View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0942_high_31 (Length: 435)

Name: NF0942_high_31
Description: NF0942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0942_high_31
NF0942_high_31
[»] chr2 (33 HSPs)
chr2 (1-273)||(2665790-2666062)
chr2 (115-198)||(44860319-44860404)
chr2 (130-194)||(34784961-34785027)
chr2 (116-166)||(21616762-21616812)
chr2 (119-165)||(36281688-36281734)
chr2 (117-198)||(2331795-2331876)
chr2 (117-166)||(30527604-30527653)
chr2 (130-166)||(20922937-20922973)
chr2 (137-198)||(28524447-28524510)
chr2 (117-198)||(22084805-22084890)
chr2 (116-166)||(23718026-23718076)
chr2 (116-166)||(24105698-24105748)
chr2 (116-166)||(31808077-31808127)
chr2 (116-166)||(37411253-37411303)
chr2 (115-199)||(4207856-4207941)
chr2 (117-170)||(28412351-28412404)
chr2 (116-165)||(28677909-28677958)
chr2 (117-162)||(31018591-31018636)
chr2 (117-166)||(35449514-35449563)
chr2 (117-166)||(39279676-39279725)
chr2 (66-163)||(40361766-40361862)
chr2 (130-166)||(20242736-20242772)
chr2 (116-167)||(19573978-19574029)
chr2 (119-162)||(23921256-23921299)
chr2 (134-198)||(35056886-35056952)
chr2 (116-171)||(36409631-36409686)
chr2 (124-166)||(5367200-5367242)
chr2 (116-166)||(16069263-16069313)
chr2 (116-166)||(18276521-18276571)
chr2 (121-163)||(35191591-35191633)
chr2 (124-161)||(21782832-21782869)
chr2 (116-160)||(30404865-30404909)
chr2 (129-198)||(38355862-38355933)
[»] scaffold0123 (1 HSPs)
scaffold0123 (115-198)||(44500-44585)
[»] chr8 (39 HSPs)
chr8 (115-186)||(11803258-11803331)
chr8 (116-166)||(39954288-39954338)
chr8 (116-166)||(4786347-4786397)
chr8 (88-166)||(7472524-7472602)
chr8 (124-166)||(14731720-14731762)
chr8 (116-166)||(34897085-34897135)
chr8 (122-166)||(33405393-33405437)
chr8 (66-198)||(2572031-2572164)
chr8 (116-166)||(11927095-11927145)
chr8 (124-166)||(13844605-13844647)
chr8 (124-195)||(15816107-15816180)
chr8 (116-166)||(24362211-24362261)
chr8 (116-165)||(4611534-4611583)
chr8 (119-164)||(13018284-13018329)
chr8 (117-166)||(20785474-20785523)
chr8 (124-193)||(29776044-29776113)
chr8 (114-166)||(12570517-12570569)
chr8 (88-160)||(24669406-24669477)
chr8 (122-162)||(31580140-31580180)
chr8 (124-163)||(14134707-14134746)
chr8 (124-162)||(3025559-3025597)
chr8 (74-160)||(4298901-4298985)
chr8 (116-166)||(11944665-11944715)
chr8 (121-163)||(24447034-24447076)
chr8 (124-166)||(27213555-27213597)
chr8 (124-166)||(31236586-31236628)
chr8 (124-166)||(34222955-34222997)
chr8 (114-163)||(12570746-12570795)
chr8 (126-163)||(26529751-26529788)
chr8 (133-166)||(26902184-26902217)
chr8 (117-166)||(33382028-33382077)
chr8 (118-171)||(37283814-37283867)
chr8 (124-160)||(8342980-8343016)
chr8 (124-160)||(8343324-8343360)
chr8 (115-155)||(18067954-18067994)
chr8 (130-166)||(18964191-18964227)
chr8 (98-162)||(20679408-20679471)
chr8 (124-160)||(20873077-20873113)
chr8 (126-175)||(22493504-22493555)
[»] chr3 (40 HSPs)
chr3 (116-166)||(32804549-32804599)
chr3 (119-166)||(49505163-49505210)
chr3 (124-166)||(11313809-11313851)
chr3 (116-166)||(16192759-16192809)
chr3 (116-198)||(25064909-25064991)
chr3 (116-198)||(55212963-55213046)
chr3 (125-197)||(15812799-15812871)
chr3 (123-183)||(2731819-2731881)
chr3 (124-204)||(11665952-11666034)
chr3 (117-163)||(4201397-4201443)
chr3 (116-166)||(7928450-7928500)
chr3 (117-188)||(8039820-8039893)
chr3 (115-222)||(34307737-34307840)
chr3 (124-198)||(4987266-4987342)
chr3 (124-198)||(14209121-14209197)
chr3 (117-162)||(14840304-14840349)
chr3 (116-198)||(15796269-15796353)
chr3 (124-161)||(27277852-27277889)
chr3 (116-160)||(10268501-10268545)
chr3 (116-163)||(7614427-7614474)
chr3 (116-163)||(8842330-8842376)
chr3 (116-163)||(10690274-10690321)
chr3 (124-171)||(11251986-11252033)
chr3 (127-166)||(15314885-15314924)
chr3 (119-166)||(38731221-38731268)
chr3 (124-194)||(2620034-2620104)
chr3 (116-162)||(8383257-8383303)
chr3 (116-166)||(25093502-25093552)
chr3 (121-159)||(28098143-28098181)
chr3 (124-166)||(48202278-48202320)
chr3 (115-160)||(1509538-1509583)
chr3 (115-164)||(9624640-9624689)
chr3 (121-166)||(11658820-11658865)
chr3 (124-165)||(12704015-12704056)
chr3 (124-198)||(17005594-17005670)
chr3 (126-166)||(8789559-8789599)
chr3 (124-164)||(11493372-11493412)
chr3 (88-160)||(26508083-26508154)
chr3 (130-166)||(35222952-35222988)
chr3 (124-160)||(55401083-55401119)
[»] chr7 (42 HSPs)
chr7 (88-194)||(15902795-15902902)
chr7 (116-188)||(29787356-29787428)
chr7 (116-194)||(32308120-32308200)
chr7 (116-164)||(27093424-27093472)
chr7 (116-164)||(27184829-27184877)
chr7 (115-166)||(8160415-8160466)
chr7 (115-190)||(11700802-11700877)
chr7 (119-166)||(17851434-17851481)
chr7 (116-166)||(1433454-1433504)
chr7 (116-166)||(2948683-2948733)
chr7 (122-177)||(5233635-5233692)
chr7 (82-163)||(5235953-5236033)
chr7 (130-166)||(18213042-18213078)
chr7 (114-166)||(27732248-27732300)
chr7 (124-166)||(3721101-3721143)
chr7 (124-166)||(7328700-7328742)
chr7 (124-166)||(16341504-16341546)
chr7 (116-166)||(20549791-20549841)
chr7 (116-166)||(22602719-22602769)
chr7 (116-166)||(33384591-33384641)
chr7 (116-200)||(49088810-49088892)
chr7 (89-166)||(2425742-2425818)
chr7 (116-198)||(26329357-26329441)
chr7 (124-197)||(6630888-6630963)
chr7 (114-166)||(42720899-42720951)
chr7 (124-196)||(24339650-24339724)
chr7 (123-166)||(38143230-38143273)
chr7 (116-166)||(5548676-5548726)
chr7 (124-166)||(12278843-12278885)
chr7 (116-166)||(19206050-19206100)
chr7 (116-166)||(22484025-22484075)
chr7 (124-166)||(22868050-22868092)
chr7 (124-166)||(24146824-24146866)
chr7 (116-182)||(30731037-30731103)
chr7 (124-161)||(2424622-2424659)
chr7 (123-160)||(9408349-9408386)
chr7 (116-165)||(23191896-23191945)
chr7 (126-163)||(35493423-35493460)
chr7 (130-163)||(39138458-39138491)
chr7 (126-166)||(9482944-9482984)
chr7 (116-164)||(10377507-10377555)
chr7 (136-164)||(41020516-41020544)
[»] chr6 (53 HSPs)
chr6 (96-198)||(25038046-25038149)
chr6 (116-166)||(5732519-5732569)
chr6 (66-198)||(16766648-16766781)
chr6 (124-166)||(7086803-7086845)
chr6 (116-166)||(19040352-19040402)
chr6 (70-160)||(25096378-25096467)
chr6 (117-171)||(31579229-31579283)
chr6 (116-194)||(5970087-5970167)
chr6 (117-166)||(7265602-7265651)
chr6 (124-177)||(8805570-8805623)
chr6 (115-163)||(5462685-5462733)
chr6 (116-163)||(9658879-9658926)
chr6 (130-198)||(16488565-16488635)
chr6 (115-162)||(32511679-32511726)
chr6 (124-166)||(9025503-9025545)
chr6 (124-166)||(9195763-9195805)
chr6 (116-166)||(10842532-10842582)
chr6 (116-166)||(10888983-10889033)
chr6 (124-166)||(17302355-17302397)
chr6 (116-162)||(17341677-17341723)
chr6 (124-198)||(7248366-7248442)
chr6 (117-166)||(30866153-30866202)
chr6 (117-166)||(32298616-32298665)
chr6 (122-202)||(4118304-4118386)
chr6 (119-166)||(9617437-9617484)
chr6 (75-166)||(13851696-13851786)
chr6 (117-167)||(1532241-1532291)
chr6 (124-166)||(7151420-7151462)
chr6 (116-166)||(7377979-7378029)
chr6 (116-194)||(8713979-8714060)
chr6 (116-166)||(9027178-9027228)
chr6 (116-166)||(9629383-9629433)
chr6 (128-166)||(11591879-11591917)
chr6 (127-165)||(13360382-13360420)
chr6 (124-238)||(17435207-17435324)
chr6 (124-166)||(24832596-24832638)
chr6 (124-166)||(26178690-26178732)
chr6 (128-166)||(26562701-26562739)
chr6 (121-163)||(32248937-32248979)
chr6 (115-165)||(32320679-32320729)
chr6 (117-159)||(34447374-34447416)
chr6 (77-162)||(7625084-7625168)
chr6 (124-182)||(9522899-9522959)
chr6 (72-198)||(10294064-10294191)
chr6 (124-165)||(24833243-24833284)
chr6 (124-182)||(34073338-34073398)
chr6 (116-164)||(677837-677885)
chr6 (124-164)||(7996389-7996429)
chr6 (124-164)||(8022372-8022412)
chr6 (114-166)||(14721239-14721291)
chr6 (134-166)||(17327664-17327696)
chr6 (124-160)||(17841604-17841640)
chr6 (114-166)||(21885790-21885842)
[»] chr1 (63 HSPs)
chr1 (124-198)||(12713302-12713378)
chr1 (124-198)||(12717393-12717469)
chr1 (116-166)||(39953155-39953205)
chr1 (116-163)||(34257922-34257969)
chr1 (126-194)||(44482240-44482310)
chr1 (116-166)||(1864889-1864939)
chr1 (72-166)||(9709777-9709870)
chr1 (77-166)||(7918220-7918308)
chr1 (124-198)||(12707848-12707924)
chr1 (124-165)||(14332652-14332693)
chr1 (113-162)||(25272479-25272528)
chr1 (116-193)||(17754311-17754390)
chr1 (123-166)||(39130776-39130819)
chr1 (116-166)||(2784556-2784606)
chr1 (116-166)||(13997883-13997933)
chr1 (116-166)||(25098564-25098614)
chr1 (126-189)||(25361896-25361961)
chr1 (116-198)||(26238091-26238171)
chr1 (115-198)||(34371713-34371797)
chr1 (124-166)||(34712392-34712434)
chr1 (116-162)||(36878461-36878507)
chr1 (117-166)||(6427351-6427400)
chr1 (124-198)||(16164290-16164366)
chr1 (124-165)||(40181879-40181920)
chr1 (66-162)||(1486722-1486817)
chr1 (126-166)||(19324572-19324612)
chr1 (130-166)||(30749854-30749890)
chr1 (130-166)||(30771305-30771341)
chr1 (116-160)||(41877485-41877529)
chr1 (124-189)||(42004937-42004998)
chr1 (100-163)||(48148049-48148112)
chr1 (76-159)||(15323124-15323206)
chr1 (117-189)||(36905998-36906072)
chr1 (119-166)||(52903252-52903299)
chr1 (116-162)||(398778-398824)
chr1 (82-156)||(2896140-2896213)
chr1 (124-166)||(10233261-10233303)
chr1 (124-166)||(12443469-12443511)
chr1 (124-166)||(13436466-13436508)
chr1 (116-166)||(17425102-17425152)
chr1 (116-166)||(17831540-17831590)
chr1 (116-166)||(20157359-20157409)
chr1 (116-162)||(21530689-21530735)
chr1 (117-163)||(28674801-28674847)
chr1 (116-166)||(32724107-32724157)
chr1 (124-162)||(34298444-34298482)
chr1 (124-166)||(35999331-35999373)
chr1 (116-166)||(38503320-38503370)
chr1 (124-198)||(9828052-9828128)
chr1 (124-182)||(10572580-10572640)
chr1 (126-163)||(20131987-20132024)
chr1 (124-198)||(32461439-32461514)
chr1 (130-163)||(45534202-45534235)
chr1 (124-194)||(47989505-47989577)
chr1 (116-164)||(5898277-5898325)
chr1 (72-160)||(16297298-16297385)
chr1 (66-110)||(18190164-18190208)
chr1 (124-160)||(22515902-22515938)
chr1 (124-160)||(22881631-22881667)
chr1 (133-198)||(25934633-25934700)
chr1 (115-166)||(29229460-29229512)
chr1 (124-160)||(31015051-31015087)
chr1 (124-160)||(37055871-37055907)
[»] chr4 (34 HSPs)
chr4 (116-166)||(22440609-22440659)
chr4 (118-165)||(903924-903971)
chr4 (88-163)||(21539879-21539953)
chr4 (116-166)||(5775367-5775417)
chr4 (126-166)||(13134460-13134500)
chr4 (116-162)||(8423731-8423777)
chr4 (116-166)||(11931280-11931330)
chr4 (124-166)||(36635332-36635374)
chr4 (116-166)||(40613450-40613500)
chr4 (116-166)||(40742591-40742641)
chr4 (124-164)||(7214533-7214573)
chr4 (134-166)||(10499279-10499311)
chr4 (127-166)||(17876166-17876205)
chr4 (118-198)||(30982853-30982935)
chr4 (116-196)||(38148702-38148784)
chr4 (130-198)||(46083966-46084036)
chr4 (124-166)||(999357-999399)
chr4 (121-163)||(3731208-3731250)
chr4 (124-158)||(17446079-17446113)
chr4 (136-195)||(19500836-19500897)
chr4 (124-166)||(33950144-33950186)
chr4 (114-164)||(40179647-40179697)
chr4 (116-166)||(48139264-48139314)
chr4 (124-178)||(49652969-49653023)
chr4 (96-161)||(2234231-2234295)
chr4 (123-160)||(6485626-6485663)
chr4 (117-166)||(16189710-16189759)
chr4 (129-166)||(17344513-17344550)
chr4 (136-198)||(22234865-22234929)
chr4 (123-160)||(27706192-27706229)
chr4 (121-166)||(44081586-44081631)
chr4 (116-189)||(7012066-7012141)
chr4 (125-165)||(9996849-9996889)
chr4 (126-166)||(18576046-18576086)
[»] chr5 (36 HSPs)
chr5 (116-198)||(3966503-3966587)
chr5 (116-198)||(18592073-18592157)
chr5 (116-166)||(27144463-27144513)
chr5 (116-198)||(11685939-11686022)
chr5 (117-166)||(36838544-36838593)
chr5 (115-167)||(24273038-24273090)
chr5 (115-167)||(24389124-24389176)
chr5 (124-164)||(35017045-35017085)
chr5 (115-166)||(6471898-6471949)
chr5 (130-198)||(21814275-21814345)
chr5 (116-166)||(7175028-7175078)
chr5 (124-166)||(16203804-16203846)
chr5 (72-166)||(23220940-23221033)
chr5 (116-162)||(28588687-28588733)
chr5 (116-165)||(2577190-2577239)
chr5 (124-198)||(21522758-21522834)
chr5 (124-198)||(21533324-21533400)
chr5 (117-166)||(30502397-30502446)
chr5 (117-166)||(30542740-30542789)
chr5 (126-166)||(14873527-14873567)
chr5 (130-166)||(39758286-39758322)
chr5 (130-198)||(6401512-6401582)
chr5 (124-163)||(12927662-12927701)
chr5 (115-162)||(23016002-23016049)
chr5 (119-162)||(30098329-30098372)
chr5 (124-166)||(23012417-23012459)
chr5 (121-163)||(28262408-28262450)
chr5 (116-179)||(38749557-38749622)
chr5 (124-166)||(41091266-41091308)
chr5 (114-163)||(17593734-17593783)
chr5 (124-160)||(14674277-14674313)
chr5 (126-166)||(18421850-18421890)
chr5 (122-166)||(19429438-19429482)
chr5 (124-160)||(19579709-19579745)
chr5 (72-160)||(21191071-21191158)
chr5 (124-160)||(33178033-33178069)
[»] scaffold1528 (1 HSPs)
scaffold1528 (116-193)||(1035-1114)
[»] scaffold0236 (1 HSPs)
scaffold0236 (114-162)||(25781-25829)
[»] scaffold0110 (1 HSPs)
scaffold0110 (116-177)||(28850-28913)
[»] scaffold0022 (2 HSPs)
scaffold0022 (116-166)||(99893-99943)
scaffold0022 (117-163)||(90844-90890)
[»] scaffold0044 (1 HSPs)
scaffold0044 (125-198)||(53189-53264)
[»] scaffold0027 (1 HSPs)
scaffold0027 (72-160)||(46639-46726)
[»] scaffold0024 (1 HSPs)
scaffold0024 (118-162)||(68255-68299)
[»] scaffold0008 (1 HSPs)
scaffold0008 (124-204)||(263341-263423)
[»] scaffold0697 (1 HSPs)
scaffold0697 (116-162)||(1644-1690)
[»] scaffold0168 (1 HSPs)
scaffold0168 (72-166)||(21000-21093)
[»] scaffold0036 (1 HSPs)
scaffold0036 (124-166)||(9756-9798)
[»] scaffold0020 (1 HSPs)
scaffold0020 (124-166)||(135321-135363)
[»] scaffold0003 (1 HSPs)
scaffold0003 (136-198)||(241614-241678)
[»] scaffold0136 (1 HSPs)
scaffold0136 (116-160)||(3864-3908)
[»] scaffold0018 (1 HSPs)
scaffold0018 (116-160)||(192264-192308)
[»] scaffold0011 (1 HSPs)
scaffold0011 (124-160)||(17764-17800)


Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 2666062 - 2665790
Alignment:
Q  1 ttcttcatcaggcacacaatcacactcacatatcacattaaaatattgtcttaatattttgttatgcatgtatacggacatggacatcggacacaacaca 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2666062 ttcttcatcaggcacacaatcaccctcacatatcatattaaaatattgtcttaatattttgttatgcatgtatacggatatggacatcggacacaacaca 2665963  T
Q  101 gatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgttt 200  Q
    |||| |||||||| | |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2665962 gatagtgacatgtctaacaccactaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttgaacacaacacgtgttt 2665863  T
Q  201 gataatgatgcacgtctaatccgaaaagtgccgtacttggtagttatcgacatacaatgattattataaaact 273  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||    
T  2665862 gataatgatgcacgtctaatccgaaaagtgtcgtacttcgtagttatcgacgtacaatgattattataaaact 2665790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 44860319 - 44860404
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    |||||||| ||||||||| |||||||| ||||||| ||||||||||||||||  ||||| |||| |||||||||||| ||| ||||    
T  44860319 tgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgt 44860404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 34785027 - 34784961
Alignment:
Q  130 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacac 194  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||||||| | |||||| ||||    
T  34785027 ttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacac 34784961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 21616762 - 21616812
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  21616762 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 21616812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 36281688 - 36281734
Alignment:
Q  119 accgttaataattttagaaaatcacataatttagtgtaattatatgt 165  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  36281688 accgttaataatttgagaaaatcacataatttagtgtaatcatatgt 36281734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 2331795 - 2331876
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||| |||||||||| |||||||||||||||| |||||| |||| ||| ||||| ||||| |||| || |||| |||||||    
T  2331795 acaccattaataatttgagaaaatcacataattcagtgtatttatgtgtcggtgtcgtgtcagtgtcgggcacagcacgtgt 2331876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 30527653 - 30527604
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  30527653 acactgttaataatttgagaaaatcatataatttagtgtaattatatgtg 30527604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 20922973 - 20922937
Alignment:
Q  130 ttttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||||||||||||||||||||||||||||    
T  20922973 ttttagaaaatcacataatttagtgtaattatatgtg 20922937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 28524447 - 28524510
Alignment:
Q  137 aaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||||||| ||||||||||||||||  | |||||||| ||||| |||||||||||||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacacaacacgtgt 28524510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 22084890 - 22084805
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaa--ttatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    |||||||||||||||| ||||||||| |||||| |||||||  |||||||||  ||| | ||||| |||| |||||||||||||||    
T  22084890 acaccgttaataatttgagaaaatcatataattcagtgtaattttatatgtgccggtatcgtgtcagtgtcggacacaacacgtgt 22084805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 23718026 - 23718076
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| ||||| |||||||||| ||||||||||||||||    
T  23718026 gacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 23718076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 24105698 - 24105748
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| ||||| |||||||||| ||||||||||||||||    
T  24105698 gacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 24105748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 31808077 - 31808127
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| | |||||||||||||| ||||||||||||||||    
T  31808077 gacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtg 31808127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 37411303 - 37411253
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| |||||||||||||||| ||||| ||||||||||    
T  37411303 gacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtg 37411253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 4207856 - 4207941
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattata-tgtgggtgttgtgtcggtgttggacacaacacgtgtt 199  Q
    |||||||  ||||||||| | |||| | |||||||||||||||||||| ||| ||| | |||||||||| |||||| |||||||||    
T  4207856 tgacaccactaataatttgaaaaaagcgcataatttagtgtaattatattgtcggtatcgtgtcggtgtcggacacgacacgtgtt 4207941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 28412351 - 28412404
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtg 170  Q
    |||||||||||||||| | |||||||||||||| ||||||||||| ||| ||||    
T  28412351 acaccgttaataatttgataaaatcacataattcagtgtaattatgtgtcggtg 28412404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 28677909 - 28677958
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 165  Q
    ||||||| ||||||||| | |||||||||||||| |||||||||||||||    
T  28677909 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 31018591 - 31018636
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    |||||| ||||||||| |||||||||||| ||||||||||||||||    
T  31018591 acaccgctaataatttcagaaaatcacatgatttagtgtaattata 31018636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 35449514 - 35449563
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||| ||||||||||| ||||||||||| |||| ||||||||||||||||    
T  35449514 acactgttaataatttgagaaaatcacagaattcagtgtaattatatgtg 35449563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 39279676 - 39279725
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||||| | ||||||||| |||||| ||||||||||||||||    
T  39279676 acaccgttaataatatgagaaaatcaaataattcagtgtaattatatgtg 39279725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 40361862 - 40361766
Alignment:
Q  66 gcatgtatacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    ||||| ||||||||| ||| | || |||| |||||||||| ||||  | ||||||  |||||||||| | ||||| ||||||||||||||||||||||    
T  40361862 gcatggatacggacacggataccgaacacgacacagatacggacac-tatgacactattaataatttgaaaaaattacataatttagtgtaattatat 40361766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 20242772 - 20242736
Alignment:
Q  130 ttttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||||||||||| ||||||||||||||||    
T  20242772 ttttagaaaatcacataattcagtgtaattatatgtg 20242736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 19573978 - 19574029
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 167  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||||||| ||||    
T  19573978 gacaccgataataatttaagaaaataacataattcagtgtaattataggtgg 19574029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 23921256 - 23921299
Alignment:
Q  119 accgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    |||||||||||||| ||||||| |||||||| ||||||||||||    
T  23921256 accgttaataatttgagaaaattacataattcagtgtaattata 23921299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 35056886 - 35056952
Alignment:
Q  134 agaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    |||||| || |||||| ||||||||||||||||  ||||| |||||||||| |||||| ||||||||    
T  35056886 agaaaaccatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 35056952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 36409686 - 36409631
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgt 171  Q
    ||||||| | ||||||| | |||||||||||||||||||||||||| ||| |||||    
T  36409686 gacaccgctgataatttgaaaaaatcacataatttagtgtaattatgtgtcggtgt 36409631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 5367200 - 5367242
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtg 5367242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 16069313 - 16069263
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||||||||||| | ||||||| |||||| ||||||||||| ||||    
T  16069313 gacaccgttaataatttaaaaaaatcatataattcagtgtaattatttgtg 16069263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 18276521 - 18276571
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| |||||||||| ||||| ||||||||||| ||||    
T  18276521 gacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtg 18276571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 35191633 - 35191591
Alignment:
Q  121 cgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  35191633 cgttgataatttgagaaaatcacataatttagggtaattatat 35191591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 21782869 - 21782832
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattat 161  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  21782869 taataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 30404909 - 30404865
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  30404909 gacacggttaataatttgaaaaaatcacataattcagtgtaatta 30404865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 38355933 - 38355862
Alignment:
Q  129 attttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    |||| |||||||||||||||| ||||| ||||||||||  |||||  | | ||||||||| |||||||||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggatacaacacgtgt 38355862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 44585 - 44500
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||||||||  ||| | ||||||||||||||||||||||||||    
T  44585 tgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgt 44500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 11803258 - 11803331
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttgga 186  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||||||||||  |||||||||| |||||||||    
T  11803258 tgacactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgttgga 11803331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 39954338 - 39954288
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  39954338 gacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 4786397 - 4786347
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  4786397 gacaccattaataatttaagaaaatcacataattcagtgtaattatatgtg 4786347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 166
Target Start/End: Complemental strand, 7472602 - 7472524
Alignment:
Q  88 cggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||| || |||||||| || ||||||  ||||||||| |  ||||||||||| ||||||||||||||||||    
T  7472602 cggacacaacacggaaactgacatattcgacaccactaataatttaaagaaatcacataaattagtgtaattatatgtg 7472524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 14731720 - 14731762
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  14731720 taataatttgagaaaatcacataatttagtgtaattatatgtg 14731762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 34897085 - 34897135
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  34897085 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 34897135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 33405437 - 33405393
Alignment:
Q  122 gttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||    
T  33405437 gttaataatttgagaaaaacacataatttagtgtaattatatgtg 33405393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 2572164 - 2572031
Alignment:
Q  66 gcatgtatacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattata--t 163  Q
    ||||| ||||||||| |||||  |||||| |||| ||||| |||| ||  |||||   ||||||||| | ||||||||||||||||||||||||| |  |    
T  2572164 gcatggatacggacacggacactggacacgacacggataccgacacgtc-gacacacctaataatttgaaaaaatcacataatttagtgtaattacaagt 2572066  T
Q  164 gtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    || ||||| ||||| |||| |||||| ||||||||    
T  2572065 gtcggtgtcgtgtctgtgtcggacacgacacgtgt 2572031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 11927145 - 11927095
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||||||||    
T  11927145 gacactgttaataatttgataaaatcacataattcagtgtaattatatgtg 11927095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 13844647 - 13844605
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  13844647 taataatttgagaaaatcacataattgagtgtaattatatgtg 13844605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 15816180 - 15816107
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacg 195  Q
    ||||||||| | |||||||||||||||||||||||||||  ||| ||||| |||| ||||| |||||| |||||    
T  15816180 taataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacg 15816107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 24362261 - 24362211
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| ||| |||||||||||| ||||||||||||||||    
T  24362261 gacaccgctaataatttgagagaatcacataattcagtgtaattatatgtg 24362211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 4611534 - 4611583
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 165  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||||||||||    
T  4611534 gacaccgctaataatttgagaaaataacataattcagtgtaattatatgt 4611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 13018284 - 13018329
Alignment:
Q  119 accgttaataattttagaaaatcacataatttagtgtaattatatg 164  Q
    |||||||||||||| | ||||||||||||||||||||||| |||||    
T  13018284 accgttaataatttgacaaaatcacataatttagtgtaatgatatg 13018329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 20785523 - 20785474
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| ||||||||| || ||||||||||||||| ||||||||||||||    
T  20785523 acaccgctaataatttgaggaaatcacataatttaatgtaattatatgtg 20785474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 193
Target Start/End: Original strand, 29776044 - 29776113
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaaca 193  Q
    ||||||||| |||||||||| ||||| ||| ||||||||||| ||||||  ||| |||| ||||||||||    
T  29776044 taataatttgagaaaatcacgtaattcagtataattatatgtcggtgttaagtcagtgtcggacacaaca 29776113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 12570569 - 12570517
Alignment:
Q  114 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| | ||||||||| |||||| ||||||||| ||||||||||||||||    
T  12570569 ttgacactgctaataatttaagaaaaacacataattaagtgtaattatatgtg 12570517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 24669406 - 24669477
Alignment:
Q  88 cggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||| ||||||| ||||||| | | ||||||||||||||||| || |||| |||||||| ||||||||||    
T  24669406 cggacacgacacagacactgacacgct-gacaccgttaataatttgaggaaattacataattcagtgtaatta 24669477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 31580180 - 31580140
Alignment:
Q  122 gttaataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  31580180 gttaataatttaagaaaatcacataattgagtgtaattata 31580140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 14134707 - 14134746
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatat 163  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaattatat 14134746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 3025559 - 3025597
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattata 3025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 4298985 - 4298901
Alignment:
Q  74 acggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||| ||||||| ||||||| ||||||||||| ||| |   ||||| ||||||||||| | |||||||||||||||| ||||||||    
T  4298985 acggatatggaca-cggacacgacacagatactaacacgcc-gacacagttaataatttgaaaaaatcacataatttaatgtaatta 4298901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 11944665 - 11944715
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||| ||||||||||| | |||||||||||| | ||||||||||||||||    
T  11944665 gacactgttaataatttgataaaatcacataactcagtgtaattatatgtg 11944715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 24447034 - 24447076
Alignment:
Q  121 cgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  24447034 cgttgataatttgagaaaatcacataatttagggtaattatat 24447076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 27213555 - 27213597
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| |||||||||||||||| | ||||||||||||||    
T  27213555 taataatttcagaaaatcacataattcactgtaattatatgtg 27213597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 31236628 - 31236586
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| |||||||||||||||| | ||||||||||||||    
T  31236628 taataatttgagaaaatcacataattcaatgtaattatatgtg 31236586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 34222955 - 34222997
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| | |||||||||||||| ||||||||||||||||    
T  34222955 taataatttaataaaatcacataattaagtgtaattatatgtg 34222997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 12570795 - 12570746
Alignment:
Q  114 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    ||||||||| ||||||||| |||||| | ||||||| |||||||||||||    
T  12570795 ttgacaccgctaataatttaagaaaaacgcataattaagtgtaattatat 12570746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 26529751 - 26529788
Alignment:
Q  126 ataattttagaaaatcacataatttagtgtaattatat 163  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  26529751 ataatttgagaaaatcacataatttagggtaattatat 26529788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 26902217 - 26902184
Alignment:
Q  133 tagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||||||||||| ||||||||||||||||    
T  26902217 tagaaaatcacataattcagtgtaattatatgtg 26902184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 33382077 - 33382028
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| ||||||||| ||||||| |||||||| || |||||||||||||    
T  33382077 acaccgataataatttaagaaaatgacataattcagagtaattatatgtg 33382028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 37283867 - 37283814
Alignment:
Q  118 caccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgt 171  Q
    ||||| ||||||| | |||||||||||||||| ||||||||||| ||| |||||    
T  37283867 caccgctaataatctgagaaaatcacataattcagtgtaattatgtgtcggtgt 37283814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 8342980 - 8343016
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||| | |||||||||||||||||||||||||    
T  8342980 taataatttgaaaaaatcacataatttagtgtaatta 8343016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 8343324 - 8343360
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||| | |||||||||||||||||||||||||    
T  8343324 taataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 18067994 - 18067954
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgt 155  Q
    |||||||| ||||||||| |||||||||||||||| |||||    
T  18067994 tgacaccgctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 18964191 - 18964227
Alignment:
Q  130 ttttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||||||||||| | ||||||||||||||    
T  18964191 ttttagaaaatcacataattcaatgtaattatatgtg 18964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 20679471 - 20679408
Alignment:
Q  98 acagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||| ||||||||||  ||||||  ||||||||| ||||||||||||| || ||||||||||||    
T  20679471 acagacactgacatgtc-gacacccctaataatttgagaaaatcacatagttcagtgtaattata 20679408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 20873077 - 20873113
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||| | |||||||||||||||||||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaatta 20873113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 22493504 - 22493555
Alignment:
Q  126 ataattttagaaaatcacataatttagtgtaat--tatatgtgggtgttgtg 175  Q
    ||||||||| |||||||||||||| ||||||||  ||||||| |||||||||    
T  22493504 ataattttaaaaaatcacataattcagtgtaatcatatatgtcggtgttgtg 22493555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 32804599 - 32804549
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32804599 gacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtg 32804549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 49505210 - 49505163
Alignment:
Q  119 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  49505210 accgctaataatttgagaaaatcacataatttagtgtaattatatgtg 49505163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 11313851 - 11313809
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  11313851 taataatttgagaaaatcacataatttagtgtaattatatgtg 11313809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 16192809 - 16192759
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||||||||||    
T  16192809 gacaccgttaataatttgagaaaataacataattcagtgtaattatatgtg 16192759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 25064909 - 25064991
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||| |||| |||| | |||||||||||||||||||||||||| ||| ||| | |||| ||||| |||||| ||||||||    
T  25064909 gacaccgctaatgatttgaaaaaatcacataatttagtgtaattatgtgttggtatcgtgttggtgtcggacacgacacgtgt 25064991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 55212963 - 55213046
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||| |  ||| |||| ||||||||||| || ||||||||||||    
T  55212963 gacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcggtg-tgtgtcggtgtcgggcacaacacgtgt 55213046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 15812871 - 15812799
Alignment:
Q  125 aataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtg 197  Q
    |||||||| |||||||||||||| | ||||||||||||||  ||||| |||| ||||| |||||| |||||||    
T  15812871 aataatttgagaaaatcacataactcagtgtaattatatgccggtgtcgtgttggtgtcggacacgacacgtg 15812799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 2731819 - 2731881
Alignment:
Q  123 ttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgtt 183  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||   ||||||||||||||||    
T  2731819 ttaatactttaagaaaatcacataattaagtgtaattatatgtgtatgtgttgtgtcggtgtt 2731881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 11665952 - 11666034
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgtttgata 204  Q
    ||||||||| | ||||||||| |||||||||||||||||||||  ||||| |||| | |||| ||||| |||||||| |||||    
T  11665952 taataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctgata 11666034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 4201397 - 4201443
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||    
T  4201397 acaccgttaataatttgaaaaaatcacataattaagtgtaattatat 4201443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 7928450 - 7928500
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| | |||||||||||||| ||||||||||||||||    
T  7928450 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtg 7928500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 8039893 - 8039820
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggaca 188  Q
    |||||| ||||||||| ||||||| | |||||| ||||||||||||||||  ||||| |||||||||| |||||    
T  8039893 acaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 8039820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 222
Target Start/End: Complemental strand, 34307840 - 34307737
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgtttgataatgatgcacg 214  Q
    |||||||| ||||||||| ||||||||||||| || ||||||||||||     |||| |||||||||| |||||| |||||| || |||| |||  ||||    
T  34307840 tgacaccgctaataatttgagaaaatcacatatttcagtgtaattata----agtgtcgtgtcggtgtcggacacgacacgtcttcgatactgagacacg 34307745  T
Q  215 tctaatcc 222  Q
     |||||||    
T  34307744 cctaatcc 34307737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 4987342 - 4987266
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| ||||  ||||||||||||||||| ||||||||    
T  4987342 taataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgt 4987266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 14209121 - 14209197
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||||| |||||||||||||| |||||||||| |  |||  |||| |||||||||| |||||| ||||||||    
T  14209121 taataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgt 14209197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 14840349 - 14840304
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||||    
T  14840349 acaccattaataatttcagaaaatcacataattcagtgtaattata 14840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 15796353 - 15796269
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||| ||||||||||| | ||||||| |||||| |||||||||| |  ||| ||||| |||| ||||| |||||||||||||||    
T  15796353 gacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgt 15796269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 27277889 - 27277852
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattat 161  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  27277889 taataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 10268545 - 10268501
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||| ||||||||||| | |||||||||||||||||||||||||    
T  10268545 gacacagttaataatttgaaaaaatcacataatttagtgtaatta 10268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 7614474 - 7614427
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    ||||| ||||||||||| |||||||||||||||| ||| |||||||||    
T  7614474 gacacagttaataatttaagaaaatcacataattcagtataattatat 7614427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 8842330 - 8842376
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    ||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  8842330 gacaccgctaataatttt-gaaaatcacataatttggtgtaattatat 8842376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 10690321 - 10690274
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    ||||||| ||||||| | |||||||||||||||| |||||||||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaattatat 10690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 11251986 - 11252033
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtgggtgt 171  Q
    ||||||||| |||||||||||||||| ||||||||||| ||| |||||    
T  11251986 taataatttgagaaaatcacataattcagtgtaattatgtgtcggtgt 11252033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 166
Target Start/End: Complemental strand, 15314924 - 15314885
Alignment:
Q  127 taattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  15314924 taatttgaaaaaatcacataatttagtgtaattatatgtg 15314885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 38731221 - 38731268
Alignment:
Q  119 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||| ||||||||||| |||||||||||||| |||||| |||||||||    
T  38731221 accgctaataattttaaaaaatcacataattcagtgtagttatatgtg 38731268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 2620104 - 2620034
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacac 194  Q
    |||| |||| |||||||||||||||| ||||||| ||| ||| ||||| ||| ||||||| ||||| ||||    
T  2620104 taatcatttgagaaaatcacataattaagtgtaactatgtgttggtgtcgtggcggtgttagacacgacac 2620034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 8383257 - 8383303
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  8383257 gacaccgctaataatttgagaaaatcatataattcagtgtaattata 8383303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 25093502 - 25093552
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||| |||||| |||| ||||||||||| |||| ||||||||||||||||    
T  25093502 gacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtg 25093552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 159
Target Start/End: Original strand, 28098143 - 28098181
Alignment:
Q  121 cgttaataattttagaaaatcacataatttagtgtaatt 159  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  28098143 cgttgataattttagaaaatcacataatttagggtaatt 28098181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 48202320 - 48202278
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||    
T  48202320 taatagtttgagaaaatcacataatttaatgtaattatatgtg 48202278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 1509538 - 1509583
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaatta 160  Q
    |||||| | ||||||||| | |||||||||||||||||||||||||    
T  1509538 tgacacagctaataatttgaaaaaatcacataatttagtgtaatta 1509583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 9624640 - 9624689
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatg 164  Q
    |||||| | ||||||||| |||||||||||||||| | ||||||||||||    
T  9624640 tgacactgctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 11658820 - 11658865
Alignment:
Q  121 cgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||| |||||||| ||||||| ||||| ||||||||||    
T  11658820 cgttaataatttgagaaaatcgcataattcagtgtgattatatgtg 11658865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 12704015 - 12704056
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgt 165  Q
    ||||||||| |||||| ||||||||| |||||||||||||||    
T  12704015 taataatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 17005670 - 17005594
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||| | ||||||| |||||| ||||||||||||  ||| |||||||||| |||||  |||| |||||||||    
T  17005670 taataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgt 17005594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 8789599 - 8789559
Alignment:
Q  126 ataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||||||||||  |||||||||||||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtg 8789559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 11493412 - 11493372
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatg 164  Q
    ||||||| | |||||||||||||||| ||||||||||||||    
T  11493412 taataatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 26508083 - 26508154
Alignment:
Q  88 cggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||| | ||||||||||||| | | ||||| | ||||||||| | |||||||||||||| ||||||||||    
T  26508083 cggacacgatacagatactgacacgct-gacacagctaataatttgaaaaaatcacataattcagtgtaatta 26508154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 35222952 - 35222988
Alignment:
Q  130 ttttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||||||||||| | ||||||||||||||    
T  35222952 ttttagaaaatcacataattcaatgtaattatatgtg 35222988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 55401083 - 55401119
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||| | |||||||||||||||||||||||||    
T  55401083 taataatttgaaaaaatcacataatttagtgtaatta 55401119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 194
Target Start/End: Original strand, 15902795 - 15902902
Alignment:
Q  88 cggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttgg 185  Q
    ||||||| ||||||| |||||||||   ||||||  ||||||||| | |||||||||||||||||||||||||||||||  |||||||||||||| | ||    
T  15902795 cggacacgacacagacactgacatgcc-gacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcgg 15902893  T
Q  186 acacaacac 194  Q
    |||| ||||    
T  15902894 acacgacac 15902902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 29787428 - 29787356
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggaca 188  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||| ||| |||||  |||||||||||||||    
T  29787428 gacaccgctaataatttgagaaaatcacataattcagtgtaattatgtgttggtgtaatgtcggtgttggaca 29787356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 32308120 - 32308200
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacac 194  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||| ||||||   |||| ||||||||||||||||| ||||    
T  32308120 gacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacac 32308200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 27093472 - 27093424
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 164  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27093472 gacaccgctaataatttaagaaaatcacataatttagtgtaattatatg 27093424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 27184829 - 27184877
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 164  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27184829 gacaccgctaataatttaagaaaatcacataatttagtgtaattatatg 27184877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 8160415 - 8160466
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  8160415 tgacaccgctaataatttaagaaaattacataatttagtgtaattatatgtg 8160466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 11700802 - 11700877
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacaca 190  Q
    |||||||||||||||||| | |||||||||||||| | ||||||||| |||  ||||||| ||||||| |||||||    
T  11700802 tgacaccgttaataatttgacaaaatcacataattcaatgtaattatgtgtctgtgttgtctcggtgtcggacaca 11700877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 17851434 - 17851481
Alignment:
Q  119 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  17851434 accgctaataattttagaaaatcacataattcagtgtaattatatgtg 17851481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 1433454 - 1433504
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  1433454 gacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtg 1433504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 2948683 - 2948733
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||    
T  2948683 gacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtg 2948733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 5233635 - 5233692
Alignment:
Q  122 gttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtc 177  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||  |||||||||||    
T  5233635 gttaataatttgagaaaatcacataatctagtgtaattatatgtgttggtgttgtgtc 5233692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 5235953 - 5236033
Alignment:
Q  82 ggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    |||||| |||||| ||||||| ||||||| ||  ||||||| ||||||||| ||||||| | ||||||||||||||||||||    
T  5235953 ggacattggacacgacacagacactgacacgtc-gacaccgctaataatttaagaaaattatataatttagtgtaattatat 5236033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 18213078 - 18213042
Alignment:
Q  130 ttttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||||||||||||||||||||||||||||    
T  18213078 ttttagaaaatcacataatttagtgtaattatatgtg 18213042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 27732300 - 27732248
Alignment:
Q  114 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| |||||||||||| ||||||| |||||||| ||||||||||||||||    
T  27732300 ttgacaacgttaataatttaagaaaattacataattcagtgtaattatatgtg 27732248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 3721101 - 3721143
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| |||||||||||||||||||| ||||||||||||    
T  3721101 taataatttgagaaaatcacataatttagtataattatatgtg 3721143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 7328742 - 7328700
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  7328742 taataatttgagaaaataacataatttagtgtaattatatgtg 7328700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 16341504 - 16341546
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtg 16341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 20549791 - 20549841
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| |||||||||| ||||| ||||||||||||||||    
T  20549791 gacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtg 20549841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 22602769 - 22602719
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||| ||| |||| |||||||||||||||| ||||||||||||||||    
T  22602769 gacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtg 22602719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 33384641 - 33384591
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||||||||| | ||||||||  |||||||||||||||||||||||    
T  33384641 gacaccgttaataatctgagaaaatcctataatttagtgtaattatatgtg 33384591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 49088810 - 49088892
Alignment:
Q  116 gacaccgttaataattttagaaaatcac--ataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgttt 200  Q
    ||||||||||||||||| | ||||||||  |||||||||| ||||||||||||    | |||| ||||||| |||||||||||||||    
T  49088810 gacaccgttaataatttaaaaaaatcacgtataatttagtataattatatgtg----tcgtgttggtgttgaacacaacacgtgttt 49088892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 2425818 - 2425742
Alignment:
Q  89 ggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| ||||||||||||||| |   | ||||||||||||||| |||||||||||||||| |||| || ||||||||    
T  2425818 ggacacgacacagatactgacacgccgg-caccgttaataatttgagaaaatcacataattaagtggaactatatgtg 2425742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 26329441 - 26329357
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    |||| |||||||||||| |||||| |||| |||| ||||||||||||||||  || || ||||||||||  ||||| ||||||||    
T  26329441 gacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacgacacgtgt 26329357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 6630963 - 6630888
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtg 197  Q
    ||||||||| ||||| |||| ||||| ||||||||||||||||  | ||| |||| ||||| ||||||||||||||    
T  6630963 taataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtg 6630888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 42720951 - 42720899
Alignment:
Q  114 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| ||||||||| | |||||||||||||| | ||||||||||||||    
T  42720951 ttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtg 42720899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 24339650 - 24339724
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgt 196  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| ||||| |||||||||| |||||| ||||||    
T  24339650 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgt 24339724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 38143230 - 38143273
Alignment:
Q  123 ttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||| | |||||||||||||||| ||||||||||||||    
T  38143230 ttaataatttgaaaaaatcacataatttaatgtaattatatgtg 38143273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 5548676 - 5548726
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| | ||||||| ||||||||| |||||| ||||||||||||||||    
T  5548676 gacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtg 5548726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 12278843 - 12278885
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||    
T  12278843 taataatttaagaaaatgacataattcagtgtaattatatgtg 12278885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 19206050 - 19206100
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| |||||||||||||||| | | ||||||||||||    
T  19206050 gacaccgctaataatttgagaaaatcacataattcattataattatatgtg 19206100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 22484025 - 22484075
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| |||||||||||||||||  ||||||| ||| ||||||||||||    
T  22484025 gacaccgctaataattttagaaaattgcataattcagtataattatatgtg 22484075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 22868050 - 22868092
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| | |||||||||||||||| ||||||||||||||||    
T  22868050 taataatatgagaaaatcacataattcagtgtaattatatgtg 22868092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 24146824 - 24146866
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||||||||||||||||| | | ||||||||||||    
T  24146824 taataattttagaaaatcacataattcaatataattatatgtg 24146866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 30731037 - 30731103
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgt 182  Q
    |||||||  |||||||| |||||||||||||||| ||||||||| | ||| ||||| |||| |||||    
T  30731037 gacaccgcgaataatttgagaaaatcacataattcagtgtaattgtgtgtcggtgtcgtgttggtgt 30731103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 2424622 - 2424659
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattat 161  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  2424622 taataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 9408386 - 9408349
Alignment:
Q  123 ttaataattttagaaaatcacataatttagtgtaatta 160  Q
    |||||||||| | |||||||||||||||||||||||||    
T  9408386 ttaataatttgaaaaaatcacataatttagtgtaatta 9408349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 23191896 - 23191945
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 165  Q
    ||||||| ||||||||| ||||||||||||| || |||||||||| ||||    
T  23191896 gacaccgctaataatttgagaaaatcacatatttcagtgtaattacatgt 23191945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 35493423 - 35493460
Alignment:
Q  126 ataattttagaaaatcacataatttagtgtaattatat 163  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  35493423 ataatttgagaaaatcacataatttagggtaattatat 35493460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 39138458 - 39138491
Alignment:
Q  130 ttttagaaaatcacataatttagtgtaattatat 163  Q
    |||||||||||||||||||| |||||||||||||    
T  39138458 ttttagaaaatcacataattcagtgtaattatat 39138491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 9482944 - 9482984
Alignment:
Q  126 ataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||||| |||| ||||||||||||||||    
T  9482944 ataatttgagaaaatcacacaattcagtgtaattatatgtg 9482984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 10377507 - 10377555
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 164  Q
    ||||| ||||||||| | ||||||||| |||||| ||||||||||||||    
T  10377507 gacactgttaataatataagaaaatcatataattcagtgtaattatatg 10377555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 41020516 - 41020544
Alignment:
Q  136 aaaatcacataatttagtgtaattatatg 164  Q
    |||||||||||||||||||||||||||||    
T  41020516 aaaatcacataatttagtgtaattatatg 41020544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 25038149 - 25038046
Alignment:
Q  96 acacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatt--atatgtgggtgttgtgtcggtgttggacacaaca 193  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||||||  | |||| ||| |||||| |||||  ||||| |||    
T  25038149 acacagatactgacacgtt-gacaccgttaataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgtgttggtgtccgacacgaca 25038051  T
Q  194 cgtgt 198  Q
    |||||    
T  25038050 cgtgt 25038046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 5732569 - 5732519
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  5732569 gacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtg 5732519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 16766648 - 16766781
Alignment:
Q  66 gcatgtatacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattata--t 163  Q
    ||||| ||||||||| ||||| ||||||| |||  || ||||||| |   ||||| | ||||||||| | |||||||||||||| |||||||||| |  |    
T  16766648 gcatggatacggacacggacaccggacacgacatggacactgacacgcc-gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagt 16766746  T
Q  164 gtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    || ||||| |||||||||| |||||||||||||||    
T  16766747 gtcggtgtcgtgtcggtgtcggacacaacacgtgt 16766781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 7086803 - 7086845
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  7086803 taataatttgagaaaatcacataatttagtgtaattatatgtg 7086845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 19040352 - 19040402
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  19040352 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 19040402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 25096378 - 25096467
Alignment:
Q  70 gtatacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||||| |||||||||| |||||||||| || |||| |   ||||||  ||||||||| ||||||||||||||| |||||||||||    
T  25096378 gtatacggacacggacatcggatacaacacagacaccgacacgac-gacaccactaataatttgagaaaatcacataatctagtgtaatta 25096467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 31579283 - 31579229
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgt 171  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| ||| |||||    
T  31579283 acaccgttaataatttgagaaaatcacataattcagtgtaattatgtgtcggtgt 31579229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 5970167 - 5970087
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaatt--atatgtgggtgttgtgtcggtgttggacacaacac 194  Q
    ||||| ||||||||||| | |||||||||||||| |||||||||  | |||||||||| |||||||||| |||||| ||||    
T  5970167 gacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacac 5970087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 7265651 - 7265602
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  7265651 acaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 7265602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 8805623 - 8805570
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtc 177  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  8805623 taataatttgagaaaatcacataatttagtgtaattatgtgtcggtgtagtgtc 8805570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 5462685 - 5462733
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||    
T  5462685 tgacaccgttaataatttgagaaaatcacataattcattgtaattatat 5462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 9658879 - 9658926
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||    
T  9658879 gacaccgctaataatttaagaaaatcacataattcagtgtaattatat 9658926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 16488635 - 16488565
Alignment:
Q  130 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||||||||| |||  ||||||||||||||||  ||||| |||||||||| |||||| ||||||||    
T  16488635 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 16488565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 32511726 - 32511679
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  32511726 tgacaccgctaataatttaagaaaatcacataattcagtgtaattata 32511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 9025545 - 9025503
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtg 9025503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 9195805 - 9195763
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  9195805 taataatttgagaaaatgacataatttagtgtaattatatgtg 9195763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 10842532 - 10842582
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| | ||||||||||||||||||||||| |||||||    
T  10842532 gacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtg 10842582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 10889033 - 10888983
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| | |||||||||||||||||||| ||||||||||    
T  10889033 gacaccgctaataatttgataaaatcacataatttagtgtgattatatgtg 10888983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 17302355 - 17302397
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| ||||||||||||||||| |||||||||||||||    
T  17302355 taataatttaagaaaatcacataattttgtgtaattatatgtg 17302397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 17341723 - 17341677
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||    
T  17341723 gacaccgttaataatttgataaaatcacataattcagtgtaattata 17341677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 7248366 - 7248442
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||| | || ||||||||||||| || |||||||||||||  || || ||||||||||||||||||||| ||||    
T  7248366 taataatctgaggaaatcacataattcagggtaattatatgtgttggagtcgtgtcggtgttggacacaacatgtgt 7248442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 30866202 - 30866153
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtg 30866153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 32298665 - 32298616
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| ||||||||| |||  ||||||||||||||||||||||||||||    
T  32298665 acaccgctaataatttaagatcatcacataatttagtgtaattatatgtg 32298616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 4118386 - 4118304
Alignment:
Q  122 gttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgtttga 202  Q
    ||||||||||| | |||||||||||||| | |||||||| |  ||| ||| ||||||| |||| |||||||| ||||||||||    
T  4118386 gttaataatttgaaaaaatcacataattaaatgtaattacaagtgttggttttgtgtcagtgtcggacacaatacgtgtttga 4118304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 9617437 - 9617484
Alignment:
Q  119 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  9617437 accggtaataatttgagaaaatcacataattcaatgtaattatatgtg 9617484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 166
Target Start/End: Original strand, 13851696 - 13851786
Alignment:
Q  75 cggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| |||||| | |||| |||| || ||||||| ||  ||||||| ||||||||| ||||||| || ||||| ||||||||||||||||    
T  13851696 cggacacggacattgaacacgacacggacactgacacgtc-gacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtg 13851786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 1532241 - 1532291
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 167  Q
    |||||| ||||||||| | ||||| |||||||| |||||||||||||||||    
T  1532241 acaccgctaataatttgataaaattacataattcagtgtaattatatgtgg 1532291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 7151420 - 7151462
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| | |||||||||||||| ||||||||||||||||    
T  7151420 taataatttgaaaaaatcacataattaagtgtaattatatgtg 7151462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 7377979 - 7378029
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||| ||||| |||||||||||||||| | ||||||||||||||    
T  7377979 gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtg 7378029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 8713979 - 8714060
Alignment:
Q  116 gacaccgttaataattttagaaaa-tcacataatttagtgtaatt--atatgtgggtgttgtgtcggtgttggacacaacac 194  Q
    ||||| ||||||||||| | |||| |||||||||| |||||||||  | |||||||||| |||||||||| |||||| ||||    
T  8713979 gacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacac 8714060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 9027178 - 9027228
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| ||| ||||||||||||  |||||||||||||||    
T  9027178 gacaccgctaataatttgagataatcacataattccgtgtaattatatgtg 9027228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 9629383 - 9629433
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||  |||||||| |||||||||||||||| | ||||||||||||||    
T  9629383 gacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtg 9629433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 11591917 - 11591879
Alignment:
Q  128 aattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtg 11591879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 165
Target Start/End: Complemental strand, 13360420 - 13360382
Alignment:
Q  127 taattttagaaaatcacataatttagtgtaattatatgt 165  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattatatgt 13360382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 238
Target Start/End: Original strand, 17435207 - 17435324
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgtttgataatgatgcacgtctaatc 221  Q
    ||||||||||| ||||| |||||||| |||||||||| |  |||  ||||| ||||| ||| |||||| ||||||||| || | ||   |||||||||||    
T  17435207 taataattttaaaaaattacataattcagtgtaattacaagtgttagtgttttgtcgatgtcggacacgacacgtgttcgacactgggacacgtctaatc 17435306  T
Q  222 cgaaaagtg-ccgtactt 238  Q
     |||||||| ||||||||    
T  17435307 tgaaaagtgtccgtactt 17435324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 24832596 - 24832638
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| ||||||||  |||||||||||||||||||||||    
T  24832596 taataatttgagaaaatcttataatttagtgtaattatatgtg 24832638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 26178732 - 26178690
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| | ||||||||||||||||||||||| |||||||    
T  26178732 taataatttgataaaatcacataatttagtgtaatcatatgtg 26178690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 26562701 - 26562739
Alignment:
Q  128 aattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtg 26562739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 32248979 - 32248937
Alignment:
Q  121 cgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||    
T  32248979 cgttgataattttaaaaaatcacataatttagggtaattatat 32248937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 32320729 - 32320679
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 165  Q
    |||||||||||||||||| | |||||||||||||| | ||| |||||||||    
T  32320729 tgacaccgttaataatttgataaaatcacataattcaatgtcattatatgt 32320679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 34447416 - 34447374
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaatt 159  Q
    |||||||||||||||| | ||||||| ||||||||||||||||    
T  34447416 acaccgttaataatttgataaaatcatataatttagtgtaatt 34447374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 7625084 - 7625168
Alignment:
Q  77 gacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    |||| ||||||||||||| ||||||| || |||| | | ||||| | ||||||||| ||||||| | |||||||||| ||||||||    
T  7625084 gacacggacatcggacacgacacagacaccgacacg-tcgacacggataataatttgagaaaatgatataatttagtataattata 7625168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 9522899 - 9522959
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgt 182  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| ||||||||||||||||    
T  9522899 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgt 9522959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 198
Target Start/End: Original strand, 10294064 - 10294191
Alignment:
Q  72 atacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggt 169  Q
    ||||||||| | ||| ||||||| |||| ||||||||||||   || |||| ||||||||| ||| |||| |||| || | ||||||||||||||  |||    
T  10294064 atacggacacgaacaccggacacgacacggatactgacatg-ccgataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggt 10294162  T
Q  170 gttgtgtcggtgttggacacaacacgtgt 198  Q
    || |||| ||||| |||||| ||| ||||    
T  10294163 gtcgtgttggtgtcggacacgacatgtgt 10294191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 24833284 - 24833243
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgt 165  Q
    |||||| || |||||||| |||||||||||||||||||||||    
T  24833284 taataagttaagaaaatcgcataatttagtgtaattatatgt 24833243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 34073398 - 34073338
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatat--gtgggtgttgtgtcggtgt 182  Q
    ||||||||| |||||||| ||||||| |||||||||||||  || ||||| ||||||||||    
T  34073398 taataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcggtgt 34073338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 677837 - 677885
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 164  Q
    ||||| ||||||||||| ||||||||| ||||| ||||||| |||||||    
T  677837 gacactgttaataatttgagaaaatcatataatatagtgtatttatatg 677885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 7996429 - 7996389
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatg 164  Q
    ||||||||| ||||||||| |||||| ||||||||||||||    
T  7996429 taataatttgagaaaatcatataattcagtgtaattatatg 7996389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 8022372 - 8022412
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatg 164  Q
    ||||||||| ||||||||| |||||| ||||||||||||||    
T  8022372 taataatttgagaaaatcatataattcagtgtaattatatg 8022412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 14721239 - 14721291
Alignment:
Q  114 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||| |||||||||| ||||||| |||||||| | | ||||||||||||    
T  14721239 ttgacaccattaataatttaagaaaattacataattcactataattatatgtg 14721291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 17327696 - 17327664
Alignment:
Q  134 agaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||||||||||||||| ||||||||    
T  17327696 agaaaatcacataatttagtgtaactatatgtg 17327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 17841640 - 17841604
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||| | |||||||||||||||||||||||||    
T  17841640 taataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 21885790 - 21885842
Alignment:
Q  114 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| ||||||||| | ||||| |||||||||| | ||||||||||||    
T  21885790 ttgacaccgataataatttaaaaaaataacataatttaatctaattatatgtg 21885842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 12713378 - 12713302
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatg--tgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||| |||||||||||||||||||||||||||||||  | |||||| ||||||||| | |||||||||||||    
T  12713378 taataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12713302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 12717469 - 12717393
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatg--tgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||| |||||||||||||||||||||||||||||||  | |||||| ||||||||| | |||||||||||||    
T  12717469 taataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12717393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 39953205 - 39953155
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  39953205 gacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtg 39953155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 34257969 - 34257922
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  34257969 gacaccgttaataatttaataaaatcacataatttagtgtaattatat 34257922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 44482240 - 44482310
Alignment:
Q  126 ataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacac 194  Q
    ||||||| |||||||||||||||| ||||||||||||||||  ||||| |||||||||| |||||| ||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacac 44482310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 1864939 - 1864889
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  1864939 gacacagttaataatttgagaaaatcacataattcagtgtaattatatgtg 1864889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 9709777 - 9709870
Alignment:
Q  72 atacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||| |||||||||||| ||||| |||| || |||||||||  | |||||| ||||||||| ||||||||||||||||   ||||||||||||||    
T  9709777 atacagacatggacatcagacacgacacggacactgacatgcct-acaccgctaataatttgagaaaatcacataattcgttgtaattatatgtg 9709870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 166
Target Start/End: Complemental strand, 7918308 - 7918220
Alignment:
Q  77 gacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||| ||||||| ||||||| | ||||| | | |||| |  ||||||||| |||||||||||||||| ||||||||||||||||    
T  7918308 gacatggacaccggacacgacacagacaatgacacgct-gacatcactaataatttgagaaaatcacataattcagtgtaattatatgtg 7918220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 12707924 - 12707848
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatg--tgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||| ||||||||| ||||||||||| |||||||||  | |||||| ||||||||| | |||||||||||||    
T  12707924 taataatttaagaaaatcatataatttagtgcaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12707848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 14332693 - 14332652
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgt 165  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  14332693 taataatttgagaaaatcacataatttagtgtaattatatgt 14332652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 25272479 - 25272528
Alignment:
Q  113 tttgacaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  25272479 tttgacacagttaacaatttgagaaaatcacataatttagtgtaattata 25272528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 17754311 - 17754390
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg--gtgttgtgtcggtgttggacacaaca 193  Q
    ||||||| ||||||||| | ||||| |||||||| ||||||| ||||||||   |||| |||||||||||||||||||||    
T  17754311 gacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaaca 17754390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 39130819 - 39130776
Alignment:
Q  123 ttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  39130819 ttaataattttagaaaattatataatttagtgtaattatatgtg 39130776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 2784556 - 2784606
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||||| ||||| |||||||||||||||| ||| ||||||||||||    
T  2784556 gacaccgttaaaaatttaagaaaatcacataattgagtataattatatgtg 2784606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 13997883 - 13997933
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||| |||| | |||||||||||||| ||||||||||||||||    
T  13997883 gacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtg 13997933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 25098614 - 25098564
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| | ||||||| |||||||||||||||| ||||||||||||||||    
T  25098614 gacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtg 25098564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 25361896 - 25361961
Alignment:
Q  126 ataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacac 189  Q
    ||||||| |||||||||||||||| ||||||||||||||||   |||| |||||||||| ||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacac 25361961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 26238171 - 26238091
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||| |||||||   || |||||||||| |||||||||||||||    
T  26238171 gacaccgctaataatttgagaaaataacataattcagtgtaat-atatgtgtcagt-gtgtcggtgtcggacacaacacgtgt 26238091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 34371713 - 34371797
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    |||||||| ||||||||  |||||||||||||||| ||||||||||||||||  ||||| |||| ||||| ||| || ||||||||    
T  34371713 tgacaccgctaataattg-agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgacacgtgt 34371797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 34712434 - 34712392
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  34712434 taataatttgagaaaataacataatttagtgtaattatatgtg 34712392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 36878461 - 36878507
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  36878461 gacaccgctaataatttgagaaaatcacataattcagtgtaattata 36878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 6427351 - 6427400
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  6427351 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtg 6427400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 16164366 - 16164290
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||| | |||||||||||||||| ||||||||||||||    ||| |||| |||||||||| ||||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtcattgtcgtgttggtgttggacgcaacacgtgt 16164290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 40181879 - 40181920
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgt 165  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattatatgt 40181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 1486817 - 1486722
Alignment:
Q  66 gcatgtatacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||| ||||||||| ||| | |||| || |||| |||||||||| | | ||||| | ||||||||| | |||||||||||||| ||||||||||||    
T  1486817 gcatggatacggacacggataccggatacgacacggatactgacacgct-gacacagctaataatttgaaaaaatcacataattcagtgtaattata 1486722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 19324572 - 19324612
Alignment:
Q  126 ataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 30749854 - 30749890
Alignment:
Q  130 ttttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30749854 ttttagaaaatcacataattcagtgtaattatatgtg 30749890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 30771305 - 30771341
Alignment:
Q  130 ttttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30771305 ttttagaaaatcacataattcagtgtaattatatgtg 30771341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 41877529 - 41877485
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||    
T  41877529 gacaccgctaataatttgagaaaattacataatttagtgtaatta 41877485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 42004998 - 42004937
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacac 189  Q
    ||||||||| ||||||| ||||||||||||||||| |||    |||||||||||||||| ||||||    
T  42004998 taataatttgagaaaatgacataatttagtgtaatcata----ggtgttgtgtcggtgtcggacac 42004937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 48148112 - 48148049
Alignment:
Q  100 agatactgacatgtttgacaccgttaataattttagaaaa-tcacataatttagtgtaattatat 163  Q
    ||||||||||||||| ||||||| ||||||||||| |||| ||| |||||| |||||||||||||    
T  48148112 agatactgacatgtt-gacaccgctaataattttaaaaaaatcatataattcagtgtaattatat 48148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 15323124 - 15323206
Alignment:
Q  76 ggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatt 159  Q
    ||||| ||||| ||||||| |||  || ||||||||||  || || ||||||||||| | ||||||||||||||||||||||||    
T  15323124 ggacacggacaccggacacgacatggacactgacatgtc-gatacagttaataatttgaaaaaatcacataatttagtgtaatt 15323206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 36905998 - 36906072
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacac 189  Q
    |||||| ||||||| | |||||||||||||||| || |||||||||||||  || |||||||| |||| ||||||    
T  36905998 acaccgctaataatctgagaaaatcacataattcagagtaattatatgtgttggcgttgtgtcagtgtcggacac 36906072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 52903252 - 52903299
Alignment:
Q  119 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||||| | ||||||| |||||| ||||||||||||||||    
T  52903252 accgttaataatttaataaaatcatataattcagtgtaattatatgtg 52903299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 398824 - 398778
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||||| ||||||||| | |||||||||||||| ||||||||||||    
T  398824 gacaccgctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 2896213 - 2896140
Alignment:
Q  82 ggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgta 156  Q
    ||||| |||||||||||| || ||||||| |   ||||||| ||||||||| |||||||||||||||| ||||||    
T  2896213 ggacaacggacacaacacggacactgacacgcc-gacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 10233261 - 10233303
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| || |||||||||||||||| ||||||||||||||||    
T  10233261 taataaattgagaaaatcacataattcagtgtaattatatgtg 10233303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 12443511 - 12443469
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||    
T  12443511 taataatttgagaaaatcacataattcagtgtaattgtatgtg 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 13436466 - 13436508
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  13436466 taataatttaaggaaatcacataattcagtgtaattatatgtg 13436508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 17425152 - 17425102
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| | |||||||||||||| | ||||||||||||||    
T  17425152 gacaccgataataatttgataaaatcacataattcaatgtaattatatgtg 17425102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 17831590 - 17831540
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| |||||||||||| ||| |||||||| |||||||    
T  17831590 gacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtg 17831540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 20157409 - 20157359
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||| | |||||||||||||||| |||||||| |||||||    
T  20157409 gacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtg 20157359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 21530689 - 21530735
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||||||||||||||| ||||||||| ||||||| || ||||||||    
T  21530689 gacaccgttaataatttgagaaaatcatataatttggtataattata 21530735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 28674801 - 28674847
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    |||||||||||||||| ||||||| |||||||| ||| |||||||||    
T  28674801 acaccgttaataatttgagaaaattacataattcagtataattatat 28674847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 32724157 - 32724107
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||| |||||||||||| ||||| | |||||||||| ||||||||||||||    
T  32724157 gacatcgttaataatttgagaaatttacataatttaatgtaattatatgtg 32724107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 34298444 - 34298482
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  34298444 taataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 35999373 - 35999331
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||    
T  35999373 taataatttaagaaaatcatataatttagtataattatatgtg 35999331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 38503320 - 38503370
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| ||||||||| ||| || ||||||||||||||||    
T  38503320 gacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtg 38503370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 9828052 - 9828128
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||| | |||||||||||||| ||||||||| ||||||  ||||| ||||| ||||  ||||| ||||||||    
T  9828052 taataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgt 9828128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 10572640 - 10572580
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgt 182  Q
    ||||||||| ||||||||||||||||  ||||||||| |||||  |||||||||| |||||    
T  10572640 taataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttgtgttggtgt 10572580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 20132024 - 20131987
Alignment:
Q  126 ataattttagaaaatcacataatttagtgtaattatat 163  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  20132024 ataatttgagaaaatcacataatttagggtaattatat 20131987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 32461514 - 32461439
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||| | |||||||||||||||| |||||||| |  ||| |||| ||||||||||| |||||| ||||||||    
T  32461514 taataatttgaaaaaatcacataatttaatgtaattacaagtgttggtg-tgtgtcggtgtcggacacgacacgtgt 32461439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 45534235 - 45534202
Alignment:
Q  130 ttttagaaaatcacataatttagtgtaattatat 163  Q
    |||||||||||||||||||||||||||| |||||    
T  45534235 ttttagaaaatcacataatttagtgtaagtatat 45534202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 47989505 - 47989577
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacac 194  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| ||||| |||||||||| |||||| ||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacac 47989577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 5898325 - 5898277
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 164  Q
    ||||||| ||||||| | | |||||||||||||| ||||||||||||||    
T  5898325 gacaccgctaataatctgaaaaaatcacataattcagtgtaattatatg 5898277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 16297385 - 16297298
Alignment:
Q  72 atacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||||||||||||||||| | || |||||||||| | | ||||| |  |||||| | | ||||||||| |||| ||||||||||    
T  16297385 atacggacatggacatcggacacgatacggatactgacacg-tcgacacagcaaataatatgaaaaaatcacaaaattcagtgtaatta 16297298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 18190208 - 18190164
Alignment:
Q  66 gcatgtatacggacatggacatcggacacaacacagatactgaca 110  Q
    ||||| ||||||||||||||| ||||||| |||| ||||||||||    
T  18190208 gcatggatacggacatggacaccggacacgacacggatactgaca 18190164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 22515938 - 22515902
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||| | |||||||||||||||||||||||||    
T  22515938 taataatttgaaaaaatcacataatttagtgtaatta 22515902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 22881667 - 22881631
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||| | |||||||||||||||||||||||||    
T  22881667 taataatttgaaaaaatcacataatttagtgtaatta 22881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 25934633 - 25934700
Alignment:
Q  133 tagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    |||||||||||| |||  ||||||||||||||||  ||| | |||||||||| |||||| ||||||||    
T  25934633 tagaaaatcacaaaatacagtgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgt 25934700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 29229460 - 29229512
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagt-gtaattatatgtg 166  Q
    |||||| | ||||||||| |||||||||||| ||||||| |||||||||||||    
T  29229460 tgacactgctaataatttgagaaaatcacatgatttagtggtaattatatgtg 29229512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 31015051 - 31015087
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  31015051 taataatttgagaaaatcacataattcagtgtaatta 31015087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 37055907 - 37055871
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  37055907 taataatttgagaaaattacataatttagtgtaatta 37055871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 22440659 - 22440609
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  22440659 gacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 903924 - 903971
Alignment:
Q  118 caccgttaataattttagaaaatcacataatttagtgtaattatatgt 165  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  903924 caccgttaataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 21539953 - 21539879
Alignment:
Q  88 cggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    ||||||||||| ||| |||||||||   |||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  21539953 cggacacaacatagacactgacatgcc-gacaccattaataatttaagaaaatcatataatttagtgtaattatat 21539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 5775417 - 5775367
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  5775417 gacaccattaataatttgagaaaatcacataattaagtgtaattatatgtg 5775367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 13134460 - 13134500
Alignment:
Q  126 ataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  13134460 ataatttaagaaaatcacataatttagtgtaattatatgtg 13134500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 8423777 - 8423731
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  8423777 gacaccgctaataatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 11931280 - 11931330
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||||||||| | | |||||||||||||||||||||| ||||||||    
T  11931280 gacaccgttaataatatgaaaaaatcacataatttagtgtaaatatatgtg 11931330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 36635332 - 36635374
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  36635332 taataatttgagaaaatcacataattcagtgtaattatatgtg 36635374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 40613450 - 40613500
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||| ||| |||||||||||||||| ||||||||||||||||    
T  40613450 gacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtg 40613500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 40742591 - 40742641
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| |||||||||| ||||||||| ||||| |||||||||||||||||    
T  40742591 gacaccattaataatttgagaaaatcatataatctagtgtaattatatgtg 40742641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 7214573 - 7214533
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatg 164  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  7214573 taataatttgagaaaatcacataatttaatgtaattatatg 7214533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 10499311 - 10499279
Alignment:
Q  134 agaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||||||||||||||||||||||||    
T  10499311 agaaaatcacataatttagtgtaattatatgtg 10499279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 166
Target Start/End: Original strand, 17876166 - 17876205
Alignment:
Q  127 taattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  17876166 taattttagaaaatgacataatttagtgtaatcatatgtg 17876205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 30982935 - 30982853
Alignment:
Q  118 caccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||| |||| |||| ||||||||||||| || ||||||||||||  ||| ||||| ||||||||||  ||||| ||||||||    
T  30982935 caccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgt 30982853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 38148784 - 38148702
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaa--ttatatgtgggtgttgtgtcggtgttggacacaacacgt 196  Q
    ||||||| ||||| ||| |||||||||||||||| |||||||  ||| |||| | ||| |||| |||||||||||| ||||||    
T  38148784 gacaccgctaatagtttgagaaaatcacataattcagtgtaattttaaatgtcgatgtcgtgttggtgttggacacgacacgt 38148702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 46084036 - 46083966
Alignment:
Q  130 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    |||||| |||||||||||| |||||||||||||||||  ||||| ||||| || | |||||| ||||||||    
T  46084036 ttttagtaaatcacataatctagtgtaattatatgtgtcggtgtcgtgtcagtatcggacacgacacgtgt 46083966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 999399 - 999357
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| || |||||| |||||||||||||||||||||||    
T  999399 taataatttgagtaaatcatataatttagtgtaattatatgtg 999357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 3731208 - 3731250
Alignment:
Q  121 cgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  3731208 cgttgataatttgagaaaatcacataatttagggtaattatat 3731250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 158
Target Start/End: Original strand, 17446079 - 17446113
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaat 158  Q
    ||||||||| |||||||||||||||||||||||||    
T  17446079 taataatttaagaaaatcacataatttagtgtaat 17446113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 19500897 - 19500836
Alignment:
Q  136 aaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacg 195  Q
    |||| |||||| |||||||||||||||||||  ||||| |||||||||| |||||| |||||    
T  19500897 aaaaacacatattttagtgtaattatatgtgatggtgtcgtgtcggtgtcggacacgacacg 19500836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 33950144 - 33950186
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| |||||||||||||||||| |||||| |||||||    
T  33950144 taataatttgagaaaatcacataatttaatgtaatcatatgtg 33950186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 40179697 - 40179647
Alignment:
Q  114 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatg 164  Q
    |||||||| |||||| ||| | |||||||||||||| ||||||||||||||    
T  40179697 ttgacaccattaatagtttgaaaaaatcacataattcagtgtaattatatg 40179647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 48139264 - 48139314
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  48139264 gacactgttaataatttgagataatctcataatttaatgtaattatatgtg 48139314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 49653023 - 49652969
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcg 178  Q
    ||||||||| ||||||||| |||||| ||| ||||||||||| ||||| ||||||    
T  49653023 taataatttaagaaaatcagataattcagtataattatatgttggtgtcgtgtcg 49652969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 2234231 - 2234295
Alignment:
Q  96 acacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattat 161  Q
    ||||||||||||||| | | | ||||||| ||||||| |||||||||||||||| | |||||||||    
T  2234231 acacagatactgacacgct-gtcaccgttgataatttgagaaaatcacataattcaatgtaattat 2234295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 6485663 - 6485626
Alignment:
Q  123 ttaataattttagaaaatcacataatttagtgtaatta 160  Q
    |||||||||| | |||||||||||||||||||||||||    
T  6485663 ttaataatttgaaaaaatcacataatttagtgtaatta 6485626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 16189710 - 16189759
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| ||| ||||| |||||||||||||||| ||||||||||| ||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtg 16189759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 17344513 - 17344550
Alignment:
Q  129 attttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  17344513 atttaagaaaatcacataatttaatgtaattatatgtg 17344550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 22234929 - 22234865
Alignment:
Q  136 aaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    |||||||||||||| ||||||||| ||||||  ||||| ||||||||||  ||||| ||||||||    
T  22234929 aaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgt 22234865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 27706229 - 27706192
Alignment:
Q  123 ttaataattttagaaaatcacataatttagtgtaatta 160  Q
    |||||||||| | |||||||||||||||||||||||||    
T  27706229 ttaataatttaaaaaaatcacataatttagtgtaatta 27706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 44081631 - 44081586
Alignment:
Q  121 cgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||| | ||||||| |||||||| ||||||||||||||    
T  44081631 cgttaataatttgaaaaaatcatataatttaatgtaattatatgtg 44081586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 7012066 - 7012141
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacac 189  Q
    ||||||| ||||||||| ||||||| |||||||| ||||| || ||| ||   |||||||||||||||| ||||||    
T  7012066 gacaccgataataatttgagaaaatgacataattcagtgtgatcataggtatcggtgttgtgtcggtgtcggacac 7012141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 9996849 - 9996889
Alignment:
Q  125 aataattttagaaaatcacataatttagtgtaattatatgt 165  Q
    |||||||| |||||||||||||||| ||| |||||||||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgt 9996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 18576086 - 18576046
Alignment:
Q  126 ataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||||||||||  |||||||||||||||    
T  18576086 ataatttgagaaaatcacataattcggtgtaattatatgtg 18576046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 3966503 - 3966587
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||||||  ||||| ||||| |||| |||||||||| ||||    
T  3966503 gacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgt 3966587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 18592073 - 18592157
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||| ||||| ||| ||||||| |||||||| | ||||||||||||||  ||||| |||||||||| |||||||||||||||    
T  18592073 gacaccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgt 18592157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 27144463 - 27144513
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||||||||    
T  27144463 gacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtg 27144513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 11685939 - 11686022
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||| ||||||||| ||||| || ||||||||||||||||||||||||  ||||| || ||||||| |||||| ||||||||    
T  11685939 gacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacgacacgtgt 11686022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 36838544 - 36838593
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtg 36838593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 24273090 - 24273038
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 167  Q
    |||||| |||| |||||| |||||||||||||||| |||||||||||||||||    
T  24273090 tgacacagttattaatttgagaaaatcacataattcagtgtaattatatgtgg 24273038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 24389124 - 24389176
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 167  Q
    |||||| |||| |||||| |||||||||||||||| |||||||||||||||||    
T  24389124 tgacacagttattaatttgagaaaatcacataattcagtgtaattatatgtgg 24389176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 35017045 - 35017085
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatg 164  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  35017045 taataatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 6471949 - 6471898
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| | ||||||||| |||||||||||||||| ||||||||||||||||    
T  6471949 tgacacggctaataatttgagaaaatcacataattcagtgtaattatatgtg 6471898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 21814275 - 21814345
Alignment:
Q  130 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||||||||| |||  ||||||||||||||||  ||||| |||||||||| |||||| ||||||||    
T  21814275 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21814345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 7175078 - 7175028
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||||||||||| ||||||||||||||||| |  ||||||||||||    
T  7175078 gacaccgttaataatttgagaaaatcacataatttggcataattatatgtg 7175028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 16203846 - 16203804
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  16203846 taataatttgagaaaatctcataatttagtgtaattatatgtg 16203804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 23220940 - 23221033
Alignment:
Q  72 atacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||| |||||||| ||||||||  ||| | || |||||||||  ||||||| ||||||||| | |||||||||||||||||||| || |||||||    
T  23220940 atactgacatggatatcggacatgacatatatgctgacatgtc-gacaccgctaataatttgataaaatcacataatttagtgttatcatatgtg 23221033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 28588733 - 28588687
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  28588733 gacaccggtaataatttgagaaaatcacataattcagtgtaattata 28588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 2577239 - 2577190
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 165  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||| ||||||    
T  2577239 gacaccgataataatttgagaaaatgacataatttagtgtaatcatatgt 2577190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 21522758 - 21522834
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||||| ||||| |||||||| |||||||||| |  ||| ||||| |||||||||| |||||| ||||||||    
T  21522758 taataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21522834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 21533324 - 21533400
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||||| ||||| |||||||| |||||||||| |  ||| ||||| |||||||||| |||||| ||||||||    
T  21533324 taataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21533400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 30502446 - 30502397
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| ||||||||| |||||||||| ||||| ||||||||||||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtg 30502397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 30542789 - 30542740
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||| ||||||||| |||||||||| ||||| ||||||||||||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtg 30542740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 14873527 - 14873567
Alignment:
Q  126 ataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtg 14873567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 39758286 - 39758322
Alignment:
Q  130 ttttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||||||||||||||||||| ||||||||||||||||    
T  39758286 ttttagaaaatcacataattcagtgtaattatatgtg 39758322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 6401512 - 6401582
Alignment:
Q  130 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||||||||| |||  ||||||||||||||||  ||||| ||||| |||| |||||| ||||||||    
T  6401512 ttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgt 6401582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 12927662 - 12927701
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatat 163  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  12927662 taataatttgagaaaatcatataatttagtgtaattatat 12927701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 23016049 - 23016002
Alignment:
Q  115 tgacaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||| ||||||| |||| |||||||||||||||| ||||||||||||    
T  23016049 tgacatcgttaatcatttgagaaaatcacataattcagtgtaattata 23016002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 30098329 - 30098372
Alignment:
Q  119 accgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    |||||||||||||| |||||||||||||||| | ||||||||||    
T  30098329 accgttaataatttgagaaaatcacataattcaatgtaattata 30098372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 23012459 - 23012417
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||    
T  23012459 taataatttgagaaaatcatataatttaatgtaattatatgtg 23012417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 28262450 - 28262408
Alignment:
Q  121 cgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  28262450 cgttgataatttgagaaaatcacataatttagggtaattatat 28262408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 38749622 - 38749557
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcgg 179  Q
    ||||||| ||||||||| | ||||| |||||||| | ||||||||||||||  |||||||||||||    
T  38749622 gacaccgataataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgttgtgtcgg 38749557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 41091308 - 41091266
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    |||| |||| |||||||||||||||| ||||||||||||||||    
T  41091308 taatgatttgagaaaatcacataattcagtgtaattatatgtg 41091266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 17593783 - 17593734
Alignment:
Q  114 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    |||| |||| ||||||||| |||||||||| ||||| |||||||||||||    
T  17593783 ttgaaaccgctaataatttgagaaaatcacgtaattcagtgtaattatat 17593734  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 14674277 - 14674313
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||| | |||||||||||||||||||||||||    
T  14674277 taataatttgaaaaaatcacataatttagtgtaatta 14674313  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 18421890 - 18421850
Alignment:
Q  126 ataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| |||||||||||||||  ||||||||||||||||    
T  18421890 ataatttgagaaaatcacataatccagtgtaattatatgtg 18421850  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 19429438 - 19429482
Alignment:
Q  122 gttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||||| |||||||||||||| ||||||||| ||| ||||    
T  19429438 gttaataatttgagaaaatcacataacttagtgtaaatatctgtg 19429482  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 19579709 - 19579745
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  19579709 taataatttgagaaaatcacataatttagtgcaatta 19579745  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 21191158 - 21191071
Alignment:
Q  72 atacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 160  Q
    |||||||||  |||| ||||||| |||| || |||||||||   ||||| | ||||||||| | |||||||||||||| ||||||||||    
T  21191158 atacggacactgacaccggacacgacacggacactgacatgcc-gacacagctaataatttgaaaaaatcacataattcagtgtaatta 21191071  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 33178033 - 33178069
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||| | |||||||||||||||||||||||||    
T  33178033 taataatttaaaaaaatcacataatttagtgtaatta 33178069  T

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Target: scaffold1528 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 1035 - 1114
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg--gtgttgtgtcggtgttggacacaaca 193  Q
    ||||||| ||||||||| | ||||| |||||||| ||||||| ||||||||   |||| |||||||||||||||||||||    
T  1035 gacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaaca 1114  T

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Target: scaffold0236 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 25829 - 25781
Alignment:
Q  114 ttgacaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  25829 ttgacacggttaataattagagaaaatcacataatttagtgtaattata 25781  T

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Target: scaffold0110 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 28850 - 28913
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtc 177  Q
    ||||||||||||||||| |||||||| ||||||| | ||||||||||||||  |||||||||||    
T  28850 gacaccgttaataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgttgtgtc 28913  T

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Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 99893 - 99943
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||| ||||||||||||||||| |||||||| | ||||||||||||||    
T  99893 gacaccgataataattttagaaaataacataattcaatgtaattatatgtg 99943  T

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Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 90844 - 90890
Alignment:
Q  117 acaccgttaataattttagaaaatcacataatttagtgtaattatat 163  Q
    ||||| |||||||||| ||||||||| |||||| |||||||||||||    
T  90844 acaccattaataatttgagaaaatcatataattcagtgtaattatat 90890  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 53189 - 53264
Alignment:
Q  125 aataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    |||||||| |||||||||||||||| ||||||||||||  ||| ||||  |||||||||| |||||  ||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgt 53264  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 160
Target Start/End: Original strand, 46639 - 46726
Alignment:
Q  72 atacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||| ||||||||||||| |||| || | ||||| |   ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  46639 atacggacacggacatcggacacgacacggacaatgacacgcc-gacacagttaataatttgaaaaaatcacataattcagtgtaatta 46726  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 68299 - 68255
Alignment:
Q  118 caccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||    
T  68299 caccgttaataatttgagaaaatcatataatttagtataattata 68255  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 263423 - 263341
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgtttgata 204  Q
    ||||||||| |||||| ||||||||| ||||||||||||  |||  |||| ||||||||||  ||||| ||||||||| ||||    
T  263423 taataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgttcgata 263341  T

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Target: scaffold0697 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 1644 - 1690
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaattata 162  Q
    ||||||||||||||||| ||||||||| ||||||| || ||||||||    
T  1644 gacaccgttaataatttgagaaaatcatataatttggtataattata 1690  T

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Target: scaffold0168 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 21000 - 21093
Alignment:
Q  72 atacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||| ||| ||||| | ||||| |||| || ||||||||| | ||||| ||||||||||| |||||||||||||| |  || ||||||||||||    
T  21000 atacgaacacggacaccagacacgacacggacactgacatgct-gacacggttaataatttgagaaaatcacataagtcggtataattatatgtg 21093  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 9798 - 9756
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||    
T  9798 taataatttgagaaaatcacttaattcagtgtaattatatgtg 9756  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 135363 - 135321
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaattatatgtg 166  Q
    ||||||||| ||||||||||||||||  |||||||||||||||    
T  135363 taataatttgagaaaatcacataattctgtgtaattatatgtg 135321  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 241614 - 241678
Alignment:
Q  136 aaaatcacataatttagtgtaattat--atgtgggtgttgtgtcggtgttggacacaacacgtgt 198  Q
    ||||||||||||||||||||||||||   ||| ||||| |||| ||||| |||||| ||||||||    
T  241614 aaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgt 241678  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 3908 - 3864
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  3908 gacacggttaataatttaaaaaaatcacataattcagtgtaatta 3864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 192308 - 192264
Alignment:
Q  116 gacaccgttaataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||||||||||| ||||||| ||||||||  |||||||||    
T  192308 gacaccgttaataatttgagaaaattacataattcggtgtaatta 192264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 17800 - 17764
Alignment:
Q  124 taataattttagaaaatcacataatttagtgtaatta 160  Q
    ||||||||| | |||||||||||||||||||||||||    
T  17800 taataatttgaaaaaatcacataatttagtgtaatta 17764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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