View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0942_low_136 (Length: 251)
Name: NF0942_low_136
Description: NF0942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0942_low_136 |
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Alignment Details
Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 84 - 235
Target Start/End: Original strand, 36076178 - 36076329
Alignment:
| Q |
84 |
ggtgtaacgataataggataatcgtccttacatatttattatcatttgaaatgtttggggtgcatgggggagggaattttgttcctacactgcatgcgct |
183 |
Q |
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| T |
36076178 |
ggtgtaacgataataggataatcgtccttacatatttattatcatttgaaatgtttggggtgcatgggggagggaattttgttcctacactgcatgcgct |
36076277 |
T |
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| Q |
184 |
tggagcgcatggaggcacatcctggagtgcatggccagaaaaatgtgcggaa |
235 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36076278 |
tggagcgcatggaggcacatcctggagtgcatggccagaaaaatgtgcggaa |
36076329 |
T |
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