View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0942_low_140 (Length: 250)

Name: NF0942_low_140
Description: NF0942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0942_low_140
NF0942_low_140
[»] chr2 (3 HSPs)
chr2 (51-177)||(829137-829263)
chr2 (51-177)||(28714741-28714867)
chr2 (51-176)||(13841451-13841576)
[»] chr8 (2 HSPs)
chr8 (51-177)||(9440624-9440750)
chr8 (51-177)||(24595024-24595150)
[»] chr6 (4 HSPs)
chr6 (51-177)||(26977426-26977552)
chr6 (51-177)||(27875242-27875368)
chr6 (51-177)||(1472997-1473123)
chr6 (55-177)||(21965051-21965173)
[»] chr5 (2 HSPs)
chr5 (51-177)||(34355668-34355794)
chr5 (51-177)||(41722068-41722194)
[»] chr4 (4 HSPs)
chr4 (51-177)||(30946716-30946842)
chr4 (51-177)||(42269561-42269687)
chr4 (51-177)||(48698354-48698480)
chr4 (51-177)||(2002541-2002667)
[»] chr3 (6 HSPs)
chr3 (51-177)||(5819808-5819934)
chr3 (51-177)||(54544803-54544929)
chr3 (51-177)||(42588606-42588732)
chr3 (55-177)||(25877957-25878079)
chr3 (51-111)||(25880379-25880439)
chr3 (51-95)||(25880583-25880627)
[»] scaffold0074 (1 HSPs)
scaffold0074 (51-177)||(28568-28694)
[»] chr7 (2 HSPs)
chr7 (55-173)||(2324622-2324740)
chr7 (51-177)||(7506109-7506235)
[»] chr1 (1 HSPs)
chr1 (55-177)||(34973192-34973314)


Alignment Details
Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 51 - 177
Target Start/End: Complemental strand, 829263 - 829137
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  829263 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 829164  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||||||||||||||||||||||||||    
T  829163 aattcacaggaagtggggtagagattg 829137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 51 - 177
Target Start/End: Complemental strand, 28714867 - 28714741
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||| || ||||| |||||    
T  28714867 atggcatacataaggcttcccaccgccgatgcatacggtattcgagacatttacatcctctctgcttcattgctaggactcatacatgtggatagtttaa 28714768  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||||| || |||||||||||||||||    
T  28714767 aattcatagaaagtggggtagagattg 28714741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 176
Target Start/End: Original strand, 13841451 - 13841576
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    |||| ||||||||||||| |||||  | |||||||||||||||||||||| ||||||||| | |||||||| |||||||| ||||||  | |||||||||    
T  13841451 atggaatacataaggctttccaccatcaatgcatacggtactcgagacatctccatcctcactacttcatttctaggactgatacctacgaataatttaa 13841550  T
Q  151 aattcacaggaagtggggtagagatt 176  Q
    ||||||||||||||| ||||||||||    
T  13841551 aattcacaggaagtgaggtagagatt 13841576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 51 - 177
Target Start/End: Original strand, 9440624 - 9440750
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9440624 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccgcttcattgctaggactcatacctgaggataatttaa 9440723  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||||||||||||||||||||||||||    
T  9440724 aattcacaggaagtggggtagagattg 9440750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 51 - 177
Target Start/End: Original strand, 24595024 - 24595150
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||  ||| ||||||||     
T  24595024 atggcatacataaggcttcccaccgctgatgcatagggtactcgagacatttccatcctctctgcttcattgctaggattcatactggagaataatttat 24595123  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||| | ||||||||||||||| ||||    
T  24595124 aattgataggaagtggggtagatattg 24595150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 3e-63; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 51 - 177
Target Start/End: Original strand, 26977426 - 26977552
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26977426 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccgcttcattgctaggactcatacctgaggataatttaa 26977525  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||||||||||||||||||||||||||    
T  26977526 aattcacaggaagtggggtagagattg 26977552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 51 - 177
Target Start/End: Original strand, 27875242 - 27875368
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27875242 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccgcttcattgctaggactcatacctgaggataatttaa 27875341  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||||||||||||||||||||||||||    
T  27875342 aattcacaggaagtggggtagagattg 27875368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 51 - 177
Target Start/End: Original strand, 1472997 - 1473123
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||| || |||||||||     
T  1472997 atggcatacataaggcttcccaccgctgatgcatagggtactcgagacatttccatcctctctgcttcattgctaggattcataccggaagataatttat 1473096  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||| | ||||||||||||||| ||||    
T  1473097 aattgataggaagtggggtagatattg 1473123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 177
Target Start/End: Complemental strand, 21965173 - 21965051
Alignment:
Q  55 catacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaaaatt 154  Q
    |||||||||||||||| |||||  ||  ||||| |||||||||||||| |||||||||  |||||||| |||||||||||||  ||||||||||||||||    
T  21965173 catacataaggcttccaaccgcgaatatatacgatactcgagacattttcatcctctcttcttcattgttaggactcataccgaaggataatttaaaatt 21965074  T
Q  155 cacaggaagtggggtagagattg 177  Q
    |||| ||||||||||||||||||    
T  21965073 cacaagaagtggggtagagattg 21965051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 51 - 177
Target Start/End: Complemental strand, 34355794 - 34355668
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34355794 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccgcttcattgctaggactcatacctgaggataatttaa 34355695  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||||||||||||||||||||||||||    
T  34355694 aattcacaggaagtggggtagagattg 34355668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 51 - 177
Target Start/End: Complemental strand, 41722194 - 41722068
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41722194 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccgcttcattgctaggactcatacctgaggataatttaa 41722095  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||||||||||||||||||||||||||    
T  41722094 aattcacaggaagtggggtagagattg 41722068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 3e-63; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 51 - 177
Target Start/End: Original strand, 30946716 - 30946842
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30946716 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccgcttcattgctaggactcatacctgaggataatttaa 30946815  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||||||||||||||||||||||||||    
T  30946816 aattcacaggaagtggggtagagattg 30946842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 51 - 177
Target Start/End: Complemental strand, 42269687 - 42269561
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42269687 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccgcttcattgctaggactcatacctgaggataatttaa 42269588  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||||||||||||||||||||||||||    
T  42269587 aattcacaggaagtggggtagagattg 42269561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 51 - 177
Target Start/End: Original strand, 48698354 - 48698480
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48698354 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccgcttcattgctaggactcatacctgaggataatttaa 48698453  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||||||||||||||||||||||||||    
T  48698454 aattcacaggaagtggggtagagattg 48698480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 51 - 177
Target Start/End: Complemental strand, 2002667 - 2002541
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||  ||||||||||||     
T  2002667 atggcatacataaggcttcccaccactgatgcatagggtactcgagacatttccatcctctctgcttcattgctaggattcatactggaggataatttat 2002568  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||| | ||||||||||||||| ||||    
T  2002567 aattgataggaagtggggtagatattg 2002541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 3e-63; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 51 - 177
Target Start/End: Original strand, 5819808 - 5819934
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5819808 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccgcttcattgctaggactcatacctgaggataatttaa 5819907  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||||||||||||||||||||||||||    
T  5819908 aattcacaggaagtggggtagagattg 5819934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 51 - 177
Target Start/End: Complemental strand, 54544929 - 54544803
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  54544929 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccgcttcattgctaggactcatacctgaggataatttaa 54544830  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||||||||||||||||||||||||||    
T  54544829 aattcacaggaagtggggtagagattg 54544803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 177
Target Start/End: Complemental strand, 42588732 - 42588606
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||||||||| ||||||||   ||||||||||||| ||||||  ||||||||||||     
T  42588732 atggcatacataaggcttcccaccactgatgcatagggtactcgagacatttctatcctctctgattcattgctaggattcatactggaggataatttat 42588633  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||| | ||||||||||||||| ||||    
T  42588632 aattgataggaagtggggtagatattg 42588606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 177
Target Start/End: Complemental strand, 25878079 - 25877957
Alignment:
Q  55 catacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaaaatt 154  Q
    |||||||||| |||||||| || |||||||| |||||| ||||||||| |||||||||| |||||||||||||| ||| || ||||||||||||| ||||    
T  25878079 catacataagacttcccactgctgatgcatagggtacttgagacattttcatcctctccgcttcattgctaggattcagacttgaggataatttataatt 25877980  T
Q  155 cacaggaagtggggtagagattg 177  Q
     | || || ||||||||| ||||    
T  25877979 gatagaaaatggggtagatattg 25877957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 25880439 - 25880379
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctct 111  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||    
T  25880439 atggcatacataaggcttcccaccgctgatgcataaggtactcgagacattttcatcctct 25880379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 25880627 - 25880583
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcga 95  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||    
T  25880627 atggcatacataaggtttcccaccgctgatgcataaggtactcga 25880583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 51 - 177
Target Start/End: Original strand, 28568 - 28694
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  28568 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccgcttcattgctaggactcatacatgaggataatttaa 28667  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||||||| ||||||||||||||||||    
T  28668 aattcacaagaagtggggtagagattg 28694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 2324622 - 2324740
Alignment:
Q  55 catacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaaaatt 154  Q
    |||||| ||||||||||||| || ||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||||    
T  2324622 catacaaaaggcttcccaccacctatgcatacggtactcgagatatttccatcctctctgcttcattactaggactcatacttgaggataatttaaaatt 2324721  T
Q  155 cacaggaagtggggtagag 173  Q
    || ||||||||||||||||    
T  2324722 caaaggaagtggggtagag 2324740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 51 - 177
Target Start/End: Original strand, 7506109 - 7506235
Alignment:
Q  51 atggcatacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaa 150  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||||  ||||||||||||     
T  7506109 atggcatacataaggcttcccaccgctgatgcatagggtactcgagacatttccatcctatctacttcattgctaggattcatactagaggataatttat 7506208  T
Q  151 aattcacaggaagtggggtagagattg 177  Q
    |||| | ||||||||||||||| ||||    
T  7506209 aattgataggaagtggggtagatattg 7506235  T

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Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 177
Target Start/End: Complemental strand, 34973314 - 34973192
Alignment:
Q  55 catacataaggcttcccaccgccgatgcatacggtactcgagacatttccatcctctccacttcattgctaggactcatacctgaggataatttaaaatt 154  Q
    ||||||||||||||| ||  ||||||||||||||||||| ||||||||| | ||| ||| |||||||| |||||||||||| |||||||||||||||| |    
T  34973314 catacataaggcttctcattgccgatgcatacggtactcaagacatttctaccctatccgcttcattgttaggactcatacatgaggataatttaaaact 34973215  T
Q  155 cacaggaagtggggtagagattg 177  Q
    ||| |||||| ||||||||||||    
T  34973214 cactggaagtagggtagagattg 34973192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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