View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0942_low_122 (Length: 266)

Name: NF0942_low_122
Description: NF0942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0942_low_122
NF0942_low_122
[»] chr4 (46 HSPs)
chr4 (38-165)||(38844277-38844404)
chr4 (31-84)||(38766075-38766128)
chr4 (30-91)||(31307167-31307228)
chr4 (223-266)||(53583155-53583198)
chr4 (30-91)||(14854584-14854645)
chr4 (30-91)||(35972322-35972383)
chr4 (223-264)||(38844517-38844558)
chr4 (223-266)||(149314-149357)
chr4 (223-266)||(25139982-25140025)
chr4 (223-266)||(25725721-25725764)
chr4 (223-266)||(31147232-31147275)
chr4 (223-266)||(45277108-45277151)
chr4 (223-266)||(46794528-46794571)
chr4 (30-91)||(13686580-13686641)
chr4 (34-91)||(45994501-45994558)
chr4 (42-91)||(51853677-51853726)
chr4 (230-266)||(39684637-39684673)
chr4 (226-266)||(40755922-40755962)
chr4 (223-266)||(1562563-1562606)
chr4 (223-266)||(3968886-3968929)
chr4 (223-266)||(4489825-4489868)
chr4 (223-266)||(4896527-4896570)
chr4 (223-266)||(10096769-10096812)
chr4 (38-81)||(10199213-10199256)
chr4 (223-266)||(11064116-11064159)
chr4 (223-266)||(12074178-12074221)
chr4 (223-266)||(25523225-25523268)
chr4 (223-266)||(34116567-34116610)
chr4 (223-266)||(38133981-38134024)
chr4 (223-266)||(42516651-42516694)
chr4 (223-266)||(44165910-44165953)
chr4 (223-266)||(46911899-46911942)
chr4 (223-266)||(46912826-46912869)
chr4 (223-266)||(51389101-51389144)
chr4 (223-266)||(51397898-51397941)
chr4 (223-266)||(55595950-55595993)
chr4 (223-266)||(55996423-55996466)
chr4 (223-266)||(56379393-56379436)
chr4 (30-75)||(35334199-35334244)
chr4 (223-264)||(35580129-35580170)
chr4 (223-264)||(43759178-43759219)
chr4 (223-264)||(46364006-46364047)
chr4 (223-264)||(48743713-48743754)
chr4 (230-266)||(26440677-26440713)
chr4 (226-266)||(35332707-35332747)
chr4 (31-91)||(45695910-45695970)
[»] chr2 (38 HSPs)
chr2 (30-84)||(5394383-5394437)
chr2 (30-84)||(18105463-18105517)
chr2 (30-91)||(12133331-12133392)
chr2 (38-91)||(28365928-28365981)
chr2 (35-91)||(17981477-17981533)
chr2 (223-266)||(1889148-1889191)
chr2 (223-266)||(32688571-32688614)
chr2 (223-266)||(34249581-34249624)
chr2 (30-91)||(37568828-37568889)
chr2 (30-91)||(42745217-42745278)
chr2 (30-91)||(44732674-44732735)
chr2 (226-266)||(23880096-23880136)
chr2 (223-266)||(6365187-6365230)
chr2 (30-89)||(7157479-7157538)
chr2 (223-266)||(32749999-32750042)
chr2 (229-266)||(9979097-9979134)
chr2 (223-264)||(35965578-35965619)
chr2 (223-266)||(4738599-4738642)
chr2 (223-266)||(7086151-7086194)
chr2 (223-266)||(11980652-11980695)
chr2 (223-266)||(13104480-13104523)
chr2 (223-266)||(13466102-13466145)
chr2 (223-266)||(14797677-14797720)
chr2 (223-266)||(15283277-15283320)
chr2 (223-266)||(31635837-31635880)
chr2 (223-266)||(33296098-33296141)
chr2 (223-266)||(34442114-34442157)
chr2 (223-266)||(36132975-36133018)
chr2 (30-84)||(993740-993794)
chr2 (228-266)||(5167774-5167812)
chr2 (226-264)||(12065920-12065958)
chr2 (36-89)||(3772650-3772703)
chr2 (229-266)||(14871641-14871678)
chr2 (229-266)||(14876707-14876744)
chr2 (223-264)||(43665625-43665666)
chr2 (234-266)||(15901952-15901984)
chr2 (42-82)||(37348572-37348612)
chr2 (230-266)||(41040267-41040303)
[»] chr3 (45 HSPs)
chr3 (30-91)||(30996066-30996127)
chr3 (30-89)||(46604661-46604720)
chr3 (30-92)||(48204412-48204474)
chr3 (30-91)||(25224678-25224739)
chr3 (223-266)||(8066356-8066399)
chr3 (223-266)||(36442217-36442260)
chr3 (223-266)||(37303101-37303144)
chr3 (223-266)||(51410807-51410850)
chr3 (223-264)||(39540238-39540279)
chr3 (223-266)||(108432-108475)
chr3 (223-266)||(5398919-5398962)
chr3 (223-266)||(22813073-22813116)
chr3 (223-266)||(26279885-26279928)
chr3 (223-266)||(37215258-37215301)
chr3 (223-266)||(37303384-37303427)
chr3 (41-91)||(14352533-14352583)
chr3 (35-89)||(38331109-38331163)
chr3 (38-87)||(28967291-28967340)
chr3 (229-266)||(31326711-31326748)
chr3 (223-264)||(48649583-48649624)
chr3 (223-263)||(28269810-28269850)
chr3 (39-91)||(38088614-38088666)
chr3 (223-266)||(11335329-11335372)
chr3 (223-266)||(12792639-12792682)
chr3 (223-266)||(18169158-18169201)
chr3 (223-266)||(20215949-20215992)
chr3 (30-89)||(22288216-22288275)
chr3 (223-266)||(43176203-43176246)
chr3 (223-266)||(43900784-43900827)
chr3 (223-266)||(44334828-44334871)
chr3 (223-266)||(46003706-46003749)
chr3 (223-266)||(51032651-51032694)
chr3 (223-266)||(51464299-51464342)
chr3 (30-91)||(27763702-27763761)
chr3 (226-264)||(30251010-30251048)
chr3 (223-264)||(33007363-33007404)
chr3 (229-266)||(34607953-34607990)
chr3 (223-264)||(34733318-34733359)
chr3 (223-264)||(41369600-41369641)
chr3 (229-266)||(49761219-49761256)
chr3 (230-266)||(9719475-9719511)
chr3 (228-260)||(32536747-32536779)
chr3 (226-266)||(34271520-34271560)
chr3 (226-266)||(46315985-46316025)
chr3 (228-264)||(50745372-50745408)
[»] chr8 (36 HSPs)
chr8 (223-266)||(9738720-9738763)
chr8 (30-91)||(30935983-30936044)
chr8 (223-266)||(10553110-10553153)
chr8 (30-75)||(2743928-2743973)
chr8 (30-91)||(4125125-4125186)
chr8 (35-92)||(39086796-39086853)
chr8 (31-91)||(12958187-12958247)
chr8 (223-266)||(3988906-3988949)
chr8 (223-266)||(22767133-22767176)
chr8 (223-266)||(31806300-31806343)
chr8 (223-266)||(34996387-34996430)
chr8 (223-266)||(40102024-40102067)
chr8 (223-266)||(42716321-42716364)
chr8 (228-266)||(295546-295584)
chr8 (30-72)||(13468846-13468888)
chr8 (30-84)||(19715827-19715881)
chr8 (223-266)||(8074751-8074794)
chr8 (223-266)||(8841031-8841074)
chr8 (223-266)||(12959939-12959982)
chr8 (223-266)||(20473780-20473823)
chr8 (223-266)||(21418619-21418662)
chr8 (223-266)||(35633996-35634039)
chr8 (223-266)||(35818938-35818981)
chr8 (223-266)||(40608514-40608557)
chr8 (223-266)||(41305009-41305052)
chr8 (223-266)||(43873718-43873761)
chr8 (223-266)||(45101397-45101440)
chr8 (229-266)||(11584097-11584134)
chr8 (30-71)||(15682928-15682969)
chr8 (223-264)||(27836183-27836224)
chr8 (42-91)||(34378245-34378294)
chr8 (30-91)||(36994601-36994662)
chr8 (229-266)||(42786693-42786730)
chr8 (223-263)||(3756905-3756945)
chr8 (226-266)||(34494668-34494708)
chr8 (226-266)||(37033131-37033171)
[»] chr7 (27 HSPs)
chr7 (32-91)||(21747142-21747201)
chr7 (30-91)||(8839382-8839443)
chr7 (30-91)||(13254202-13254263)
chr7 (30-91)||(29059784-29059845)
chr7 (30-89)||(2657937-2657996)
chr7 (42-91)||(5905801-5905850)
chr7 (30-91)||(28537369-28537430)
chr7 (30-75)||(31492098-31492143)
chr7 (31-91)||(19477351-19477411)
chr7 (223-266)||(2790178-2790221)
chr7 (223-266)||(21752659-21752702)
chr7 (223-266)||(28824504-28824547)
chr7 (223-266)||(33212043-33212086)
chr7 (223-266)||(33684681-33684724)
chr7 (223-266)||(40212516-40212559)
chr7 (223-266)||(41966333-41966376)
chr7 (41-91)||(32469909-32469959)
chr7 (230-266)||(43213320-43213356)
chr7 (223-266)||(2756956-2756999)
chr7 (223-266)||(9055268-9055311)
chr7 (223-266)||(31364911-31364954)
chr7 (229-266)||(30941179-30941216)
chr7 (35-84)||(40099378-40099427)
chr7 (223-264)||(47644708-47644749)
chr7 (39-91)||(21411734-21411786)
chr7 (226-266)||(31982058-31982098)
chr7 (226-266)||(42276092-42276132)
[»] chr6 (15 HSPs)
chr6 (30-89)||(15614674-15614733)
chr6 (223-266)||(8395343-8395386)
chr6 (223-266)||(3821379-3821422)
chr6 (30-81)||(12411137-12411188)
chr6 (223-266)||(29383558-29383601)
chr6 (30-91)||(21029084-21029145)
chr6 (30-91)||(21910184-21910245)
chr6 (223-266)||(11785356-11785399)
chr6 (223-266)||(27102116-27102159)
chr6 (223-266)||(27143938-27143981)
chr6 (223-266)||(30796102-30796145)
chr6 (223-266)||(32457279-32457322)
chr6 (223-265)||(29643444-29643486)
chr6 (225-266)||(16337099-16337140)
chr6 (223-264)||(31480861-31480902)
[»] chr1 (34 HSPs)
chr1 (223-266)||(28253016-28253059)
chr1 (223-266)||(31436821-31436864)
chr1 (223-266)||(36690599-36690642)
chr1 (223-266)||(36706700-36706743)
chr1 (223-266)||(52233248-52233291)
chr1 (31-91)||(16756061-16756121)
chr1 (223-266)||(1615037-1615080)
chr1 (223-266)||(11068426-11068469)
chr1 (32-91)||(14500361-14500420)
chr1 (223-266)||(30505363-30505406)
chr1 (223-266)||(39010815-39010858)
chr1 (223-266)||(44112455-44112498)
chr1 (223-266)||(44641930-44641973)
chr1 (30-84)||(45806222-45806276)
chr1 (46-91)||(28724652-28724697)
chr1 (31-91)||(17600600-17600660)
chr1 (223-266)||(3606121-3606164)
chr1 (223-266)||(8464540-8464583)
chr1 (223-266)||(18541078-18541121)
chr1 (223-266)||(27810274-27810317)
chr1 (223-266)||(30439251-30439294)
chr1 (223-266)||(31427984-31428027)
chr1 (223-266)||(39669807-39669850)
chr1 (223-266)||(45042262-45042305)
chr1 (223-266)||(45470867-45470910)
chr1 (223-266)||(49596236-49596279)
chr1 (223-266)||(50226906-50226949)
chr1 (30-89)||(52912602-52912661)
chr1 (30-91)||(25655365-25655426)
chr1 (229-266)||(32966268-32966305)
chr1 (238-266)||(25061756-25061784)
chr1 (223-259)||(37138557-37138593)
chr1 (234-266)||(38913599-38913631)
chr1 (226-266)||(45740574-45740614)
[»] chr5 (20 HSPs)
chr5 (30-91)||(10591906-10591967)
chr5 (223-266)||(20125390-20125433)
chr5 (223-266)||(27392729-27392772)
chr5 (223-266)||(36416089-36416132)
chr5 (223-266)||(42909720-42909763)
chr5 (30-91)||(28023544-28023605)
chr5 (226-266)||(19376162-19376202)
chr5 (223-266)||(8087800-8087843)
chr5 (223-266)||(12661974-12662017)
chr5 (223-266)||(32873176-32873219)
chr5 (223-266)||(33393635-33393678)
chr5 (223-266)||(33743360-33743403)
chr5 (223-266)||(34381013-34381056)
chr5 (223-266)||(38500944-38500987)
chr5 (223-266)||(39595273-39595316)
chr5 (39-81)||(22188106-22188148)
chr5 (223-264)||(3141498-3141539)
chr5 (30-75)||(30785087-30785132)
chr5 (230-266)||(30334789-30334825)
chr5 (137-165)||(42909864-42909892)
[»] scaffold0504 (1 HSPs)
scaffold0504 (223-266)||(10762-10805)
[»] scaffold0014 (1 HSPs)
scaffold0014 (223-266)||(199267-199310)
[»] scaffold0155 (1 HSPs)
scaffold0155 (234-266)||(3298-3330)
[»] scaffold0238 (1 HSPs)
scaffold0238 (223-266)||(16388-16431)
[»] scaffold0182 (1 HSPs)
scaffold0182 (30-69)||(26332-26371)
[»] scaffold0154 (1 HSPs)
scaffold0154 (223-266)||(9875-9918)
[»] scaffold0148 (1 HSPs)
scaffold0148 (223-266)||(9454-9497)
[»] scaffold0131 (1 HSPs)
scaffold0131 (223-266)||(15561-15604)
[»] scaffold0032 (1 HSPs)
scaffold0032 (223-266)||(17437-17480)
[»] scaffold0024 (1 HSPs)
scaffold0024 (223-266)||(91949-91992)
[»] scaffold0011 (1 HSPs)
scaffold0011 (223-266)||(219691-219734)
[»] scaffold0130 (1 HSPs)
scaffold0130 (229-266)||(25704-25741)
[»] scaffold0009 (1 HSPs)
scaffold0009 (223-264)||(263722-263763)
[»] scaffold0057 (1 HSPs)
scaffold0057 (226-266)||(38880-38920)


Alignment Details
Target: chr4 (Bit Score: 91; Significance: 4e-44; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 38 - 165
Target Start/End: Original strand, 38844277 - 38844404
Alignment:
38 gaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggtggagaatatgcagttttgaaaaggaatatatgtttatannnnnnnc 137  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||       |    
38844277 gaccttggttaagctagaagagactcgttccatctcatttaagcacttttgggtggagaatatgcagttttgaaaaggaatatatgttcatatttttttc 38844376  T
138 ttgagtagtgttatttgaacaaccatat 165  Q
    ||||||| ||||||||||||||||||||    
38844377 ttgagtaatgttatttgaacaaccatat 38844404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 38766128 - 38766075
Alignment:
31 aacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgct 84  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
38766128 aacccaggaccttggttaagctagaagagactcgttccatctcatctaagcgct 38766075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 31307167 - 31307228
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||| ||||||    
31307167 gaacccaggaccttggttaagctagaagagacccgttccatctcatctaagtgctcttgggt 31307228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 53583155 - 53583198
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
53583155 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 53583198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 14854645 - 14854584
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||||| |||||||||||| |||||||||  ||||||||||||| |||||||| ||||||    
14854645 gaacccagaaccttggttaagctagaagagaaccgttccatctcatctaagcgctcttgggt 14854584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 35972383 - 35972322
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||| ||||||||||||| |||||||| | ||||||||||||| |||||||| ||||||    
35972383 gaacccaagaccttggttaagctagaagaggcccgttccatctcatctaagcgctcttgggt 35972322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 38844517 - 38844558
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    |||||||||| |||||||||||||||||||||||||||||||    
38844517 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcattt 38844558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 149314 - 149357
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||    
149314 ttgtcaaaaaattgttagaaattggttgtacaaatatcatttct 149357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 25139982 - 25140025
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
25139982 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttct 25140025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 25725721 - 25725764
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
25725721 ttgtcaaaaagttgttagaaagtggttgtacaaatatcatttct 25725764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 31147275 - 31147232
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
31147275 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttct 31147232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 45277108 - 45277151
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||| ||||| |||||||||||||||||||||||||||||||||    
45277108 ttgtaaaaaagttgtgagaaagtggttgtacaaatatcatttct 45277151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 46794528 - 46794571
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
46794528 ttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttct 46794571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 13686641 - 13686580
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||||||||||||||||||  ||||||||| | | ||||||||| |||||||| ||||||    
13686641 gaacccaggaccttggttaagcaagaagagacccatgccatctcatctaagcgctcttgggt 13686580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 45994558 - 45994501
Alignment:
34 ccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||||||||||||| ||||||||||  |||||||||||| ||| |||| ||||||    
45994558 ccaggaccttggttaagctagaagagacctgttccatctcatctaaacgctcttgggt 45994501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 51853726 - 51853677
Alignment:
42 ttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||||||||||||||||||| ||| ||||||| |||||||| ||||||    
51853726 ttggttaagttagaagagactcattctatctcatctaagcgctcttgggt 51853677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 39684673 - 39684637
Alignment:
230 aaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||| ||||||||||||||||||||||||||||    
39684673 aaaattgtcagaaagtggttgtacaaatatcatttct 39684637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 40755962 - 40755922
Alignment:
226 tcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
40755962 tcaaaaaattgttagaaaatggttgtacaaatatcatttct 40755922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 1562563 - 1562606
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
1562563 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttct 1562606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 3968929 - 3968886
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
3968929 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttct 3968886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 4489825 - 4489868
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||    
4489825 ttgtcaaaaaattgttagaaaatggttatacaaatatcatttct 4489868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 4896527 - 4896570
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
4896527 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 4896570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 10096769 - 10096812
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
10096769 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatttct 10096812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 10199213 - 10199256
Alignment:
38 gaccttggttaagttagaagagactcgttccatctcatttaagc 81  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||    
10199213 gaccttggttaagttataagagacccgttccatctcatctaagc 10199256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 11064116 - 11064159
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
11064116 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 11064159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 12074178 - 12074221
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||    
12074178 ttgtcaaaaaattgtcataaaatggttgtacaaatatcatttct 12074221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 25523225 - 25523268
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||||||||| | ||||||||||||||||||||    
25523225 ttgtcaaaaagttgtgagaaaatagttgtacaaatatcatttct 25523268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 34116567 - 34116610
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
34116567 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 34116610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 38134024 - 38133981
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||    
38134024 ttgtcaaaaaattgtcacaaagtggttgtacaaatataatttct 38133981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 42516694 - 42516651
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
42516694 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatttct 42516651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 44165953 - 44165910
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||||||||   ||||||||||||||||||||||||||    
44165953 ttgtcaaaaaattgtcgcaaagtggttgtacaaatatcatttct 44165910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 46911942 - 46911899
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||    
46911942 ttgtcaaaaagttgtgagaaagtgattgtaaaaatatcatttct 46911899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 46912826 - 46912869
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||| |||||||||| | ||||||||||||||||||||||||||    
46912826 ttgttaaaaaattgtaataaagtggttgtacaaatatcatttct 46912869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 51389101 - 51389144
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
51389101 ttgtcaaaaagttgttacaaagtggttgtacaaatatcatttct 51389144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 51397898 - 51397941
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
51397898 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatttct 51397941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 55595993 - 55595950
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
55595993 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttct 55595950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 55996466 - 55996423
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| ||||| || |||||||||||||||||||    
55996466 ttgtcaaaaaattgttagaaaatgattgtacaaatatcatttct 55996423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 56379436 - 56379393
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||    
56379436 ttgtaaaaaagttgtgaggaagtggttgtacaaatatcatttct 56379393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 35334199 - 35334244
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcat 75  Q
    ||||| || |||||||||||| ||||||||||| ||||||||||||    
35334199 gaaccaagaaccttggttaagctagaagagacttgttccatctcat 35334244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 35580170 - 35580129
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||    
35580170 ttgtcaaaaaattgtcagaaaatggctgtacaaatatcattt 35580129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 43759178 - 43759219
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||    
43759178 ttgtcaaaaaattgttagaaaatggttgtacaaatattattt 43759219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 46364006 - 46364047
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    ||||||||||||||| ||||| |||||||||| |||||||||    
46364006 ttgtcaaaaaattgttagaaaatggttgtacagatatcattt 46364047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 48743754 - 48743713
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    ||||||||||||||| | ||| ||||||||||||||||||||    
48743754 ttgtcaaaaaattgttaaaaattggttgtacaaatatcattt 48743713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 26440713 - 26440677
Alignment:
230 aaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||| | ||||||||||||||||||||||||||    
26440713 aaaattgtcacaaagtggttgtacaaatatcatttct 26440677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 35332747 - 35332707
Alignment:
226 tcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| | | ||||||||||||||||||||||||||    
35332747 tcaaaaaattatcataaagtggttgtacaaatatcatttct 35332707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 45695910 - 45695970
Alignment:
31 aacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||||||||||||| ||  ||||| |||||||||| ||||||| |||||| | ||||||    
45695910 aacccaggaccttggtcaaactagaaaagactcgttctatctcatctaagcgttcttgggt 45695970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 5394437 - 5394383
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgct 84  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
5394437 gaacccaggaccttggttaagctagaagagactcgttccatctcatctaagcgct 5394383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 18105463 - 18105517
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgct 84  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
18105463 gaacccaggaccttggttaagctagaagagactcgttccatctcatataagcgct 18105517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 12133331 - 12133392
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||| ||||||| ||||| |||||||||||||||||||||||| |||||||| ||||||    
12133331 gaacccatgaccttgattaagctagaagagactcgttccatctcatctaagcgctcttgggt 12133392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 28365981 - 28365928
Alignment:
38 gaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
28365981 gaccttggttaagttagaagagacgcgttccatctcatctaagcgctcttgggt 28365928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 17981533 - 17981477
Alignment:
35 caggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||||||| ||||||    
17981533 caggactttggttaagctagaagagactcgttccatctcatctaagcgctattgggt 17981477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 1889191 - 1889148
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
1889191 ttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttct 1889148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 32688571 - 32688614
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
32688571 ttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttct 32688614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 34249624 - 34249581
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
34249624 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 34249581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 37568828 - 37568889
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||||||||||||||||| ||||||| || ||||||||||||| |||| ||| ||||||    
37568828 gaacccaggaccttggttaagctagaagaaacccgttccatctcatctaagtgctcttgggt 37568889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 42745217 - 42745278
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||| ||||||||||||| || ||||||| ||||||||||||| |||||||| ||||||    
42745217 gaacccaagaccttggttaagctataagagacccgttccatctcatctaagcgctcttgggt 42745278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 44732674 - 44732735
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||| |||| ||| ||||||    
44732674 gaacccaggaccttggttaagctataagagacccgttccatctcatctaagtgctcttgggt 44732735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 23880136 - 23880096
Alignment:
226 tcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||| |||||||||||||||||||||||||||||||||    
23880136 tcaaaaagttgtgagaaagtggttgtacaaatatcatttct 23880096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 6365230 - 6365187
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
6365230 ttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttct 6365187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 7157538 - 7157479
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgg 89  Q
    ||||| |||| ||||||||||||||||||||||||||| ||| ||| |||||||| ||||    
7157538 gaacctaggatcttggttaagttagaagagactcgttctatcccatctaagcgctattgg 7157479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 32750042 - 32749999
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||||| ||||||||||||||||||||||||||    
32750042 ttgtcaaaaagttgtgaaaaagtggttgtacaaatatcatttct 32749999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 9979134 - 9979097
Alignment:
229 aaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||| ||||||||||||||||||||||||||    
9979134 aaaaattgtgaaaaagtggttgtacaaatatcatttct 9979097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 35965619 - 35965578
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    ||||||||||||||| | ||||||||||||||||||||||||    
35965619 ttgtcaaaaaattgtaataaagtggttgtacaaatatcattt 35965578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 4738599 - 4738642
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
4738599 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 4738642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 7086151 - 7086194
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| ||||||||||||||  |||||||||||||||||    
7086151 ttgtcaaaaagttgtgagaaagtggcggtacaaatatcatttct 7086194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 11980695 - 11980652
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
11980695 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttct 11980652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 13104523 - 13104480
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||    
13104523 ttgtcaaaaagttgagagaaagtggttgtacgaatatcatttct 13104480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 13466102 - 13466145
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||    
13466102 ttgttaaaaaattgttagaaattggttgtacaaatatcatttct 13466145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 14797677 - 14797720
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
14797677 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttct 14797720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 15283277 - 15283320
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||    
15283277 ttgtctaaaaattgtcacaaagtggttgtacaaatatcatttct 15283320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 31635837 - 31635880
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
31635837 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttct 31635880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 33296098 - 33296141
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
33296098 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 33296141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 34442157 - 34442114
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||| | | ||||||||||||||||||||||||||    
34442157 ttgtcaaaaaattatcataaagtggttgtacaaatatcatttct 34442114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 36133018 - 36132975
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||| |||||||| | ||||||||||||||||||||||||||    
36133018 ttgtcacaaaattgtcacaaagtggttgtacaaatatcatttct 36132975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 993794 - 993740
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgct 84  Q
    ||||||||||||||||||||| || ||||||| |||  |||||||| ||||||||    
993794 gaacccaggaccttggttaagctataagagacacgtgtcatctcatctaagcgct 993740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 5167774 - 5167812
Alignment:
228 aaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| | ||||||||||||||||||||||||||    
5167774 aaaaaattgtcacaaagtggttgtacaaatatcatttct 5167812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 12065958 - 12065920
Alignment:
226 tcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    |||||||||||| | ||||||||||||||||||||||||    
12065958 tcaaaaaattgttacaaagtggttgtacaaatatcattt 12065920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 3772650 - 3772703
Alignment:
36 aggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgg 89  Q
    |||||||||||||| |||||||||||| ||  |||||||| |||||||| ||||    
3772650 aggaccttggttaaattagaagagacttgtgtcatctcatctaagcgctcttgg 3772703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 14871678 - 14871641
Alignment:
229 aaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||| ||||| ||||||||||||||||||||||    
14871678 aaaaattgtaagaaaatggttgtacaaatatcatttct 14871641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 14876744 - 14876707
Alignment:
229 aaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||| ||||| ||||||||||||||||||||||    
14876744 aaaaattgtaagaaaatggttgtacaaatatcatttct 14876707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 43665666 - 43665625
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    |||||||||| |||| | ||||||||||||||||||||||||    
43665666 ttgtcaaaaagttgttaaaaagtggttgtacaaatatcattt 43665625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 266
Target Start/End: Original strand, 15901952 - 15901984
Alignment:
234 ttgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||||||||||||| ||||||||||||    
15901952 ttgtgagaaagtggttgtacgaatatcatttct 15901984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 37348572 - 37348612
Alignment:
42 ttggttaagttagaagagactcgttccatctcatttaagcg 82  Q
    ||||||||  |||||||||||||| ||||||||||||||||    
37348572 ttggttaaactagaagagactcgtaccatctcatttaagcg 37348612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 41040303 - 41040267
Alignment:
230 aaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||| | ||||||||||||||||||||||||||    
41040303 aaaattgtcacaaagtggttgtacaaatatcatttct 41040267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 30996066 - 30996127
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| ||||||    
30996066 gaacccaggaccttggttaagatagaagagacccgttccatctcatctaagcgctcttgggt 30996127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 46604661 - 46604720
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgg 89  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
46604661 gaacccagaaccttggttaagttataagagactcgttccatctcatctaagcgctcttgg 46604720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 48204412 - 48204474
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggtg 92  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||| ||||| || |||||||    
48204412 gaacccaagaccttggttaagctagaagagactcgttccatctcatctaagcactcttgggtg 48204474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 25224739 - 25224678
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||| |||||||| ||||||    
25224739 gaacccaggaccttggttaagctagaagagacccgtttcatctcatctaagcgctcttgggt 25224678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 8066399 - 8066356
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
8066399 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 8066356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 36442260 - 36442217
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
36442260 ttgtcaaaaaattgtgagaaagtggttatacaaatatcatttct 36442217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 37303101 - 37303144
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
37303101 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 37303144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 51410850 - 51410807
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
51410850 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 51410807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 39540279 - 39540238
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    |||||||||| |||||||||||||||||||||||||||||||    
39540279 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcattt 39540238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 108475 - 108432
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
108475 ttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttct 108432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 5398962 - 5398919
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
5398962 ttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttct 5398919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 22813116 - 22813073
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
22813116 ttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttct 22813073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 26279928 - 26279885
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
26279928 ttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttct 26279885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 37215258 - 37215301
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| |||||||||||||| |||||||||||||    
37215258 ttgtcaaaaaattgtaagaaagtggttgtataaatatcatttct 37215301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 37303427 - 37303384
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
37303427 ttgtcaaaaagttgcgagaaagtggttgtacaaatatcatttct 37303384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 14352583 - 14352533
Alignment:
41 cttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||||||| ||||||||||| |||||||||||| |||||||| ||||||    
14352583 cttggttaagctagaagagacttgttccatctcatctaagcgctcttgggt 14352533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 38331163 - 38331109
Alignment:
35 caggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgg 89  Q
    |||||| |||||||||||||||||||| || |||||||||| |||||||| ||||    
38331163 caggacattggttaagttagaagagacccgatccatctcatctaagcgctcttgg 38331109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 28967291 - 28967340
Alignment:
38 gaccttggttaagttagaagagactcgttccatctcatttaagcgctttt 87  Q
    ||||||||||||||||||||||||||||  |||||||| |||||| ||||    
28967291 gaccttggttaagttagaagagactcgtgtcatctcatgtaagcgttttt 28967340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 31326748 - 31326711
Alignment:
229 aaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||| ||||||||||||||||||||||||||||||    
31326748 aaaaattctgagaaagtggttgtacaaatatcatttct 31326711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 48649624 - 48649583
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    |||||||||| |||| ||||||||||||||||||||||||||    
48649624 ttgtcaaaaagttgttagaaagtggttgtacaaatatcattt 48649583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 28269850 - 28269810
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatt 263  Q
    |||| ||||| ||||||||||||||||||||||||||||||    
28269850 ttgtaaaaaagttgtgagaaagtggttgtacaaatatcatt 28269810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 38088666 - 38088614
Alignment:
39 accttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||||||||| |||||||||| |||| |||||||| |||||||| ||||||    
38088666 accttggttaagctagaagagacccgtttcatctcatctaagcgctcttgggt 38088614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 11335329 - 11335372
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
11335329 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttct 11335372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 12792682 - 12792639
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||    
12792682 ttgtctaaaaattgtcacaaagtggttgtacaaatatcatttct 12792639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 18169201 - 18169158
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
18169201 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 18169158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 20215992 - 20215949
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||    
20215992 ttgtctaaaaattgtcacaaagtggttgtacaaatatcatttct 20215949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 22288275 - 22288216
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgg 89  Q
    |||| |||||| ||||||||||||||||||| || |  |||||||| |||||||||||||    
22288275 gaactcaggactttggttaagttagaagagattcatgtcatctcatctaagcgcttttgg 22288216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 43176246 - 43176203
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||| |||||||| | ||||||||||||||||||||||||||    
43176246 ttgtcataaaattgtaacaaagtggttgtacaaatatcatttct 43176203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 43900784 - 43900827
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
43900784 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatttct 43900827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 44334828 - 44334871
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
44334828 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatttct 44334871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 46003749 - 46003706
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||    
46003749 ttgtcaaaagattgtaagaaagtggatgtacaaatatcatttct 46003706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 51032651 - 51032694
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
51032651 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttct 51032694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 51464299 - 51464342
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
51464299 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 51464342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 27763761 - 27763702
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||||||||||||||||| |||  ||||| ||||| ||||||| |||||||| ||||||    
27763761 gaacccaggaccttggttaagctag--gagacccgttctatctcatctaagcgctcttgggt 27763702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 30251010 - 30251048
Alignment:
226 tcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    |||||||||||| ||||| ||||||||||||||||||||    
30251010 tcaaaaaattgttagaaaatggttgtacaaatatcattt 30251048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 33007404 - 33007363
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    |||||||||| |||||||||| || |||||||||||||||||    
33007404 ttgtcaaaaagttgtgagaaattgattgtacaaatatcattt 33007363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 34607953 - 34607990
Alignment:
229 aaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||| | ||||||||||||||||||||||||||    
34607953 aaaaattgtcacaaagtggttgtacaaatatcatttct 34607990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 34733318 - 34733359
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    |||||||||| |||| | ||||||||||||||||||||||||    
34733318 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 34733359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 41369641 - 41369600
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    ||||||||||||| | ||||| ||||||||||||||||||||    
41369641 ttgtcaaaaaattattagaaaatggttgtacaaatatcattt 41369600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 49761219 - 49761256
Alignment:
229 aaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||| ||||| ||||||||||||||||||||||    
49761219 aaaaattgttagaaaatggttgtacaaatatcatttct 49761256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 9719475 - 9719511
Alignment:
230 aaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||| | ||||||||||||||||||||||||||    
9719475 aaaattgtcaaaaagtggttgtacaaatatcatttct 9719511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 260
Target Start/End: Complemental strand, 32536779 - 32536747
Alignment:
228 aaaaaattgtgagaaagtggttgtacaaatatc 260  Q
    |||||||||| ||||||||||||||||||||||    
32536779 aaaaaattgttagaaagtggttgtacaaatatc 32536747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 34271520 - 34271560
Alignment:
226 tcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||| |||| | ||||||||||||||||||||||||||    
34271520 tcaaaaagttgttacaaagtggttgtacaaatatcatttct 34271560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 46315985 - 46316025
Alignment:
226 tcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||| |||| | ||||||||||||||||||||||||||    
46315985 tcaaaaagttgtcataaagtggttgtacaaatatcatttct 46316025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 50745408 - 50745372
Alignment:
228 aaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    |||||||||| ||||| ||||||||||||||||||||    
50745408 aaaaaattgttagaaaatggttgtacaaatatcattt 50745372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 9738720 - 9738763
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
9738720 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 9738763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 30936044 - 30935983
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| |||| ||| ||||||    
30936044 gaactcaggaccttggttaagttagaagagacccgttccatctcatctaagtgctcttgggt 30935983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 10553110 - 10553153
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
10553110 ttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttct 10553153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 2743973 - 2743928
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcat 75  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||    
2743973 gaacccaggaccttggttaagctagaagagacccgttccatctcat 2743928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 4125125 - 4125186
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||||||| ||||||||| |||||||||| ||||||||||||| |||| ||| ||||||    
4125125 gaacccaggacattggttaagctagaagagacccgttccatctcatctaagtgctcttgggt 4125186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 39086853 - 39086796
Alignment:
35 caggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggtg 92  Q
    |||||||||||||||| |||||||| | ||||||||||||| |||||||| |||||||    
39086853 caggaccttggttaagctagaagaggcccgttccatctcatctaagcgctcttgggtg 39086796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 12958187 - 12958247
Alignment:
31 aacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||| ||||| || ||||||    
12958187 aacccatgaccttggttaagctagaagagactagttccatctcatctaagcactcttgggt 12958247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 3988949 - 3988906
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
3988949 ttgtcaaaaatttgttagaaagtggttgtacaaatatcatttct 3988906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 22767176 - 22767133
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
22767176 ttgtcaaaaagttgtgagaaaatggttgtacaaatatcatttct 22767133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 31806343 - 31806300
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||    
31806343 ttgtcaaaaaattgttagaaaatggttgtacaaatatcatttct 31806300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 34996387 - 34996430
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
34996387 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttct 34996430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 40102067 - 40102024
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||||| ||||||||||||||||||||||||||    
40102067 ttgtcaaaaagttgtgaaaaagtggttgtacaaatatcatttct 40102024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 42716364 - 42716321
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
42716364 ttgtcaaaaaattatgaaaaagtggttgtacaaatatcatttct 42716321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 295584 - 295546
Alignment:
228 aaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||||| ||||||||||||||||||||||||||    
295584 aaaaaattgtgataaagtggttgtacaaatatcatttct 295546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 13468846 - 13468888
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatct 72  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
13468846 gaacccaggaccttggttaagctagaagagacccgttccatct 13468888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 19715827 - 19715881
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgct 84  Q
    ||||||||||||||||||||| ||||| ||||  |||||||||||| ||||||||    
19715827 gaacccaggaccttggttaagctagaaaagacatgttccatctcatctaagcgct 19715881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 8074751 - 8074794
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||| |||||||||| | ||||||||||||||||||||||||||    
8074751 ttgttaaaaaattgtcataaagtggttgtacaaatatcatttct 8074794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 8841074 - 8841031
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||| | | ||||||||||||||||||||||||||    
8841074 ttgtcaaaaaattctcacaaagtggttgtacaaatatcatttct 8841031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 12959982 - 12959939
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||    
12959982 ttgtcaaaaaattgttagaaattggttgtgcaaatatcatttct 12959939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 20473823 - 20473780
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||    
20473823 ttgtcaaaaaattgttataaaatggttgtacaaatatcatttct 20473780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 21418619 - 21418662
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||  |||| ||||||||||||||||||||||||||||    
21418619 ttgtcaaaaggttgtcagaaagtggttgtacaaatatcatttct 21418662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 35633996 - 35634039
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| |||||||||||||| |||||||||||||    
35633996 ttgtcaaaaagttgtcagaaagtggttgtagaaatatcatttct 35634039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 35818981 - 35818938
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||    
35818981 ttgtcaaaaaattgttagaaaatggttgtgcaaatatcatttct 35818938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 40608557 - 40608514
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| ||||| || |||||||||||||||||||    
40608557 ttgtcaaaaaattgttagaaattgattgtacaaatatcatttct 40608514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 41305009 - 41305052
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||| |||||||| | ||||||||||||||||||||||||||    
41305009 ttgtcataaaattgtaataaagtggttgtacaaatatcatttct 41305052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 43873718 - 43873761
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||    
43873718 ttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttct 43873761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 45101440 - 45101397
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
45101440 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 45101397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 11584134 - 11584097
Alignment:
229 aaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||| ||||| ||||||||||||||||||||||    
11584134 aaaaattgtaagaaaatggttgtacaaatatcatttct 11584097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 15682969 - 15682928
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatc 71  Q
    |||| |||||||||| ||||| ||||||||||||||||||||    
15682969 gaactcaggaccttgattaagctagaagagactcgttccatc 15682928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 27836224 - 27836183
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    |||||||||| |||| | ||||||||||||||||||||||||    
27836224 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 27836183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 34378294 - 34378245
Alignment:
42 ttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||||||||||| |||||| ||  ||| ||||||||||||||||||||    
34378294 ttggttaagttagatgagacttgtgtcatgtcatttaagcgcttttgggt 34378245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 36994601 - 36994662
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||||||||||||||||  ||||||||||  || |||||| || |||||||| ||||||    
36994601 gaacccaggaccttggttaaactagaagagacatgtgccatcttatctaagcgctcttgggt 36994662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 42786693 - 42786730
Alignment:
229 aaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||| ||||| ||||||||||||||||||||||    
42786693 aaaaattgtaagaaaatggttgtacaaatatcatttct 42786730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 3756945 - 3756905
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatt 263  Q
    |||||||||| |||| | |||||||||||||||||||||||    
3756945 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatt 3756905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 34494668 - 34494708
Alignment:
226 tcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||||| ||||| | ||||||||||||||||||||    
34494668 tcaaaaaattgttagaaaatagttgtacaaatatcatttct 34494708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 37033131 - 37033171
Alignment:
226 tcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||| |||| ||||||||||||| ||||||||||||||    
37033131 tcaaaaagttgtcagaaagtggttgtgcaaatatcatttct 37033171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 21747142 - 21747201
Alignment:
32 acccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||| |||| ||||||    
21747142 acccaggaccttggttaagttagaagagacccgttccatctcatctaaacgctcttgggt 21747201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 8839382 - 8839443
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||| |||||||| ||||||    
8839382 gaacccaggaccttggttaagctagaagagacccgtttcatctcatctaagcgctcttgggt 8839443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 13254202 - 13254263
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||| |||||||||||||||| |||||||||| ||||||||||||| |||||||| ||||||    
13254202 gaactcaggaccttggttaagctagaagagacccgttccatctcatctaagcgctcttgggt 13254263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 29059845 - 29059784
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||| ||||||    
29059845 gaacccaggaccttggttaagctagaagagacccgttccatctcatctaagtgctcttgggt 29059784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 2657937 - 2657996
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgg 89  Q
    |||| |||| ||||| |||||||||||||||||||||||||||||| |||||||| ||||    
2657937 gaactcagggccttgattaagttagaagagactcgttccatctcatctaagcgctcttgg 2657996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 5905850 - 5905801
Alignment:
42 ttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||||||||    
5905850 ttggttaagttagaagagactcgttctatctcatctaagcgtttttgggt 5905801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 28537430 - 28537369
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||||  |||||| |||||||||||||||| ||||||||||||| |||||||| ||||||    
28537430 gaacccaaaaccttgattaagttagaagagacccgttccatctcatctaagcgctcttgggt 28537369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 31492143 - 31492098
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcat 75  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||    
31492143 gaacccaggaccttggttaagctagaagagacccgttccatctcat 31492098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 19477351 - 19477411
Alignment:
31 aacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||| |||||||||||| |||||||||| ||||||||||||| ||| |||| ||||||    
19477351 aacccagaaccttggttaagctagaagagacccgttccatctcatctaaacgctcttgggt 19477411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 2790221 - 2790178
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
2790221 ttgtcaaaaaattgttacaaagtggttgtacaaatatcatttct 2790178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 21752702 - 21752659
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| ||||||||||||| |||||||||||||||||||    
21752702 ttgtcaaaaagttgtgagaaagtgattgtacaaatatcatttct 21752659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 28824547 - 28824504
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
28824547 ttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttct 28824504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 33212086 - 33212043
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||    
33212086 ttgtcaaaaaattgttagaaaatggttgtacaaatatcatttct 33212043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 33684724 - 33684681
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||| ||||| |||||||||||||||||||||||||||||||||    
33684724 ttgtaaaaaagttgtgagaaagtggttgtacaaatatcatttct 33684681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 40212516 - 40212559
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||    
40212516 ttgtcaaaaaattgttagaaagtggttgtacaaatattatttct 40212559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 41966376 - 41966333
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
41966376 ttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttct 41966333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 32469959 - 32469909
Alignment:
41 cttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||| ||||| |||||||||||||||||||||||| ||| |||||||||||    
32469959 cttgattaagctagaagagactcgttccatctcatctaaacgcttttgggt 32469909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 43213356 - 43213320
Alignment:
230 aaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||| ||||||||||||||||||||||||||||    
43213356 aaaattgttagaaagtggttgtacaaatatcatttct 43213320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 2756956 - 2756999
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
2756956 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttct 2756999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 9055311 - 9055268
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
9055311 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttct 9055268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 31364911 - 31364954
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | |||||||| |||||||||||||||||    
31364911 ttgtcaaaaaattgtaataaagtggtcgtacaaatatcatttct 31364954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 30941216 - 30941179
Alignment:
229 aaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||| | ||||||||||||||||||||||||||    
30941216 aaaaattgttacaaagtggttgtacaaatatcatttct 30941179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 40099378 - 40099427
Alignment:
35 caggaccttggttaagttagaagagactcgttccatctcatttaagcgct 84  Q
    ||||| ||| |||||| |||||||||| ||||||||||||| ||||||||    
40099378 caggatcttagttaagctagaagagacccgttccatctcatctaagcgct 40099427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 47644749 - 47644708
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    ||||||||||||| | | ||||||||||||||||||||||||    
47644749 ttgtcaaaaaattataataaagtggttgtacaaatatcattt 47644708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 21411734 - 21411786
Alignment:
39 accttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||| ||||||||||||||||||| |  ||| |||| |||||||||||||||    
21411734 accttcgttaagttagaagagactcatgtcatttcatataagcgcttttgggt 21411786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 31982098 - 31982058
Alignment:
226 tcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||| ||||| | ||||||||||||||||||||||||||    
31982098 tcaaaagattgtcacaaagtggttgtacaaatatcatttct 31982058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 42276132 - 42276092
Alignment:
226 tcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||||| ||||| | ||||||||||||||||||||    
42276132 tcaaaaaattgttagaaaatagttgtacaaatatcatttct 42276092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 15614674 - 15614733
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgg 89  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||| ||||    
15614674 gaacccatgacattggttaagttagaagagactcgttccatctcatataagcgctcttgg 15614733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 8395386 - 8395343
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
8395386 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 8395343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 3821422 - 3821379
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
3821422 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttct 3821379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 12411188 - 12411137
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagc 81  Q
    |||| |||||||||||||||||||||||||||  |||||||||||| |||||    
12411188 gaactcaggaccttggttaagttagaagagacctgttccatctcatctaagc 12411137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 29383601 - 29383558
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
29383601 ttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttct 29383558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 21029084 - 21029145
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||| ||||||||||||| |||||||||| ||| ||||||||| ||| || ||||||||    
21029084 gaacccaagaccttggttaagctagaagagacccgtgccatctcatataaacgattttgggt 21029145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 21910245 - 21910184
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||||||| |||||||||| ||||||||||| ||| |||||||| ||| |||| ||||||    
21910245 gaacccaggatcttggttaagctagaagagacttgtttcatctcatctaaacgctcttgggt 21910184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 11785399 - 11785356
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||    
11785399 ttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttct 11785356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 27102159 - 27102116
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||    
27102159 ttgtcaaaaaattattagaaaatggttgtacaaatatcatttct 27102116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 27143981 - 27143938
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||    
27143981 ttgtcaaaaaattattagaaaatggttgtacaaatatcatttct 27143938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 30796102 - 30796145
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||| |||||||||| | ||||||||||||||||||||||||||    
30796102 ttgtaaaaaaattgtcacaaagtggttgtacaaatatcatttct 30796145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 32457279 - 32457322
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
32457279 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 32457322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 29643444 - 29643486
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttc 265  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||    
29643444 ttgtcaaaaaattgtcagaaaatggttgtacatatatcatttc 29643486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 16337099 - 16337140
Alignment:
225 gtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||| | |||||| |||||||||||||||||||    
16337099 gtcaaaaaattgtcataaagtgattgtacaaatatcatttct 16337140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 31480861 - 31480902
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    |||||||||  |||| ||||||||||||||||||||||||||    
31480861 ttgtcaaaatgttgtcagaaagtggttgtacaaatatcattt 31480902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 28253059 - 28253016
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
28253059 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 28253016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 31436864 - 31436821
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
31436864 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 31436821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 36690599 - 36690642
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
36690599 ttgtcaaaaaattgtgagaaattggttgtacaaatatcatttct 36690642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 36706700 - 36706743
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
36706700 ttgtcaaaaaattgtgagaaattggttgtacaaatatcatttct 36706743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 52233248 - 52233291
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
52233248 ttgtcaaaaaattgtgagaaaatggttgtacaaatatcatttct 52233291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 16756121 - 16756061
Alignment:
31 aacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||| |||||||||||| |||||||||  ||||||||||||| |||||||| ||||||    
16756121 aacccagaaccttggttaagctagaagagatccgttccatctcatctaagcgctcttgggt 16756061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 1615080 - 1615037
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||| ||||| |||||||||||||||||||||||||||||||||    
1615080 ttgttaaaaagttgtgagaaagtggttgtacaaatatcatttct 1615037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 11068469 - 11068426
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
11068469 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttct 11068426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 14500361 - 14500420
Alignment:
32 acccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||| ||||| || ||||||    
14500361 acccaggaccttggttaagctagaagagacccgttccatcgcatctaagcactcttgggt 14500420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 30505363 - 30505406
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||    
30505363 ttgtcaaaaaattgttagaaattggttgtacaaatatcatttct 30505406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 39010858 - 39010815
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
39010858 ttgtcaaaaagttgtgagaaagtggctgtacaaatatcatttct 39010815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 44112498 - 44112455
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
44112498 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttct 44112455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 44641930 - 44641973
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
44641930 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttct 44641973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 45806276 - 45806222
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgct 84  Q
    |||| |||||||||||||||| |||||||||| ||||| ||||||| ||||||||    
45806276 gaactcaggaccttggttaagatagaagagacccgttctatctcatctaagcgct 45806222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 28724697 - 28724652
Alignment:
46 ttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||    
28724697 ttaagctagaagagactcgttccatctcatctaagcgctcttgggt 28724652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 17600600 - 17600660
Alignment:
31 aacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||| ||||||||||||| |||||||||| |||  |||||||| ||| |||||||||||    
17600600 aacccaagaccttggttaagctagaagagacccgtgtcatctcatctaaacgcttttgggt 17600660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 3606121 - 3606164
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
3606121 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttct 3606164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 8464540 - 8464583
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
8464540 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatttct 8464583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 18541078 - 18541121
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
18541078 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttct 18541121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 27810274 - 27810317
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
27810274 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttct 27810317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 30439294 - 30439251
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||    
30439294 ttgtcaaaaaattgtcataaattggttgtacaaatatcatttct 30439251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 31427984 - 31428027
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||    
31427984 ttgtcaagaaattgtcacaaagtggttgtacaaatatcatttct 31428027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 39669850 - 39669807
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||    
39669850 ttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttct 39669807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 45042305 - 45042262
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||    
45042305 ttgtcaaaaaattgttagaaaatagttgtacaaatatcatttct 45042262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 45470867 - 45470910
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
45470867 ttgtcaaaaaattgtaataaggtggttgtacaaatatcatttct 45470910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 49596279 - 49596236
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||    
49596279 ttgtcaaaaaattgtaataaaatggttgtacaaatatcatttct 49596236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 50226906 - 50226949
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
50226906 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 50226949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 52912661 - 52912602
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgg 89  Q
    ||||||| || |||||||||| ||  |||||| ||||||||||||||||| |||||||||    
52912661 gaacccaagatcttggttaagctaatagagacccgttccatctcatttaaacgcttttgg 52912602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 25655365 - 25655426
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||||||| |||||| ||||||||||||| | | |||||||||||| ||| |||| ||||||    
25655365 gaacccagaaccttgattaagttagaagatatttgttccatctcatctaaacgctattgggt 25655426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 32966305 - 32966268
Alignment:
229 aaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||| | ||||||||||||||||||||||||||    
32966305 aaaaattgtcacaaagtggttgtacaaatatcatttct 32966268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 266
Target Start/End: Complemental strand, 25061784 - 25061756
Alignment:
238 gagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||||||||||||||||||||||    
25061784 gagaaagtggttgtacaaatatcatttct 25061756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 37138557 - 37138593
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatat 259  Q
    ||||||||||||||| | |||||||||||||||||||    
37138557 ttgtcaaaaaattgtcataaagtggttgtacaaatat 37138593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 266
Target Start/End: Complemental strand, 38913631 - 38913599
Alignment:
234 ttgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||||||||| |||||||||||    
38913631 ttgtgagaaagtggttgtacagatatcatttct 38913599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 45740574 - 45740614
Alignment:
226 tcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||| |||| | ||||||||||||||||||||||||||    
45740574 tcaaaaagttgtcacaaagtggttgtacaaatatcatttct 45740614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 10591967 - 10591906
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||| |||| ||| ||||||    
10591967 gaacccaggaccttggttaatctagaagagacccgttccatctcatctaagtgctcttgggt 10591906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 20125433 - 20125390
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
20125433 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttct 20125390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 27392729 - 27392772
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||||||| ||| |||||||||||||||||||||||||    
27392729 ttgtcaaaaaattgcgagcaagtggttgtacaaatatcatttct 27392772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 36416089 - 36416132
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||    
36416089 ttgtcaaaaaattgttagaaaatggttgtacaaatatcatttct 36416132  T

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Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 42909763 - 42909720
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||||||||||||||||||||||||| ||||||    
42909763 ttgtcaaaaagttgtgagaaagtggttgtacaaatataatttct 42909720  T

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Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 28023544 - 28023605
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcatttaagcgcttttgggt 91  Q
    |||| |||||| ||||||||| |||||||||  ||||||||||||| |||||||| ||||||    
28023544 gaactcaggacattggttaagctagaagagatccgttccatctcatctaagcgctcttgggt 28023605  T

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Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 19376162 - 19376202
Alignment:
226 tcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
19376162 tcaaaaagttgtcagaaagtggttgtacaaatatcatttct 19376202  T

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Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 8087843 - 8087800
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||| | ||||||||||||||||||||| ||||||    
8087843 ttgtcaaaaaattattagaaagtggttgtacaaatattatttct 8087800  T

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Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 12661974 - 12662017
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||| ||||||||||||||||||    
12661974 ttgtcaaaaaattgtcacaaagtggatgtacaaatatcatttct 12662017  T

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Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 32873176 - 32873219
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
32873176 ttgtcaaaaagttgttagaaattggttgtacaaatatcatttct 32873219  T

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Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 33393678 - 33393635
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||    
33393678 ttgttaaaaagttgtgagaaaatggttgtacaaatatcatttct 33393635  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 33743360 - 33743403
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||    
33743360 ttgtcaaaaaattgtaataaagtggttatacaaatatcatttct 33743403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 34381056 - 34381013
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
34381056 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 34381013  T

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Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 38500987 - 38500944
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||    
38500987 ttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttct 38500944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 39595316 - 39595273
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
39595316 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 39595273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 22188106 - 22188148
Alignment:
39 accttggttaagttagaagagactcgttccatctcatttaagc 81  Q
    |||||||||||||||||||||| |||||| ||||||| |||||    
22188106 accttggttaagttagaagagattcgttcaatctcatctaagc 22188148  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 3141539 - 3141498
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    ||||||||||||||| | |||||||||||| |||||||||||    
3141539 ttgtcaaaaaattgtcacaaagtggttgtataaatatcattt 3141498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 30785087 - 30785132
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttccatctcat 75  Q
    ||||||| ||| ||| ||||| ||||||||||||||||||||||||    
30785087 gaacccaagacattgattaagctagaagagactcgttccatctcat 30785132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 30334789 - 30334825
Alignment:
230 aaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||| | ||||||||||||||||||||||||||    
30334789 aaaattgtcataaagtggttgtacaaatatcatttct 30334825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 165
Target Start/End: Complemental strand, 42909892 - 42909864
Alignment:
137 cttgagtagtgttatttgaacaaccatat 165  Q
    |||||||||||||||||||||||||||||    
42909892 cttgagtagtgttatttgaacaaccatat 42909864  T

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Target: scaffold0504 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 10762 - 10805
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
10762 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttct 10805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 199310 - 199267
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
199310 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttct 199267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 266
Target Start/End: Original strand, 3298 - 3330
Alignment:
234 ttgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||||||||||||||||||||||||||    
3298 ttgtgagaaagtggttgtacaaatatcatttct 3330  T

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Target: scaffold0238 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 16431 - 16388
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||| | | ||||||||||||||||||||||||||    
16431 ttgtcaaaaaattataataaagtggttgtacaaatatcatttct 16388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 26371 - 26332
Alignment:
30 gaacccaggaccttggttaagttagaagagactcgttcca 69  Q
    ||||||||||||||||||||| |||||||||| |||||||    
26371 gaacccaggaccttggttaagctagaagagacccgttcca 26332  T

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Target: scaffold0154 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 9875 - 9918
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||||||||||| ||| || |||||||||||||||||||    
9875 ttgtcaaaaaattgtgaaaaaatgattgtacaaatatcatttct 9918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 9497 - 9454
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||    
9497 ttgtcaacaaattgtcataaagtggttgtacaaatatcatttct 9454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 15561 - 15604
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
15561 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 15604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 17480 - 17437
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||||    
17480 ttgtctaaaaattgtgacaaaatggttgtacaaatatcatttct 17437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 91992 - 91949
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| ||||||||||||||||||||| ||||||    
91992 ttgtcaaaaagttgttagaaagtggttgtacaaatattatttct 91949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 219691 - 219734
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
219691 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 219734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 25741 - 25704
Alignment:
229 aaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    ||||||||| | ||||||||||||||||||||||||||    
25741 aaaaattgtcataaagtggttgtacaaatatcatttct 25704  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 263722 - 263763
Alignment:
223 ttgtcaaaaaattgtgagaaagtggttgtacaaatatcattt 264  Q
    |||| ||||| |||| ||||||||||||||||||||||||||    
263722 ttgttaaaaagttgttagaaagtggttgtacaaatatcattt 263763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 38920 - 38880
Alignment:
226 tcaaaaaattgtgagaaagtggttgtacaaatatcatttct 266  Q
    |||||||||||| | ||||||||||||||||||| ||||||    
38920 tcaaaaaattgtcacaaagtggttgtacaaatattatttct 38880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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