View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0942_high_6 (Length: 606)

Name: NF0942_high_6
Description: NF0942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0942_high_6
NF0942_high_6
[»] chr1 (2 HSPs)
chr1 (30-595)||(36979516-36980075)
chr1 (312-377)||(28108178-28108244)
[»] chr7 (3 HSPs)
chr7 (284-378)||(2729785-2729879)
chr7 (299-349)||(5897602-5897652)
chr7 (320-374)||(28443765-28443819)
[»] chr3 (3 HSPs)
chr3 (288-348)||(39028189-39028249)
chr3 (322-360)||(51381055-51381093)
chr3 (284-360)||(54525003-54525079)
[»] chr6 (4 HSPs)
chr6 (288-377)||(33900099-33900188)
chr6 (288-363)||(27177029-27177104)
chr6 (288-360)||(10498119-10498191)
chr6 (320-376)||(33629460-33629516)
[»] chr2 (8 HSPs)
chr2 (300-377)||(29699507-29699584)
chr2 (284-378)||(27249739-27249833)
chr2 (320-366)||(5357560-5357606)
chr2 (313-374)||(3848151-3848212)
chr2 (284-349)||(29923870-29923935)
chr2 (284-360)||(11915387-11915463)
chr2 (322-378)||(25271846-25271902)
chr2 (284-343)||(12037358-12037417)
[»] chr8 (4 HSPs)
chr8 (284-348)||(31645172-31645236)
chr8 (320-378)||(5920766-5920824)
chr8 (284-360)||(42456844-42456920)
chr8 (320-360)||(41581146-41581186)
[»] chr4 (5 HSPs)
chr4 (284-347)||(45073262-45073325)
chr4 (284-377)||(9672177-9672270)
chr4 (288-377)||(21512084-21512173)
chr4 (284-378)||(24699347-24699441)
chr4 (324-377)||(12868532-12868585)
[»] chr5 (1 HSPs)
chr5 (288-360)||(9379273-9379345)


Alignment Details
Target: chr1 (Bit Score: 511; Significance: 0; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 511; E-Value: 0
Query Start/End: Original strand, 30 - 595
Target Start/End: Complemental strand, 36980075 - 36979516
Alignment:
Q  30 gtaaggacttgtattatggttgatctttctatctggatcccactttgcatataaatgatgtaactatcatgttgtcgtaacttttttgtgtttgtaattg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||         
T  36980075 gtaaggacttgtattatggttgatctttctatctggatcccactttgcatataaatgatgtaactatcatgttgtcgtaacatttttgtgtttgt----- 36979981  T
Q  130 ttggctggtttatatgagtgaaacactttaatgtaaggatagagtttattttgacattgtaattgtttcataagtattctctcatttgtggataccatag 229  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36979980 -tggctggtttatatgagtgaaacactttaatgtaaggatagagtttattttgacattgtaattgtttcataagtattctctcatttgtggataccatag 36979882  T
Q  230 catgcttttatctttggattgaccatttcaaatttaaaagtgacatgcaattttatggattttaatcggcggcaattaattgccgatgatcatttacgtc 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  36979881 catgcttttatctttggattgaccatttcaaatttaaaagtgacatgcaattttatggattttaatcggcggcaattaattgccgattaacatttacgtc 36979782  T
Q  330 tttttctggtgtgtttcagctttgttagaagcgtgaataacaattttcacaggccttatcatcggaggctatgtttaaaattctcatatgggaccaatgt 429  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  36979781 tttttctggtgtgtttcagctttgttagaagcgtgaaaaacaattttcataggccttgtcatgggaggctatgtttaaaattcccatatgggaccaatgt 36979682  T
Q  430 agttgcaaatgatatgaacttgcccaaatgctttgctcctttgtcatgtgcaactgcctatatgtctttgtttgaactgctaaaagtaacattttctatc 529  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36979681 agttgcaaatgatatgaacttgcccaaatgctttgctcctttgtcatgtgcaactgcctatatgtctttgtttgaactgctaaaagtaacattttctatc 36979582  T
Q  530 aaagcttttccttttcctttttacatatttgataatcattctctttccttgtcttttggtatattg 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36979581 aaagcttttccttttcctttttacatatttgataatcattctctttccttgtcttttggtatattg 36979516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 312 - 377
Target Start/End: Original strand, 28108178 - 28108244
Alignment:
Q  312 ccgatgatcatttacgtc-tttttctggtgtgtttcagctttgttagaagcgtgaataacaattttc 377  Q
    ||||||| |||||||||| |||||||||| ||||||||| |||||||||| ||||| ||||||||||    
T  28108178 ccgatgaacatttacgtcttttttctggtttgtttcagccttgttagaagtgtgaacaacaattttc 28108244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 6e-20; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 284 - 378
Target Start/End: Complemental strand, 2729879 - 2729785
Alignment:
Q  284 atggattttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcagctttgttagaagcgtgaataacaattttca 378  Q
    |||||||||||  || |||| |||| ||||||||  |||||||||||||||||| ||||||||||| |||||||||| ||||||| |||||||||    
T  2729879 atggattttaactggtggcagttaactgccgatggacatttacgtctttttctgttgtgtttcagccttgttagaagtgtgaatatcaattttca 2729785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 5897652 - 5897602
Alignment:
Q  299 cggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcagc 349  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  5897652 cggcaattaattgctgatgtgcatttacgtctttttctggtgtgtttcagc 5897602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 374
Target Start/End: Original strand, 28443765 - 28443819
Alignment:
Q  320 catttacgtctttttctggtgtgtttcagctttgttagaagcgtgaataacaatt 374  Q
    ||||||||||||||||| |||||||||||| ||||| |||| ||||| |||||||    
T  28443765 catttacgtctttttctagtgtgtttcagccttgtttgaagtgtgaacaacaatt 28443819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 39028189 - 39028249
Alignment:
Q  288 attttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcag 348  Q
    ||||||| |||||||| |||| ||||||||| |||||||||||||||||||||||||||||    
T  39028189 attttaaccggcggcagttaactgccgatgaacatttacgtctttttctggtgtgtttcag 39028249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 360
Target Start/End: Original strand, 51381055 - 51381093
Alignment:
Q  322 tttacgtctttttctggtgtgtttcagctttgttagaag 360  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  51381055 tttacgtctttttctggtgtgtttcagccttgtttgaag 51381093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 284 - 360
Target Start/End: Original strand, 54525003 - 54525079
Alignment:
Q  284 atggattttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcagctttgttagaag 360  Q
    ||||| ||||| |||||||| |||| |||| ||   ||||||||  |||||||||||||||||||| || |||||||    
T  54525003 atggaatttaaccggcggcagttaactgccaatagacatttacgattttttctggtgtgtttcagccttcttagaag 54525079  T

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Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 377
Target Start/End: Complemental strand, 33900188 - 33900099
Alignment:
Q  288 attttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcagctttgttagaagcgtgaataacaattttc 377  Q
    ||||||| |||||||| |||| | || |||| ||||||||||||||||||||||||||| || ||||| |||| || || ||||||||||    
T  33900188 attttaaccggcggcagttaactaccaatgagcatttacgtctttttctggtgtgtttcggcattgtttgaagtgtaaacaacaattttc 33900099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 363
Target Start/End: Original strand, 27177029 - 27177104
Alignment:
Q  288 attttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcagctttgttagaagcgt 363  Q
    |||||||||||||||| |||| || |||||| |||||||||||||||||  |||||||||   |||||||||||||    
T  27177029 attttaatcggcggcagttaactgtcgatgaacatttacgtctttttctaatgtgtttcaatcttgttagaagcgt 27177104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 360
Target Start/End: Complemental strand, 10498191 - 10498119
Alignment:
Q  288 attttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcagctttgttagaag 360  Q
    ||||||| ||| |||| |||| || |||||| |||||||||||||||||| ||||||||| |||| |||||||    
T  10498191 attttaaacggtggcagttaactgtcgatgaacatttacgtctttttctgatgtgtttcaactttattagaag 10498119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 376
Target Start/End: Original strand, 33629460 - 33629516
Alignment:
Q  320 catttacgtctttttctggtgtgtttcagctttgttagaagcgtgaataacaatttt 376  Q
    |||||||||||||||||| ||||||||||| |||||| ||| | ||| |||||||||    
T  33629460 catttacgtctttttctgatgtgtttcagccttgttaaaagtgcgaacaacaatttt 33629516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 377
Target Start/End: Complemental strand, 29699584 - 29699507
Alignment:
Q  300 ggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcagctttgttagaagcgtgaataacaattttc 377  Q
    |||| |||| ||||||||  |||||||||||||||||||||||||||||| |||||||||   |||||| ||||||||    
T  29699584 ggcagttaactgccgatggacatttacgtctttttctggtgtgtttcagccttgttagaaatatgaataccaattttc 29699507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 284 - 378
Target Start/End: Complemental strand, 27249833 - 27249739
Alignment:
Q  284 atggattttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcagctttgttagaagcgtgaataacaattttca 378  Q
    |||||||||||  ||||||| |||| ||||||||  ||||||| |||||||| ||||||||||||| ||||| |||| ||  | |||||||||||    
T  27249833 atggattttaacaggcggcagttaactgccgatggacatttacatctttttccggtgtgtttcagccttgtttgaagtgtatacaacaattttca 27249739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 366
Target Start/End: Complemental strand, 5357606 - 5357560
Alignment:
Q  320 catttacgtctttttctggtgtgtttcagctttgttagaagcgtgaa 366  Q
    ||||||||||||||||| |||||||||||| |||||||||| |||||    
T  5357606 catttacgtctttttctagtgtgtttcagccttgttagaagtgtgaa 5357560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 3848151 - 3848212
Alignment:
Q  313 cgatgatcatttacgtctttttctggtgtgtttcagctttgttagaagcgtgaataacaatt 374  Q
    |||||| |||||| ||||||||||| ||||||||||||||  || ||| |||||||||||||    
T  3848151 cgatgaacatttatgtctttttctgatgtgtttcagctttcataaaagtgtgaataacaatt 3848212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 29923935 - 29923870
Alignment:
Q  284 atggattttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcagc 349  Q
    ||||||||||| |||||||| |||| || |||| | |||||| ||||||||||| |||||||||||    
T  29923935 atggattttaaccggcggcagttaactgtcgataaacatttatgtctttttctgttgtgtttcagc 29923870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 360
Target Start/End: Complemental strand, 11915463 - 11915387
Alignment:
Q  284 atggattttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcagctttgttagaag 360  Q
    ||||||||||| |||| | | |||| || |||||| ||||||| | |||||||||||||||||||  ||||||||||    
T  11915463 atggattttaaccggcagtagttaactgtcgatgaacatttacatttttttctggtgtgtttcagtcttgttagaag 11915387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 378
Target Start/End: Original strand, 25271846 - 25271902
Alignment:
Q  322 tttacgtctttttctggtgtgtttcagctttgttagaagcgtgaataacaattttca 378  Q
    |||||||||||||||| ||||||||||| ||||| |||| || || |||||||||||    
T  25271846 tttacgtctttttctgatgtgtttcagccttgtttgaagtgtaaacaacaattttca 25271902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 12037358 - 12037417
Alignment:
Q  284 atggattttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgt 343  Q
    ||||||||||| || ||| | |||| |||| |||| ||||||||||||||||||||||||    
T  12037358 atggattttaaccgacggtagttaactgccaatgaacatttacgtctttttctggtgtgt 12037417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 31645172 - 31645236
Alignment:
Q  284 atggattttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcag 348  Q
    ||||||||||| || ||||| |||| |||||||| |||||||| || ||||||||||||||||||    
T  31645172 atggattttaaccgacggcagttaactgccgatggtcatttacttcattttctggtgtgtttcag 31645236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 378
Target Start/End: Complemental strand, 5920824 - 5920766
Alignment:
Q  320 catttacgtctttttctggtgtgtttcagctttgttagaagcgtgaataacaattttca 378  Q
    ||||||||| |||||||| ||||||| ||| |||||||||| ||||| |||||||||||    
T  5920824 catttacgtatttttctgctgtgttttagccttgttagaagtgtgaacaacaattttca 5920766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 360
Target Start/End: Complemental strand, 42456920 - 42456844
Alignment:
Q  284 atggattttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcagctttgttagaag 360  Q
    ||||||||||| || ||| | ||||||| |||||  || ||||||||||||||| ||| ||||||| ||||||||||    
T  42456920 atggattttaaccgacggtagttaattgtcgatggacaattacgtctttttctgatgtatttcagccttgttagaag 42456844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 41581146 - 41581186
Alignment:
Q  320 catttacgtctttttctggtgtgtttcagctttgttagaag 360  Q
    ||||||||||||||||| |||||||||||| ||||| ||||    
T  41581146 catttacgtctttttctagtgtgtttcagccttgtttgaag 41581186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000006; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 45073262 - 45073325
Alignment:
Q  284 atggattttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttca 347  Q
    ||||||||||| |||||||| |||| ||||||||  ||||||| ||||||||| ||||||||||    
T  45073262 atggattttaaccggcggcagttaactgccgatggacatttacatctttttctagtgtgtttca 45073325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 377
Target Start/End: Original strand, 9672177 - 9672270
Alignment:
Q  284 atggattttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcagctttgttagaagcgtgaataacaattttc 377  Q
    ||||||||||| || || || |||| | ||||||  ||||| |||||||||||| ||||||||||| |||||||||  ||||| | ||||||||    
T  9672177 atggattttaaccgacgacagttaactaccgatgggcattttcgtctttttctgatgtgtttcagcattgttagaactgtgaacatcaattttc 9672270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 288 - 377
Target Start/End: Original strand, 21512084 - 21512173
Alignment:
Q  288 attttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcagctttgttagaagcgtgaataacaattttc 377  Q
    ||||||| |||| ||| |||| ||| ||||  |||||||||||||||||||||||||||| | |||||  ||| || || ||||||||||    
T  21512084 attttaaccggctgcagttaactgctgatggacatttacgtctttttctggtgtgtttcatccttgtttaaagtgtcaacaacaattttc 21512173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 378
Target Start/End: Complemental strand, 24699441 - 24699347
Alignment:
Q  284 atggattttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcagctttgttagaagcgtgaataacaattttca 378  Q
    |||||||||||  ||||||| |||| || |||||  |||||||||||||||||||| ||||| |||  |||| |||  || || |||||||||||    
T  24699441 atggattttaactggcggcagttaactggcgatggacatttacgtctttttctggtatgttttagccctgtttgaattgtaaacaacaattttca 24699347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 12868532 - 12868585
Alignment:
Q  324 tacgtctttttctggtgtgtttcagctttgttagaagcgtgaataacaattttc 377  Q
    ||||| |||| ||||||||||| ||||||||||||||  |||| ||||||||||    
T  12868532 tacgtgttttactggtgtgttttagctttgttagaagtatgaacaacaattttc 12868585  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 360
Target Start/End: Original strand, 9379273 - 9379345
Alignment:
Q  288 attttaatcggcggcaattaattgccgatgatcatttacgtctttttctggtgtgtttcagctttgttagaag 360  Q
    ||||||| |||||||| ||||||  ||||||  ||||| ||||||||||||||| ||||||| || |||||||    
T  9379273 attttaaccggcggcagttaattatcgatgagaatttatgtctttttctggtgtatttcagccttcttagaag 9379345  T

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