View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0942_high_144 (Length: 209)

Name: NF0942_high_144
Description: NF0942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0942_high_144
NF0942_high_144
[»] chr2 (31 HSPs)
chr2 (15-191)||(2665790-2665966)
chr2 (34-84)||(21616762-21616812)
chr2 (37-83)||(36281688-36281734)
chr2 (33-116)||(44860319-44860404)
chr2 (35-84)||(30527604-30527653)
chr2 (48-84)||(20922937-20922973)
chr2 (48-84)||(34784991-34785027)
chr2 (34-84)||(23718026-23718076)
chr2 (34-84)||(24105698-24105748)
chr2 (34-84)||(31808077-31808127)
chr2 (34-84)||(37411253-37411303)
chr2 (35-116)||(2331795-2331876)
chr2 (35-88)||(28412351-28412404)
chr2 (34-83)||(28677909-28677958)
chr2 (35-80)||(31018591-31018636)
chr2 (35-84)||(35449514-35449563)
chr2 (35-84)||(39279676-39279725)
chr2 (48-84)||(20242736-20242772)
chr2 (55-116)||(28524447-28524510)
chr2 (34-85)||(19573978-19574029)
chr2 (35-116)||(22084805-22084890)
chr2 (37-80)||(23921256-23921299)
chr2 (42-84)||(5367200-5367242)
chr2 (34-84)||(16069263-16069313)
chr2 (34-84)||(18276521-18276571)
chr2 (39-81)||(35191591-35191633)
chr2 (34-88)||(36409632-36409686)
chr2 (33-117)||(4207856-4207941)
chr2 (42-79)||(21782832-21782869)
chr2 (34-78)||(30404865-30404909)
chr2 (41-81)||(40361766-40361806)
[»] scaffold0123 (1 HSPs)
scaffold0123 (33-116)||(44500-44585)
[»] chr3 (37 HSPs)
chr3 (34-84)||(32804549-32804599)
chr3 (37-84)||(49505163-49505210)
chr3 (42-84)||(11313809-11313851)
chr3 (34-84)||(16192759-16192809)
chr3 (34-116)||(55212963-55213046)
chr3 (35-81)||(4201397-4201443)
chr3 (34-84)||(7928450-7928500)
chr3 (34-116)||(25064909-25064991)
chr3 (42-116)||(4987266-4987342)
chr3 (35-80)||(14840304-14840349)
chr3 (42-79)||(27277852-27277889)
chr3 (34-78)||(10268501-10268545)
chr3 (43-115)||(15812799-15812871)
chr3 (41-84)||(2731819-2731862)
chr3 (34-81)||(7614427-7614474)
chr3 (34-81)||(8842330-8842376)
chr3 (34-81)||(10690274-10690321)
chr3 (42-122)||(11665952-11666034)
chr3 (45-84)||(15314885-15314924)
chr3 (33-80)||(34307793-34307840)
chr3 (37-84)||(38731221-38731268)
chr3 (35-106)||(8039820-8039893)
chr3 (34-80)||(8383257-8383303)
chr3 (42-88)||(11251986-11252032)
chr3 (34-84)||(25093502-25093552)
chr3 (39-77)||(28098143-28098181)
chr3 (42-84)||(48202278-48202320)
chr3 (33-78)||(1509538-1509583)
chr3 (33-82)||(9624640-9624689)
chr3 (39-84)||(11658820-11658865)
chr3 (42-83)||(12704015-12704056)
chr3 (42-116)||(14209121-14209197)
chr3 (34-116)||(15796269-15796353)
chr3 (44-84)||(8789559-8789599)
chr3 (42-82)||(11493372-11493412)
chr3 (48-84)||(35222952-35222988)
chr3 (42-78)||(55401083-55401119)
[»] chr6 (47 HSPs)
chr6 (15-78)||(25038086-25038148)
chr6 (34-84)||(5732519-5732569)
chr6 (42-84)||(7086803-7086845)
chr6 (34-84)||(19040352-19040402)
chr6 (35-84)||(7265602-7265651)
chr6 (35-88)||(31579230-31579283)
chr6 (33-81)||(5462685-5462733)
chr6 (34-81)||(9658879-9658926)
chr6 (33-80)||(32511679-32511726)
chr6 (42-88)||(8805577-8805623)
chr6 (42-84)||(9025503-9025545)
chr6 (42-84)||(9195763-9195805)
chr6 (34-84)||(10842532-10842582)
chr6 (34-84)||(10888983-10889033)
chr6 (42-84)||(17302355-17302397)
chr6 (34-80)||(17341677-17341723)
chr6 (34-112)||(5970087-5970167)
chr6 (42-116)||(16766705-16766781)
chr6 (35-84)||(30866153-30866202)
chr6 (35-84)||(32298616-32298665)
chr6 (37-84)||(9617437-9617484)
chr6 (48-116)||(16488565-16488635)
chr6 (35-85)||(1532241-1532291)
chr6 (42-84)||(7151420-7151462)
chr6 (34-84)||(7377979-7378029)
chr6 (34-84)||(9027178-9027228)
chr6 (34-84)||(9629383-9629433)
chr6 (46-84)||(11591879-11591917)
chr6 (45-83)||(13360382-13360420)
chr6 (34-84)||(13851736-13851786)
chr6 (42-84)||(24832596-24832638)
chr6 (42-84)||(26178690-26178732)
chr6 (46-84)||(26562701-26562739)
chr6 (39-81)||(32248937-32248979)
chr6 (33-83)||(32320679-32320729)
chr6 (35-77)||(34447374-34447416)
chr6 (42-116)||(7248366-7248442)
chr6 (42-83)||(24833243-24833284)
chr6 (34-82)||(677837-677885)
chr6 (42-82)||(7996389-7996429)
chr6 (42-82)||(8022372-8022412)
chr6 (32-84)||(14721239-14721291)
chr6 (52-84)||(17327664-17327696)
chr6 (42-78)||(17841604-17841640)
chr6 (32-84)||(21885790-21885842)
chr6 (42-78)||(25096431-25096467)
chr6 (42-82)||(34073358-34073398)
[»] chr8 (38 HSPs)
chr8 (33-104)||(11803258-11803331)
chr8 (34-84)||(39954288-39954338)
chr8 (34-84)||(4786347-4786397)
chr8 (42-84)||(14731720-14731762)
chr8 (34-84)||(34897085-34897135)
chr8 (34-112)||(4611534-4611614)
chr8 (40-84)||(33405393-33405437)
chr8 (34-84)||(11927095-11927145)
chr8 (42-84)||(13844605-13844647)
chr8 (34-84)||(24362211-24362261)
chr8 (37-82)||(13018284-13018329)
chr8 (35-84)||(20785474-20785523)
chr8 (32-84)||(12570517-12570569)
chr8 (40-80)||(31580140-31580180)
chr8 (42-81)||(14134707-14134746)
chr8 (42-80)||(3025559-3025597)
chr8 (22-84)||(7472524-7472586)
chr8 (34-84)||(11944665-11944715)
chr8 (42-80)||(15816142-15816180)
chr8 (39-81)||(24447034-24447076)
chr8 (42-84)||(27213555-27213597)
chr8 (42-84)||(31236586-31236628)
chr8 (42-84)||(34222955-34222997)
chr8 (42-116)||(2572031-2572107)
chr8 (32-81)||(12570746-12570795)
chr8 (33-78)||(24669432-24669477)
chr8 (44-81)||(26529751-26529788)
chr8 (51-84)||(26902184-26902217)
chr8 (42-111)||(29776044-29776113)
chr8 (35-84)||(33382028-33382077)
chr8 (34-78)||(4298901-4298945)
chr8 (42-78)||(8342980-8343016)
chr8 (42-78)||(8343324-8343360)
chr8 (33-73)||(18067954-18067994)
chr8 (48-84)||(18964191-18964227)
chr8 (16-80)||(20679408-20679471)
chr8 (42-78)||(20873077-20873113)
chr8 (36-88)||(37283815-37283867)
[»] chr4 (28 HSPs)
chr4 (34-84)||(22440609-22440659)
chr4 (36-83)||(903924-903971)
chr4 (34-84)||(5775367-5775417)
chr4 (44-84)||(13134460-13134500)
chr4 (34-81)||(21539879-21539926)
chr4 (34-80)||(8423731-8423777)
chr4 (34-84)||(11931280-11931330)
chr4 (42-84)||(36635332-36635374)
chr4 (34-84)||(40613450-40613500)
chr4 (34-84)||(40742591-40742641)
chr4 (42-82)||(7214533-7214573)
chr4 (52-84)||(10499279-10499311)
chr4 (45-84)||(17876166-17876205)
chr4 (42-84)||(999357-999399)
chr4 (39-81)||(3731208-3731250)
chr4 (42-76)||(17446079-17446113)
chr4 (42-84)||(33950144-33950186)
chr4 (32-82)||(40179647-40179697)
chr4 (34-84)||(48139264-48139314)
chr4 (41-78)||(6485626-6485663)
chr4 (35-84)||(16189710-16189759)
chr4 (47-84)||(17344513-17344550)
chr4 (41-78)||(27706192-27706229)
chr4 (39-84)||(44081586-44081631)
chr4 (15-79)||(2234232-2234295)
chr4 (43-83)||(9996849-9996889)
chr4 (44-84)||(18576046-18576086)
chr4 (48-84)||(46084000-46084036)
[»] chr1 (56 HSPs)
chr1 (34-84)||(39953155-39953205)
chr1 (42-116)||(12713302-12713378)
chr1 (42-116)||(12717393-12717469)
chr1 (34-81)||(34257922-34257969)
chr1 (34-84)||(1864889-1864939)
chr1 (42-83)||(14332652-14332693)
chr1 (31-80)||(25272479-25272528)
chr1 (41-84)||(39130776-39130819)
chr1 (44-112)||(44482240-44482310)
chr1 (34-84)||(2784556-2784606)
chr1 (42-84)||(7918220-7918262)
chr1 (34-84)||(13997883-13997933)
chr1 (34-84)||(25098564-25098614)
chr1 (34-116)||(26238091-26238171)
chr1 (42-84)||(34712392-34712434)
chr1 (34-80)||(36878461-36878507)
chr1 (35-84)||(6427351-6427400)
chr1 (42-116)||(12707848-12707924)
chr1 (42-83)||(40181879-40181920)
chr1 (34-111)||(17754311-17754390)
chr1 (44-84)||(19324572-19324612)
chr1 (44-84)||(25361896-25361936)
chr1 (48-84)||(30749854-30749890)
chr1 (48-84)||(30771305-30771341)
chr1 (34-78)||(41877485-41877529)
chr1 (18-81)||(48148049-48148112)
chr1 (33-84)||(34371713-34371763)
chr1 (37-84)||(52903252-52903299)
chr1 (34-80)||(398778-398824)
chr1 (42-84)||(10233261-10233303)
chr1 (42-84)||(12443469-12443511)
chr1 (42-84)||(13436466-13436508)
chr1 (42-84)||(16164324-16164366)
chr1 (34-84)||(17425102-17425152)
chr1 (34-84)||(17831540-17831590)
chr1 (34-84)||(20157359-20157409)
chr1 (34-80)||(21530689-21530735)
chr1 (35-81)||(28674801-28674847)
chr1 (34-84)||(32724107-32724157)
chr1 (42-80)||(34298444-34298482)
chr1 (42-84)||(35999331-35999373)
chr1 (34-84)||(38503320-38503370)
chr1 (35-84)||(9709821-9709870)
chr1 (40-77)||(15323169-15323206)
chr1 (44-81)||(20131987-20132024)
chr1 (42-116)||(32461439-32461514)
chr1 (35-84)||(36905998-36906047)
chr1 (48-81)||(45534202-45534235)
chr1 (34-74)||(2896140-2896180)
chr1 (34-82)||(5898277-5898325)
chr1 (42-78)||(22515902-22515938)
chr1 (42-78)||(22881631-22881667)
chr1 (33-84)||(29229460-29229512)
chr1 (42-78)||(31015051-31015087)
chr1 (42-78)||(37055871-37055907)
chr1 (42-107)||(42004937-42004998)
[»] chr7 (40 HSPs)
chr7 (34-82)||(27093424-27093472)
chr7 (34-82)||(27184829-27184877)
chr7 (34-106)||(29787356-29787428)
chr7 (33-84)||(8160415-8160466)
chr7 (37-84)||(17851434-17851481)
chr7 (34-84)||(1433454-1433504)
chr7 (34-84)||(2948683-2948733)
chr7 (42-112)||(15902830-15902902)
chr7 (34-112)||(32308120-32308200)
chr7 (40-84)||(5233635-5233679)
chr7 (48-84)||(18213042-18213078)
chr7 (32-84)||(27732248-27732300)
chr7 (33-108)||(11700802-11700877)
chr7 (42-84)||(3721101-3721143)
chr7 (42-84)||(7328700-7328742)
chr7 (42-84)||(16341504-16341546)
chr7 (34-84)||(20549791-20549841)
chr7 (34-84)||(22602719-22602769)
chr7 (34-84)||(33384591-33384641)
chr7 (36-84)||(2425742-2425790)
chr7 (32-84)||(42720899-42720951)
chr7 (34-81)||(5235986-5236033)
chr7 (41-84)||(38143230-38143273)
chr7 (34-84)||(5548676-5548726)
chr7 (42-84)||(12278843-12278885)
chr7 (34-84)||(19206050-19206100)
chr7 (34-84)||(22484025-22484075)
chr7 (42-84)||(22868050-22868092)
chr7 (42-84)||(24146824-24146866)
chr7 (34-84)||(26329391-26329441)
chr7 (34-118)||(49088810-49088892)
chr7 (42-79)||(2424622-2424659)
chr7 (41-78)||(9408349-9408386)
chr7 (34-83)||(23191896-23191945)
chr7 (44-81)||(35493423-35493460)
chr7 (48-81)||(39138458-39138491)
chr7 (42-115)||(6630888-6630963)
chr7 (44-84)||(9482944-9482984)
chr7 (34-82)||(10377507-10377555)
chr7 (54-82)||(41020516-41020544)
[»] chr5 (33 HSPs)
chr5 (34-84)||(27144463-27144513)
chr5 (34-116)||(3966503-3966587)
chr5 (34-116)||(18592073-18592157)
chr5 (35-84)||(36838544-36838593)
chr5 (33-85)||(24273038-24273090)
chr5 (33-85)||(24389124-24389176)
chr5 (42-82)||(35017045-35017085)
chr5 (33-84)||(6471898-6471949)
chr5 (34-84)||(7175028-7175078)
chr5 (34-84)||(11685939-11685989)
chr5 (42-84)||(16203804-16203846)
chr5 (34-80)||(28588687-28588733)
chr5 (34-83)||(2577190-2577239)
chr5 (35-84)||(30502397-30502446)
chr5 (35-84)||(30542740-30542789)
chr5 (44-84)||(14873527-14873567)
chr5 (48-84)||(39758286-39758322)
chr5 (42-81)||(12927662-12927701)
chr5 (48-116)||(21814275-21814345)
chr5 (33-80)||(23016002-23016049)
chr5 (37-80)||(30098329-30098372)
chr5 (42-84)||(23012417-23012459)
chr5 (34-84)||(23220983-23221033)
chr5 (39-81)||(28262408-28262450)
chr5 (42-84)||(41091266-41091308)
chr5 (32-81)||(17593734-17593783)
chr5 (42-116)||(21522758-21522834)
chr5 (42-116)||(21533324-21533400)
chr5 (42-78)||(14674277-14674313)
chr5 (44-84)||(18421850-18421890)
chr5 (40-84)||(19429438-19429482)
chr5 (42-78)||(19579709-19579745)
chr5 (42-78)||(33178033-33178069)
[»] scaffold0236 (1 HSPs)
scaffold0236 (32-80)||(25781-25829)
[»] scaffold0044 (1 HSPs)
scaffold0044 (43-116)||(53189-53264)
[»] scaffold0110 (1 HSPs)
scaffold0110 (34-84)||(28850-28900)
[»] scaffold0022 (2 HSPs)
scaffold0022 (34-84)||(99893-99943)
scaffold0022 (35-81)||(90844-90890)
[»] scaffold1528 (1 HSPs)
scaffold1528 (34-111)||(1035-1114)
[»] scaffold0024 (1 HSPs)
scaffold0024 (36-80)||(68255-68299)
[»] scaffold0697 (1 HSPs)
scaffold0697 (34-80)||(1644-1690)
[»] scaffold0036 (1 HSPs)
scaffold0036 (42-84)||(9756-9798)
[»] scaffold0020 (1 HSPs)
scaffold0020 (42-84)||(135321-135363)
[»] scaffold0136 (1 HSPs)
scaffold0136 (34-78)||(3864-3908)
[»] scaffold0027 (1 HSPs)
scaffold0027 (34-78)||(46682-46726)
[»] scaffold0018 (1 HSPs)
scaffold0018 (34-78)||(192264-192308)
[»] scaffold0011 (1 HSPs)
scaffold0011 (42-78)||(17764-17800)


Alignment Details
Target: chr2 (Bit Score: 137; Significance: 1e-71; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 2665966 - 2665790
Alignment:
Q  15 cacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgctgtgtcggtgttggacacaacacgt 114  Q
    |||||||| |||||||| | |||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  2665966 cacagatagtgacatgtctaacaccactaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttgaacacaacacgt 2665867  T
Q  115 gtttgataatgatgcacgtctaatccgaaaagtgccgtacttggtagttatcgacatacaatgattattataaaact 191  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||    
T  2665866 gtttgataatgatgcacgtctaatccgaaaagtgtcgtacttcgtagttatcgacgtacaatgattattataaaact 2665790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 21616762 - 21616812
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  21616762 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 21616812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 36281688 - 36281734
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  36281688 accgttaataatttgagaaaatcacataatttagtgtaatcatatgt 36281734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 44860319 - 44860404
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    |||||||| ||||||||| |||||||| ||||||| ||||||||||||||||  ||||  |||| |||||||||||| ||| ||||    
T  44860319 tgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgt 44860404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 30527653 - 30527604
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  30527653 acactgttaataatttgagaaaatcatataatttagtgtaattatatgtg 30527604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 20922973 - 20922937
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||||||||||||||||||||    
T  20922973 ttttagaaaatcacataatttagtgtaattatatgtg 20922937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 34785027 - 34784991
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||||||||||||||||||||    
T  34785027 ttttagaaaatcacataatttagtgtaattatatgtg 34784991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 23718026 - 23718076
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| ||||| |||||||||| ||||||||||||||||    
T  23718026 gacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 23718076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 24105698 - 24105748
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| ||||| |||||||||| ||||||||||||||||    
T  24105698 gacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 24105748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 31808077 - 31808127
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| | |||||||||||||| ||||||||||||||||    
T  31808077 gacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtg 31808127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 37411303 - 37411253
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||||||||| ||||| ||||||||||    
T  37411303 gacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtg 37411253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 2331795 - 2331876
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||| |||||||||| |||||||||||||||| |||||| |||| ||| ||||  ||||| |||| || |||| |||||||    
T  2331795 acaccattaataatttgagaaaatcacataattcagtgtatttatgtgtcggtgtcgtgtcagtgtcgggcacagcacgtgt 2331876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 28412351 - 28412404
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtg 88  Q
    |||||||||||||||| | |||||||||||||| ||||||||||| ||| ||||    
T  28412351 acaccgttaataatttgataaaatcacataattcagtgtaattatgtgtcggtg 28412404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 28677909 - 28677958
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    ||||||| ||||||||| | |||||||||||||| |||||||||||||||    
T  28677909 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 31018591 - 31018636
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    |||||| ||||||||| |||||||||||| ||||||||||||||||    
T  31018591 acaccgctaataatttcagaaaatcacatgatttagtgtaattata 31018636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 35449514 - 35449563
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| ||||||||||| ||||||||||| |||| ||||||||||||||||    
T  35449514 acactgttaataatttgagaaaatcacagaattcagtgtaattatatgtg 35449563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 39279676 - 39279725
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||| | ||||||||| |||||| ||||||||||||||||    
T  39279676 acaccgttaataatatgagaaaatcaaataattcagtgtaattatatgtg 39279725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 20242772 - 20242736
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||| ||||||||||||||||    
T  20242772 ttttagaaaatcacataattcagtgtaattatatgtg 20242736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 28524447 - 28524510
Alignment:
Q  55 aaatcacataatttagtgtaattatatgtg--ggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||||| ||||||||||||||||  | || ||||| ||||| |||||||||||||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacacaacacgtgt 28524510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 19573978 - 19574029
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 85  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||||||| ||||    
T  19573978 gacaccgataataatttaagaaaataacataattcagtgtaattataggtgg 19574029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 22084890 - 22084805
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaatt--atatgtg--ggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    |||||||||||||||| ||||||||| |||||| |||||||||  |||||||  |||   ||||| |||| |||||||||||||||    
T  22084890 acaccgttaataatttgagaaaatcatataattcagtgtaattttatatgtgccggtatcgtgtcagtgtcggacacaacacgtgt 22084805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 23921256 - 23921299
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    |||||||||||||| ||||||| |||||||| ||||||||||||    
T  23921256 accgttaataatttgagaaaattacataattcagtgtaattata 23921299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 5367200 - 5367242
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtg 5367242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 16069313 - 16069263
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||||| | ||||||| |||||| ||||||||||| ||||    
T  16069313 gacaccgttaataatttaaaaaaatcatataattcagtgtaattatttgtg 16069263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 18276521 - 18276571
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||| ||||| ||||||||||| ||||    
T  18276521 gacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtg 18276571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 35191633 - 35191591
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  35191633 cgttgataatttgagaaaatcacataatttagggtaattatat 35191591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 36409686 - 36409632
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtg 88  Q
    ||||||| | ||||||| | |||||||||||||||||||||||||| ||| ||||    
T  36409686 gacaccgctgataatttgaaaaaatcacataatttagtgtaattatgtgtcggtg 36409632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 4207856 - 4207941
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattata-tgtgggtgctgtgtcggtgttggacacaacacgtgtt 117  Q
    |||||||  ||||||||| | |||| | |||||||||||||||||||| ||| |||   |||||||||| |||||| |||||||||    
T  4207856 tgacaccactaataatttgaaaaaagcgcataatttagtgtaattatattgtcggtatcgtgtcggtgtcggacacgacacgtgtt 4207941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 21782869 - 21782832
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattat 79  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  21782869 taataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 30404909 - 30404865
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  30404909 gacacggttaataatttgaaaaaatcacataattcagtgtaatta 30404865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 40361806 - 40361766
Alignment:
Q  41 ttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||||||||| | ||||| ||||||||||||||||||||||    
T  40361806 ttaataatttgaaaaaattacataatttagtgtaattatat 40361766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 44585 - 44500
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||||||||  |||   ||||||||||||||||||||||||||    
T  44585 tgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgt 44500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 5e-18; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 32804599 - 32804549
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32804599 gacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtg 32804549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 49505210 - 49505163
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  49505210 accgctaataatttgagaaaatcacataatttagtgtaattatatgtg 49505163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 11313851 - 11313809
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  11313851 taataatttgagaaaatcacataatttagtgtaattatatgtg 11313809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 16192809 - 16192759
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||||||||||    
T  16192809 gacaccgttaataatttgagaaaataacataattcagtgtaattatatgtg 16192759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 55212963 - 55213046
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||| |  ||| |||| ||||||||||| || ||||||||||||    
T  55212963 gacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcggtg-tgtgtcggtgtcgggcacaacacgtgt 55213046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 4201397 - 4201443
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||    
T  4201397 acaccgttaataatttgaaaaaatcacataattaagtgtaattatat 4201443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 7928450 - 7928500
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| | |||||||||||||| ||||||||||||||||    
T  7928450 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtg 7928500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 25064909 - 25064991
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||| |||| |||| | |||||||||||||||||||||||||| ||| |||   |||| ||||| |||||| ||||||||    
T  25064909 gacaccgctaatgatttgaaaaaatcacataatttagtgtaattatgtgttggtatcgtgttggtgtcggacacgacacgtgt 25064991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 4987342 - 4987266
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| ||||  ||||||||||||||||| ||||||||    
T  4987342 taataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgt 4987266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 14840349 - 14840304
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||||    
T  14840349 acaccattaataatttcagaaaatcacataattcagtgtaattata 14840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 27277889 - 27277852
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattat 79  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  27277889 taataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 10268545 - 10268501
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||| ||||||||||| | |||||||||||||||||||||||||    
T  10268545 gacacagttaataatttgaaaaaatcacataatttagtgtaatta 10268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 15812871 - 15812799
Alignment:
Q  43 aataattttagaaaatcacataatttagtgtaattatatgtgggtgctgtgtcggtgttggacacaacacgtg 115  Q
    |||||||| |||||||||||||| | ||||||||||||||  ||||  |||| ||||| |||||| |||||||    
T  15812871 aataatttgagaaaatcacataactcagtgtaattatatgccggtgtcgtgttggtgtcggacacgacacgtg 15812799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 2731819 - 2731862
Alignment:
Q  41 ttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||    
T  2731819 ttaatactttaagaaaatcacataattaagtgtaattatatgtg 2731862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 7614474 - 7614427
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||| ||||||||||| |||||||||||||||| ||| |||||||||    
T  7614474 gacacagttaataatttaagaaaatcacataattcagtataattatat 7614427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 8842330 - 8842376
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  8842330 gacaccgctaataatttt-gaaaatcacataatttggtgtaattatat 8842376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 10690321 - 10690274
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||| ||||||| | |||||||||||||||| |||||||||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaattatat 10690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 11665952 - 11666034
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgctgtgtcggtgttggacacaacacgtgtttgata 122  Q
    ||||||||| | ||||||||| |||||||||||||||||||||  ||||  |||| | |||| ||||| |||||||| |||||    
T  11665952 taataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctgata 11666034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 15314924 - 15314885
Alignment:
Q  45 taattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  15314924 taatttgaaaaaatcacataatttagtgtaattatatgtg 15314885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 34307840 - 34307793
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    |||||||| ||||||||| ||||||||||||| || ||||||||||||    
T  34307840 tgacaccgctaataatttgagaaaatcacatatttcagtgtaattata 34307793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 38731221 - 38731268
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| ||||||||||| |||||||||||||| |||||| |||||||||    
T  38731221 accgctaataattttaaaaaatcacataattcagtgtagttatatgtg 38731268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 8039893 - 8039820
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgctgtgtcggtgttggaca 106  Q
    |||||| ||||||||| ||||||| | |||||| ||||||||||||||||  ||||  |||||||||| |||||    
T  8039893 acaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 8039820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 8383257 - 8383303
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  8383257 gacaccgctaataatttgagaaaatcatataattcagtgtaattata 8383303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 11251986 - 11252032
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtg 88  Q
    ||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  11251986 taataatttgagaaaatcacataattcagtgtaattatgtgtcggtg 11252032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 25093502 - 25093552
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||| |||||| |||| ||||||||||| |||| ||||||||||||||||    
T  25093502 gacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtg 25093552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 28098143 - 28098181
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaatt 77  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  28098143 cgttgataattttagaaaatcacataatttagggtaatt 28098181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 48202320 - 48202278
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||    
T  48202320 taatagtttgagaaaatcacataatttaatgtaattatatgtg 48202278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 1509538 - 1509583
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    |||||| | ||||||||| | |||||||||||||||||||||||||    
T  1509538 tgacacagctaataatttgaaaaaatcacataatttagtgtaatta 1509583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 9624640 - 9624689
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    |||||| | ||||||||| |||||||||||||||| | ||||||||||||    
T  9624640 tgacactgctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 11658820 - 11658865
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||| |||||||| ||||||| ||||| ||||||||||    
T  11658820 cgttaataatttgagaaaatcgcataattcagtgtgattatatgtg 11658865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 12704015 - 12704056
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    ||||||||| |||||| ||||||||| |||||||||||||||    
T  12704015 taataatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 14209121 - 14209197
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||| |||||||||||||| |||||||||| |  |||  |||  |||||||||| |||||| ||||||||    
T  14209121 taataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgt 14209197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 15796353 - 15796269
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||| ||||||||||| | ||||||| |||||| |||||||||| |  ||| ||||  |||| ||||| |||||||||||||||    
T  15796353 gacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgt 15796269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 8789599 - 8789559
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||||||||||  |||||||||||||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtg 8789559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 11493412 - 11493372
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||| | |||||||||||||||| ||||||||||||||    
T  11493412 taataatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 35222952 - 35222988
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||| | ||||||||||||||    
T  35222952 ttttagaaaatcacataattcaatgtaattatatgtg 35222988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 55401083 - 55401119
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  55401083 taataatttgaaaaaatcacataatttagtgtaatta 55401119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 3e-16; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 25038148 - 25038086
Alignment:
Q  15 cacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||||||    
T  25038148 cacagatactgacacgtt-gacaccgttaataatttgagaaaattacataatttagtgtaatta 25038086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 5732569 - 5732519
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  5732569 gacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtg 5732519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 7086803 - 7086845
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  7086803 taataatttgagaaaatcacataatttagtgtaattatatgtg 7086845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 19040352 - 19040402
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  19040352 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 19040402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 7265651 - 7265602
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  7265651 acaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 7265602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 31579283 - 31579230
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtg 88  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  31579283 acaccgttaataatttgagaaaatcacataattcagtgtaattatgtgtcggtg 31579230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 5462685 - 5462733
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||    
T  5462685 tgacaccgttaataatttgagaaaatcacataattcattgtaattatat 5462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 9658879 - 9658926
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||    
T  9658879 gacaccgctaataatttaagaaaatcacataattcagtgtaattatat 9658926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 32511726 - 32511679
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  32511726 tgacaccgctaataatttaagaaaatcacataattcagtgtaattata 32511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 8805623 - 8805577
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtg 88  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  8805623 taataatttgagaaaatcacataatttagtgtaattatgtgtcggtg 8805577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 9025545 - 9025503
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtg 9025503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 9195805 - 9195763
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  9195805 taataatttgagaaaatgacataatttagtgtaattatatgtg 9195763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 10842532 - 10842582
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| | ||||||||||||||||||||||| |||||||    
T  10842532 gacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtg 10842582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 10889033 - 10888983
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| | |||||||||||||||||||| ||||||||||    
T  10889033 gacaccgctaataatttgataaaatcacataatttagtgtgattatatgtg 10888983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 17302355 - 17302397
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||||||||||||| |||||||||||||||    
T  17302355 taataatttaagaaaatcacataattttgtgtaattatatgtg 17302397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 17341723 - 17341677
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||    
T  17341723 gacaccgttaataatttgataaaatcacataattcagtgtaattata 17341677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 5970167 - 5970087
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaatt--atatgtgggtgctgtgtcggtgttggacacaacac 112  Q
    ||||| ||||||||||| | |||||||||||||| |||||||||  | |||||||||  |||||||||| |||||| ||||    
T  5970167 gacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacac 5970087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 16766705 - 16766781
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| ||||  |||||||||| |||||||||||||||    
T  16766705 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgt 16766781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 30866202 - 30866153
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtg 30866153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 32298665 - 32298616
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| |||  ||||||||||||||||||||||||||||    
T  32298665 acaccgctaataatttaagatcatcacataatttagtgtaattatatgtg 32298616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 9617437 - 9617484
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  9617437 accggtaataatttgagaaaatcacataattcaatgtaattatatgtg 9617484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 16488635 - 16488565
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||||||| |||  ||||||||||||||||  ||||  |||||||||| |||||| ||||||||    
T  16488635 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 16488565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 1532241 - 1532291
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 85  Q
    |||||| ||||||||| | ||||| |||||||| |||||||||||||||||    
T  1532241 acaccgctaataatttgataaaattacataattcagtgtaattatatgtgg 1532291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 7151420 - 7151462
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| | |||||||||||||| ||||||||||||||||    
T  7151420 taataatttgaaaaaatcacataattaagtgtaattatatgtg 7151462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 7377979 - 7378029
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||| ||||| |||||||||||||||| | ||||||||||||||    
T  7377979 gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtg 7378029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 9027178 - 9027228
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| ||| ||||||||||||  |||||||||||||||    
T  9027178 gacaccgctaataatttgagataatcacataattccgtgtaattatatgtg 9027228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 9629383 - 9629433
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||  |||||||| |||||||||||||||| | ||||||||||||||    
T  9629383 gacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtg 9629433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 11591917 - 11591879
Alignment:
Q  46 aattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtg 11591879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 13360420 - 13360382
Alignment:
Q  45 taattttagaaaatcacataatttagtgtaattatatgt 83  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattatatgt 13360382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 13851736 - 13851786
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| ||||||| || ||||| ||||||||||||||||    
T  13851736 gacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtg 13851786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 24832596 - 24832638
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||||  |||||||||||||||||||||||    
T  24832596 taataatttgagaaaatcttataatttagtgtaattatatgtg 24832638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 26178732 - 26178690
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| | ||||||||||||||||||||||| |||||||    
T  26178732 taataatttgataaaatcacataatttagtgtaatcatatgtg 26178690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 26562701 - 26562739
Alignment:
Q  46 aattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtg 26562739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 32248979 - 32248937
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||    
T  32248979 cgttgataattttaaaaaatcacataatttagggtaattatat 32248937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 32320729 - 32320679
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    |||||||||||||||||| | |||||||||||||| | ||| |||||||||    
T  32320729 tgacaccgttaataatttgataaaatcacataattcaatgtcattatatgt 32320679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 34447416 - 34447374
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaatt 77  Q
    |||||||||||||||| | ||||||| ||||||||||||||||    
T  34447416 acaccgttaataatttgataaaatcatataatttagtgtaatt 34447374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 7248366 - 7248442
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||| | || ||||||||||||| || |||||||||||||  || |  ||||||||||||||||||||| ||||    
T  7248366 taataatctgaggaaatcacataattcagggtaattatatgtgttggagtcgtgtcggtgttggacacaacatgtgt 7248442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 24833284 - 24833243
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    |||||| || |||||||| |||||||||||||||||||||||    
T  24833284 taataagttaagaaaatcgcataatttagtgtaattatatgt 24833243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 677837 - 677885
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||| ||||||||||| ||||||||| ||||| ||||||| |||||||    
T  677837 gacactgttaataatttgagaaaatcatataatatagtgtatttatatg 677885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 7996429 - 7996389
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||||| ||||||||| |||||| ||||||||||||||    
T  7996429 taataatttgagaaaatcatataattcagtgtaattatatg 7996389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 8022372 - 8022412
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||||| ||||||||| |||||| ||||||||||||||    
T  8022372 taataatttgagaaaatcatataattcagtgtaattatatg 8022412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 14721239 - 14721291
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||| |||||||||| ||||||| |||||||| | | ||||||||||||    
T  14721239 ttgacaccattaataatttaagaaaattacataattcactataattatatgtg 14721291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 17327696 - 17327664
Alignment:
Q  52 agaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||||||| ||||||||    
T  17327696 agaaaatcacataatttagtgtaactatatgtg 17327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 17841640 - 17841604
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  17841640 taataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 21885790 - 21885842
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||||| | ||||| |||||||||| | ||||||||||||    
T  21885790 ttgacaccgataataatttaaaaaaataacataatttaatctaattatatgtg 21885842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 25096431 - 25096467
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  25096431 taataatttgagaaaatcacataatctagtgtaatta 25096467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 34073398 - 34073358
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||||| |||||||| ||||||| ||||||||||||||    
T  34073398 taataatttgagaaaatctcataattcagtgtaattatatg 34073358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 11803258 - 11803331
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgctgtgtcggtgttgga 104  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||||||||||  |||| ||||| |||||||||    
T  11803258 tgacactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgttgga 11803331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 39954338 - 39954288
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  39954338 gacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 4786397 - 4786347
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  4786397 gacaccattaataatttaagaaaatcacataattcagtgtaattatatgtg 4786347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 14731720 - 14731762
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  14731720 taataatttgagaaaatcacataatttagtgtaattatatgtg 14731762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 34897085 - 34897135
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  34897085 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 34897135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 4611534 - 4611614
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg--tgggtgctgtgtcggtgttggacacaacac 112  Q
    ||||||| ||||||||| ||||||| |||||||| ||||||||||||||  | |||||||||||||| | |||||| ||||    
T  4611534 gacaccgctaataatttgagaaaataacataattcagtgtaattatatgtctcggtgctgtgtcggtatcggacacgacac 4611614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 33405437 - 33405393
Alignment:
Q  40 gttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||    
T  33405437 gttaataatttgagaaaaacacataatttagtgtaattatatgtg 33405393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 11927145 - 11927095
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||||||||    
T  11927145 gacactgttaataatttgataaaatcacataattcagtgtaattatatgtg 11927095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 13844647 - 13844605
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  13844647 taataatttgagaaaatcacataattgagtgtaattatatgtg 13844605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 24362261 - 24362211
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| ||| |||||||||||| ||||||||||||||||    
T  24362261 gacaccgctaataatttgagagaatcacataattcagtgtaattatatgtg 24362211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 13018284 - 13018329
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    |||||||||||||| | ||||||||||||||||||||||| |||||    
T  13018284 accgttaataatttgacaaaatcacataatttagtgtaatgatatg 13018329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 20785523 - 20785474
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| || ||||||||||||||| ||||||||||||||    
T  20785523 acaccgctaataatttgaggaaatcacataatttaatgtaattatatgtg 20785474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 12570569 - 12570517
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| | ||||||||| |||||| ||||||||| ||||||||||||||||    
T  12570569 ttgacactgctaataatttaagaaaaacacataattaagtgtaattatatgtg 12570517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 31580180 - 31580140
Alignment:
Q  40 gttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  31580180 gttaataatttaagaaaatcacataattgagtgtaattata 31580140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 14134707 - 14134746
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaattatat 14134746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 3025559 - 3025597
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattata 3025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 7472586 - 7472524
Alignment:
Q  22 actgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||| || ||||||  ||||||||| |  ||||||||||| ||||||||||||||||||    
T  7472586 actgacatattcgacaccactaataatttaaagaaatcacataaattagtgtaattatatgtg 7472524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 11944665 - 11944715
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||| ||||||||||| | |||||||||||| | ||||||||||||||||    
T  11944665 gacactgttaataatttgataaaatcacataactcagtgtaattatatgtg 11944715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 15816180 - 15816142
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  15816180 taataatttgaaaaaatcacataatttagtgtaattata 15816142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 24447034 - 24447076
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  24447034 cgttgataatttgagaaaatcacataatttagggtaattatat 24447076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 27213555 - 27213597
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||| | ||||||||||||||    
T  27213555 taataatttcagaaaatcacataattcactgtaattatatgtg 27213597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 31236628 - 31236586
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||| | ||||||||||||||    
T  31236628 taataatttgagaaaatcacataattcaatgtaattatatgtg 31236586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 34222955 - 34222997
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| | |||||||||||||| ||||||||||||||||    
T  34222955 taataatttaataaaatcacataattaagtgtaattatatgtg 34222997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 2572107 - 2572031
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| | ||||||||||||||||||||||||| |  ||| ||||  ||||| |||| |||||| ||||||||    
T  2572107 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgtgt 2572031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 12570795 - 12570746
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||||| ||||||||| |||||| | ||||||| |||||||||||||    
T  12570795 ttgacaccgctaataatttaagaaaaacgcataattaagtgtaattatat 12570746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 24669432 - 24669477
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    |||||||||||||||||| || |||| |||||||| ||||||||||    
T  24669432 tgacaccgttaataatttgaggaaattacataattcagtgtaatta 24669477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 26529751 - 26529788
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  26529751 ataatttgagaaaatcacataatttagggtaattatat 26529788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 26902217 - 26902184
Alignment:
Q  51 tagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||||| ||||||||||||||||    
T  26902217 tagaaaatcacataattcagtgtaattatatgtg 26902184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 29776044 - 29776113
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgctgtgtcggtgttggacacaaca 111  Q
    ||||||||| |||||||||| ||||| ||| ||||||||||| |||| |  ||| |||| ||||||||||    
T  29776044 taataatttgagaaaatcacgtaattcagtataattatatgtcggtgttaagtcagtgtcggacacaaca 29776113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 33382077 - 33382028
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| ||||||| |||||||| || |||||||||||||    
T  33382077 acaccgataataatttaagaaaatgacataattcagagtaattatatgtg 33382028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 4298945 - 4298901
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||| ||||||||||| | |||||||||||||||| ||||||||    
T  4298945 gacacagttaataatttgaaaaaatcacataatttaatgtaatta 4298901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 8342980 - 8343016
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  8342980 taataatttgaaaaaatcacataatttagtgtaatta 8343016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 8343324 - 8343360
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  8343324 taataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 18067994 - 18067954
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgt 73  Q
    |||||||| ||||||||| |||||||||||||||| |||||    
T  18067994 tgacaccgctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 18964191 - 18964227
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||| | ||||||||||||||    
T  18964191 ttttagaaaatcacataattcaatgtaattatatgtg 18964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 20679471 - 20679408
Alignment:
Q  16 acagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||| ||||||||||  ||||||  ||||||||| ||||||||||||| || ||||||||||||    
T  20679471 acagacactgacatgtc-gacacccctaataatttgagaaaatcacatagttcagtgtaattata 20679408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 20873077 - 20873113
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaatta 20873113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 37283867 - 37283815
Alignment:
Q  36 caccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtg 88  Q
    ||||| ||||||| | |||||||||||||||| ||||||||||| ||| ||||    
T  37283867 caccgctaataatctgagaaaatcacataattcagtgtaattatgtgtcggtg 37283815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 22440659 - 22440609
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  22440659 gacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 903924 - 903971
Alignment:
Q  36 caccgttaataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  903924 caccgttaataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 5775417 - 5775367
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  5775417 gacaccattaataatttgagaaaatcacataattaagtgtaattatatgtg 5775367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 13134460 - 13134500
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  13134460 ataatttaagaaaatcacataatttagtgtaattatatgtg 13134500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 21539926 - 21539879
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  21539926 gacaccattaataatttaagaaaatcatataatttagtgtaattatat 21539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 8423777 - 8423731
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  8423777 gacaccgctaataatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 11931280 - 11931330
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||| | | |||||||||||||||||||||| ||||||||    
T  11931280 gacaccgttaataatatgaaaaaatcacataatttagtgtaaatatatgtg 11931330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 36635332 - 36635374
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  36635332 taataatttgagaaaatcacataattcagtgtaattatatgtg 36635374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 40613450 - 40613500
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||| ||| |||||||||||||||| ||||||||||||||||    
T  40613450 gacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtg 40613500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 40742591 - 40742641
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| |||||||||| ||||||||| ||||| |||||||||||||||||    
T  40742591 gacaccattaataatttgagaaaatcatataatctagtgtaattatatgtg 40742641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 7214573 - 7214533
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  7214573 taataatttgagaaaatcacataatttaatgtaattatatg 7214533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 10499311 - 10499279
Alignment:
Q  52 agaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||||||||||||||||    
T  10499311 agaaaatcacataatttagtgtaattatatgtg 10499279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 17876166 - 17876205
Alignment:
Q  45 taattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  17876166 taattttagaaaatgacataatttagtgtaatcatatgtg 17876205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 999399 - 999357
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| || |||||| |||||||||||||||||||||||    
T  999399 taataatttgagtaaatcatataatttagtgtaattatatgtg 999357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 3731208 - 3731250
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  3731208 cgttgataatttgagaaaatcacataatttagggtaattatat 3731250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 76
Target Start/End: Original strand, 17446079 - 17446113
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaat 76  Q
    ||||||||| |||||||||||||||||||||||||    
T  17446079 taataatttaagaaaatcacataatttagtgtaat 17446113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 33950144 - 33950186
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||||| |||||| |||||||    
T  33950144 taataatttgagaaaatcacataatttaatgtaatcatatgtg 33950186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 40179697 - 40179647
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    |||||||| |||||| ||| | |||||||||||||| ||||||||||||||    
T  40179697 ttgacaccattaatagtttgaaaaaatcacataattcagtgtaattatatg 40179647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 48139264 - 48139314
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  48139264 gacactgttaataatttgagataatctcataatttaatgtaattatatgtg 48139314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 6485663 - 6485626
Alignment:
Q  41 ttaataattttagaaaatcacataatttagtgtaatta 78  Q
    |||||||||| | |||||||||||||||||||||||||    
T  6485663 ttaataatttgaaaaaatcacataatttagtgtaatta 6485626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 16189710 - 16189759
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||| ||||| |||||||||||||||| ||||||||||| ||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtg 16189759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 17344513 - 17344550
Alignment:
Q  47 attttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  17344513 atttaagaaaatcacataatttaatgtaattatatgtg 17344550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 27706229 - 27706192
Alignment:
Q  41 ttaataattttagaaaatcacataatttagtgtaatta 78  Q
    |||||||||| | |||||||||||||||||||||||||    
T  27706229 ttaataatttaaaaaaatcacataatttagtgtaatta 27706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 44081631 - 44081586
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||| | ||||||| |||||||| ||||||||||||||    
T  44081631 cgttaataatttgaaaaaatcatataatttaatgtaattatatgtg 44081586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 2234232 - 2234295
Alignment:
Q  15 cacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattat 79  Q
    |||||||||||||| | | | ||||||| ||||||| |||||||||||||||| | |||||||||    
T  2234232 cacagatactgacacgct-gtcaccgttgataatttgagaaaatcacataattcaatgtaattat 2234295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 9996849 - 9996889
Alignment:
Q  43 aataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    |||||||| |||||||||||||||| ||| |||||||||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgt 9996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 18576086 - 18576046
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||||||||||  |||||||||||||||    
T  18576086 ataatttgagaaaatcacataattcggtgtaattatatgtg 18576046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 46084036 - 46084000
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| |||||||||||| |||||||||||||||||    
T  46084036 ttttagtaaatcacataatctagtgtaattatatgtg 46084000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 39953205 - 39953155
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  39953205 gacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtg 39953155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 12713378 - 12713302
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg--tgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| |||||||||||||||||||||||||||||||  | |||| | ||||||||| | |||||||||||||    
T  12713378 taataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12713302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 12717469 - 12717393
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg--tgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| |||||||||||||||||||||||||||||||  | |||| | ||||||||| | |||||||||||||    
T  12717469 taataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12717393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 34257969 - 34257922
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  34257969 gacaccgttaataatttaataaaatcacataatttagtgtaattatat 34257922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 1864939 - 1864889
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  1864939 gacacagttaataatttgagaaaatcacataattcagtgtaattatatgtg 1864889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 14332693 - 14332652
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  14332693 taataatttgagaaaatcacataatttagtgtaattatatgt 14332652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 25272479 - 25272528
Alignment:
Q  31 tttgacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  25272479 tttgacacagttaacaatttgagaaaatcacataatttagtgtaattata 25272528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 39130819 - 39130776
Alignment:
Q  41 ttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  39130819 ttaataattttagaaaattatataatttagtgtaattatatgtg 39130776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 44482240 - 44482310
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg--ggtgctgtgtcggtgttggacacaacac 112  Q
    ||||||| |||||||||||||||| ||||||||||||||||  ||||  |||||||||| |||||| ||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacac 44482310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 2784556 - 2784606
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||| ||||| |||||||||||||||| ||| ||||||||||||    
T  2784556 gacaccgttaaaaatttaagaaaatcacataattgagtataattatatgtg 2784606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 7918262 - 7918220
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattatatgtg 7918220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 13997883 - 13997933
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||| |||| | |||||||||||||| ||||||||||||||||    
T  13997883 gacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtg 13997933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 25098614 - 25098564
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| | ||||||| |||||||||||||||| ||||||||||||||||    
T  25098614 gacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtg 25098564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 26238171 - 26238091
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||| |||||||   | ||||||||||| |||||||||||||||    
T  26238171 gacaccgctaataatttgagaaaataacataattcagtgtaat-atatgtgtcag-tgtgtcggtgtcggacacaacacgtgt 26238091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 34712434 - 34712392
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  34712434 taataatttgagaaaataacataatttagtgtaattatatgtg 34712392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 36878461 - 36878507
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  36878461 gacaccgctaataatttgagaaaatcacataattcagtgtaattata 36878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 6427351 - 6427400
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  6427351 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtg 6427400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 12707924 - 12707848
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg--tgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| ||||||||| ||||||||||| |||||||||  | |||| | ||||||||| | |||||||||||||    
T  12707924 taataatttaagaaaatcatataatttagtgcaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12707848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 40181879 - 40181920
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattatatgt 40181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 17754311 - 17754390
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg--gtgctgtgtcggtgttggacacaaca 111  Q
    ||||||| ||||||||| | ||||| |||||||| ||||||| ||||||||   |||  |||||||||||||||||||||    
T  17754311 gacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaaca 17754390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 19324572 - 19324612
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 25361896 - 25361936
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtg 25361936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 30749854 - 30749890
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30749854 ttttagaaaatcacataattcagtgtaattatatgtg 30749890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 30771305 - 30771341
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30771305 ttttagaaaatcacataattcagtgtaattatatgtg 30771341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 41877529 - 41877485
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||    
T  41877529 gacaccgctaataatttgagaaaattacataatttagtgtaatta 41877485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 48148112 - 48148049
Alignment:
Q  18 agatactgacatgtttgacaccgttaataattttagaaaa-tcacataatttagtgtaattatat 81  Q
    ||||||||||||||| ||||||| ||||||||||| |||| ||| |||||| |||||||||||||    
T  48148112 agatactgacatgtt-gacaccgctaataattttaaaaaaatcatataattcagtgtaattatat 48148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 34371713 - 34371763
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||| ||||||||  |||||||||||||||| ||||||||||||||||    
T  34371713 tgacaccgctaataattg-agaaaatcacataattcagtgtaattatatgtg 34371763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 52903252 - 52903299
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||| | ||||||| |||||| ||||||||||||||||    
T  52903252 accgttaataatttaataaaatcatataattcagtgtaattatatgtg 52903299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 398824 - 398778
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||| ||||||||| | |||||||||||||| ||||||||||||    
T  398824 gacaccgctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 10233261 - 10233303
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| || |||||||||||||||| ||||||||||||||||    
T  10233261 taataaattgagaaaatcacataattcagtgtaattatatgtg 10233303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 12443511 - 12443469
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||    
T  12443511 taataatttgagaaaatcacataattcagtgtaattgtatgtg 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 13436466 - 13436508
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  13436466 taataatttaaggaaatcacataattcagtgtaattatatgtg 13436508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 16164366 - 16164324
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| | |||||||||||||||| ||||||||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtg 16164324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 17425152 - 17425102
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| | |||||||||||||| | ||||||||||||||    
T  17425152 gacaccgataataatttgataaaatcacataattcaatgtaattatatgtg 17425102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 17831590 - 17831540
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||||| ||| |||||||| |||||||    
T  17831590 gacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtg 17831540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 20157409 - 20157359
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||| | |||||||||||||||| |||||||| |||||||    
T  20157409 gacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtg 20157359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 21530689 - 21530735
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||||||||||||| ||||||||| ||||||| || ||||||||    
T  21530689 gacaccgttaataatttgagaaaatcatataatttggtataattata 21530735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 28674801 - 28674847
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||||||||||||||| ||||||| |||||||| ||| |||||||||    
T  28674801 acaccgttaataatttgagaaaattacataattcagtataattatat 28674847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 32724157 - 32724107
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| |||||||||||| ||||| | |||||||||| ||||||||||||||    
T  32724157 gacatcgttaataatttgagaaatttacataatttaatgtaattatatgtg 32724107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 34298444 - 34298482
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  34298444 taataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 35999373 - 35999331
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||    
T  35999373 taataatttaagaaaatcatataatttagtataattatatgtg 35999331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 38503320 - 38503370
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| ||||||||| ||| || ||||||||||||||||    
T  38503320 gacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtg 38503370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 9709821 - 9709870
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| ||||||||||||||||   ||||||||||||||    
T  9709821 acaccgctaataatttgagaaaatcacataattcgttgtaattatatgtg 9709870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 15323169 - 15323206
Alignment:
Q  40 gttaataattttagaaaatcacataatttagtgtaatt 77  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  15323169 gttaataatttgaaaaaatcacataatttagtgtaatt 15323206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 20132024 - 20131987
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  20132024 ataatttgagaaaatcacataatttagggtaattatat 20131987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 32461514 - 32461439
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| | |||||||||||||||| |||||||| |  ||| |||| ||||||||||| |||||| ||||||||    
T  32461514 taataatttgaaaaaatcacataatttaatgtaattacaagtgttggtg-tgtgtcggtgtcggacacgacacgtgt 32461439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 36905998 - 36906047
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||| | |||||||||||||||| || |||||||||||||    
T  36905998 acaccgctaataatctgagaaaatcacataattcagagtaattatatgtg 36906047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 45534235 - 45534202
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatat 81  Q
    |||||||||||||||||||||||||||| |||||    
T  45534235 ttttagaaaatcacataatttagtgtaagtatat 45534202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 2896180 - 2896140
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgta 74  Q
    ||||||| ||||||||| |||||||||||||||| ||||||    
T  2896180 gacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 5898325 - 5898277
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||| ||||||| | | |||||||||||||| ||||||||||||||    
T  5898325 gacaccgctaataatctgaaaaaatcacataattcagtgtaattatatg 5898277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 22515938 - 22515902
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  22515938 taataatttgaaaaaatcacataatttagtgtaatta 22515902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 22881667 - 22881631
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  22881667 taataatttgaaaaaatcacataatttagtgtaatta 22881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 29229460 - 29229512
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagt-gtaattatatgtg 84  Q
    |||||| | ||||||||| |||||||||||| ||||||| |||||||||||||    
T  29229460 tgacactgctaataatttgagaaaatcacatgatttagtggtaattatatgtg 29229512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 31015051 - 31015087
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  31015051 taataatttgagaaaatcacataattcagtgtaatta 31015087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 37055907 - 37055871
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  37055907 taataatttgagaaaattacataatttagtgtaatta 37055871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 42004998 - 42004937
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgctgtgtcggtgttggacac 107  Q
    ||||||||| ||||||| ||||||||||||||||| |||    |||| ||||||||||| ||||||    
T  42004998 taataatttgagaaaatgacataatttagtgtaatcata----ggtgttgtgtcggtgtcggacac 42004937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 27093472 - 27093424
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27093472 gacaccgctaataatttaagaaaatcacataatttagtgtaattatatg 27093424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 27184829 - 27184877
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27184829 gacaccgctaataatttaagaaaatcacataatttagtgtaattatatg 27184877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 29787428 - 29787356
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgctgtgtcggtgttggaca 106  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||| ||| ||||   |||||||||||||||    
T  29787428 gacaccgctaataatttgagaaaatcacataattcagtgtaattatgtgttggtgtaatgtcggtgttggaca 29787356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 8160415 - 8160466
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  8160415 tgacaccgctaataatttaagaaaattacataatttagtgtaattatatgtg 8160466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 17851434 - 17851481
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  17851434 accgctaataattttagaaaatcacataattcagtgtaattatatgtg 17851481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 1433454 - 1433504
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  1433454 gacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtg 1433504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 2948683 - 2948733
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||    
T  2948683 gacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtg 2948733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 15902830 - 15902902
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgctgtgtcggtgttggacacaacac 112  Q
    ||||||||| | |||||||||||||||||||||||||||||||  |||| ||||||||| | |||||| ||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacacgacac 15902902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 32308120 - 32308200
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgctgtgtcggtgttggacacaacac 112  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||| ||||||   |||  ||||||||||||||||| ||||    
T  32308120 gacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacac 32308200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 5233635 - 5233679
Alignment:
Q  40 gttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||    
T  5233635 gttaataatttgagaaaatcacataatctagtgtaattatatgtg 5233679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 18213078 - 18213042
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||||||||||||||||||||    
T  18213078 ttttagaaaatcacataatttagtgtaattatatgtg 18213042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 27732300 - 27732248
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| |||||||||||| ||||||| |||||||| ||||||||||||||||    
T  27732300 ttgacaacgttaataatttaagaaaattacataattcagtgtaattatatgtg 27732248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 11700802 - 11700877
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgctgtgtcggtgttggacaca 108  Q
    |||||||||||||||||| | |||||||||||||| | ||||||||| |||  ||| ||| ||||||| |||||||    
T  11700802 tgacaccgttaataatttgacaaaatcacataattcaatgtaattatgtgtctgtgttgtctcggtgtcggacaca 11700877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 3721101 - 3721143
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||||||| ||||||||||||    
T  3721101 taataatttgagaaaatcacataatttagtataattatatgtg 3721143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 7328742 - 7328700
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  7328742 taataatttgagaaaataacataatttagtgtaattatatgtg 7328700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 16341504 - 16341546
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtg 16341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 20549791 - 20549841
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||| ||||| ||||||||||||||||    
T  20549791 gacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtg 20549841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 22602769 - 22602719
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||| ||| |||| |||||||||||||||| ||||||||||||||||    
T  22602769 gacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtg 22602719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 33384641 - 33384591
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||| | ||||||||  |||||||||||||||||||||||    
T  33384641 gacaccgttaataatctgagaaaatcctataatttagtgtaattatatgtg 33384591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 2425790 - 2425742
Alignment:
Q  36 caccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||| |||||||||||||||| |||| || ||||||||    
T  2425790 caccgttaataatttgagaaaatcacataattaagtggaactatatgtg 2425742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 42720951 - 42720899
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||||| | |||||||||||||| | ||||||||||||||    
T  42720951 ttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtg 42720899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 5235986 - 5236033
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||| ||||||||| ||||||| | ||||||||||||||||||||    
T  5235986 gacaccgctaataatttaagaaaattatataatttagtgtaattatat 5236033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 38143230 - 38143273
Alignment:
Q  41 ttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||| | |||||||||||||||| ||||||||||||||    
T  38143230 ttaataatttgaaaaaatcacataatttaatgtaattatatgtg 38143273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 5548676 - 5548726
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| | ||||||| ||||||||| |||||| ||||||||||||||||    
T  5548676 gacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtg 5548726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 12278843 - 12278885
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||    
T  12278843 taataatttaagaaaatgacataattcagtgtaattatatgtg 12278885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 19206050 - 19206100
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||||||||| | | ||||||||||||    
T  19206050 gacaccgctaataatttgagaaaatcacataattcattataattatatgtg 19206100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 22484025 - 22484075
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| |||||||||||||||||  ||||||| ||| ||||||||||||    
T  22484025 gacaccgctaataattttagaaaattgcataattcagtataattatatgtg 22484075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 22868050 - 22868092
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| | |||||||||||||||| ||||||||||||||||    
T  22868050 taataatatgagaaaatcacataattcagtgtaattatatgtg 22868092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 24146824 - 24146866
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||||||||| | | ||||||||||||    
T  24146824 taataattttagaaaatcacataattcaatataattatatgtg 24146866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 26329441 - 26329391
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| |||||||||||| |||||| |||| |||| ||||||||||||||||    
T  26329441 gacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtg 26329391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 49088810 - 49088892
Alignment:
Q  34 gacaccgttaataattttagaaaatcac--ataatttagtgtaattatatgtgggtgctgtgtcggtgttggacacaacacgtgttt 118  Q
    ||||||||||||||||| | ||||||||  |||||||||| |||||||||    |||  |||| ||||||| |||||||||||||||    
T  49088810 gacaccgttaataatttaaaaaaatcacgtataatttagtataattatat----gtgtcgtgttggtgttgaacacaacacgtgttt 49088892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 2424622 - 2424659
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattat 79  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  2424622 taataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 9408386 - 9408349
Alignment:
Q  41 ttaataattttagaaaatcacataatttagtgtaatta 78  Q
    |||||||||| | |||||||||||||||||||||||||    
T  9408386 ttaataatttgaaaaaatcacataatttagtgtaatta 9408349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 23191896 - 23191945
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    ||||||| ||||||||| ||||||||||||| || |||||||||| ||||    
T  23191896 gacaccgctaataatttgagaaaatcacatatttcagtgtaattacatgt 23191945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 35493423 - 35493460
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  35493423 ataatttgagaaaatcacataatttagggtaattatat 35493460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 39138458 - 39138491
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatat 81  Q
    |||||||||||||||||||| |||||||||||||    
T  39138458 ttttagaaaatcacataattcagtgtaattatat 39138491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 6630963 - 6630888
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgctgtgtcggtgttggacacaacacgtg 115  Q
    ||||||||| ||||| |||| ||||| ||||||||||||||||  | ||  |||| ||||| ||||||||||||||    
T  6630963 taataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtg 6630888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 9482944 - 9482984
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||||| |||| ||||||||||||||||    
T  9482944 ataatttgagaaaatcacacaattcagtgtaattatatgtg 9482984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 10377507 - 10377555
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||| ||||||||| | ||||||||| |||||| ||||||||||||||    
T  10377507 gacactgttaataatataagaaaatcatataattcagtgtaattatatg 10377555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 82
Target Start/End: Original strand, 41020516 - 41020544
Alignment:
Q  54 aaaatcacataatttagtgtaattatatg 82  Q
    |||||||||||||||||||||||||||||    
T  41020516 aaaatcacataatttagtgtaattatatg 41020544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 27144463 - 27144513
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||||||||    
T  27144463 gacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtg 27144513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 3966503 - 3966587
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||||||  ||||  ||||| |||| |||||||||| ||||    
T  3966503 gacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgt 3966587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 18592073 - 18592157
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||| ||||| ||| ||||||| |||||||| | ||||||||||||||  ||||  |||||||||| |||||||||||||||    
T  18592073 gacaccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgt 18592157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 36838544 - 36838593
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtg 36838593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 24273090 - 24273038
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 85  Q
    |||||| |||| |||||| |||||||||||||||| |||||||||||||||||    
T  24273090 tgacacagttattaatttgagaaaatcacataattcagtgtaattatatgtgg 24273038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 24389124 - 24389176
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 85  Q
    |||||| |||| |||||| |||||||||||||||| |||||||||||||||||    
T  24389124 tgacacagttattaatttgagaaaatcacataattcagtgtaattatatgtgg 24389176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 35017045 - 35017085
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  35017045 taataatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 6471949 - 6471898
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| | ||||||||| |||||||||||||||| ||||||||||||||||    
T  6471949 tgacacggctaataatttgagaaaatcacataattcagtgtaattatatgtg 6471898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 7175078 - 7175028
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||||| ||||||||||||||||| |  ||||||||||||    
T  7175078 gacaccgttaataatttgagaaaatcacataatttggcataattatatgtg 7175028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 11685939 - 11685989
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| ||||| || ||||||||||||||||||||||||    
T  11685939 gacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtg 11685989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 16203846 - 16203804
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  16203846 taataatttgagaaaatctcataatttagtgtaattatatgtg 16203804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 28588733 - 28588687
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  28588733 gacaccggtaataatttgagaaaatcacataattcagtgtaattata 28588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 2577239 - 2577190
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||| ||||||    
T  2577239 gacaccgataataatttgagaaaatgacataatttagtgtaatcatatgt 2577190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 30502446 - 30502397
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| |||||||||| ||||| ||||||||||||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtg 30502397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 30542789 - 30542740
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| |||||||||| ||||| ||||||||||||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtg 30542740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 14873527 - 14873567
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtg 14873567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 39758286 - 39758322
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||| ||||||||||||||||    
T  39758286 ttttagaaaatcacataattcagtgtaattatatgtg 39758322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 12927662 - 12927701
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  12927662 taataatttgagaaaatcatataatttagtgtaattatat 12927701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 21814275 - 21814345
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||||||| |||  ||||||||||||||||  ||||  |||||||||| |||||| ||||||||    
T  21814275 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21814345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 23016049 - 23016002
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||| ||||||| |||| |||||||||||||||| ||||||||||||    
T  23016049 tgacatcgttaatcatttgagaaaatcacataattcagtgtaattata 23016002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 30098329 - 30098372
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    |||||||||||||| |||||||||||||||| | ||||||||||    
T  30098329 accgttaataatttgagaaaatcacataattcaatgtaattata 30098372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 23012459 - 23012417
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||    
T  23012459 taataatttgagaaaatcatataatttaatgtaattatatgtg 23012417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 23220983 - 23221033
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| | |||||||||||||||||||| || |||||||    
T  23220983 gacaccgctaataatttgataaaatcacataatttagtgttatcatatgtg 23221033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 28262450 - 28262408
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  28262450 cgttgataatttgagaaaatcacataatttagggtaattatat 28262408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 41091308 - 41091266
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| |||| |||||||||||||||| ||||||||||||||||    
T  41091308 taatgatttgagaaaatcacataattcagtgtaattatatgtg 41091266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 17593783 - 17593734
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||| |||| ||||||||| |||||||||| ||||| |||||||||||||    
T  17593783 ttgaaaccgctaataatttgagaaaatcacgtaattcagtgtaattatat 17593734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 21522758 - 21522834
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||| ||||| |||||||| |||||||||| |  ||| ||||  |||||||||| |||||| ||||||||    
T  21522758 taataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21522834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 21533324 - 21533400
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||| ||||| |||||||| |||||||||| |  ||| ||||  |||||||||| |||||| ||||||||    
T  21533324 taataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21533400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 14674277 - 14674313
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  14674277 taataatttgaaaaaatcacataatttagtgtaatta 14674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 18421890 - 18421850
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| |||||||||||||||  ||||||||||||||||    
T  18421890 ataatttgagaaaatcacataatccagtgtaattatatgtg 18421850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 19429438 - 19429482
Alignment:
Q  40 gttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||| |||||||||||||| ||||||||| ||| ||||    
T  19429438 gttaataatttgagaaaatcacataacttagtgtaaatatctgtg 19429482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 19579709 - 19579745
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  19579709 taataatttgagaaaatcacataatttagtgcaatta 19579745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 33178033 - 33178069
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  33178033 taataatttaaaaaaatcacataatttagtgtaatta 33178069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 25829 - 25781
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  25829 ttgacacggttaataattagagaaaatcacataatttagtgtaattata 25781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 53189 - 53264
Alignment:
Q  43 aataattttagaaaatcacataatttagtgtaattata--tgtgggtgctgtgtcggtgttggacacaacacgtgt 116  Q
    |||||||| |||||||||||||||| ||||||||||||  ||| ||||| |||||||||| |||||  ||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgt 53264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 28850 - 28900
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||||| |||||||| ||||||| | ||||||||||||||    
T  28850 gacaccgttaataatttaagaaaatcgcataattcaatgtaattatatgtg 28900  T

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Target: scaffold0022 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 99893 - 99943
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||||||||||| |||||||| | ||||||||||||||    
T  99893 gacaccgataataattttagaaaataacataattcaatgtaattatatgtg 99943  T

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Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 90844 - 90890
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||| |||||||||| ||||||||| |||||| |||||||||||||    
T  90844 acaccattaataatttgagaaaatcatataattcagtgtaattatat 90890  T

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Target: scaffold1528 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 1035 - 1114
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg--gtgctgtgtcggtgttggacacaaca 111  Q
    ||||||| ||||||||| | ||||| |||||||| ||||||| ||||||||   |||  |||||||||||||||||||||    
T  1035 gacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaaca 1114  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 68299 - 68255
Alignment:
Q  36 caccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||    
T  68299 caccgttaataatttgagaaaatcatataatttagtataattata 68255  T

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Target: scaffold0697 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 1644 - 1690
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||||||||||||| ||||||||| ||||||| || ||||||||    
T  1644 gacaccgttaataatttgagaaaatcatataatttggtataattata 1690  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 9798 - 9756
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||    
T  9798 taataatttgagaaaatcacttaattcagtgtaattatatgtg 9756  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 135363 - 135321
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||||||||||||  |||||||||||||||    
T  135363 taataatttgagaaaatcacataattctgtgtaattatatgtg 135321  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 3908 - 3864
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  3908 gacacggttaataatttaaaaaaatcacataattcagtgtaatta 3864  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 46682 - 46726
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  46682 gacacagttaataatttgaaaaaatcacataattcagtgtaatta 46726  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 192308 - 192264
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||||||||||| ||||||| ||||||||  |||||||||    
T  192308 gacaccgttaataatttgagaaaattacataattcggtgtaatta 192264  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 17800 - 17764
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  17800 taataatttgaaaaaatcacataatttagtgtaatta 17764  T

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