagctaacaaagca--aacaagataaacggtaaaggaaagaacaa 18656421  T
Q  101 aa----caccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag 195  Q
    ||    ||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  18656422 aaaaaacactgaacaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag 18656521  T
Q  196 gttacaagaatctag 210  Q
    ||||||||| |||||    
T  18656522 gttacaagactctag 18656536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 2673124 - 2672914
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaac 98  Q
    |||||| ||||||||||||||||||  || ||| |||||||||||||||||| ||||| || ||| |||||| |||||||| | || ||| |||  ||||    
T  2673124 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcataa-caagataaaccatgaaaagaaaagaac 2673027  T
Q  99 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-g 196  Q
    ||| |||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2673026 aaa-caccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagag 2672928  T
Q  197 ttacaagaatctag 210  Q
    ||||||||||||||    
T  2672927 ttacaagaatctag 2672914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 2677280 - 2677070
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaac 98  Q
    |||||| ||||||||||||||||||  || ||| |||||||||||||||||| ||||| || ||| |||||| |||||||| | || ||| |||  ||||    
T  2677280 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcataa-caagataaaccatgaaaagaaaagaac 2677183  T
Q  99 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-g 196  Q
    ||| |||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2677182 aaa-caccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagag 2677084  T
Q  197 ttacaagaatctag 210  Q
    ||||||||||||||    
T  2677083 ttacaagaatctag 2677070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 8512108 - 8512319
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataag-cgataaaaggaa--gaa 97  Q
    |||||| ||||||||||||||||||  || ||| ||| ||||| |||||||| ||||| || ||| |||||  ||||||||  ||||||| | ||  |||    
T  8512108 ccaagctaacaacaacaaaacagcctaagcctaatgtgtagcacaaccacactaagagttaacaa-gcata--caagataaaacgataaacgaaaacgaa 8512204  T
Q  98 caaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag- 195  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8512205 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaga 8512304  T
Q  196 gttacaagaatctag 210  Q
    |||||||||||||||    
T  8512305 gttacaagaatctag 8512319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 8516988 - 8517199
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataag-cgataaaaggaa--gaa 97  Q
    |||||| ||||||||||||||||||  || ||| ||| ||||| |||||||| ||||| || ||| |||||  ||||||||  ||||||| | ||  |||    
T  8516988 ccaagctaacaacaacaaaacagcctaagcctaatgtgtagcacaaccacactaagagttaacaa-gcata--caagataaaacgataaacgaaaacgaa 8517084  T
Q  98 caaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag- 195  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8517085 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaga 8517184  T
Q  196 gttacaagaatctag 210  Q
    |||||||||||||||    
T  8517185 gttacaagaatctag 8517199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 50 - 205
Target Start/End: Complemental strand, 40372949 - 40372795
Alignment:
Q  50 cacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgg 149  Q
    |||| ||||||| ||||||| ||||||||||||| | | | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40372949 cacatagagataacaaagca-aaacaagataagcaagata-ggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgg 40372852  T
Q  150 gggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  40372851 gggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 40372795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 24968000 - 24968209
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaac 98  Q
    |||||| ||||||||||||||||||  || ||| |||||||||||||||||| ||||| || ||| |||||  |||||||| ||||||||| ||  ||||    
T  24968000 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaac 24968096  T
Q  99 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-g 196  Q
    ||| ||||||| |||||||||||||||||||||||||| |||| |||| | |||||||||| |||||||||||||||||||||||||||||||||||| |    
T  24968097 aaa-caccgagcaagattgttgacccagttcagccaatgtggcttaattttggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagag 24968195  T
Q  197 ttacaagaatctag 210  Q
    ||||||||||||||    
T  24968196 ttacaagaatctag 24968209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 8477263 - 8477459
Alignment:
Q  7 caacaacaacaaaac-agccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaa-aca 104  Q
    ||||||||||||||| ||||||||||||||||| | ||| ||||||  |||| |   |||||||  |||||||||||| | ||| | ||||||||| |||    
T  8477263 caacaacaacaaaaccagccctagactagtgtagaacaacaccaca--aagataatacaaagca--aacaagataagcaagaaa-gaaagaacaaacaca 8477357  T
Q  105 ccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaag 203  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  8477358 ccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaag 8477457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 10 - 210
Target Start/End: Original strand, 32475387 - 32475585
Alignment:
Q  10 caacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccg 107  Q
    ||||||||||||||||  || ||| |||| |||||| |||||| ||||| || ||| |||||  |||||||| ||||||||| ||  ||||||||||||     
T  32475387 caacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacacca 32475482  T
Q  108 ag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaat 206  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  32475483 agcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgt-ttacaaagagttacaagaat 32475581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 210
Target Start/End: Original strand, 32480245 - 32480443
Alignment:
Q  10 caacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccg 107  Q
    ||||||||||||||||  || ||| |||| |||||| |||||| ||||| || ||| |||||  |||||||| ||||||||| ||  ||||||||||||     
T  32480245 caacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacacca 32480340  T
Q  108 ag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaat 206  Q
    |  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  32480341 accaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgt-ttacaaagagttacaagaat 32480439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 26928687 - 26928591
Alignment:
Q  110 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||| |||| |||||||||| |||||||||||    
T  26928687 aagattgttgacccagttcagccaatatgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaagggttacaagaa 26928591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 1305927 - 1306045
Alignment:
Q  88 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgt 185  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || | |||| ||    
T  1305927 aaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatggcctaatctaggggagatagcagctctccaatccactacgatgaaagt 1306025  T
Q  186 gttacaaaaggttacaagaa 205  Q
    |||||||| |||||||||||    
T  1306026 gttacaaagggttacaagaa 1306045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 10207826 - 10207983
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaac 98  Q
    |||||| ||||||||||||||||||  || ||| |||||||||||||||||| ||||| || ||| |||||| |||||||| | || ||| |||  ||||    
T  10207826 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcataa-caagataaaccatgaaaagaaaagaac 10207923  T
Q  99 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagag 158  Q
    ||| |||| || |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10207924 aaa-caccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagag 10207983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 32143299 - 32143418
Alignment:
Q  88 aaaggaagaacaaa-acaccgagaagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatg 184  Q
    |||||||||||||| ||||| | ||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| |    
T  32143299 aaaggaagaacaaacacaccaa-aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaag 32143397  T
Q  185 tgttacaaaaggttacaagaa 205  Q
    ||||||||| |||||||||||    
T  32143398 tgttacaaagggttacaagaa 32143418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 8370573 - 8370476
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  8370573 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 8370476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 27975039 - 27974942
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  27975039 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 27974942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 18552970 - 18552872
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  18552970 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 18552872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 16264350 - 16264447
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  16264350 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 16264447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 21711223 - 21711320
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| |||| |||| ||||||||||  ||||||||||    
T  21711223 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcaaatccactatgatgaaagtgttacaaagagttacaagaa 21711320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 27452958 - 27453055
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||| ||||||| | |||||||| ||||||| |||||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  27452958 aagattgttgatccagttcggtccaatatgacctaatccgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 27453055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 36029094 - 36029191
Alignment:
Q  111 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||||||||||||||| | |||||||| |||||||||||||||| ||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  36029094 agattgttgacccagttctgtccaatatgacctaatctgggggagaaagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 36029191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 27986533 - 27986449
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaa 192  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  27986533 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 27986449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 1736389 - 1736294
Alignment:
Q  113 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  1736389 attgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 1736294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 30709877 - 30709779
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| |||| ||||  ||||||||||| ||||||||||    
T  30709877 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaattgttacaaaagagttacaagaa 30709779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 33386753 - 33386669
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaa 192  Q
    ||||||||||| ||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  33386753 aagattgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 33386669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 3716089 - 3715991
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||| || |||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||    
T  3716089 aagattgttgacccagttcggtccaatatgacctaatctaggagagagagcagctctccaatctactatgatgaaagtgttacaaaagagttacaagaa 3715991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 40592869 - 40592771
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| ||||||||| ||||||||| |||||||||||| | |||| |||| |||||||||||| ||||||||||    
T  40592869 aagattgttgacccagttcggtccaatatgacctaatctgtgggagagagaagctctccaatcgactatgatgaaagtgttacaaaagagttacaagaa 40592771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 48438214 - 48438312
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||| |||||| ||||| | |||||||| ||||||||||||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  48438214 aagattattgacctagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 48438312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 6794800 - 6794703
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    |||||||||||||| |||  | |||||||| |||||| ||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  6794800 aagattgttgacccggttaggtccaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 6794703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 28501750 - 28501698
Alignment:
Q  153 agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 205  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  28501750 agagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 28501698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 25795781 - 25795843
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatc 171  Q
    ||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||||    
T  25795781 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 25795843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 26298988 - 26299086
Alignment:
Q  110 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| |  ||||||| | ||||||||||||||||||||| |||||||| | |||| |||| |||||||||||| ||||||||||    
T  26298988 aagattgttgacccagttcggttcaatatgacataatctgggggagagagcagccctccaatctactatgatgaaagtgttacaaaagagttacaagaa 26299086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 1417577 - 1417513
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||| | ||||||||||    
T  1417577 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcatccctccaatcca 1417513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 47923993 - 47923895
Alignment:
Q  110 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||| |||||||||||||| || ||||| | |||| |||| ||| |||||||| ||||||||||    
T  47923993 aagattgttgacccagttcgatccaatatgacctaatctaggggagagagcagcccttcaatctactatgatgaaagtgctacaaaagagttacaagaa 47923895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 37466291 - 37466388
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    |||||||||||| |||||| | |||||||| ||||||||||||||||||| ||| |||||||||| || | |||| |||||||||   ||||||||||    
T  37466291 aagattgttgacacagttcggtccaatatgacctaatctgggggagagagtagccctccaatccactaagatgaaagtgttacaatgagttacaagaa 37466388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 39040079 - 39039995
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaa 192  Q
    ||||||||||||| ||||| | |||||||| |||||||||||| ||||| || |||||||||||| |||| |||| |||||||||    
T  39040079 aagattgttgacctagttcggtccaatatgacctaatctggggaagagaacaactctccaatccactatgatgaaagtgttacaa 39039995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 4387014 - 4386947
Alignment:
Q  110 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaata 176  Q
    ||||||||| |||||||| ||  || |||| |||| ||||||||||||||||||||||||||||||||    
T  4387014 aagattgtttacccagtttagttcagtatgacctactctgggggagagagcagctctccaatccaata 4386947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 40844652 - 40844749
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||||||||  |||||| | |||||||| |||||||||||| |||||||||| ||| |||||| |||| |||| |||||||||||| ||||||||||    
T  40844652 aagattgttgattcagttcggtccaatatgacctaatctgggg-agagagcagccctcaaatccactatgatgaaagtgttacaaaagagttacaagaa 40844749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 3328443 - 3328346
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||||  |||||||| |||||||| | |||||||||||| || ||||||| || | |||| |||||||||   ||||||||||    
T  3328443 aagattgttgacccagttcattccaatatgacctaatctagaggagagagcagcccttcaatccactaagatgaaagtgttacaatgagttacaagaa 3328346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 38210629 - 38210569
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| | |||||||||||||||||||||||||||    
T  38210629 ttgttgacccagttcggtccaatctgacctagtatgggggagagagcagctctccaatcca 38210569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 50494258 - 50494198
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  50494258 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 50494198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 53894055 - 53894119
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatat 177  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||||||    
T  53894055 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatccaatat 53894119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 24695251 - 24695153
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||| ||||| | |||||||| ||||||||  ||||||||||| | ||| |||||  |||| |||| |||||||||||| ||||||||||    
T  24695251 aagattgttgacctagttcggtccaatatgacctaatctacgggagagagcaaccctctaatccgctatgatgaaagtgttacaaaagagttacaagaa 24695153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 458543 - 458483
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  458543 ttgttgacccagttcggtccaacctgacctagtctgggggagagagcagccctccaatcca 458483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 6063444 - 6063504
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    |||| |||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  6063444 ttgtggacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 6063504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 10621528 - 10621588
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| ||  ||| |||||||||||||||||| ||||||||||    
T  10621528 ttgttgacccagttcggtccaatctgagctagtctgggggagagagcagccctccaatcca 10621588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 39153357 - 39153405
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagaga 157  Q
    ||||||||||||||||||||| ||||  || ||||||||||||||||||    
T  39153357 aagattgttgacccagttcagtccaacttgacctaatctgggggagaga 39153405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 8 - 205
Target Start/End: Complemental strand, 7290112 - 7289915
Alignment:
Q  8 aacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccg 107  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||    
T  7290112 aacaacaacaaagcagccctagactagtgtatagcaaaaccacacaaagagataacaaaccataaacaagataagtgataaaaggaagaacaaaacaccg 7290013  T
Q  108 agaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  7290012 agaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 7289915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 6311190 - 6311393
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | ||| ||||||||||    
T  6311190 ccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacactaagagataacaaagcataaacaagataagcaagaaa-ggaagaacaa 6311288  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  6311289 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 6311388  T
Q  201 aagaa 205  Q
    |||||    
T  6311389 aagaa 6311393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 39785016 - 39784807
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaaca 99  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||||||||| |||||    
T  39785016 ccaagccaataacaacaaaacagccctaagctagtgtatagcaaaaccacacaa-gagattccaaagcacaaacaagataagcggtaaaaggaaagaaca 39784918  T
Q  100 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtt 198  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39784917 aaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggtt 39784819  T
Q  199 acaagaatctag 210  Q
    |||||| |||||    
T  39784818 acaagactctag 39784807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 25328470 - 25328262
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaaca 99  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||| ||||||| |||||| || |||| | || |||||    
T  25328470 ccaagccaacaacaacaaaacaacccta-actagtgtatagcaaaaccacacaa-gagataccaaaacataaacgagataaacggtaaaggaaaagaaca 25328373  T
Q  100 aaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  25328372 aaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggtta 25328273  T
Q  200 caagaatctag 210  Q
    ||||| |||||    
T  25328272 caagactctag 25328262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 33038005 - 33037807
Alignment:
Q  7 caacaacaacaa--aacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaaca 104  Q
    ||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| | ||||| ||||||||||||    
T  33038005 caacaacaacaataaacagccctagactagtgtagagcaaaaccacacaaagagataccaaagca-aaacaagataagcaagaaaag-aagaacaaaaca 33037908  T
Q  105 ccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaaga 204  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  33037907 ccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaaga 33037808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 36979276 - 36979474
Alignment:
Q  7 caacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacac 105  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||    
T  36979276 caacaacaacaaaaacagccctagactagtgtagagcaaaaccacacaaagagataccaaagca-aaacaagataagcaagaaa-ggaagaacaaaacac 36979373  T
Q  106 cgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaaga 204  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||    
T  36979374 caagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaaga 36979473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 4760274 - 4760075
Alignment:
Q  7 caacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacac 105  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| | ||| ||||||||||||||     
T  4760274 caacaacaacaaaaacagccctagactagtgtagagcaaaaccacacaaagagataacaaagcataaacaagataagcaagaaa-ggaagaacaaaacat 4760176  T
Q  106 cgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaaga 204  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||    
T  4760175 caagaagattgttgacccagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaaga 4760076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 30655542 - 30655743
Alignment:
Q  7 caacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaa---- 102  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||| | ||| ||||||||||||        
T  30655542 caacaacaa-aaaacagccctagactagtgtagagcaaaaccacacatagagataacaaagcataaacaagataagcaagaaa-ggaagaacaaaaaaaa 30655639  T
Q  103 caccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttaca 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||| |||||||    
T  30655640 caccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatctaatatgatgaaagtgttacaaagggttaca 30655739  T
Q  202 agaa 205  Q
    ||||    
T  30655740 agaa 30655743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 10689341 - 10689143
Alignment:
Q  7 caacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacac 105  Q
    |||||||||||||| || ||||||  ||||||| |||||||||||||||||||||||||||||| ||||||||||||  | ||| |||||||||||||||    
T  10689341 caacaacaacaaaaacaaccctagtgtagtgtagagcaaaaccacacaaagagataccaaagca-aaacaagataagtaagaaa-ggaagaacaaaacac 10689244  T
Q  106 cgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaaga 204  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| | ||||||||||    
T  10689243 caagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacagagggttacaaga 10689144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 18853372 - 18853167
Alignment:
Q  1 ccaagccaacaacaacaaaaca-gccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaaca 99  Q
    |||||| |||||||| |||| | |||||||||| || || |||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||    
T  18853372 ccaagcaaacaacaaaaaaaaacgccctagacttgtttagagcaaaaccacacaaagagataccaaagca-aaacaagataagcaagaaa-ggaagaaca 18853275  T
Q  100 aaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatat-gtgaatgtgttacaaaa-ggt 197  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |||    
T  18853274 aaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggt 18853175  T
Q  198 tacaagaa 205  Q
    ||||||||    
T  18853174 tacaagaa 18853167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 35745284 - 35745493
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaac 98  Q
    |||||| ||||||||||||||||||  || ||| |||||||||||||||||| ||||| || ||| |||||  |||||||| ||||||||||||  ||||    
T  35745284 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaaggaaaagaac 35745380  T
Q  99 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-g 196  Q
    ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  35745381 aaa-caccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagag 35745479  T
Q  197 ttacaagaatctag 210  Q
    ||||||||||||||    
T  35745480 ttacaagaatctag 35745493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 18870763 - 18870561
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||| ||||| |||||||||| || || |||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||||||    
T  18870763 ccaagcaaacaacaa-aaaac-gccctagacttgtttagagcaaaaccacacaaagagataccaaagca-aaacaagataagcaagaaa-ggaagaacaa 18870668  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatat-gtgaatgtgttacaaaa-ggtt 198  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| ||||    
T  18870667 aacaccaagaagattgttgacccagttcatccaatatggcctaatctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggtt 18870568  T
Q  199 acaagaa 205  Q
    |||||||    
T  18870567 acaagaa 18870561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 10 - 210
Target Start/End: Complemental strand, 10684447 - 10684247
Alignment:
Q  10 caacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccg 107  Q
    ||||||||||||||||  || ||| |||| |||||| |||||| ||||| || ||| |||||  |||||||| ||||||||| ||  ||||||||||||     
T  10684447 caacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacacca 10684352  T
Q  108 ag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaa 205  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10684351 agcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa 10684252  T
Q  206 tctag 210  Q
    |||||    
T  10684251 tctag 10684247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 1262148 - 1261954
Alignment:
Q  7 caacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgata-aaaggaagaacaaa-ac 103  Q
    |||||||||||||| ||||||||| |||||||| ||||| |||||| | ||| ||||  |||||  |||||||||||  ||| |||||||||||||| ||    
T  1262148 caacaacaacaaaaacagccctagtctagtgtagagcaacaccaca-agaga-atac--aagca--aacaagataag--atagaaaggaagaacaaacac 1262057  T
Q  104 accgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaa 202  Q
    ||| | |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||| |||||||||| ||||||||    
T  1262056 accaaaaagattgttgacccagttcaaccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaa 1261957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 26287879 - 26287985
Alignment:
Q  88 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgt 185  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||    
T  26287879 aaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagt 26287978  T
Q  186 gttacaa 192  Q
    |||||||    
T  26287979 gttacaa 26287985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 26301136 - 26301242
Alignment:
Q  88 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgt 185  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||    
T  26301136 aaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagt 26301235  T
Q  186 gttacaa 192  Q
    |||||||    
T  26301236 gttacaa 26301242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 26313130 - 26313236
Alignment:
Q  88 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgt 185  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||    
T  26313130 aaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagt 26313229  T
Q  186 gttacaa 192  Q
    |||||||    
T  26313230 gttacaa 26313236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 31071349 - 31071229
Alignment:
Q  88 aaaggaagaacaaa-acaccgagaagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatg 184  Q
    |||||||||||||| ||||| | ||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| |    
T  31071349 aaaggaagaacaaacacaccaaaaagattgttgaccgagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaag 31071250  T
Q  185 tgttacaaaaggttacaagaa 205  Q
    ||||||||| |||||||||||    
T  31071249 tgttacaaagggttacaagaa 31071229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 26403327 - 26403240
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 195  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  26403327 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 26403240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 4456028 - 4456125
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||| |||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  4456028 aagattgctgacccggttcggtccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 4456125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 205
Target Start/End: Original strand, 7412305 - 7412438
Alignment:
Q  75 aagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcc 172  Q
    ||||||||| || |||| | ||||||| |||||  ||| |||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||||||    
T  7412305 aagataagcaatgaaagaaggaacaaacacaccatgaaaattgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctccaatcc 7412404  T
Q  173 aatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    | |||| |||| ||||||||||  ||||||||||    
T  7412405 actatgatgaaagtgttacaaagagttacaagaa 7412438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 19175851 - 19175754
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||| ||||| | |||||||| ||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||  ||||||||||    
T  19175851 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaagagttacaagaa 19175754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 9765914 - 9765852
Alignment:
Q  112 gattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||    
T  9765914 gattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatcca 9765852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 23799674 - 23799576
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||| ||| |||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  23799674 aagattgttgacccagttcggtccaatatgacctaatttggaggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 23799576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 4696693 - 4696624
Alignment:
Q  110 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccaatatg 178  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  4696693 aagattgttgacccagttcgatccaatatgacctaatctgggggagagagcagccctccaatccactatg 4696624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 6127224 - 6127319
Alignment:
Q  113 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||| |||||| | |||||||| |||||| ||||| ||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  6127224 attgttgactcagttcggtccaatatgacctaatttggggaagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 6127319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 5702580 - 5702482
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||| |||||||||||||| | |||||||||  |||| |||| |||||||||||| ||||||||||    
T  5702580 aagattgttgacccagttcggtccaatatgacctaatatgggggagagagcatccctccaatcccctatgatgaaagtgttacaaaagagttacaagaa 5702482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 19752491 - 19752394
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||| ||||| | |||||||| |||| ||| ||||||||||||||||||||||||| || | |||| |||||||||   ||||||||||    
T  19752491 aagattgttgacctagttcggtccaatatgacctagtctaggggagagagcagctctccaatccactaagatgaaagtgttacaatgagttacaagaa 19752394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 43079937 - 43079877
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  43079937 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 43079877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 43082308 - 43082248
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  43082308 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 43082248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 6813683 - 6813750
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaata 176  Q
    ||||||||| ||||||||| | |||||||  ||||  || ||||||||||||||||||||||||||||    
T  6813683 aagattgttaacccagttcggtccaatataacctacactaggggagagagcagctctccaatccaata 6813750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 173
Target Start/End: Complemental strand, 18811015 - 18810982
Alignment:
Q  140 cctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||||||||||| ||||||||||    
T  18811015 cctaatctgggggagagagcagccctccaatcca 18810982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 44721178 - 44721118
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||  || |||| |||| ||||||||||||||||||||||||    
T  44721178 ttgttgacccagttcggtccaaattgacctagtctgcgggagagagcagctctccaatcca 44721118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 35254 - 35051
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  35254 ccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagca-aaacaagataagcggtaaaaggaagaacaa 35156  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||     
T  35155 aacaccgagaagattgttaacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttag 35056  T
Q  201 aagaa 205  Q
    |||||    
T  35055 aagaa 35051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 173; Significance: 5e-93; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 22010889 - 22010686
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22010889 ccaagcaaacaacaacaaagccgccctagacaagtgtatagcaaaaccacacaaagagataccaaagca-aaacaagataagcgataaaaggaagaacaa 22010791  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  22010790 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 22010691  T
Q  201 aagaa 205  Q
    |||||    
T  22010690 aagaa 22010686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 14737769 - 14737560
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaa-gagataccaaagcataaacaagataagcgataaaaggaagaaca 99  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||| |||||||    
T  14737769 ccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaaagagataccaaagca-aaacaagataagcggtaaaagaaagaaca 14737671  T
Q  100 aaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtta 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  14737670 aaacaccgagaagattgttgatccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggtta 14737571  T
Q  200 caagaatctag 210  Q
    ||||| |||||    
T  14737570 caagactctag 14737560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 11856864 - 11857070
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  11856864 ccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagca-aaacaagacaagcgataaaaggaagaacaa 11856962  T
Q  101 aa---caccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggt 197  Q
    ||   |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  11856963 aaaaacaccaagaagattgttgacccagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggt 11857062  T
Q  198 tacaagaa 205  Q
    ||||||||    
T  11857063 tacaagaa 11857070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 9 - 210
Target Start/End: Complemental strand, 14742620 - 14742420
Alignment:
Q  9 acaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccga 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| ||||||||||||||||    
T  14742620 acaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagatatcaaagca-aaacaagataagcggtaaaagaaagaacaaaacaccga 14742522  T
Q  109 gaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatct 208  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||    
T  14742521 gaagattgttgacccagttcagccaatatgacctaatttgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactct 14742422  T
Q  209 ag 210  Q
    ||    
T  14742421 ag 14742420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 28184397 - 28184598
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaaca 99  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||| |||||    
T  28184397 ccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaa-gagattccaaagcataaacaagataagcggtaaaaagaaagaaca 28184495  T
Q  100 aaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtta 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  28184496 aaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatctaatatgagaaagtgttacaaaaggtta 28184595  T
Q  200 caa 202  Q
    |||    
T  28184596 caa 28184598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 6438393 - 6438601
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaaca 99  Q
    |||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||| || ||| ||||||||||||||| || ||||||||| |||||    
T  6438393 ccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacacaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaaca 6438490  T
Q  100 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtt 198  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6438491 aaacaccgagcaagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggtt 6438589  T
Q  199 acaagaatctag 210  Q
    |||||| |||||    
T  6438590 acaagactctag 6438601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 2 - 206
Target Start/End: Complemental strand, 28155762 - 28155557
Alignment:
Q  2 caagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaa 100  Q
    ||||| ||||||||||||||||||   |||| ||||||||||||||||||| ||||| || ||| ||||||||||||||| || |||| |||| ||||||    
T  28155762 caagctaacaacaacaaaacagcctatgacttgtgtatagcaaaaccacactaagagctaacaa-gcataaacaagataaacggtaaatggaaagaacaa 28155664  T
Q  101 aacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtta 199  Q
    ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  28155663 aacaccgaacaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggtta 28155564  T
Q  200 caagaat 206  Q
    |||||||    
T  28155563 caagaat 28155557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 6005310 - 6005519
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaac 98  Q
    |||||| ||||||||||||||||||  || ||| |||||||||||||||||| ||||| || ||| |||||  |||||||| ||||||||||||  ||||    
T  6005310 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaaggaaaagaac 6005406  T
Q  99 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-g 196  Q
    ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6005407 aaa-caccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagag 6005505  T
Q  197 ttacaagaatctag 210  Q
    ||||||||||||||    
T  6005506 ttacaagaatctag 6005519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 2 - 210
Target Start/End: Original strand, 16838638 - 16838846
Alignment:
Q  2 caagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaaca 99  Q
    ||||| ||||||||||||||||||  || ||| |||||||||||||||||| ||||| || ||| |||||  |||||||| ||||||||| ||  |||||    
T  16838638 caagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaaca 16838734  T
Q  100 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-gt 197  Q
    || ||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  16838735 aa-caccgagcaagattgttgacccagttcagccaatgtggcttaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagt 16838833  T
Q  198 tacaagaatctag 210  Q
    |||||||||||||    
T  16838834 tacaagaatctag 16838846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 33330639 - 33330428
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaa-ccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaa 97  Q
    |||||| ||||||||||||||||||  || ||| |||||||||||| |||||| ||||| || ||| |||||| |||||||| | || ||| |||  |||    
T  33330639 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaaccacactaagagctaacaa-gcataa-caagataaaccatgaaaagaaaagaa 33330542  T
Q  98 caaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag- 195  Q
    |||| |||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  33330541 caaa-caccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaga 33330443  T
Q  196 gttacaagaatctag 210  Q
    |||||||||||||||    
T  33330442 gttacaagaatctag 33330428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 8 - 210
Target Start/End: Complemental strand, 33336129 - 33335925
Alignment:
Q  8 aacaacaacaaaacagccctagactagtgtatagcaaaa-ccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaaca 104  Q
    ||||||||||||||||||  || ||| ||||||| |||| |||||| ||||| || ||| |||||| |||||||| | || ||| |||  ||||||| ||    
T  33336129 aacaacaacaaaacagcctaagcctaatgtatagtaaaaaccacactaagagctaacaa-gcataa-caagataaaccatgaaaagaaaagaacaaa-ca 33336033  T
Q  105 ccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaa 202  Q
    || || |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33336032 ccaagcaagattgttgacccagttcagccaatgtgacctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaa 33335933  T
Q  203 gaatctag 210  Q
    ||||||||    
T  33335932 gaatctag 33335925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 5674966 - 5674770
Alignment:
Q  7 caacaacaacaaaac-agccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaa-aca 104  Q
    ||||||||||||||| |||||||| |||||||| ||||| ||||||  ||||||   |||||||  ||||| |||||| | ||| | ||||||||| |||    
T  5674966 caacaacaacaaaaccagccctagtctagtgtagagcaacaccaca--aagagaatacaaagca--aacaatataagcaagaaa-gaaagaacaaacaca 5674872  T
Q  105 ccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaag 203  Q
    || |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  5674871 ccaaagagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaag 5674772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 5757575 - 5757478
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  5757575 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 5757478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 21356036 - 21356133
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||| |||| ||||||| ||  ||||||||||    
T  21356036 aagattgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttactaagagttacaagaa 21356133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 5343373 - 5343527
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaa-ccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaa 97  Q
    |||||| ||||||||||||||||||  || |||  ||||||||||| |||||| ||||| || ||| |||||  |||||||| ||||||| | ||  |||    
T  5343373 ccaagctaacaacaacaaaacagcctaagcctaaagtatagcaaaaaccacactaagagctaacaa-gcata--caagataaacgataaaggaaaacgaa 5343469  T
Q  98 caaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggaga 155  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||||||    
T  5343470 caaa-caccgagcaagattgttgacccagttcagccaatgtggcctaatctaggggaga 5343527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 5572338 - 5572240
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||| ||| | |||||||| |||||||| |||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  5572338 aagattgttgacccaattcggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 5572240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 10077262 - 10077176
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaa 194  Q
    ||||||||||||||| ||| | |||||||| ||||||||||||||||||||||| |||||||||| |||| |||| |||||||||||    
T  10077262 aagattgttgacccaattcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaa 10077176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 31086570 - 31086472
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||||| ||||||||  ||||||| |||||||||||| |||||||||||| |||| |||| |||||||||| | ||||||||||    
T  31086570 aagattgttgacccagttcagtccaatatgatctaatctaggggagagagcaactctccaatccactatgatgaaagtgttacaaaggagttacaagaa 31086472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 4629954 - 4630040
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaa 194  Q
    |||||||||||| |||||||| |||||||| |||||||| ||| ||||||||||||||||||||| || | |||| |||||||||||    
T  4629954 aagattgttgactcagttcagtccaatatgacctaatctagggaagagagcagctctccaatccactaagatgaaagtgttacaaaa 4630040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 31979513 - 31979611
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| | ||||||||||||||||||||| |||||||||| || | |||| ||||| |||||| ||||||||||    
T  31979513 aagattgttgacccagttcggtccaatatgacataatctgggggagagagcagccctccaatccactaagatgaaagtgttgcaaaagagttacaagaa 31979611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30125998 - 30125937
Alignment:
Q  1 ccaagccaacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagata 61  Q
    |||||| ||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  30125998 ccaagctaactacaacaaaaacagccctagactagtgtagagcaaaaccacacaaagagata 30125937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 22708996 - 22709102
Alignment:
Q  88 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatg 184  Q
    |||||||||||||| ||||| | || |||||||||| ||||| |  |||||||  ||||||||||||||||||||||||||||||||| |||| |||| |    
T  22708996 aaaggaagaacaaacacaccaaaaa-attgttgacctagttcggttcaatatgatctaatctgggggagagagcagctctccaatccactatgatgaaag 22709094  T
Q  185 tgttacaa 192  Q
    ||||||||    
T  22709095 tgttacaa 22709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 205
Target Start/End: Complemental strand, 21801429 - 21801343
Alignment:
Q  122 ccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||||| || | | || |||||||||||| ||||||||||    
T  21801429 ccagttcagtccaatatgacctaatctgggggagcgagcagctctccaatccactaagataaaagtgttacaaaagagttacaagaa 21801343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 22963700 - 22963797
Alignment:
Q  110 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| |  ||||||| || ||||||||| |||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  22963700 aagattgttgacccagttcggtgcaatatgaccaaatctgggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 22963797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 23824693 - 23824596
Alignment:
Q  110 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| |  ||||||| || ||||||||| |||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  23824693 aagattgttgacccagttcggtgcaatatgaccaaatctgggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 23824596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 18232867 - 18232943
Alignment:
Q  131 ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||||| ||||||||||||||||||||| | ||||||| || |||| |||| |||||||||||| ||||||||||    
T  18232867 ccaatatgacctaatctgggggagagagcaaccctccaattcactatgatgaaagtgttacaaaagagttacaagaa 18232943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 31936587 - 31936651
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||| ||||| | |||||||| |||| |||||| ||||||||||||||||||||||    
T  31936587 aagattgttgacctagttcggtccaatatgacctagtctgggagagagagcagctctccaatcca 31936651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 5017566 - 5017482
Alignment:
Q  110 aagattgttgacccagttcagccaa-tatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaa 192  Q
    ||||||||||||||||||| | ||| |||| |||||||| |||||||||||| | |||||||| | |||| |||| |||||||||    
T  5017566 aagattgttgacccagttcggtcaaatatgacctaatctaggggagagagcaaccctccaatctactatgatgaaagtgttacaa 5017482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 12195515 - 12195575
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  12195515 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 12195575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 5273203 - 5273276
Alignment:
Q  101 aacaccgagaagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||| |||||  ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  5273203 aacactgagaaatttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 5273276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 4816231 - 4816291
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  4816231 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 4816291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 19704567 - 19704627
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  19704567 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 19704627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 20915356 - 20915416
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  20915356 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 20915416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 26932562 - 26932622
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||| | ||||||||||    
T  26932562 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcaaccctccaatcca 26932622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 29754709 - 29754769
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  29754709 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 29754769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 33309170 - 33309110
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  33309170 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 33309110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 173; Significance: 5e-93; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 44312816 - 44312613
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44312816 ccaagcaaacaacaacaaagccgccctagacaagtgtatagcaaaaccacacaaagagataccaaagca-aaacaagataagcgataaaaggaagaacaa 44312718  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  44312717 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 44312618  T
Q  201 aagaa 205  Q
    |||||    
T  44312617 aagaa 44312613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 39812180 - 39811972
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||| ||||||||    
T  39812180 ccaagccaacaacaacaaaacagccctaagctagtgtatagcaaaaccacacaa-gagattccaaagcacaaacaagataagcggtaaaagaaagaacaa 39812082  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  39812081 aacaccgagaagattgttgaaccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttac 39811982  T
Q  201 aagaatctag 210  Q
    |||| |||||    
T  39811981 aagactctag 39811972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 11099125 - 11098927
Alignment:
Q  7 caacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacac 105  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||||||||||    
T  11099125 caacaacaacaaaaacagccctagactagtgtagagcaaaaccacacaaagagataccaaagca-aaacaagataag-gaagaaaggaagaacaaaacac 11099028  T
Q  106 cgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaaga 204  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||    
T  11099027 caagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaaga 11098928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 32246677 - 32246889
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagc---gataaaaggaagaa 97  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    | |||||||||||    
T  32246677 ccaagctaacaacaacaaaacagtcctagactagtgtatagcaaaaccacac-aagagattccaaagcataaacaagataagcaagaaaaaaaggaagaa 32246775  T
Q  98 caaaacaccg-agaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagg 196  Q
    |||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  32246776 caaaacaccgaacaagattgttgaccttgttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaagg 32246875  T
Q  197 ttacaagaatctag 210  Q
    |||||||| |||||    
T  32246876 ttacaagactctag 32246889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 14291381 - 14291585
Alignment:
Q  1 ccaagccaacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaaca 99  Q
    |||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||||||||| ||||||| ||||||||||||| | ||| |||||||||    
T  14291381 ccaagcaaacaacaacaaaaacagccctagactaatgtagagcaaaaccacacaaagagataacaaagca-aaacaagataagcaagaaa-ggaagaaca 14291478  T
Q  100 aaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggtt 198  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  14291479 aaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggtt 14291578  T
Q  199 acaagaa 205  Q
    |||||||    
T  14291579 acaagaa 14291585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 9296605 - 9296401
Alignment:
Q  1 ccaagccaacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaaca 99  Q
    |||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||||| ||||||| |||||||| |||| | ||| |||||||||    
T  9296605 ccaagcaaacaacaacaaaaacagccctagtctagtgtagagcaaaaccacacaaagagataacaaagca-aaacaagaaaagcaagaaa-ggaagaaca 9296508  T
Q  100 aaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggtt 198  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  9296507 aaacaccaagaagattgttgacccagttcagccaatatggcctaatttgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggtt 9296408  T
Q  199 acaagaa 205  Q
    |||||||    
T  9296407 acaagaa 9296401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 19344313 - 19344523
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaac 98  Q
    |||||| ||||||||||||||||||  || ||| |||||||||||||||||| ||||| || ||| |||||  |||||||| ||||||||||||  ||||    
T  19344313 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaaggaaaagaac 19344409  T
Q  99 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-g 196  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19344410 aaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctaggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagag 19344509  T
Q  197 ttacaagaatctag 210  Q
    ||||||||||||||    
T  19344510 ttacaagaatctag 19344523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 19349171 - 19349381
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaac 98  Q
    |||||| ||||||||||||||||||  || ||| |||||||||||||||||| ||||| || ||| |||||  |||||||| ||||||||||||  ||||    
T  19349171 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaaggaaaagaac 19349267  T
Q  99 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-g 196  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19349268 aaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctaggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagag 19349367  T
Q  197 ttacaagaatctag 210  Q
    ||||||||||||||    
T  19349368 ttacaagaatctag 19349381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 25398395 - 25398592
Alignment:
Q  7 caacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaa-aca 104  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||||||| ||||   |||||||  |||||||||||| | ||| ||||||||||| |||    
T  25398395 caacaacaacaaaaacagccctagactagtgtagagcaacaccacacaa-gagaatacaaagca--aacaagataagcaagaaa-ggaagaacaaacaca 25398490  T
Q  105 ccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaag 203  Q
    || | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||||||    
T  25398491 ccaaaaagattgttgacccagttcagccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaag 25398590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 25403533 - 25403730
Alignment:
Q  7 caacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaa-aca 104  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||||||| ||||   |||||||  |||||||||||| | ||| ||||||||||| |||    
T  25403533 caacaacaacaaaaacagccctagactagtgtagagcaacaccacacaa-gagaatacaaagca--aacaagataagcaagaaa-ggaagaacaaacaca 25403628  T
Q  105 ccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaag 203  Q
    || | |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||||||    
T  25403629 ccaaaaagattgttgactcagttcagccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaag 25403728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 3491729 - 3491847
Alignment:
Q  88 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgt 185  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||    
T  3491729 aaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagt 3491827  T
Q  186 gttacaaaaggttacaagaa 205  Q
    |||||||| |||||||||||    
T  3491828 gttacaaagggttacaagaa 3491847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 8040060 - 8040147
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 195  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  8040060 aagattgttgacccagttcagtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 8040147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 40738822 - 40738926
Alignment:
Q  88 aaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgt 185  Q
    |||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||| |||| ||    
T  40738822 aaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatgacctaatctggggg-gagagcagctctccaatccactatgatgaaagt 40738919  T
Q  186 gttacaa 192  Q
    |||||||    
T  40738920 gttacaa 40738926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 13569331 - 13569426
Alignment:
Q  113 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  13569331 attgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 13569426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 21629944 - 21630041
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  21629944 aagattgttgacccagttcagtccaatatgacctaatctgggg-agagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 21630041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 28259274 - 28259177
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  28259274 aagattgttgacccagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 28259177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 10445541 - 10445443
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaata-tgtgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||| ||||||| | |||||||| |||||||||||||||||||||||||||||||||| || | |||| |||||||||||| ||||||||||    
T  10445541 aagattgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactattatgaaagtgttacaaaagagttacaagaa 10445443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 17865203 - 17865301
Alignment:
Q  110 aagattgttgacccagttcagcc-aatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||||||||| | |||||||||| |||| |||| |||||||||||| ||||||||||    
T  17865203 aagattgttgacccagttcagtcgaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 17865301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 20522220 - 20522318
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaa-ggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||| | |||||||||| |||| |||| ||||||||||| |||||||||||    
T  20522220 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagggttacaagaa 20522318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 34682431 - 34682333
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatat-gtgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||||| |||  |||| |||||||||||| ||||||||||    
T  34682431 aagattgttgacccagttcggtccaatatgacataatctgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaa 34682333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 34388859 - 34388956
Alignment:
Q  111 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||||||||||| ||| | |||||||| ||||||||||||||||||| |||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  34388859 agattgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 34388956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 14699104 - 14699007
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| |||| |||| | |||||||||| ||||||||||    
T  14699104 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaag-gttacaaaagagttacaagaa 14699007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 25407653 - 25407719
Alignment:
Q  140 cctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    |||||||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  25407653 cctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 25407719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 10707348 - 10707251
Alignment:
Q  111 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||||||||||||||| | |||||||| |||||| ||||||||||| || |||||||||||| |||| |||| |||||||||||| ||||||||||    
T  10707348 agattgttgacccagttcggtccaatatgacctaatatgggggagagaacaactctccaatccactatgatgaaagtgttacaaaagagttacaagaa 10707251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 8390244 - 8390149
Alignment:
Q  113 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||||||||||||| | |||| ||| |||||| ||||||||||||||||||||||||||| |||| |||| |||||| ||||| ||||||||||    
T  8390244 attgttgacccagttcggtccaaaatgacctaatttgggggagagagcagctctccaatccactatgatgaaagtgttaaaaaagagttacaagaa 8390149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 31056044 - 31056131
Alignment:
Q  110 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 195  Q
    ||||||||||||| ||||| |  ||||||| |||||||| ||||||||||||||||||||||||| || | |||| ||||||||||||    
T  31056044 aagattgttgacctagttcggttcaatatgacctaatctaggggagagagcagctctccaatccactaagatgaaagtgttacaaaag 31056131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 33528718 - 33528620
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||| ||||  |||||||| | |||||||||| |||| |||| |||||||||||| ||||||||||    
T  33528718 aagattgttgacccagttcggtccaatatgacctaatatgggaaagagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 33528620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 39482931 - 39483029
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||| ||||| | |||||||| |||||| |||||||||||||||  |||||||||| |||| ||||  ||||||||||| ||||||||||    
T  39482931 aagattgttgacctagttcggtccaatatgacctaatatgggggagagagcaggcctccaatccactatgatgaaaatgttacaaaagagttacaagaa 39483029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 23078567 - 23078470
Alignment:
Q  110 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    |||| |||||||||||||| | |||||||| |||||| ||||||||||| || |||||||||||| |||| |||| |||||| |||  ||||||||||    
T  23078567 aagaatgttgacccagttcgatccaatatgacctaatatgggggagagaacaactctccaatccactatgatgaaagtgttagaaagagttacaagaa 23078470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 42039766 - 42039669
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||| | ||||| | |||||||| ||||||||| ||||||||||||||||| |||||| |||| |||| ||||||| ||  ||||||||||    
T  42039766 aagattgttgatctagttcggtccaatatgacctaatctgtgggagagagcagctctctaatccactatgatgaaagtgttacgaagagttacaagaa 42039669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 16940306 - 16940219
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 195  Q
    ||||||||||||||| ||| | |||||||| | |||||||||||| ||| |||| |||||||||| |||| |||| ||||||||||||    
T  16940306 aagattgttgacccaattcggtccaatatgacataatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaag 16940219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 17010971 - 17010884
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 195  Q
    ||||||||||||||| ||| | |||||||| | |||||||||||| ||| |||| |||||||||| |||| |||| ||||||||||||    
T  17010971 aagattgttgacccaattcggtccaatatgacataatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaag 17010884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 2838136 - 2838063
Alignment:
Q  100 aaacaccgagaagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||| |||| |||||||||||||||| | |||||||| |||| ||||||||||||||||  |||||||||||    
T  2838136 aaacaccaagaa-attgttgacccagttcggtccaatatgacctactctgggggagagagcacatctccaatcca 2838063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 33118136 - 33118222
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaa 194  Q
    |||||||||| | |||||| | |||||||| |||||| |||||||||||||||| |||||||||| |||| |||| | |||||||||    
T  33118136 aagattgttggctcagttcggtccaatatgacctaatttgggggagagagcagccctccaatccactatgatgaaagagttacaaaa 33118222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 1345635 - 1345574
Alignment:
Q  113 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    |||||||||||||||| | |||||||| |||| |||||||||||||||| |||||| |||||    
T  1345635 attgttgacccagttcggtccaatatgacctactctgggggagagagcacctctccgatcca 1345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 36757859 - 36757790
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg 178  Q
    ||||||||||||||| ||| | |||||||| ||||||||||||| || | ||||||||||||||| ||||    
T  36757859 aagattgttgacccaattcggtccaatatgacctaatctgggggggataacagctctccaatccagtatg 36757790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 35215586 - 35215646
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  35215586 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 35215646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 35217963 - 35218023
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  35217963 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 35218023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 27149369 - 27149327
Alignment:
Q  131 ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    |||||||| |||| | |||||||||||||||||||||||||||    
T  27149369 ccaatatgacctactatgggggagagagcagctctccaatcca 27149327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 2869787 - 2869726
Alignment:
Q  113 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    |||||| ||||||||| | |||||||| |||| ||| |||||||||| ||||||||||||||    
T  2869787 attgtttacccagttcggtccaatatgacctactctaggggagagagtagctctccaatcca 2869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 45332181 - 45332238
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaat 170  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||||||    
T  45332181 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaat 45332238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 23452237 - 23452297
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  23452237 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 23452297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 36558864 - 36558924
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  36558864 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 36558924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 36561141 - 36561201
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  36561141 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 36561201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 12396804 - 12397007
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  12396804 ccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacacaaagagataccaaagca-aaacaagataagcggtaaagggaagaacaa 12396902  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  12396903 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagaacagctctccaatccaatatgagaaagtgttacaaaaggttac 12397002  T
Q  201 aagaa 205  Q
    |||||    
T  12397003 aagaa 12397007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 12406224 - 12406427
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||    
T  12406224 ccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacacaaagagataccaaagca-aaacaagataagcggtaaaagaaagaacaa 12406322  T
Q  101 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||||||    
T  12406323 aacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagaatagctctccaatccaatatgagaaagtgttacaaaaggttac 12406422  T
Q  201 aagaa 205  Q
    |||||    
T  12406423 aagaa 12406427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 4866622 - 4866820
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaa-ccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaaca 99  Q
    |||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  4866622 ccaagcaaacaacaacaaaacagtcctagactagtgtatagcaaaaaccacacaaaaagataccaaagca-aaacaagataagcggtaaaaggaagaaca 4866720  T
Q  100 aaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  4866721 aaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggtta 4866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 31109775 - 31109567
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| | | ||||||||||||||    
T  31109775 ccaagccaacaacaacaaaacagcccta-actagtgtatagcaaaaccacacaa-gagattccaaagcataaacaagataaacaagaaaaggaagaacaa 31109678  T
Q  101 aacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtta 199  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  31109677 aacaccgaacaagattgttgacccagttcagccaatatggcctaatctaggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggtta 31109578  T
Q  200 caagaatctag 210  Q
    ||||| |||||    
T  31109577 caagactctag 31109567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 20357751 - 20357548
Alignment:
Q  1 ccaagccaacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaaca 99  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||  |||||||||||| | |||||||||||||    
T  20357751 ccaagctaacaacaacaaaaacagccctagactagtgtagagcaaaaccacacaaagagataacaaagca--aacaagataagcaagaaaaggaagaaca 20357654  T
Q  100 aaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtta 199  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||| |||||    
T  20357653 aaataccaagaagattgttgacccagttcagccaatatggcctaatttgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggtta 20357554  T
Q  200 caagaa 205  Q
    ||||||    
T  20357553 caagaa 20357548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 210
Target Start/End: Original strand, 19992213 - 19992414
Alignment:
Q  9 acaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccg 107  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||||| || ||| ||||||||||||||| || ||||||||| |||||||||||||    
T  19992213 acaacaacaaa-cagccctaagctagtgtatagcaaaaccacacaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacaaaacaccg 19992310  T
Q  108 ag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaat 206  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  19992311 agcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagact 19992410  T
Q  207 ctag 210  Q
    ||||    
T  19992411 ctag 19992414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 2057852 - 2058062
Alignment:
Q  1 ccaagccaacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaa----caagataagcgataaaaggaag 95  Q
    |||||| ||||||||||||| | |||||||||| || || |||||||||||||||||||||||||||||| |||    |||||||||| |||||||||||    
T  2057852 ccaagcaaacaacaacaaaaaccgccctagacttgtttagagcaaaaccacacaaagagataccaaagcaaaaaaaaacaagataagcaataaaaggaag 2057951  T
Q  96 aacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaa 194  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||     
T  2057952 aacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaag 2058051  T
Q  195 ggttacaagaa 205  Q
    |||||||||||    
T  2058052 ggttacaagaa 2058062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 24024520 - 24024310
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| ||||||||||||||||||   ||||||| |||||||||||||||||||||| || ||| ||||||||||||||||| | ||||||||||||||    
T  24024520 ccaagcaaacaacaacaaaacagcctatgactagtatatagcaaaaccacacaaagagctaacaa-gcataaacaagataagcaagaaaaggaagaacaa 24024422  T
Q  101 aa-caccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtt 198  Q
    || ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||    
T  24024421 aaacaccgaacaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaatgtt 24024322  T
Q  199 acaagaatctag 210  Q
    |||||| |||||    
T  24024321 acaagactctag 24024310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 21812431 - 21812223
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaaca 99  Q
    |||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||| || ||| ||||||||||||||| || |||||| || |||||    
T  21812431 ccaagctaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacacaaagagttaacaa-gcataaacaagataaacggtaaaagaaaagaaca 21812334  T
Q  100 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtt 198  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||    
T  21812333 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctttccaatccaatatgtgaa-gtcttacaaaaggtt 21812235  T
Q  199 acaagaatctag 210  Q
     ||||| |||||    
T  21812234 ccaagactctag 21812223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 10 - 210
Target Start/End: Complemental strand, 24261506 - 24261306
Alignment:
Q  10 caacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccg 107  Q
    ||||||||||||||||  || ||| |||| |||||| |||||| ||||| || ||| |||||  |||||||| ||||||||| ||  ||||||||||||     
T  24261506 caacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacacca 24261411  T
Q  108 ag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaa 205  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24261410 agcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa 24261311  T
Q  206 tctag 210  Q
    |||||    
T  24261310 tctag 24261306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 10 - 210
Target Start/End: Complemental strand, 24266385 - 24266185
Alignment:
Q  10 caacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccg 107  Q
    ||||||||||||||||  || ||| |||| |||||| |||||| ||||| || ||| |||||  |||||||| ||||||| | ||  ||||||||||||     
T  24266385 caacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaa-gcata--caagataaacgataaaggaaaacgaacaaaacacca 24266290  T
Q  108 ag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaa 205  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24266289 agcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa 24266190  T
Q  206 tctag 210  Q
    |||||    
T  24266189 tctag 24266185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 10 - 210
Target Start/End: Original strand, 16879975 - 16880174
Alignment:
Q  10 caacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccg 107  Q
    ||||||||||||||||  || ||| |||| |||||| |||||| ||||| || ||| |||||  |||||||| ||||||||| ||  ||||||||||||     
T  16879975 caacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacacca 16880070  T
Q  108 ag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaat 206  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  16880071 agcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgttttacaaagagttacaagaat 16880170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 10 - 210
Target Start/End: Original strand, 16884831 - 16885030
Alignment:
Q  10 caacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccg 107  Q
    ||||||||||||||||  || ||| |||| |||||| |||||| ||||| || ||| |||||  |||||||| ||||||||| ||  ||||||||||||     
T  16884831 caacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacacca 16884926  T
Q  108 ag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaat 206  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  16884927 agcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgttttacaaagagttacaagaat 16885026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 21639710 - 21639905
Alignment:
Q  7 caacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaa-aca 104  Q
    |||||||||||||| ||||||||| |||||||| ||||| ||||||   |||||   |||||||  |||||||||||| | ||| ||||||||||| |||    
T  21639710 caacaacaacaaaaacagccctagtctagtgtagagcaacaccaca---agagaatacaaagca--aacaagataagcaagaaa-ggaagaacaaacaca 21639803  T
Q  105 ccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatat-gtgaatgtgttacaaaaggttacaag 203  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||| |||||||||| |||||||||    
T  21639804 ccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactataatgaaagtgttacaaagggttacaag 21639903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 1533640 - 1533444
Alignment:
Q  7 caacaacaacaaaac-agccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaa-aca 104  Q
    ||||||||||||||| ||||| || |||||||| ||||| ||||||  ||||||   |||||||  ||||| |||||| | ||| | ||||||||| |||    
T  1533640 caacaacaacaaaaccagccccagtctagtgtagagcaacaccaca--aagagaatacaaagca--aacaatataagcaagaaa-gaaagaacaaacaca 1533546  T
Q  105 ccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaag 203  Q
    || | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| |||||||||    
T  1533545 ccaataagattgttgacccagttcagccaatatggcctaatctgggggagagagcatctctccaatccaatatgatgaaagtgttacaaagggttacaag 1533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 18408666 - 18408860
Alignment:
Q  7 caacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaa-aca 104  Q
    |||||||||||||| ||||| ||| |||||||| ||||| ||||||  || | |||| ||||||  |||||||||||| | ||| | ||||||||| |||    
T  18408666 caacaacaacaaaaacagccgtagtctagtgtagagcaacaccaca--aacaaatac-aaagca--aacaagataagcaagaaa-gaaagaacaaacaca 18408759  T
Q  105 ccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaag 203  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||||||    
T  18408760 ccaa-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccagtatgatgaaagtgttacaaagggttacaag 18408858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 21645908 - 21646103
Alignment:
Q  7 caacaacaacaaaa-cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaa-aca 104  Q
    |||||||||||||| ||||||||| |||||||| ||||| ||||||   |||||   |||| ||  |||||||||||| | ||| ||||||||||| |||    
T  21645908 caacaacaacaaaaacagccctagtctagtgtagagcaacaccaca---agagaatacaaaaca--aacaagataagcaagaaa-ggaagaacaaacaca 21646001  T
Q  105 ccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaag 203  Q
    || | |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| |||| |||||| ||| |||||||||    
T  21646002 ccaaaaagattgttgacccagttcagccaatatggcctaatctagggaagagagcagctctccaatccactatgatgaaagtgttaaaaagggttacaag 21646101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 18413641 - 18413736
Alignment:
Q  110 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  18413641 aagattgttgacccagttcagccaatatggcctaatct-ggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 18413736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 29159803 - 29159901
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  29159803 aagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 29159901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 21983285 - 21983370
Alignment:
Q  111 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaa 194  Q
    |||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| |||||||||||    
T  21983285 agattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaa 21983370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 46516407 - 46516309
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||| |||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  46516407 aagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 46516309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 49091661 - 49091759
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||||||||||||||| || |||||||| |||||||||||| |||||||| |||||||||||| |||| |||| |||||||||||| ||||||||||    
T  49091661 aagattgttgacccagtttagtccaatatgacctaatctggggaagagagcaactctccaatccactatgatgaaagtgttacaaaagagttacaagaa 49091759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 44848781 - 44848684
Alignment:
Q  110 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| |  ||||||| ||||| |||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  44848781 aagattgttgacccagttcggttcaatatgacctaacctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 44848684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 2647793 - 2647695
Alignment:
Q  110 aagattgttgacccagttcagcc-aatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||| ||| ||| |||||| |||| |||||||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  2647793 aagattgttgacccaattcggcccaatatgacctattctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 2647695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 33332547 - 33332449
Alignment:
Q  110 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | | |||||| ||||||||||||||||||||||| |||||||||| || | |||| |||||||||||| ||||||||||    
T  33332547 aagattgttgacccagttcgatctaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaaaagagttacaagaa 33332449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 9190105 - 9190008
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||| || | |||| |||||||||   ||||||||||    
T  9190105 aagattgttgacccagttcggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttacaatgagttacaagaa 9190008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 20284089 - 20284186
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| || | |||| |||||||||   ||||||||||    
T  20284089 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaatgcgttacaagaa 20284186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 55948 - 56045
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||| |||||||||||| | |||||||| |||||||||||| |||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  55948 aagattattgacccagttcggtccaatatgacctaatctgggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 56045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 2580390 - 2580487
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||| ||| | |||||||| |||| ||||||||||||||||||||||||||||| || | |||| |||||||||   ||||||||||    
T  2580390 aagattgttgacccaattcggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttacaatgagttacaagaa 2580487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 28617319 - 28617258
Alignment:
Q  113 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    |||||| ||||||||| | |||||||| |||| |||||||||||||||||||||||||||||    
T  28617319 attgtttacccagttcggtccaatatgacctactctgggggagagagcagctctccaatcca 28617258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 35960816 - 35960901
Alignment:
Q  110 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaa 193  Q
    ||||||||||||| ||||| |  ||||||| ||||||||||||||||||||||| |||||| ||| |||| |||| ||||||||||    
T  35960816 aagattgttgaccgagttcggttcaatatgacctaatctgggggagagagcagccctccaaaccactatgatgaaagtgttacaaa 35960901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 9185262 - 9185198
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||||||| | |||||||  |||| |||||||||||||| ||||||||||||||    
T  9185262 aagattgttgacccagttcggtccaatataacctagtctgggggagagagaagctctccaatcca 9185198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 4796764 - 4796666
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||| ||||||||| | |||| ||| |||||||||||||||| |||||| ||| |||||| |||| ||||  ||||||||||| ||||||||||    
T  4796764 aagattgttaacccagttcggtccaaaatgacctaatctgggggagaaagcagccctcaaatccactatgatgaaattgttacaaaagagttacaagaa 4796666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 47263678 - 47263745
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg 178  Q
    ||||||||||||||||||| | |||||||| |||||| |||||||||  |||||||||||||||| ||||    
T  47263678 aagattgttgacccagttcggtccaatatgacctaatatgggggaga--gcagctctccaatccactatg 47263745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 2479337 - 2479421
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaa 193  Q
    ||||||||||||||||||| |  ||||||| |||||||| |||| ||||||||||||| |||||| |||| |||| ||||||||||    
T  2479337 aagattgttgacccagttcggttcaatatgacctaatctagggg-gagagcagctctcaaatccactatgatgaaagtgttacaaa 2479421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 31155911 - 31155971
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  31155911 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 31155971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 21988909 - 21988992
Alignment:
Q  111 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaa 194  Q
    |||||||||||||||||| | |||||||| |||||||||| |  ||||||| |||||||||||| | || |||| |||||||||||    
T  21988909 agattgttgacccagttcggtccaatatgacctaatctggag--gagagcaactctccaatccactttgatgaaagtgttacaaaa 21988992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 1049296 - 1049356
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  1049296 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 1049356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 2935557 - 2935497
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  2935557 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 2935497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 3036013 - 3035953
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  3036013 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 3035953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 5817366 - 5817303
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||| || |||||| | |||||||| |||| ||||||| |||||||||||||||||||||    
T  5817366 aagattgttaactcagttcggtccaatatgacctactctgggg-agagagcagctctccaatcca 5817303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 7351652 - 7351712
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| | |||||||||||||||| ||||||||||    
T  7351652 ttgttgacccagttcggtccaatctgacctagtatgggggagagagcagccctccaatcca 7351712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 8153514 - 8153466
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagaga 157  Q
    ||||||||||||||||||||| ||||  || ||||||||||||||||||    
T  8153514 aagattgttgacccagttcagtccaacttgacctaatctgggggagaga 8153466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 9027194 - 9027254
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  9027194 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctcctatcca 9027254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 22108355 - 22108295
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  22108355 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 22108295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 22137366 - 22137306
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  22137366 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 22137306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 40550115 - 40550055
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  40550115 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 40550055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 40552393 - 40552333
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  40552393 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 40552333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 4e-78; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 7 - 210
Target Start/End: Original strand, 41398139 - 41398337
Alignment:
Q  7 caacaacaacaaaacagccctagactagtgtatagcaaaa--ccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaaca 104  Q
    |||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||      ||||||||||||||||    
T  41398139 caacaacaacaaaacagcccta-actagtgtatagcaaaaaaccacacaaagagataccaaagcataaacaagataag------aaggaagaacaaaaca 41398231  T
Q  105 ccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaaga 204  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  41398232 ccgagaagattgttgacccaggtcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga 41398331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 39445392 - 39445600
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaaca 99  Q
    |||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||| || ||| ||||||||||||||| || ||||||||| |||||    
T  39445392 ccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacacaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaaca 39445489  T
Q  100 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtt 198  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39445490 aaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggtt 39445588  T
Q  199 acaagaatctag 210  Q
    |||||| |||||    
T  39445589 acaagactctag 39445600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 8 - 210
Target Start/End: Original strand, 41390485 - 41390682
Alignment:
Q  8 aacaacaacaaaacagccctagactagtgtatagcaaaa--ccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacac 105  Q
    ||||||||||||||||||||| |||||||||||||||||  ||||||||||||||| ||||||||||||||||||||      ||||||||||||||||     
T  41390485 aacaacaacaaaacagcccta-actagtgtatagcaaaaaaccacacaaagagatatcaaagcataaacaagataag------aaggaagaacaaaacat 41390577  T
Q  106 cgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 205  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||     
T  41390578 cgagaagattgttgacccagatcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagac 41390677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 24787560 - 24787365
Alignment:
Q  7 caacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacacc 106  Q
    ||||||||| ||||||||||||||||  |||| |||||||||||||||||||||| |||||||  |||||||||||| | ||||||||||||||||||||    
T  24787560 caacaacaa-aaaacagccctagacttatgtagagcaaaaccacacaaagagataacaaagca--aacaagataagcaagaaaaggaagaacaaaacacc 24787464  T
Q  107 gagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  24787463 aagaagattgttgacccagttcagccaatatggcctaatctgggggggagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaa 24787365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 25445282 - 25445073
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaaca 99  Q
    |||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||| || ||| || |||||||||||| || ||||||||| |||||    
T  25445282 ccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacacaaagagctaacaa-gcgtaaacaagataaacggtaaaaggaaagaaca 25445185  T
Q  100 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtt 198  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  25445184 aaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggtt 25445085  T
Q  199 acaagaatctag 210  Q
    |||||| |||||    
T  25445084 acaagactctag 25445073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 44024065 - 44023858
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||| || ||| |||||||||||||||  | |||| | ||||||||    
T  44024065 ccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacacaaagagctaacaa-gcataaacaagataaatggtaaaggaaagaacaa 44023968  T
Q  101 aacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtta 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44023967 aacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggtta 44023869  T
Q  200 caagaatctag 210  Q
    ||||| |||||    
T  44023868 caagactctag 44023858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 210
Target Start/End: Complemental strand, 1055196 - 1054996
Alignment:
Q  9 acaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaacaaaacaccg 107  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||||| || ||| ||||||||||||||| || ||||||||| |||||||||||||    
T  1055196 acaacaacaaa-cagccctaagctagtgtatagcaaaaccacacaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacaaaacaccg 1055099  T
Q  108 ag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaat 206  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |    
T  1055098 agcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcaactctccaatccaatatgtgaa-gtgttacaaaaggttacaagact 1055000  T
Q  207 ctag 210  Q
    ||||    
T  1054999 ctag 1054996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 24202969 - 24202769
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaa 100  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||| ||||||   |||||   |||||||  |||||||||||| | ||| ||||||||||    
T  24202969 ccaagcaaacaacaacaaaacagccctaaactagtgtagagcaacaccaca---agagaatacaaagca--aacaagataagcaagaaa-ggaagaacaa 24202876  T
Q  101 a-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggtt 198  Q
    | ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| ||||    
T  24202875 acacaccaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggtt 24202776  T
Q  199 acaagaa 205  Q
    |||||||    
T  24202775 acaagaa 24202769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 43988658 - 43988447
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataag-cgataaaaggaa--gaa 97  Q
    |||||| ||||||||||||||||||  || ||| ||||||||| |||||||| ||||| || ||| |||||  ||||||||  | || ||| |||  |||    
T  43988658 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcacaaccacactaagagctaacaa-gcata--caagataaaaccatgaaaagaaaagaa 43988562  T
Q  98 caaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag- 195  Q
    ||||||||| || ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  43988561 caaaacaccaagcaagattgtttacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaga 43988462  T
Q  196 gttacaagaatctag 210  Q
    |||||||||||||||    
T  43988461 gttacaagaatctag 43988447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 19361564 - 19361432
Alignment:
Q  74 caagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 172  Q
    |||||||||| | ||||||||||||||| ||||| | ||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  19361564 caagataagcaagaaaaggaagaacaaacacaccaa-aagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatcc 19361466  T
Q  173 aatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    | |||| |||| |||||||||| |||||||||||    
T  19361465 actatgatgaaagtgttacaaagggttacaagaa 19361432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 19380204 - 19380072
Alignment:
Q  74 caagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 172  Q
    |||||||||| | ||||||||||||||| ||||| | ||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  19380204 caagataagcaagaaaaggaagaacaaacacaccaa-aagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatcc 19380106  T
Q  173 aatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    | |||| |||| |||||||||| |||||||||||    
T  19380105 actatgatgaaagtgttacaaagggttacaagaa 19380072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 19358975 - 19358843
Alignment:
Q  74 caagataagcgataaaaggaagaacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatcc 172  Q
    |||||||||| | ||||||||||||||| ||| | | ||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  19358975 caagataagcaagaaaaggaagaacaaacacatcaa-aagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatcc 19358877  T
Q  173 aatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    | |||| |||| |||||||||| |||||||||||    
T  19358876 actatgatgaaagtgttacaaagggttacaagaa 19358843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 26644994 - 26644897
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  26644994 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccattatgatgaaagtgttacaaagagttacaagaa 26644897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 47704033 - 47703946
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 195  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  47704033 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 47703946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 19072928 - 19073026
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| || | |||| |||||||||||| ||||||||||    
T  19072928 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaa 19073026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 19120818 - 19120916
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| || | |||| |||||||||||| ||||||||||    
T  19120818 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaa 19120916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 16124613 - 16124515
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||||||||| |||||| | |||||||| ||||||||||||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  16124613 aagattgttgactcagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 16124515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 27104469 - 27104371
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||||||||| |||||| | |||||||  |||||||||||||||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  27104469 aagattgttgacacagttcggtccaatataacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 27104371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 3281708 - 3281805
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    |||||| |||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||  ||| |||| ||||||||||  ||||||||||    
T  3281708 aagattattgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccacgatgatgaaagtgttacaaagagttacaagaa 3281805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 9476261 - 9476348
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 195  Q
    ||||||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||||||| |||| |||| || |||||||||    
T  9476261 aagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtattacaaaag 9476348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 13598398 - 13598485
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 195  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| || ||||||| |||| |||| ||||||||||||    
T  13598398 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaag 13598485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 29651811 - 29651898
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 195  Q
    |||||| |||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||| |||| |||| ||||||||||||    
T  29651811 aagatttttgacccagttcggtccaatatgacctaatctgggggagagagcagcactccaatccactatgatgaaagtgttacaaaag 29651898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 37069770 - 37069864
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaa 202  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||| |||||| ||||| |||| |||| ||||||||||  |||||||    
T  37069770 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcatctctccgatccactatgatgaaagtgttacaaagagttacaa 37069864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 775672 - 775759
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 195  Q
    ||||||||||||||| ||| | |||||||| ||||||||||||||||||| |||||||||||||| || | |||| ||||||||||||    
T  775672 aagattgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctccaatccactaagatgaaagtgttacaaaag 775759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 205
Target Start/End: Complemental strand, 21536702 - 21536569
Alignment:
Q  75 aagataagcgataaaaggaag-aacaaa-acaccgagaagattgttgacccagttcagccaata-tggcctaatctgggggagagagcagctctccaatc 171  Q
    |||||||||||| |||| ||| |||||| ||||| | ||||||||||||||||||| |  || | || ||||||||||||||||||||||||||||||||    
T  21536702 aagataagcgatgaaagaaaggaacaaacacaccaa-aagattgttgacccagttcggtaaaaaatgacctaatctgggggagagagcagctctccaatc 21536604  T
Q  172 caatat-gtgaatgtgttacaaaaggttacaagaa 205  Q
    || |||  |||| ||||||||||  ||||||||||    
T  21536603 cactataatgaaagtgttacaaagagttacaagaa 21536569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 13604720 - 13604623
Alignment:
Q  110 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||  |  ||||||| |||||| ||||||||||||||||||||||||||| |||| ||||  |||||||||  ||||||||||    
T  13604720 aagattgttgacccagttaggttcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaaatgttacaaagagttacaagaa 13604623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 47098921 - 47098824
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| || |||||||||||||||||||| |||||||||| || | |||| |||||||||   ||||||||||    
T  47098921 aagattgttgacccagttcggtccaatatgaccgaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaatgagttacaagaa 47098824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 32889439 - 32889536
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||| | ||||| | |||||||| |||| ||||||||| ||||||||||||||||||| || | |||| |||||||||   ||||||||||    
T  32889439 aagattgttgatctagttcggtccaatatgacctagtctgggggatagagcagctctccaatccactaagatgaaagtgttacaatgagttacaagaa 32889536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 47102935 - 47102874
Alignment:
Q  113 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    |||||||||||||||| | |||||||| |||||||| ||||||||||||||  |||||||||    
T  47102935 attgttgacccagttcggtccaatatgacctaatctaggggagagagcagccatccaatcca 47102874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 9459419 - 9459479
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  9459419 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 9459479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 9463246 - 9463306
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  9463246 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 9463306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 16226446 - 16226386
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  16226446 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 16226386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 23786118 - 23786058
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  23786118 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 23786058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 51752642 - 51752582
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||  || |||| |||||||||||||||||| ||||||||||    
T  51752642 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagccctccaatcca 51752582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 255 - 463
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa-gaaca 99  Q
    |||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||| || ||| ||||||||||||||| || ||||||||| |||||    
T  255 ccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacacaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaaca 352  T
Q  100 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggtt 198  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  353 aaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggtt 451  T
Q  199 acaagaatctag 210  Q
    |||||| |||||    
T  452 acaagactctag 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 139; Significance: 9e-73; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 8 - 210
Target Start/End: Complemental strand, 9825 - 9626
Alignment:
Q  8 aacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacaccg 107  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||| ||| || ||| ||||||||||||||||| | ||| |||||||||||||||||    
T  9825 aacaacaacaaaacagccctaagctagtatatagcaaaaccacacaa-gagctaacaa-gcataaacaagataagcaagaaa-ggaagaacaaaacaccg 9729  T
Q  108 agaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||    
T  9728 agaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactc 9629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 72 - 1
Alignment:
Q  8 aacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagc 83  Q
    |||||||||||||||||||||  ||||||||||||||||||||||   ||| || | |||||||||||||||||||    
T  72 aacaacaacaaaacagccctaagctagtgtatagcaaaaccacac---gagctaac-aagcataaacaagataagc 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 2443 - 2234
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaac 98  Q
    |||||| ||||||||||||||||||  || ||| |||||||||||||||||| ||||| || ||| |||||  |||||||| ||||||| | ||  ||||    
T  2443 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaggaaaacgaac 2347  T
Q  99 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-g 196  Q
    ||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  2346 aaa-caccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagag 2248  T
Q  197 ttacaagaatctag 210  Q
    ||||||||||||||    
T  2247 ttacaagaatctag 2234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 149148 - 148939
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaac 98  Q
    |||||| ||||||||||||||||||  || ||| |||||||||||||||||| ||||| || ||| |||||  |||||||| ||||||| | ||  ||||    
T  149148 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaggaaaacgaac 149052  T
Q  99 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-g 196  Q
    ||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  149051 aaa-caccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagag 148953  T
Q  197 ttacaagaatctag 210  Q
    ||||||||||||||    
T  148952 ttacaagaatctag 148939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 104; Significance: 7e-52; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 19357 - 19148
Alignment:
Q  1 ccaagccaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaac 98  Q
    |||||| ||||||||||||||||||  || ||| |||||||||||||||||| ||||| || ||| |||||  |||||||| ||||||||| ||  ||||    
T  19357 ccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaac 19261  T
Q  99 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-g 196  Q
    ||| ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |    
T  19260 aaa-caccgagcaagattgttgacccagttcagccattgtggcctaatctgggggagagagcagctctccaatacaatatgtgagtgtgttacaaaagag 19162  T
Q  197 ttacaagaatctag 210  Q
    ||||||||||||||    
T  19161 ttacaagaatctag 19148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 10 - 210
Target Start/End: Complemental strand, 14492 - 14292
Alignment:
Q  10 caacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccg 107  Q
    ||||||||||||||||  || ||| |||| |||||| |||||| ||||| || ||| |||||  |||||||| ||||||||| ||  ||||||||||||     
T  14492 caacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacacca 14397  T
Q  108 ag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaa 205  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14396 agcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa 14297  T
Q  206 tctag 210  Q
    |||||    
T  14296 tctag 14292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 18148 - 17952
Alignment:
Q  7 caacaacaacaaaa--cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaa-ac 103  Q
    ||||||||||||||  |||||||||||||||||| ||||| ||||||   |||||   |||||||  |||||||||||| | ||| ||||||||||| ||    
T  18148 caacaacaacaaaaaccagccctagactagtgtagagcaacaccaca---agagaatacaaagca--aacaagataagcaagaaa-ggaagaacaaacac 18055  T
Q  104 accgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaa 202  Q
    ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| ||||||||    
T  18054 accaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaa 17955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 24241 - 24045
Alignment:
Q  7 caacaacaacaaaa--cagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaa-ac 103  Q
    ||||||||||||||  |||||||||||||||||| ||||| ||||||   |||||   ||||| |  |||||||||||  | ||| ||||||||||| ||    
T  24241 caacaacaacaaaaaccagccctagactagtgtagagcaacaccaca---agagaatacaaagaa--aacaagataagaaagaaa-ggaagaacaaacac 24148  T
Q  104 accgagaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaa 202  Q
    ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| ||||||||    
T  24147 accaaaaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaa 24048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 10 - 185
Target Start/End: Complemental strand, 182147 - 181973
Alignment:
Q  10 caacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaa--gaacaaaacaccg 107  Q
    ||||||||||||||||  || ||| |||| |||||| |||||| ||||| || ||| |||||  |||||||| ||||||||| ||  ||||||||||||     
T  182147 caacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacacca 182052  T
Q  108 ag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaatgt 185  Q
    || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  182051 agcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgt 181973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 432 - 300
Alignment:
Q  7 caacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcataaacaagataagcgataaaaggaagaacaaaacacc 106  Q
    ||||||||| |||||||||||| |||||||   ||||||||||||||||||||||  |||||| ||||||||||||| | ||| | ||||||||||||||    
T  432 caacaacaa-aaaacagccctaaactagtgaggagcaaaaccacacaaagagataataaagca-aaacaagataagctagaaa-gaaagaacaaaacacc 336  T
Q  107 gagaagattgttgacccagttcagccaatatggcct 142  Q
     ||||||||||||||| |||||||||||||||||||    
T  335 aagaagattgttgacctagttcagccaatatggcct 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 8516 - 8419
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  8516 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 8419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 22403 - 22343
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  22403 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 22343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 24678 - 24618
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||| |||||    
T  24678 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccgatcca 24618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 85684 - 85780
Alignment:
Q  111 agattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||  ||| |||| ||||||||||  ||||||||||    
T  85684 agattgttgacccagttcagtccaatatgacctaatctgggggagagagcggctctccaatccaccatgatgaaagtgttacaaagagttacaagaa 85780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 44058 - 43961
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||| | ||||||||  ||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  44058 aagattgttgacccagttcggtccaatatgatctattctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 43961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 205
Target Start/End: Complemental strand, 36965 - 36832
Alignment:
Q  75 aagataagcgataaaaggaag-aacaaa-acaccgagaagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatc 171  Q
    ||||||||| ||||||| ||| |||||| ||||| | ||||||||||||||||||| | |||||||| |||||||| ||| |||||||||||| |||| |    
T  36965 aagataagcaataaaagaaaggaacaaacacaccaa-aagattgttgacccagttcggtccaatatgacctaatctagggaagagagcagctcgccaacc 36867  T
Q  172 caatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    || |||| |||| ||||||||||  ||||||||||    
T  36866 cactatgatgaaagtgttacaaagagttacaagaa 36832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 5683 - 5770
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 195  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| || ||||||| |||| |||| ||||||||||||    
T  5683 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaag 5770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 2492 - 2579
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 195  Q
    |||||||||||||||||||   |||||||| |||||||||||||||| |||||| |||||||||| |||| |||| ||||||||||||    
T  2492 aagattgttgacccagttcgctccaatatgacctaatctgggggagacagcagccctccaatccactatgatgaaagtgttacaaaag 2579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 133377 - 133280
Alignment:
Q  110 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 205  Q
    ||||||||||||||||||  |  ||||||| |||||| ||||||||||||||||||||||||||| |||| ||||  |||||||||  ||||||||||    
T  133377 aagattgttgacccagttaggttcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaaatgttacaaagagttacaagaa 133280  T

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Target: scaffold0148 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 10729 - 10827
Alignment:
Q  110 aagattgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||| |||||||||||| | |||||||| |||||| ||||||||||||||||||||||||||| || | |||| |||||||||||| ||||||||||    
T  10729 aagattattgacccagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaa 10827  T

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Target: scaffold0098 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 45253 - 45322
Alignment:
Q  110 aagattgttgacccagttcagc-caatatggcctaatctgggggagagagcagctctccaatccaatatg 178  Q
    |||||||||||| |||||| |  ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  45253 aagattgttgactcagttcggttcaatatgacctaatctgggggagagagcagctctccaatccactatg 45322  T

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Target: scaffold0267 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 329 - 269
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  329 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 269  T

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Target: scaffold0176 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 17266 - 17361
Alignment:
Q  113 attgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 205  Q
    |||||||||||||||| |  ||||||| |||||| ||||  |||||||| | |||||||||| |||| |||| |||||||||||| ||||||||||    
T  17266 attgttgacccagttcggttcaatatgacctaatatgggaaagagagcaaccctccaatccattatgatgaaagtgttacaaaagagttacaagaa 17361  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 173
Target Start/End: Original strand, 11500 - 11533
Alignment:
Q  140 cctaatctgggggagagagcagctctccaatcca 173  Q
    |||| |||||||||||||||||||||||||||||    
T  11500 cctagtctgggggagagagcagctctccaatcca 11533  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 69292 - 69352
Alignment:
Q  114 ttgttgacccagttcag-ccaatatggcctaatctgggggagagagcagctctccaatcca 173  Q
    ||||||||||||||| | ||||  || |||| ||||||||||||||||||||||| |||||    
T  69292 ttgttgacccagttcggtccaaattgacctagtctgggggagagagcagctctccgatcca 69352  T

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