View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0942_high_132 (Length: 228)
Name: NF0942_high_132
Description: NF0942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0942_high_132 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 14748391 - 14748618
Alignment:
| Q |
1 |
ttgtgtgtcaaccgctgtagaagattgtttgcaagaagacatatgttcttgctcattgatttcttcgaaatatttcttttagtaaaataataagacctta |
100 |
Q |
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| T |
14748391 |
ttgtgtgtcaaccggtgtagaagatggtttgcaagaagacatatgttcttgctcattgatttcttcgaaatatttcttttagtaaaataataagacctta |
14748490 |
T |
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| Q |
101 |
ttaatgtcgtgtaatagatatacccataaaatatttcaagggatctaaattcttcataccaaatttgtagtacaatttaggcatgatgggttggtggaga |
200 |
Q |
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| T |
14748491 |
ttaatgtcgtgtaatagatatacccataaaatatttcaagggatctaaattcttcataccaaatttggaatacaatttaggcatgatgggttggtggaga |
14748590 |
T |
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| Q |
201 |
gtatcagaagacaagacaagaataattt |
228 |
Q |
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| T |
14748591 |
gtatcagaagacaagacaagaataattt |
14748618 |
T |
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