View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0942_low_138 (Length: 251)
Name: NF0942_low_138
Description: NF0942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0942_low_138 |
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Alignment Details
Target: chr3 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 31062644 - 31062872
Alignment:
| Q |
1 |
ccaaacatctagtcatcaggacaacacatctggaccaaa--------tatcaaaatcagagatcagaatgacgttcatatcaagtcatcaggacgaaaca |
92 |
Q |
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| T |
31062644 |
ccaaacatctagtcatcaggacaaaacatctggaccaaacatcaaaatatcaaaatcagagatcaaaatgacattcatatcaagtcatcaggacgaaaca |
31062743 |
T |
|
| Q |
93 |
tatttaaacaaggttctgatccggcatcagaatagaagttacttgttctcaaagactgtaaaataaaaaccatagaaaaagcaacatcattccttggctc |
192 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31062744 |
tatctaaacaaggttctgatccggcatcagaatagaagttacttgttctcaaagactgtaaaataaaaaccatagaaaaagcaacatcattccttggctc |
31062843 |
T |
|
| Q |
193 |
tcaagattctgaattcaccacaaaagaaa |
221 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
31062844 |
tcaagattctgaattcaccacaaaagaaa |
31062872 |
T |
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