View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0942_low_124 (Length: 264)
Name: NF0942_low_124
Description: NF0942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0942_low_124 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 29 - 264
Target Start/End: Complemental strand, 45182053 - 45181822
Alignment:
| Q |
29 |
aataatgaccttactcctgatcatcacaagtttttcttgtaccaacttcttcgaggcataaataaaatatatacattcaggtatccatcattaattataa |
128 |
Q |
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| T |
45182053 |
aataatgaccttactcctgatcatcacaagtttttcttgtaccaacttcttcgaggcataaa----atatatacattcaggtatccatcattaattataa |
45181958 |
T |
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| Q |
129 |
tcacttcacttcctttattattttagatagtaaactcatgtatctatttcattttggactggctcgagcatcatttagcgacactgcatctactatatac |
228 |
Q |
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| T |
45181957 |
tcacttcacttcctttattattttagatattaaactcatgtatctatttcattttggactggctcgagcatcatttagcgacactgcatctactatatac |
45181858 |
T |
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| Q |
229 |
tggactgtaagtagtactctaatagtaatacacaac |
264 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
45181857 |
tggactgtaagtagtactctaatagtaatacacaac |
45181822 |
T |
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