View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0942_low_164 (Length: 209)

Name: NF0942_low_164
Description: NF0942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0942_low_164
NF0942_low_164
[»] chr2 (38 HSPs)
chr2 (15-191)||(2665790-2665966)
chr2 (33-116)||(44860319-44860404)
chr2 (48-112)||(34784961-34785027)
chr2 (35-116)||(2331795-2331876)
chr2 (35-116)||(22084805-22084890)
chr2 (34-84)||(21616762-21616812)
chr2 (37-83)||(36281688-36281734)
chr2 (33-117)||(4207856-4207941)
chr2 (35-84)||(30527604-30527653)
chr2 (48-84)||(20922937-20922973)
chr2 (52-116)||(35056886-35056952)
chr2 (34-84)||(23718026-23718076)
chr2 (34-84)||(24105698-24105748)
chr2 (34-84)||(31808077-31808127)
chr2 (34-100)||(36409620-36409686)
chr2 (34-84)||(37411253-37411303)
chr2 (34-108)||(19573978-19574048)
chr2 (35-88)||(28412351-28412404)
chr2 (34-83)||(28677909-28677958)
chr2 (35-80)||(31018591-31018636)
chr2 (35-84)||(35449514-35449563)
chr2 (35-84)||(39279676-39279725)
chr2 (48-84)||(20242736-20242772)
chr2 (42-94)||(21782817-21782869)
chr2 (55-116)||(28524447-28524510)
chr2 (47-116)||(38355862-38355933)
chr2 (42-114)||(12668400-12668474)
chr2 (37-80)||(23921256-23921299)
chr2 (48-116)||(36096350-36096420)
chr2 (42-84)||(5367200-5367242)
chr2 (34-84)||(16069263-16069313)
chr2 (34-84)||(18276521-18276571)
chr2 (42-117)||(30717504-30717581)
chr2 (39-81)||(35191591-35191633)
chr2 (42-107)||(17776595-17776662)
chr2 (42-95)||(18622614-18622669)
chr2 (34-78)||(30404865-30404909)
chr2 (41-81)||(40361766-40361806)
[»] scaffold0123 (1 HSPs)
scaffold0123 (33-116)||(44500-44585)
[»] chr3 (43 HSPs)
chr3 (34-84)||(32804549-32804599)
chr3 (34-116)||(25064909-25064991)
chr3 (34-100)||(16192741-16192809)
chr3 (43-115)||(15812799-15812871)
chr3 (42-122)||(11665952-11666034)
chr3 (37-84)||(49505163-49505210)
chr3 (35-106)||(8039820-8039893)
chr3 (42-84)||(11313809-11313851)
chr3 (33-140)||(34307737-34307840)
chr3 (42-116)||(4987266-4987342)
chr3 (42-116)||(14209121-14209197)
chr3 (34-116)||(15796269-15796353)
chr3 (34-116)||(55212963-55213046)
chr3 (42-112)||(2620034-2620104)
chr3 (35-81)||(4201397-4201443)
chr3 (34-84)||(7928450-7928500)
chr3 (35-80)||(14840304-14840349)
chr3 (42-79)||(27277852-27277889)
chr3 (34-78)||(10268501-10268545)
chr3 (42-90)||(11251986-11252034)
chr3 (45-94)||(15314873-15314924)
chr3 (41-84)||(2731819-2731862)
chr3 (34-81)||(7614427-7614474)
chr3 (34-81)||(8842330-8842376)
chr3 (34-81)||(10690274-10690321)
chr3 (37-84)||(38731221-38731268)
chr3 (33-100)||(1509538-1509607)
chr3 (34-80)||(8383257-8383303)
chr3 (34-84)||(25093502-25093552)
chr3 (42-97)||(25948881-25948938)
chr3 (39-77)||(28098143-28098181)
chr3 (42-84)||(48202278-48202320)
chr3 (33-82)||(9624640-9624689)
chr3 (39-84)||(11658820-11658865)
chr3 (42-83)||(12704015-12704056)
chr3 (40-106)||(16789018-16789086)
chr3 (42-100)||(28678311-28678371)
chr3 (73-117)||(2052767-2052811)
chr3 (44-84)||(8789559-8789599)
chr3 (42-82)||(11493372-11493412)
chr3 (42-107)||(21211296-21211357)
chr3 (48-84)||(35222952-35222988)
chr3 (42-78)||(55401083-55401119)
[»] chr7 (44 HSPs)
chr7 (34-112)||(32308120-32308200)
chr7 (34-106)||(29787356-29787428)
chr7 (34-97)||(1433454-1433519)
chr7 (33-100)||(8160415-8160484)
chr7 (34-82)||(27093424-27093472)
chr7 (34-82)||(27184829-27184877)
chr7 (37-84)||(17851434-17851481)
chr7 (34-84)||(2948683-2948733)
chr7 (42-97)||(16341504-16341561)
chr7 (34-118)||(49088810-49088892)
chr7 (42-96)||(7328686-7328742)
chr7 (42-112)||(15902830-15902902)
chr7 (34-96)||(22602705-22602769)
chr7 (34-116)||(26329357-26329441)
chr7 (40-84)||(5233635-5233679)
chr7 (42-115)||(6630888-6630963)
chr7 (48-84)||(18213042-18213078)
chr7 (32-84)||(27732248-27732300)
chr7 (33-108)||(11700802-11700877)
chr7 (42-114)||(24339650-24339724)
chr7 (42-84)||(3721101-3721143)
chr7 (34-84)||(20549791-20549841)
chr7 (34-100)||(30731037-30731103)
chr7 (34-84)||(33384591-33384641)
chr7 (36-84)||(2425742-2425790)
chr7 (32-84)||(42720899-42720951)
chr7 (34-81)||(5235986-5236033)
chr7 (45-97)||(17307904-17307958)
chr7 (41-84)||(38143230-38143273)
chr7 (34-84)||(5548676-5548726)
chr7 (41-100)||(9408325-9408386)
chr7 (42-84)||(12278843-12278885)
chr7 (34-84)||(19206050-19206100)
chr7 (34-84)||(22484025-22484075)
chr7 (42-84)||(22868050-22868092)
chr7 (42-84)||(24146824-24146866)
chr7 (42-79)||(2424622-2424659)
chr7 (34-83)||(23191896-23191945)
chr7 (44-81)||(35493423-35493460)
chr7 (48-81)||(39138458-39138491)
chr7 (44-84)||(9482944-9482984)
chr7 (34-82)||(10377507-10377555)
chr7 (41-94)||(35297669-35297724)
chr7 (54-82)||(41020516-41020544)
[»] chr5 (43 HSPs)
chr5 (34-116)||(3966503-3966587)
chr5 (34-116)||(18592073-18592157)
chr5 (34-116)||(11685939-11686022)
chr5 (48-116)||(21814275-21814345)
chr5 (34-84)||(27144463-27144513)
chr5 (35-94)||(36838544-36838605)
chr5 (42-116)||(21522758-21522834)
chr5 (42-116)||(21533324-21533400)
chr5 (33-94)||(6471886-6471949)
chr5 (33-85)||(24273038-24273090)
chr5 (33-85)||(24389124-24389176)
chr5 (42-82)||(35017045-35017085)
chr5 (48-116)||(6401512-6401582)
chr5 (34-84)||(7175028-7175078)
chr5 (42-84)||(16203804-16203846)
chr5 (34-80)||(28588687-28588733)
chr5 (37-116)||(30098329-30098410)
chr5 (34-83)||(2577190-2577239)
chr5 (35-84)||(30502397-30502446)
chr5 (35-84)||(30542740-30542789)
chr5 (44-84)||(14873527-14873567)
chr5 (42-107)||(19579709-19579776)
chr5 (48-84)||(39758286-39758322)
chr5 (42-81)||(12927662-12927701)
chr5 (40-100)||(19429438-19429500)
chr5 (33-80)||(23016002-23016049)
chr5 (37-100)||(5467975-5468034)
chr5 (42-84)||(23012417-23012459)
chr5 (34-84)||(23220983-23221033)
chr5 (39-81)||(28262408-28262450)
chr5 (42-84)||(41091266-41091308)
chr5 (42-116)||(3751905-3751981)
chr5 (32-81)||(17593734-17593783)
chr5 (42-116)||(21542038-21542114)
chr5 (42-100)||(22423803-22423863)
chr5 (34-100)||(32766934-32767002)
chr5 (33-107)||(39698540-39698616)
chr5 (42-78)||(14674277-14674313)
chr5 (44-84)||(18421850-18421890)
chr5 (42-78)||(33178033-33178069)
chr5 (54-107)||(37328828-37328883)
chr5 (42-95)||(39205888-39205943)
chr5 (42-107)||(43554529-43554590)
[»] chr6 (55 HSPs)
chr6 (15-78)||(25038086-25038148)
chr6 (34-84)||(5732519-5732569)
chr6 (34-112)||(5970087-5970167)
chr6 (42-116)||(16766705-16766781)
chr6 (35-91)||(31579227-31579283)
chr6 (48-116)||(16488565-16488635)
chr6 (42-84)||(7086803-7086845)
chr6 (34-84)||(19040352-19040402)
chr6 (42-116)||(7248366-7248442)
chr6 (35-84)||(7265602-7265651)
chr6 (42-95)||(8805570-8805623)
chr6 (42-100)||(9195745-9195805)
chr6 (33-81)||(5462685-5462733)
chr6 (42-95)||(9025490-9025545)
chr6 (34-81)||(9658879-9658926)
chr6 (33-80)||(32511679-32511726)
chr6 (34-112)||(8713979-8714060)
chr6 (34-84)||(10842532-10842582)
chr6 (34-84)||(10888983-10889033)
chr6 (42-84)||(17302355-17302397)
chr6 (34-80)||(17341677-17341723)
chr6 (35-100)||(1532241-1532305)
chr6 (37-107)||(9617437-9617509)
chr6 (46-100)||(26562701-26562757)
chr6 (35-84)||(30866153-30866202)
chr6 (35-84)||(32298616-32298665)
chr6 (42-100)||(34073338-34073398)
chr6 (35-92)||(34447359-34447416)
chr6 (34-95)||(9027178-9027241)
chr6 (34-142)||(9629383-9629493)
chr6 (42-110)||(9107351-9107421)
chr6 (48-100)||(18367850-18367904)
chr6 (35-107)||(21395292-21395365)
chr6 (42-84)||(7151420-7151462)
chr6 (34-84)||(7377979-7378029)
chr6 (46-84)||(11591879-11591917)
chr6 (45-83)||(13360382-13360420)
chr6 (34-84)||(13851736-13851786)
chr6 (42-84)||(24832596-24832638)
chr6 (42-84)||(26178690-26178732)
chr6 (39-81)||(32248937-32248979)
chr6 (33-83)||(32320679-32320729)
chr6 (42-100)||(34290070-34290128)
chr6 (42-116)||(34868761-34868838)
chr6 (42-83)||(24833243-24833284)
chr6 (34-82)||(677837-677885)
chr6 (42-82)||(7996389-7996429)
chr6 (42-82)||(8022372-8022412)
chr6 (32-84)||(14721239-14721291)
chr6 (42-107)||(17168453-17168514)
chr6 (52-84)||(17327664-17327696)
chr6 (42-78)||(17841604-17841640)
chr6 (34-95)||(19147842-19147905)
chr6 (32-84)||(21885790-21885842)
chr6 (42-78)||(25096431-25096467)
[»] chr1 (69 HSPs)
chr1 (44-112)||(44482240-44482310)
chr1 (34-84)||(39953155-39953205)
chr1 (42-116)||(12713302-12713378)
chr1 (42-116)||(12717393-12717469)
chr1 (34-81)||(34257922-34257969)
chr1 (34-84)||(1864889-1864939)
chr1 (31-94)||(25272479-25272544)
chr1 (44-107)||(25361896-25361961)
chr1 (33-116)||(34371713-34371797)
chr1 (42-83)||(14332652-14332693)
chr1 (42-116)||(16164290-16164366)
chr1 (35-104)||(6427351-6427422)
chr1 (34-111)||(17754311-17754390)
chr1 (41-84)||(39130776-39130819)
chr1 (34-84)||(2784556-2784606)
chr1 (42-84)||(7918220-7918262)
chr1 (34-84)||(13997883-13997933)
chr1 (34-84)||(25098564-25098614)
chr1 (34-116)||(26238091-26238171)
chr1 (37-116)||(27471541-27471622)
chr1 (42-84)||(34712392-34712434)
chr1 (34-80)||(36878461-36878507)
chr1 (42-116)||(9828052-9828128)
chr1 (42-116)||(12707848-12707924)
chr1 (42-83)||(40181879-40181920)
chr1 (42-112)||(47989505-47989577)
chr1 (44-84)||(19324572-19324612)
chr1 (34-95)||(20157346-20157409)
chr1 (51-116)||(25934633-25934700)
chr1 (48-84)||(30749854-30749890)
chr1 (48-84)||(30771305-30771341)
chr1 (34-78)||(41877485-41877529)
chr1 (18-81)||(48148049-48148112)
chr1 (33-97)||(1486703-1486769)
chr1 (34-98)||(38503320-38503386)
chr1 (37-84)||(52903252-52903299)
chr1 (34-80)||(398778-398824)
chr1 (42-84)||(10233261-10233303)
chr1 (42-84)||(12443469-12443511)
chr1 (42-84)||(13436466-13436508)
chr1 (34-84)||(17425102-17425152)
chr1 (34-84)||(17831540-17831590)
chr1 (34-80)||(21530689-21530735)
chr1 (35-81)||(28674801-28674847)
chr1 (34-84)||(32724107-32724157)
chr1 (42-80)||(34298444-34298482)
chr1 (42-84)||(35999331-35999373)
chr1 (34-97)||(44296489-44296553)
chr1 (42-91)||(2288169-2288218)
chr1 (54-112)||(5944303-5944363)
chr1 (34-112)||(9629879-9629959)
chr1 (35-84)||(9709821-9709870)
chr1 (40-77)||(15323169-15323206)
chr1 (42-95)||(15641028-15641081)
chr1 (44-81)||(20131987-20132024)
chr1 (37-107)||(21038086-21038158)
chr1 (54-112)||(31694689-31694749)
chr1 (42-116)||(32461439-32461514)
chr1 (35-84)||(36905998-36906047)
chr1 (48-81)||(45534202-45534235)
chr1 (34-74)||(2896140-2896180)
chr1 (34-82)||(5898277-5898325)
chr1 (42-78)||(22515902-22515938)
chr1 (42-78)||(22881631-22881667)
chr1 (42-90)||(25452151-25452199)
chr1 (33-84)||(29229460-29229512)
chr1 (42-78)||(31015051-31015087)
chr1 (42-78)||(37055871-37055907)
chr1 (42-107)||(42004937-42004998)
[»] chr8 (39 HSPs)
chr8 (33-104)||(11803258-11803331)
chr8 (34-84)||(39954288-39954338)
chr8 (34-84)||(4786347-4786397)
chr8 (42-84)||(14731720-14731762)
chr8 (42-113)||(15816107-15816180)
chr8 (34-84)||(34897085-34897135)
chr8 (42-116)||(2572031-2572107)
chr8 (34-100)||(11927077-11927145)
chr8 (40-84)||(33405393-33405437)
chr8 (42-84)||(13844605-13844647)
chr8 (34-84)||(24362211-24362261)
chr8 (34-83)||(4611534-4611583)
chr8 (37-82)||(13018284-13018329)
chr8 (35-84)||(20785474-20785523)
chr8 (32-84)||(12570517-12570569)
chr8 (51-116)||(26902150-26902217)
chr8 (40-80)||(31580140-31580180)
chr8 (34-94)||(11944665-11944727)
chr8 (42-81)||(14134707-14134746)
chr8 (42-80)||(3025559-3025597)
chr8 (22-84)||(7472524-7472586)
chr8 (39-81)||(24447034-24447076)
chr8 (42-84)||(27213555-27213597)
chr8 (57-100)||(29447467-29447512)
chr8 (42-84)||(31236586-31236628)
chr8 (42-84)||(34222955-34222997)
chr8 (32-81)||(12570746-12570795)
chr8 (33-78)||(24669432-24669477)
chr8 (44-81)||(26529751-26529788)
chr8 (42-111)||(29776044-29776113)
chr8 (35-84)||(33382028-33382077)
chr8 (36-89)||(37283814-37283867)
chr8 (34-78)||(4298901-4298945)
chr8 (42-78)||(8342980-8343016)
chr8 (42-78)||(8343324-8343360)
chr8 (33-73)||(18067954-18067994)
chr8 (48-84)||(18964191-18964227)
chr8 (16-80)||(20679408-20679471)
chr8 (42-78)||(20873077-20873113)
[»] chr4 (40 HSPs)
chr4 (34-84)||(22440609-22440659)
chr4 (36-116)||(903924-904006)
chr4 (34-84)||(5775367-5775417)
chr4 (44-114)||(13134460-13134532)
chr4 (34-100)||(40742591-40742659)
chr4 (34-81)||(21539879-21539926)
chr4 (36-116)||(30982853-30982935)
chr4 (34-114)||(38148702-38148784)
chr4 (48-116)||(46083966-46084036)
chr4 (34-80)||(8423731-8423777)
chr4 (34-84)||(11931280-11931330)
chr4 (54-113)||(19500836-19500897)
chr4 (42-84)||(36635332-36635374)
chr4 (34-84)||(40613450-40613500)
chr4 (42-96)||(49652969-49653023)
chr4 (54-116)||(22234865-22234929)
chr4 (42-82)||(7214533-7214573)
chr4 (52-84)||(10499279-10499311)
chr4 (48-116)||(5414147-5414217)
chr4 (45-84)||(17876166-17876205)
chr4 (48-116)||(44132619-44132689)
chr4 (42-84)||(999357-999399)
chr4 (39-81)||(3731208-3731250)
chr4 (42-97)||(15659754-15659811)
chr4 (42-76)||(17446079-17446113)
chr4 (42-84)||(33950144-33950186)
chr4 (32-82)||(40179647-40179697)
chr4 (34-84)||(48139264-48139314)
chr4 (15-92)||(2234232-2234308)
chr4 (33-106)||(4099960-4100038)
chr4 (41-78)||(6485626-6485663)
chr4 (35-84)||(16189710-16189759)
chr4 (47-84)||(17344513-17344550)
chr4 (42-116)||(19482676-19482752)
chr4 (42-100)||(24343515-24343569)
chr4 (41-78)||(27706192-27706229)
chr4 (39-84)||(44081586-44081631)
chr4 (42-95)||(56257941-56257994)
chr4 (43-83)||(9996849-9996889)
chr4 (44-84)||(18576046-18576086)
[»] scaffold0236 (1 HSPs)
scaffold0236 (32-94)||(25765-25829)
[»] scaffold1528 (1 HSPs)
scaffold1528 (34-111)||(1035-1114)
[»] scaffold0044 (1 HSPs)
scaffold0044 (43-116)||(53189-53264)
[»] scaffold0022 (2 HSPs)
scaffold0022 (34-95)||(99893-99956)
scaffold0022 (35-81)||(90844-90890)
[»] scaffold0008 (1 HSPs)
scaffold0008 (42-122)||(263341-263423)
[»] scaffold0110 (1 HSPs)
scaffold0110 (34-84)||(28850-28900)
[»] scaffold0024 (1 HSPs)
scaffold0024 (36-111)||(68222-68299)
[»] scaffold0036 (1 HSPs)
scaffold0036 (42-100)||(9738-9798)
[»] scaffold0003 (1 HSPs)
scaffold0003 (54-116)||(241614-241678)
[»] scaffold0020 (1 HSPs)
scaffold0020 (42-95)||(135308-135363)
[»] scaffold0623 (1 HSPs)
scaffold0623 (48-116)||(5971-6041)
[»] scaffold0697 (1 HSPs)
scaffold0697 (34-80)||(1644-1690)
[»] scaffold0168 (1 HSPs)
scaffold0168 (33-100)||(21042-21111)
[»] scaffold0279 (1 HSPs)
scaffold0279 (70-116)||(17855-17903)
[»] scaffold0136 (1 HSPs)
scaffold0136 (34-112)||(3828-3908)
[»] scaffold0027 (1 HSPs)
scaffold0027 (34-78)||(46682-46726)
[»] scaffold0019 (1 HSPs)
scaffold0019 (54-116)||(71745-71809)
[»] scaffold0018 (1 HSPs)
scaffold0018 (34-78)||(192264-192308)
[»] scaffold0011 (1 HSPs)
scaffold0011 (42-78)||(17764-17800)


Alignment Details
Target: chr2 (Bit Score: 137; Significance: 1e-71; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 2665966 - 2665790
Alignment:
Q  15 cacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgttggacacaacacgt 114  Q
    |||||||| |||||||| | |||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  2665966 cacagatagtgacatgtctaacaccactaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttgaacacaacacgt 2665867  T
Q  115 gtttgataatgatgcacgtctaatccgaaaagtgccgtacttggtagttatcgacatacaatgattattataaaact 191  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||    
T  2665866 gtttgataatgatgcacgtctaatccgaaaagtgtcgtacttcgtagttatcgacgtacaatgattattataaaact 2665790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 44860319 - 44860404
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    |||||||| ||||||||| |||||||| ||||||| ||||||||||||||||  |||||||||| |||||||||||| ||| ||||    
T  44860319 tgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgt 44860404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 34785027 - 34784961
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacac 112  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||| | |||||| ||||    
T  34785027 ttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacac 34784961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 2331795 - 2331876
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||| |||||||||| |||||||||||||||| |||||| |||| ||| ||||||||||| |||| || |||| |||||||    
T  2331795 acaccattaataatttgagaaaatcacataattcagtgtatttatgtgtcggtgtcgtgtcagtgtcgggcacagcacgtgt 2331876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 22084890 - 22084805
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaa--ttatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    |||||||||||||||| ||||||||| |||||| |||||||  |||||||||  ||| ||||||| |||| |||||||||||||||    
T  22084890 acaccgttaataatttgagaaaatcatataattcagtgtaattttatatgtgccggtatcgtgtcagtgtcggacacaacacgtgt 22084805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 21616762 - 21616812
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  21616762 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 21616812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 36281688 - 36281734
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  36281688 accgttaataatttgagaaaatcacataatttagtgtaatcatatgt 36281734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 4207856 - 4207941
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattata-tgtgggtgtcgtgtcggtgttggacacaacacgtgtt 117  Q
    |||||||  ||||||||| | |||| | |||||||||||||||||||| ||| ||| |||||||||||| |||||| |||||||||    
T  4207856 tgacaccactaataatttgaaaaaagcgcataatttagtgtaattatattgtcggtatcgtgtcggtgtcggacacgacacgtgtt 4207941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 30527653 - 30527604
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  30527653 acactgttaataatttgagaaaatcatataatttagtgtaattatatgtg 30527604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 20922973 - 20922937
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||||||||||||||||||||    
T  20922973 ttttagaaaatcacataatttagtgtaattatatgtg 20922937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 35056886 - 35056952
Alignment:
Q  52 agaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    |||||| || |||||| ||||||||||||||||  |||||||||||||||| |||||| ||||||||    
T  35056886 agaaaaccatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 35056952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 23718026 - 23718076
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| ||||| |||||||||| ||||||||||||||||    
T  23718026 gacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 23718076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 24105698 - 24105748
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| ||||| |||||||||| ||||||||||||||||    
T  24105698 gacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 24105748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 31808077 - 31808127
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| | |||||||||||||| ||||||||||||||||    
T  31808077 gacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtg 31808127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 36409686 - 36409620
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgt 100  Q
    ||||||| | ||||||| | |||||||||||||||||||||||||| ||| |||||| ||| |||||    
T  36409686 gacaccgctgataatttgaaaaaatcacataatttagtgtaattatgtgtcggtgtcatgttggtgt 36409620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 37411303 - 37411253
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||||||||| ||||| ||||||||||    
T  37411303 gacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtg 37411253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 19573978 - 19574048
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgttggacaca 108  Q
    ||||||| ||||||||| ||||||| |||||||| ||||||||||||    |||| ||||||||||| |||||||    
T  19573978 gacaccgataataatttaagaaaataacataattcagtgtaattata----ggtggcgtgtcggtgtcggacaca 19574048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 28412351 - 28412404
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtg 88  Q
    |||||||||||||||| | |||||||||||||| ||||||||||| ||| ||||    
T  28412351 acaccgttaataatttgataaaatcacataattcagtgtaattatgtgtcggtg 28412404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 28677909 - 28677958
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    ||||||| ||||||||| | |||||||||||||| |||||||||||||||    
T  28677909 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 31018591 - 31018636
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    |||||| ||||||||| |||||||||||| ||||||||||||||||    
T  31018591 acaccgctaataatttcagaaaatcacatgatttagtgtaattata 31018636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 35449514 - 35449563
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| ||||||||||| ||||||||||| |||| ||||||||||||||||    
T  35449514 acactgttaataatttgagaaaatcacagaattcagtgtaattatatgtg 35449563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 39279676 - 39279725
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||| | ||||||||| |||||| ||||||||||||||||    
T  39279676 acaccgttaataatatgagaaaatcaaataattcagtgtaattatatgtg 39279725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 20242772 - 20242736
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||| ||||||||||||||||    
T  20242772 ttttagaaaatcacataattcagtgtaattatatgtg 20242736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 21782869 - 21782817
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgt 94  Q
    ||||||||| |||||||||||||||| ||||||||||| ||  ||||||||||    
T  21782869 taataatttgagaaaatcacataattcagtgtaattatgtgccggtgtcgtgt 21782817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 28524447 - 28524510
Alignment:
Q  55 aaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||||| ||||||||||||||||  | ||| |||| ||||| |||||||||||||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacacaacacgtgt 28524510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 38355933 - 38355862
Alignment:
Q  47 attttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    |||| |||||||||||||||| ||||| ||||||||||  |||||| | | ||||||||| |||||||||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggatacaacacgtgt 38355862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 12668474 - 12668400
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacgt 114  Q
    ||||||||| | ||||| |||||||| ||||||||||||  ||| |||||||||||||| ||||| || ||||||    
T  12668474 taataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtcggtattggatacgacacgt 12668400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 23921256 - 23921299
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    |||||||||||||| ||||||| |||||||| ||||||||||||    
T  23921256 accgttaataatttgagaaaattacataattcagtgtaattata 23921299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 36096420 - 36096350
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||||||| |||  ||||||||||||  ||| |||||||||||| ||| |||||| ||||||||    
T  36096420 ttttagaaaatcacaaaatgcagtgtaattatatttgtcggtgtcgtgtcgatgtcggacacgacacgtgt 36096350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 5367200 - 5367242
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtg 5367242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 16069313 - 16069263
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||||| | ||||||| |||||| ||||||||||| ||||    
T  16069313 gacaccgttaataatttaaaaaaatcatataattcagtgtaattatttgtg 16069263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 18276521 - 18276571
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||| ||||| ||||||||||| ||||    
T  18276521 gacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtg 18276571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 30717581 - 30717504
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacgtgtt 117  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| | |||||||||| ||| |||||| |||||||||    
T  30717581 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacgtgtt 30717504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 35191633 - 35191591
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  35191633 cgttgataatttgagaaaatcacataatttagggtaattatat 35191591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 17776595 - 17776662
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacac 107  Q
    ||||||||| |||||| ||||||| | ||||||||||||||||   |||||  |||||||||||||||    
T  17776595 taataatttaagaaaaccacataagtcagtgtaattatatgtgtcagtgtcaagtcggtgttggacac 17776662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 18622614 - 18622669
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtc 95  Q
    ||||||||| | |||||||||||||| ||||||||||||  ||| |||||||||||    
T  18622614 taataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgtc 18622669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 30404909 - 30404865
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  30404909 gacacggttaataatttgaaaaaatcacataattcagtgtaatta 30404865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 40361806 - 40361766
Alignment:
Q  41 ttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||||||||| | ||||| ||||||||||||||||||||||    
T  40361806 ttaataatttgaaaaaattacataatttagtgtaattatat 40361766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 44585 - 44500
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  44585 tgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgt 44500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 5e-18; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 32804599 - 32804549
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32804599 gacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtg 32804549  T

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Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 25064909 - 25064991
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||| |||| |||| | |||||||||||||||||||||||||| ||| ||| |||||| ||||| |||||| ||||||||    
T  25064909 gacaccgctaatgatttgaaaaaatcacataatttagtgtaattatgtgttggtatcgtgttggtgtcggacacgacacgtgt 25064991  T

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Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 16192809 - 16192741
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgt 100  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||||||||||  | ||||||||||||||    
T  16192809 gacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcggtgt 16192741  T

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Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 15812871 - 15812799
Alignment:
Q  43 aataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgttggacacaacacgtg 115  Q
    |||||||| |||||||||||||| | ||||||||||||||  |||||||||| ||||| |||||| |||||||    
T  15812871 aataatttgagaaaatcacataactcagtgtaattatatgccggtgtcgtgttggtgtcggacacgacacgtg 15812799  T

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Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 11665952 - 11666034
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgtttgata 122  Q
    ||||||||| | ||||||||| |||||||||||||||||||||  |||||||||| | |||| ||||| |||||||| |||||    
T  11665952 taataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctgata 11666034  T

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Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 49505210 - 49505163
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  49505210 accgctaataatttgagaaaatcacataatttagtgtaattatatgtg 49505163  T

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Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 8039893 - 8039820
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggaca 106  Q
    |||||| ||||||||| ||||||| | |||||| ||||||||||||||||  |||||||||||||||| |||||    
T  8039893 acaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 8039820  T

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Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 11313851 - 11313809
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  11313851 taataatttgagaaaatcacataatttagtgtaattatatgtg 11313809  T

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Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 34307840 - 34307737
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgttggacacaacacgtgtttgataatgatgcacg 132  Q
    |||||||| ||||||||| ||||||||||||| || ||||||||||||     ||||||||||||||| |||||| |||||| || |||| |||  ||||    
T  34307840 tgacaccgctaataatttgagaaaatcacatatttcagtgtaattata----agtgtcgtgtcggtgtcggacacgacacgtcttcgatactgagacacg 34307745  T
Q  133 tctaatcc 140  Q
     |||||||    
T  34307744 cctaatcc 34307737  T

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Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 4987342 - 4987266
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| |||| |||||||||||||||||| ||||||||    
T  4987342 taataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgt 4987266  T

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Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 14209121 - 14209197
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||| |||||||||||||| |||||||||| |  |||  ||||||||||||||| |||||| ||||||||    
T  14209121 taataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgt 14209197  T

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Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 15796353 - 15796269
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||| ||||||||||| | ||||||| |||||| |||||||||| |  ||| |||||||||| ||||| |||||||||||||||    
T  15796353 gacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgt 15796269  T

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Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 55212963 - 55213046
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||| |  ||| ||||| |||||||||| || ||||||||||||    
T  55212963 gacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcggtgt-gtgtcggtgtcgggcacaacacgtgt 55213046  T

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Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 2620104 - 2620034
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgttggacacaacac 112  Q
    |||| |||| |||||||||||||||| ||||||| ||| ||| ||||||||| ||||||| ||||| ||||    
T  2620104 taatcatttgagaaaatcacataattaagtgtaactatgtgttggtgtcgtggcggtgttagacacgacac 2620034  T

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Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 4201397 - 4201443
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||    
T  4201397 acaccgttaataatttgaaaaaatcacataattaagtgtaattatat 4201443  T

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Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 7928450 - 7928500
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| | |||||||||||||| ||||||||||||||||    
T  7928450 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtg 7928500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 14840349 - 14840304
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||||    
T  14840349 acaccattaataatttcagaaaatcacataattcagtgtaattata 14840304  T

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Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 27277889 - 27277852
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattat 79  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  27277889 taataatttgagaaaatcacataatttagtgtaattat 27277852  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 10268545 - 10268501
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||| ||||||||||| | |||||||||||||||||||||||||    
T  10268545 gacacagttaataatttgaaaaaatcacataatttagtgtaatta 10268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 11251986 - 11252034
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtc 90  Q
    ||||||||| |||||||||||||||| ||||||||||| ||| ||||||    
T  11251986 taataatttgagaaaatcacataattcagtgtaattatgtgtcggtgtc 11252034  T

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Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 15314924 - 15314873
Alignment:
Q  45 taattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgt 94  Q
    |||||| | |||||||||||||||||||||||||||||||  ||||||||||    
T  15314924 taatttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcgtgt 15314873  T

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Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 2731819 - 2731862
Alignment:
Q  41 ttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||    
T  2731819 ttaatactttaagaaaatcacataattaagtgtaattatatgtg 2731862  T

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Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 7614474 - 7614427
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||| ||||||||||| |||||||||||||||| ||| |||||||||    
T  7614474 gacacagttaataatttaagaaaatcacataattcagtataattatat 7614427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 8842330 - 8842376
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  8842330 gacaccgctaataatttt-gaaaatcacataatttggtgtaattatat 8842376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 10690321 - 10690274
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||| ||||||| | |||||||||||||||| |||||||||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaattatat 10690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 38731221 - 38731268
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| ||||||||||| |||||||||||||| |||||| |||||||||    
T  38731221 accgctaataattttaaaaaatcacataattcagtgtagttatatgtg 38731268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 1509538 - 1509607
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgt 100  Q
    |||||| | ||||||||| | ||||||||||||||||||||||||| |  ||| |||||||| |||||||    
T  1509538 tgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtttcggtgt 1509607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 8383257 - 8383303
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  8383257 gacaccgctaataatttgagaaaatcatataattcagtgtaattata 8383303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 25093502 - 25093552
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||| |||||| |||| ||||||||||| |||| ||||||||||||||||    
T  25093502 gacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtg 25093552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 25948938 - 25948881
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcgg 97  Q
    ||||||||| | |||||||||||||| ||||||||||||  ||| |||||||||||||    
T  25948938 taataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcgg 25948881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 28098143 - 28098181
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaatt 77  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  28098143 cgttgataattttagaaaatcacataatttagggtaatt 28098181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 48202320 - 48202278
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||    
T  48202320 taatagtttgagaaaatcacataatttaatgtaattatatgtg 48202278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 9624640 - 9624689
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    |||||| | ||||||||| |||||||||||||||| | ||||||||||||    
T  9624640 tgacactgctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 11658820 - 11658865
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||| |||||||| ||||||| ||||| ||||||||||    
T  11658820 cgttaataatttgagaaaatcgcataattcagtgtgattatatgtg 11658865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 12704015 - 12704056
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    ||||||||| |||||| ||||||||| |||||||||||||||    
T  12704015 taataatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 16789018 - 16789086
Alignment:
Q  40 gttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggaca 106  Q
    ||||||||||| | ||||||| |||||| ||||||||||||  ||| ||||||||||| |||| |||||    
T  16789018 gttaataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggaca 16789086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 28678311 - 28678371
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgt 100  Q
    ||||||||| | |||||||||||||||||| ||||| ||||||  |||||||||| |||||    
T  28678311 taataatttaataaaatcacataatttagtataattgtatgtgtcggtgtcgtgttggtgt 28678371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 2052767 - 2052811
Alignment:
Q  73 taattatatgtgggtgtcgtgtcggtgttggacacaacacgtgtt 117  Q
    |||||| ||||  ||||||||||||||||||||||||||| ||||    
T  2052767 taattaaatgtatgtgtcgtgtcggtgttggacacaacacttgtt 2052811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 8789599 - 8789559
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||||||||||  |||||||||||||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtg 8789559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 11493412 - 11493372
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||| | |||||||||||||||| ||||||||||||||    
T  11493412 taataatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 21211296 - 21211357
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgttggacac 107  Q
    ||||||||| ||||||| ||||| || ||||||||||    ||||||||||||||||||| |||||    
T  21211296 taataatttgagaaaattacatagttcagtgtaatta----tgggtgtcgtgtcggtgttcgacac 21211357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 35222952 - 35222988
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||| | ||||||||||||||    
T  35222952 ttttagaaaatcacataattcaatgtaattatatgtg 35222988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 55401083 - 55401119
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  55401083 taataatttgaaaaaatcacataatttagtgtaatta 55401119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 32308120 - 32308200
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacac 112  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||| ||||||   |||||||||||||||||||||| ||||    
T  32308120 gacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacac 32308200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 29787428 - 29787356
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgttggaca 106  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||| ||| |||||  |||||||||||||||    
T  29787428 gacaccgctaataatttgagaaaatcacataattcagtgtaattatgtgttggtgtaatgtcggtgttggaca 29787356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 1433454 - 1433519
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcgg 97  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||||||  |||||||||||||    
T  1433454 gacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgtcgg 1433519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 8160415 - 8160484
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgt 100  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||||||||||  ||| ||||||||||||    
T  8160415 tgacaccgctaataatttaagaaaattacataatttagtgtaattatatgtgttggtatcgtgtcggtgt 8160484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 27093472 - 27093424
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27093472 gacaccgctaataatttaagaaaatcacataatttagtgtaattatatg 27093424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 27184829 - 27184877
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27184829 gacaccgctaataatttaagaaaatcacataatttagtgtaattatatg 27184877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 17851434 - 17851481
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  17851434 accgctaataattttagaaaatcacataattcagtgtaattatatgtg 17851481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 2948683 - 2948733
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||    
T  2948683 gacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtg 2948733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 16341504 - 16341561
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcgg 97  Q
    ||||||||| |||||||||||||||| ||||||||||||||||  |||||||||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtgccggtgtcgtgtcgg 16341561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 49088810 - 49088892
Alignment:
Q  34 gacaccgttaataattttagaaaatcac--ataatttagtgtaattatatgtgggtgtcgtgtcggtgttggacacaacacgtgttt 118  Q
    ||||||||||||||||| | ||||||||  |||||||||| ||||||||||||    |||||| ||||||| |||||||||||||||    
T  49088810 gacaccgttaataatttaaaaaaatcacgtataatttagtataattatatgtg----tcgtgttggtgttgaacacaacacgtgttt 49088892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 7328742 - 7328686
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcg 96  Q
    ||||||||| ||||||| |||||||||||||||||||||||||  ||||||||||||    
T  7328742 taataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgtcg 7328686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 15902830 - 15902902
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacac 112  Q
    ||||||||| | |||||||||||||||||||||||||||||||  ||||| |||||||| | |||||| ||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacacgacac 15902902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 22602769 - 22602705
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcg 96  Q
    |||||||| ||| |||| |||||||||||||||| ||||||||||||||||  ||||||||||||    
T  22602769 gacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcg 22602705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 26329441 - 26329357
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    |||| |||||||||||| |||||| |||| |||| ||||||||||||||||  || |||||||||||||  ||||| ||||||||    
T  26329441 gacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacgacacgtgt 26329357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 5233635 - 5233679
Alignment:
Q  40 gttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||    
T  5233635 gttaataatttgagaaaatcacataatctagtgtaattatatgtg 5233679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 6630963 - 6630888
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtg 115  Q
    ||||||||| ||||| |||| ||||| ||||||||||||||||  | |||||||| ||||| ||||||||||||||    
T  6630963 taataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtg 6630888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 18213078 - 18213042
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||||||||||||||||||||    
T  18213078 ttttagaaaatcacataatttagtgtaattatatgtg 18213042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 27732300 - 27732248
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| |||||||||||| ||||||| |||||||| ||||||||||||||||    
T  27732300 ttgacaacgttaataatttaagaaaattacataattcagtgtaattatatgtg 27732248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 11700802 - 11700877
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgttggacaca 108  Q
    |||||||||||||||||| | |||||||||||||| | ||||||||| |||  |||| || ||||||| |||||||    
T  11700802 tgacaccgttaataatttgacaaaatcacataattcaatgtaattatgtgtctgtgttgtctcggtgtcggacaca 11700877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 24339650 - 24339724
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacgt 114  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| |||||||||||||||| |||||| ||||||    
T  24339650 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgt 24339724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 3721101 - 3721143
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||||||| ||||||||||||    
T  3721101 taataatttgagaaaatcacataatttagtataattatatgtg 3721143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 20549791 - 20549841
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||| ||||| ||||||||||||||||    
T  20549791 gacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtg 20549841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 30731037 - 30731103
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgt 100  Q
    |||||||  |||||||| |||||||||||||||| ||||||||| | ||| |||||||||| |||||    
T  30731037 gacaccgcgaataatttgagaaaatcacataattcagtgtaattgtgtgtcggtgtcgtgttggtgt 30731103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 33384641 - 33384591
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||| | ||||||||  |||||||||||||||||||||||    
T  33384641 gacaccgttaataatctgagaaaatcctataatttagtgtaattatatgtg 33384591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 2425790 - 2425742
Alignment:
Q  36 caccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||| |||||||||||||||| |||| || ||||||||    
T  2425790 caccgttaataatttgagaaaatcacataattaagtggaactatatgtg 2425742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 42720951 - 42720899
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||||| | |||||||||||||| | ||||||||||||||    
T  42720951 ttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtg 42720899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 5235986 - 5236033
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||| ||||||||| ||||||| | ||||||||||||||||||||    
T  5235986 gacaccgctaataatttaagaaaattatataatttagtgtaattatat 5236033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 17307904 - 17307958
Alignment:
Q  45 taattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcgg 97  Q
    |||||| ||||||| |||||||| ||||||||||||||||  |||||||||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgttggtgtcgtgtcgg 17307958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 38143230 - 38143273
Alignment:
Q  41 ttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||| | |||||||||||||||| ||||||||||||||    
T  38143230 ttaataatttgaaaaaatcacataatttaatgtaattatatgtg 38143273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 5548676 - 5548726
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| | ||||||| ||||||||| |||||| ||||||||||||||||    
T  5548676 gacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtg 5548726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 9408386 - 9408325
Alignment:
Q  41 ttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgt 100  Q
    |||||||||| | ||||||||||||||||||||||||| |  ||| |||||||| |||||||    
T  9408386 ttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgt 9408325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 12278843 - 12278885
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||    
T  12278843 taataatttaagaaaatgacataattcagtgtaattatatgtg 12278885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 19206050 - 19206100
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||||||||| | | ||||||||||||    
T  19206050 gacaccgctaataatttgagaaaatcacataattcattataattatatgtg 19206100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 22484025 - 22484075
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| |||||||||||||||||  ||||||| ||| ||||||||||||    
T  22484025 gacaccgctaataattttagaaaattgcataattcagtataattatatgtg 22484075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 22868050 - 22868092
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| | |||||||||||||||| ||||||||||||||||    
T  22868050 taataatatgagaaaatcacataattcagtgtaattatatgtg 22868092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 24146824 - 24146866
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||||||||| | | ||||||||||||    
T  24146824 taataattttagaaaatcacataattcaatataattatatgtg 24146866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 2424622 - 2424659
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattat 79  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  2424622 taataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 23191896 - 23191945
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    ||||||| ||||||||| ||||||||||||| || |||||||||| ||||    
T  23191896 gacaccgctaataatttgagaaaatcacatatttcagtgtaattacatgt 23191945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 35493423 - 35493460
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  35493423 ataatttgagaaaatcacataatttagggtaattatat 35493460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 39138458 - 39138491
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatat 81  Q
    |||||||||||||||||||| |||||||||||||    
T  39138458 ttttagaaaatcacataattcagtgtaattatat 39138491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 9482944 - 9482984
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||||| |||| ||||||||||||||||    
T  9482944 ataatttgagaaaatcacacaattcagtgtaattatatgtg 9482984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 10377507 - 10377555
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||| ||||||||| | ||||||||| |||||| ||||||||||||||    
T  10377507 gacactgttaataatataagaaaatcatataattcagtgtaattatatg 10377555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 35297724 - 35297669
Alignment:
Q  41 ttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgt 94  Q
    |||||||||| |||||||||||||||| | | ||||||||||||  ||||||||||    
T  35297724 ttaataatttgagaaaatcacataattcattataattatatgtgttggtgtcgtgt 35297669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 82
Target Start/End: Original strand, 41020516 - 41020544
Alignment:
Q  54 aaaatcacataatttagtgtaattatatg 82  Q
    |||||||||||||||||||||||||||||    
T  41020516 aaaatcacataatttagtgtaattatatg 41020544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 3966503 - 3966587
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||||||  ||||||||||| |||| |||||||||| ||||    
T  3966503 gacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgt 3966587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 18592073 - 18592157
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||| ||||| ||| ||||||| |||||||| | ||||||||||||||  |||||||||||||||| |||||||||||||||    
T  18592073 gacaccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgt 18592157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 11685939 - 11686022
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||| ||||||||| ||||| || ||||||||||||||||||||||||  |||||||| ||||||| |||||| ||||||||    
T  11685939 gacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacgacacgtgt 11686022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 21814275 - 21814345
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||||||| |||  ||||||||||||||||  |||||||||||||||| |||||| ||||||||    
T  21814275 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21814345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 27144463 - 27144513
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||||||||    
T  27144463 gacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtg 27144513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 36838544 - 36838605
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgt 94  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||  ||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgt 36838605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 21522758 - 21522834
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||| ||||| |||||||| |||||||||| |  ||| |||||||||||||||| |||||| ||||||||    
T  21522758 taataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21522834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 21533324 - 21533400
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||| ||||| |||||||| |||||||||| |  ||| |||||||||||||||| |||||| ||||||||    
T  21533324 taataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21533400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 6471949 - 6471886
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgt 94  Q
    |||||| | ||||||||| |||||||||||||||| ||||||||||||  ||||||||||||||    
T  6471949 tgacacggctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgt 6471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 24273090 - 24273038
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 85  Q
    |||||| |||| |||||| |||||||||||||||| |||||||||||||||||    
T  24273090 tgacacagttattaatttgagaaaatcacataattcagtgtaattatatgtgg 24273038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 24389124 - 24389176
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 85  Q
    |||||| |||| |||||| |||||||||||||||| |||||||||||||||||    
T  24389124 tgacacagttattaatttgagaaaatcacataattcagtgtaattatatgtgg 24389176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 35017045 - 35017085
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  35017045 taataatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 6401512 - 6401582
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||||||| |||  ||||||||||||||||  ||||||||||| |||| |||||| ||||||||    
T  6401512 ttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgt 6401582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 7175078 - 7175028
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||||| ||||||||||||||||| |  ||||||||||||    
T  7175078 gacaccgttaataatttgagaaaatcacataatttggcataattatatgtg 7175028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 16203846 - 16203804
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  16203846 taataatttgagaaaatctcataatttagtgtaattatatgtg 16203804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 28588733 - 28588687
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  28588733 gacaccggtaataatttgagaaaatcacataattcagtgtaattata 28588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 30098329 - 30098410
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattat--atgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    |||||||||||||| |||||||||||||||| | |||||||||  |||| ||| ||| ||| |||| |||||| ||||||||    
T  30098329 accgttaataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtgt 30098410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 2577239 - 2577190
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||| ||||||    
T  2577239 gacaccgataataatttgagaaaatgacataatttagtgtaatcatatgt 2577190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 30502446 - 30502397
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| |||||||||| ||||| ||||||||||||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtg 30502397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 30542789 - 30542740
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| |||||||||| ||||| ||||||||||||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtg 30542740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 14873527 - 14873567
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtg 14873567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 19579709 - 19579776
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacac 107  Q
    ||||||||| ||||||||||||||||||||| ||||| |  ||| ||||||||||| |||| ||||||    
T  19579709 taataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacac 19579776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 39758286 - 39758322
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||| ||||||||||||||||    
T  39758286 ttttagaaaatcacataattcagtgtaattatatgtg 39758322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 12927662 - 12927701
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  12927662 taataatttgagaaaatcatataatttagtgtaattatat 12927701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 19429438 - 19429500
Alignment:
Q  40 gttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgt 100  Q
    ||||||||||| |||||||||||||| ||||||||| ||| ||||  | ||||||||||||||    
T  19429438 gttaataatttgagaaaatcacataacttagtgtaaatatctgtgtcgctgtcgtgtcggtgt 19429500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 23016049 - 23016002
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||| ||||||| |||| |||||||||||||||| ||||||||||||    
T  23016049 tgacatcgttaatcatttgagaaaatcacataattcagtgtaattata 23016002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 5468034 - 5467975
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgt 100  Q
    |||| ||||||||| | |||||||||||||| ||||||||||||    ||||||||||||||||    
T  5468034 accgataataatttgataaaatcacataattcagtgtaattata----ggtgtcgtgtcggtgt 5467975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 23012459 - 23012417
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||    
T  23012459 taataatttgagaaaatcatataatttaatgtaattatatgtg 23012417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 23220983 - 23221033
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| | |||||||||||||||||||| || |||||||    
T  23220983 gacaccgctaataatttgataaaatcacataatttagtgttatcatatgtg 23221033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 28262450 - 28262408
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  28262450 cgttgataatttgagaaaatcacataatttagggtaattatat 28262408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 41091308 - 41091266
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| |||| |||||||||||||||| ||||||||||||||||    
T  41091308 taatgatttgagaaaatcacataattcagtgtaattatatgtg 41091266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 3751981 - 3751905
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| |||||||||||||| | ||| ||||||||||||   || ||||||| |||||| |||| ||||||||    
T  3751981 taataatttgagaaaatcacataactaagtataattatatgtgttagtatcgtgtcagtgttgaacacgacacgtgt 3751905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 17593783 - 17593734
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||| |||| ||||||||| |||||||||| ||||| |||||||||||||    
T  17593783 ttgaaaccgctaataatttgagaaaatcacgtaattcagtgtaattatat 17593734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 21542038 - 21542114
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| | || || |||||||| |||||||||| | |||  |||||||||||||||| |||||| ||||||||    
T  21542038 taataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21542114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 22423863 - 22423803
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaat--tatatgtgggtgtcgtgtcggtgt 100  Q
    ||||||||| |||||||||||||||| | | ||||  ||||||| ||||||||||||||||    
T  22423863 taataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgtcggtgt 22423803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 32767002 - 32766934
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgt 100  Q
    ||||||| ||||||||| |||||||| || |||| | ||||||||||||||   |||||||||||||||    
T  32767002 gacaccgctaataatttgagaaaatcgcacaattcaatgtaattatatgtgtttgtgtcgtgtcggtgt 32766934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 39698540 - 39698616
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacac 107  Q
    |||||| | ||||||||| | |||||||||||||| |||||||||| |  |||  ||||||||||||||| ||||||    
T  39698540 tgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacac 39698616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 14674277 - 14674313
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  14674277 taataatttgaaaaaatcacataatttagtgtaatta 14674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 18421890 - 18421850
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| |||||||||||||||  ||||||||||||||||    
T  18421890 ataatttgagaaaatcacataatccagtgtaattatatgtg 18421850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 33178033 - 33178069
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  33178033 taataatttaaaaaaatcacataatttagtgtaatta 33178069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 37328883 - 37328828
Alignment:
Q  54 aaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacac 107  Q
    ||||||||| |||| |||||||||| |||||  |||||||||||||||| ||||||    
T  37328883 aaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggacac 37328828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 39205888 - 39205943
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtc 95  Q
    ||||||||| ||||||||| ||||||  |||||||||||||||  |||||||||||    
T  39205888 taataatttgagaaaatcatataattaggtgtaattatatgtgttggtgtcgtgtc 39205943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 43554529 - 43554590
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgttggacac 107  Q
    ||||||||| ||||||| | ||||||||||||||| |||    |||||||||||||||| ||||||    
T  43554529 taataatttgagaaaatgatataatttagtgtaatcata----ggtgtcgtgtcggtgtcggacac 43554590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 3e-16; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 25038148 - 25038086
Alignment:
Q  15 cacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||||||    
T  25038148 cacagatactgacacgtt-gacaccgttaataatttgagaaaattacataatttagtgtaatta 25038086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 5732569 - 5732519
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  5732569 gacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtg 5732519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 5970167 - 5970087
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaatt--atatgtgggtgtcgtgtcggtgttggacacaacac 112  Q
    ||||| ||||||||||| | |||||||||||||| |||||||||  | ||||||||||||||||||||| |||||| ||||    
T  5970167 gacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacac 5970087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 16766705 - 16766781
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| | |||||||||||||| |||||||||| | |||  |||||||||||||||| |||||||||||||||    
T  16766705 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgt 16766781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 31579283 - 31579227
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgtcg 91  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| ||| |||||||    
T  31579283 acaccgttaataatttgagaaaatcacataattcagtgtaattatgtgtcggtgtcg 31579227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 16488635 - 16488565
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||||||| |||  ||||||||||||||||  |||||||||||||||| |||||| ||||||||    
T  16488635 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 16488565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 7086803 - 7086845
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  7086803 taataatttgagaaaatcacataatttagtgtaattatatgtg 7086845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 19040352 - 19040402
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  19040352 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 19040402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 7248366 - 7248442
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||| | || ||||||||||||| || |||||||||||||  || |||||||||||||||||||||||| ||||    
T  7248366 taataatctgaggaaatcacataattcagggtaattatatgtgttggagtcgtgtcggtgttggacacaacatgtgt 7248442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 7265651 - 7265602
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  7265651 acaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 7265602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 8805623 - 8805570
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtc 95  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  8805623 taataatttgagaaaatcacataatttagtgtaattatgtgtcggtgtagtgtc 8805570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 9195805 - 9195745
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgt 100  Q
    ||||||||| ||||||| |||||||||||||||||||||||||  |||||||||| |||||    
T  9195805 taataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgtaggtgt 9195745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 5462685 - 5462733
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||    
T  5462685 tgacaccgttaataatttgagaaaatcacataattcattgtaattatat 5462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 9025545 - 9025490
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtc 95  Q
    ||||||||| |||||||||||||||| ||||||||||||||||  |||||||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtc 9025490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 9658879 - 9658926
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||    
T  9658879 gacaccgctaataatttaagaaaatcacataattcagtgtaattatat 9658926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 32511726 - 32511679
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  32511726 tgacaccgctaataatttaagaaaatcacataattcagtgtaattata 32511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 8713979 - 8714060
Alignment:
Q  34 gacaccgttaataattttagaaaa-tcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacac 112  Q
    ||||| ||||||||||| | |||| |||||||||| |||||||||| |  |||||||||||||||||||| |||||| ||||    
T  8713979 gacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacac 8714060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 10842532 - 10842582
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| | ||||||||||||||||||||||| |||||||    
T  10842532 gacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtg 10842582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 10889033 - 10888983
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| | |||||||||||||||||||| ||||||||||    
T  10889033 gacaccgctaataatttgataaaatcacataatttagtgtgattatatgtg 10888983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 17302355 - 17302397
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||||||||||||| |||||||||||||||    
T  17302355 taataatttaagaaaatcacataattttgtgtaattatatgtg 17302397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 17341723 - 17341677
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||    
T  17341723 gacaccgttaataatttgataaaatcacataattcagtgtaattata 17341677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 1532241 - 1532305
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgt 100  Q
    |||||| ||||||||| | ||||| |||||||| ||||||||||||||| |||||||||| |||||    
T  1532241 acaccgctaataatttgataaaattacataattcagtgtaattatatgt-ggtgtcgtgttggtgt 1532305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 9617437 - 9617509
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacac 107  Q
    |||| ||||||||| |||||||||||||||| | ||||||||||||||  ||||||||  |||||| ||||||    
T  9617437 accggtaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgtcgcggtgtcggacac 9617509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 26562701 - 26562757
Alignment:
Q  46 aattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgt 100  Q
    ||||| |||||||||||||||| ||||||||||||||||  | ||||||||||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcggtgt 26562757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 30866202 - 30866153
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtg 30866153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 32298665 - 32298616
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| |||  ||||||||||||||||||||||||||||    
T  32298665 acaccgctaataatttaagatcatcacataatttagtgtaattatatgtg 32298616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 34073398 - 34073338
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatat--gtgggtgtcgtgtcggtgt 100  Q
    ||||||||| |||||||| ||||||| |||||||||||||  || ||||||||||||||||    
T  34073398 taataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcggtgt 34073338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 34447416 - 34447359
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgt 92  Q
    |||||||||||||||| | ||||||| |||||||||||||||| | ||| ||||||||    
T  34447416 acaccgttaataatttgataaaatcatataatttagtgtaattttgtgtcggtgtcgt 34447359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 9027178 - 9027241
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtc 95  Q
    ||||||| ||||||||| ||| ||||||||||||  |||||||||||||||  |||||||||||    
T  9027178 gacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgtc 9027241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 142
Target Start/End: Original strand, 9629383 - 9629493
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtc-gtgtcggtgttggacacaacacgtgtttgataatgatgca 130  Q
    |||||||  |||||||| |||||||||||||||| | ||||||||||||||  |||||| ||||| |||| |||||||||| ||||  || | |||  ||    
T  9629383 gacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggtgtc-gtgtcggacacaacatgtgtccgacactgagaca 9629481  T
Q  131 cgtctaatccga 142  Q
    ||||||||||||    
T  9629482 cgtctaatccga 9629493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 9107421 - 9107351
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaac 110  Q
    ||||||||| | ||||||||| |||| |||||||||| | |||  |||||||||||||||| |||||||||    
T  9107421 taataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaac 9107351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 18367850 - 18367904
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgt 100  Q
    ||||||||||||||| |||  ||||||||||||||||  ||||||||||||||||    
T  18367850 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgt 18367904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 21395365 - 21395292
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacac 107  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||| |  ||| ||||||||||| |||| ||||||    
T  21395365 acaccgctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacac 21395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 7151420 - 7151462
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| | |||||||||||||| ||||||||||||||||    
T  7151420 taataatttgaaaaaatcacataattaagtgtaattatatgtg 7151462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 7377979 - 7378029
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||| ||||| |||||||||||||||| | ||||||||||||||    
T  7377979 gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtg 7378029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 11591917 - 11591879
Alignment:
Q  46 aattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtg 11591879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 13360420 - 13360382
Alignment:
Q  45 taattttagaaaatcacataatttagtgtaattatatgt 83  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattatatgt 13360382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 13851736 - 13851786
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| ||||||| || ||||| ||||||||||||||||    
T  13851736 gacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtg 13851786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 24832596 - 24832638
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||||  |||||||||||||||||||||||    
T  24832596 taataatttgagaaaatcttataatttagtgtaattatatgtg 24832638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 26178732 - 26178690
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| | ||||||||||||||||||||||| |||||||    
T  26178732 taataatttgataaaatcacataatttagtgtaatcatatgtg 26178690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 32248979 - 32248937
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||    
T  32248979 cgttgataattttaaaaaatcacataatttagggtaattatat 32248937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 32320729 - 32320679
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    |||||||||||||||||| | |||||||||||||| | ||| |||||||||    
T  32320729 tgacaccgttaataatttgataaaatcacataattcaatgtcattatatgt 32320679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 34290128 - 34290070
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgt 100  Q
    |||||||||  || |||||||||||| ||||||||||| ||| ||||||||||| ||||    
T  34290128 taataatttgcgagaatcacataattcagtgtaattatgtgtcggtgtcgtgtcagtgt 34290070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 34868838 - 34868761
Alignment:
Q  42 taataattttagaaaatc-acataatttagtgtaattatatgtgg--gtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||| |||| | |||||||| |||||||||||||||    |||||||||| |||||||| |||||||||||    
T  34868838 taataattttaaaaaaaccacataattcagtgtaattatatgtcttagtgtcgtgtcagtgttggatacaacacgtgt 34868761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 24833284 - 24833243
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    |||||| || |||||||| |||||||||||||||||||||||    
T  24833284 taataagttaagaaaatcgcataatttagtgtaattatatgt 24833243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 677837 - 677885
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||| ||||||||||| ||||||||| ||||| ||||||| |||||||    
T  677837 gacactgttaataatttgagaaaatcatataatatagtgtatttatatg 677885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 7996429 - 7996389
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||||| ||||||||| |||||| ||||||||||||||    
T  7996429 taataatttgagaaaatcatataattcagtgtaattatatg 7996389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 8022372 - 8022412
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||||| ||||||||| |||||| ||||||||||||||    
T  8022372 taataatttgagaaaatcatataattcagtgtaattatatg 8022412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 14721239 - 14721291
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||| |||||||||| ||||||| |||||||| | | ||||||||||||    
T  14721239 ttgacaccattaataatttaagaaaattacataattcactataattatatgtg 14721291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 17168514 - 17168453
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgttggacac 107  Q
    ||||||||| ||||||| | ||||||||||||||| |||    |||||||||||||||| ||||||    
T  17168514 taataatttgagaaaatgatataatttagtgtaataata----ggtgtcgtgtcggtgtcggacac 17168453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 17327696 - 17327664
Alignment:
Q  52 agaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||||||| ||||||||    
T  17327696 agaaaatcacataatttagtgtaactatatgtg 17327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 17841640 - 17841604
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  17841640 taataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 19147842 - 19147905
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtc 95  Q
    ||||||||||||||||| ||||||||| |||  | || |||||||||||||  |||||||||||    
T  19147842 gacaccgttaataatttaagaaaatcatatagatcagagtaattatatgtgtcggtgtcgtgtc 19147905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 21885790 - 21885842
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||||| | ||||| |||||||||| | ||||||||||||    
T  21885790 ttgacaccgataataatttaaaaaaataacataatttaatctaattatatgtg 21885842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 25096431 - 25096467
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  25096431 taataatttgagaaaatcacataatctagtgtaatta 25096467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 3e-16; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 44482240 - 44482310
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacac 112  Q
    ||||||| |||||||||||||||| ||||||||||||||||  |||||||||||||||| |||||| ||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacac 44482310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 39953205 - 39953155
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  39953205 gacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtg 39953155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 12713378 - 12713302
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg--tgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| |||||||||||||||||||||||||||||||  | |||||  ||||||||| | |||||||||||||    
T  12713378 taataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12713302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 12717469 - 12717393
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg--tgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| |||||||||||||||||||||||||||||||  | |||||  ||||||||| | |||||||||||||    
T  12717469 taataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12717393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 34257969 - 34257922
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  34257969 gacaccgttaataatttaataaaatcacataatttagtgtaattatat 34257922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 1864939 - 1864889
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  1864939 gacacagttaataatttgagaaaatcacataattcagtgtaattatatgtg 1864889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 25272479 - 25272544
Alignment:
Q  31 tttgacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgt 94  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||||  ||| ||||||||||    
T  25272479 tttgacacagttaacaatttgagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25272544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 25361896 - 25361961
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacac 107  Q
    ||||||| |||||||||||||||| ||||||||||||||||   ||||||||||||||| ||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacac 25361961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 34371713 - 34371797
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    |||||||| ||||||||  |||||||||||||||| ||||||||||||||||  |||||||||| ||||| ||| || ||||||||    
T  34371713 tgacaccgctaataattg-agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgacacgtgt 34371797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 14332693 - 14332652
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  14332693 taataatttgagaaaatcacataatttagtgtaattatatgt 14332652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 16164366 - 16164290
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| | |||||||||||||||| ||||||||||||||    |||||||| |||||||||| ||||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtcattgtcgtgttggtgttggacgcaacacgtgt 16164290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 6427351 - 6427422
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttgga 104  Q
    |||||| ||||||||| |||||||||||||||| | ||||||||||||||  ||||||||||| | ||||||    
T  6427351 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgtcagggttgga 6427422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 17754311 - 17754390
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg--gtgtcgtgtcggtgttggacacaaca 111  Q
    ||||||| ||||||||| | ||||| |||||||| ||||||| ||||||||   |||| |||||||||||||||||||||    
T  17754311 gacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaaca 17754390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 39130819 - 39130776
Alignment:
Q  41 ttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  39130819 ttaataattttagaaaattatataatttagtgtaattatatgtg 39130776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 2784556 - 2784606
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||| ||||| |||||||||||||||| ||| ||||||||||||    
T  2784556 gacaccgttaaaaatttaagaaaatcacataattgagtataattatatgtg 2784606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 7918262 - 7918220
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattatatgtg 7918220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 13997883 - 13997933
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||| |||| | |||||||||||||| ||||||||||||||||    
T  13997883 gacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtg 13997933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 25098614 - 25098564
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| | ||||||| |||||||||||||||| ||||||||||||||||    
T  25098614 gacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtg 25098564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 26238171 - 26238091
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||| |||||||   || |||||||||| |||||||||||||||    
T  26238171 gacaccgctaataatttgagaaaataacataattcagtgtaat-atatgtgtcagt-gtgtcggtgtcggacacaacacgtgt 26238091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 27471622 - 27471541
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    |||| ||||||||| |||||| ||||||||| |||||||||| |||||  |||||| | ||||||||||| || ||||||||    
T  27471622 accgctaataatttgagaaaagcacataattcagtgtaattacatgtgttggtgtcatatcggtgttggatacgacacgtgt 27471541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 34712434 - 34712392
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  34712434 taataatttgagaaaataacataatttagtgtaattatatgtg 34712392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 36878461 - 36878507
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  36878461 gacaccgctaataatttgagaaaatcacataattcagtgtaattata 36878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 9828052 - 9828128
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| | |||||||||||||| ||||||||| ||||||  ||||||||||| ||||  ||||| ||||||||    
T  9828052 taataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgt 9828128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 12707924 - 12707848
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg--tgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| ||||||||| ||||||||||| |||||||||  | |||||  ||||||||| | |||||||||||||    
T  12707924 taataatttaagaaaatcatataatttagtgcaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12707848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 40181879 - 40181920
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattatatgt 40181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 47989505 - 47989577
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacac 112  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| |||||||||||||||| |||||| ||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacac 47989577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 19324572 - 19324612
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 20157409 - 20157346
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtc 95  Q
    ||||||| ||||||| | |||||||||||||||| |||||||| |||||||  |||||||||||    
T  20157409 gacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtc 20157346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 25934633 - 25934700
Alignment:
Q  51 tagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    |||||||||||| |||  ||||||||||||||||  ||| |||||||||||| |||||| ||||||||    
T  25934633 tagaaaatcacaaaatacagtgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgt 25934700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 30749854 - 30749890
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30749854 ttttagaaaatcacataattcagtgtaattatatgtg 30749890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 30771305 - 30771341
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30771305 ttttagaaaatcacataattcagtgtaattatatgtg 30771341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 41877529 - 41877485
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||    
T  41877529 gacaccgctaataatttgagaaaattacataatttagtgtaatta 41877485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 48148112 - 48148049
Alignment:
Q  18 agatactgacatgtttgacaccgttaataattttagaaaa-tcacataatttagtgtaattatat 81  Q
    ||||||||||||||| ||||||| ||||||||||| |||| ||| |||||| |||||||||||||    
T  48148112 agatactgacatgtt-gacaccgctaataattttaaaaaaatcatataattcagtgtaattatat 48148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 1486769 - 1486703
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcgg 97  Q
    |||||| | ||||||||| | |||||||||||||| ||||||||||||  ||| |||||||||||||    
T  1486769 tgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgg 1486703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 38503320 - 38503386
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggt 98  Q
    ||||||| ||||||||| ||||||||| ||| || ||||||||||||||||  |||||| |||||||    
T  38503320 gacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtcctgtcggt 38503386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 52903252 - 52903299
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||| | ||||||| |||||| ||||||||||||||||    
T  52903252 accgttaataatttaataaaatcatataattcagtgtaattatatgtg 52903299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 398824 - 398778
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||| ||||||||| | |||||||||||||| ||||||||||||    
T  398824 gacaccgctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 10233261 - 10233303
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| || |||||||||||||||| ||||||||||||||||    
T  10233261 taataaattgagaaaatcacataattcagtgtaattatatgtg 10233303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 12443511 - 12443469
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||    
T  12443511 taataatttgagaaaatcacataattcagtgtaattgtatgtg 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 13436466 - 13436508
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  13436466 taataatttaaggaaatcacataattcagtgtaattatatgtg 13436508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 17425152 - 17425102
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| | |||||||||||||| | ||||||||||||||    
T  17425152 gacaccgataataatttgataaaatcacataattcaatgtaattatatgtg 17425102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 17831590 - 17831540
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||||| ||| |||||||| |||||||    
T  17831590 gacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtg 17831540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 21530689 - 21530735
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||||||||||||| ||||||||| ||||||| || ||||||||    
T  21530689 gacaccgttaataatttgagaaaatcatataatttggtataattata 21530735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 28674801 - 28674847
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||||||||||||||| ||||||| |||||||| ||| |||||||||    
T  28674801 acaccgttaataatttgagaaaattacataattcagtataattatat 28674847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 32724157 - 32724107
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| |||||||||||| ||||| | |||||||||| ||||||||||||||    
T  32724157 gacatcgttaataatttgagaaatttacataatttaatgtaattatatgtg 32724107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 34298444 - 34298482
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  34298444 taataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 35999373 - 35999331
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||    
T  35999373 taataatttaagaaaatcatataatttagtataattatatgtg 35999331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 44296553 - 44296489
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcgg 97  Q
    ||||||| ||||||||| ||||||| |||||||||||| |||| |||||||  |||||||||||||    
T  44296553 gacaccggtaataatttgagaaaatgacataatttagt-taatcatatgtgtcggtgtcgtgtcgg 44296489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 2288218 - 2288169
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtcg 91  Q
    ||||||||| |||||||||||||||| | ||||||||| ||| |||||||    
T  2288218 taataatttaagaaaatcacataattcaatgtaattatgtgtcggtgtcg 2288169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 112
Target Start/End: Original strand, 5944303 - 5944363
Alignment:
Q  54 aaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacac 112  Q
    |||||||||||||| ||||||||||||  ||| |||||||||||| ||  |||||||||||    
T  5944303 aaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaacac 5944363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 9629959 - 9629879
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacac 112  Q
    ||||||| ||||||||| | ||||||| |||||| ||||| |||||| |||  |||||||||||| ||| |||||| ||||    
T  9629959 gacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacac 9629879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 9709821 - 9709870
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| ||||||||||||||||   ||||||||||||||    
T  9709821 acaccgctaataatttgagaaaatcacataattcgttgtaattatatgtg 9709870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 15323169 - 15323206
Alignment:
Q  40 gttaataattttagaaaatcacataatttagtgtaatt 77  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  15323169 gttaataatttgaaaaaatcacataatttagtgtaatt 15323206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 15641081 - 15641028
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtc 95  Q
    ||||||||| |||||||||||| ||| ||||||| ||||| | |||||||||||    
T  15641081 taataatttaagaaaatcacatgattcagtgtaactatatatcggtgtcgtgtc 15641028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 20132024 - 20131987
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  20132024 ataatttgagaaaatcacataatttagggtaattatat 20131987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 21038086 - 21038158
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatgtgg--gtgtcgtgtcggtgttggacac 107  Q
    |||| ||||||||| ||||||| |||||||| |||||||| ||||| |   ||||||||||||||| ||||||    
T  21038086 accgctaataatttaagaaaattacataattcagtgtaatcatatgcgtcagtgtcgtgtcggtgtcggacac 21038158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 31694749 - 31694689
Alignment:
Q  54 aaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacac 112  Q
    |||||||||||||| ||| |||||| | |||  |||||||||||||||| |||||||||||    
T  31694749 aaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacac 31694689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 32461514 - 32461439
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| | |||||||||||||||| |||||||| |  ||| ||||| |||||||||| |||||| ||||||||    
T  32461514 taataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgt-gtgtcggtgtcggacacgacacgtgt 32461439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 36905998 - 36906047
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||| | |||||||||||||||| || |||||||||||||    
T  36905998 acaccgctaataatctgagaaaatcacataattcagagtaattatatgtg 36906047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 45534235 - 45534202
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatat 81  Q
    |||||||||||||||||||||||||||| |||||    
T  45534235 ttttagaaaatcacataatttagtgtaagtatat 45534202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 2896180 - 2896140
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgta 74  Q
    ||||||| ||||||||| |||||||||||||||| ||||||    
T  2896180 gacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 5898325 - 5898277
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||| ||||||| | | |||||||||||||| ||||||||||||||    
T  5898325 gacaccgctaataatctgaaaaaatcacataattcagtgtaattatatg 5898277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 22515938 - 22515902
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  22515938 taataatttgaaaaaatcacataatttagtgtaatta 22515902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 22881667 - 22881631
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  22881667 taataatttgaaaaaatcacataatttagtgtaatta 22881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 25452199 - 25452151
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtc 90  Q
    ||||||||| |||||||| ||||||| ||||||||||| ||| ||||||    
T  25452199 taataatttgagaaaatctcataattcagtgtaattatgtgtcggtgtc 25452151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 29229460 - 29229512
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagt-gtaattatatgtg 84  Q
    |||||| | ||||||||| |||||||||||| ||||||| |||||||||||||    
T  29229460 tgacactgctaataatttgagaaaatcacatgatttagtggtaattatatgtg 29229512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 31015051 - 31015087
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  31015051 taataatttgagaaaatcacataattcagtgtaatta 31015087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 37055907 - 37055871
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  37055907 taataatttgagaaaattacataatttagtgtaatta 37055871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 42004998 - 42004937
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgttggacac 107  Q
    ||||||||| ||||||| ||||||||||||||||| |||    ||||| |||||||||| ||||||    
T  42004998 taataatttgagaaaatgacataatttagtgtaatcata----ggtgttgtgtcggtgtcggacac 42004937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 11803258 - 11803331
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttgga 104  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||||||||||  ||||| |||| |||||||||    
T  11803258 tgacactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgttgga 11803331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 39954338 - 39954288
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  39954338 gacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 4786397 - 4786347
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  4786397 gacaccattaataatttaagaaaatcacataattcagtgtaattatatgtg 4786347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 14731720 - 14731762
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  14731720 taataatttgagaaaatcacataatttagtgtaattatatgtg 14731762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 15816180 - 15816107
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacg 113  Q
    ||||||||| | |||||||||||||||||||||||||||  ||| |||||||||| ||||| |||||| |||||    
T  15816180 taataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacg 15816107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 34897085 - 34897135
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  34897085 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 34897135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 2572107 - 2572031
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| | ||||||||||||||||||||||||| |  ||| ||||||||||| |||| |||||| ||||||||    
T  2572107 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgtgt 2572031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 11927145 - 11927077
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgt 100  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||||||||  |||||||||| |||||    
T  11927145 gacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgt 11927077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 33405437 - 33405393
Alignment:
Q  40 gttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||    
T  33405437 gttaataatttgagaaaaacacataatttagtgtaattatatgtg 33405393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 13844647 - 13844605
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  13844647 taataatttgagaaaatcacataattgagtgtaattatatgtg 13844605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 24362261 - 24362211
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||| ||| |||||||||||| ||||||||||||||||    
T  24362261 gacaccgctaataatttgagagaatcacataattcagtgtaattatatgtg 24362211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 4611534 - 4611583
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||||||||||    
T  4611534 gacaccgctaataatttgagaaaataacataattcagtgtaattatatgt 4611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 13018284 - 13018329
Alignment:
Q  37 accgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    |||||||||||||| | ||||||||||||||||||||||| |||||    
T  13018284 accgttaataatttgacaaaatcacataatttagtgtaatgatatg 13018329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 20785523 - 20785474
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| || ||||||||||||||| ||||||||||||||    
T  20785523 acaccgctaataatttgaggaaatcacataatttaatgtaattatatgtg 20785474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 12570569 - 12570517
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| | ||||||||| |||||| ||||||||| ||||||||||||||||    
T  12570569 ttgacactgctaataatttaagaaaaacacataattaagtgtaattatatgtg 12570517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 26902217 - 26902150
Alignment:
Q  51 tagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||||||||| ||||||||||||||||  |||||||| |  |||| |||||| ||||||||    
T  26902217 tagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgt 26902150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 31580180 - 31580140
Alignment:
Q  40 gttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  31580180 gttaataatttaagaaaatcacataattgagtgtaattata 31580140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 11944665 - 11944727
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgt 94  Q
    ||||| ||||||||||| | |||||||||||| | ||||||||||||||||  ||||||||||    
T  11944665 gacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgt 11944727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 14134707 - 14134746
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaattatat 14134746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 3025559 - 3025597
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattata 3025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 7472586 - 7472524
Alignment:
Q  22 actgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||| || ||||||  ||||||||| |  ||||||||||| ||||||||||||||||||    
T  7472586 actgacatattcgacaccactaataatttaaagaaatcacataaattagtgtaattatatgtg 7472524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 24447034 - 24447076
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  24447034 cgttgataatttgagaaaatcacataatttagggtaattatat 24447076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 27213555 - 27213597
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||| | ||||||||||||||    
T  27213555 taataatttcagaaaatcacataattcactgtaattatatgtg 27213597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 100
Target Start/End: Original strand, 29447467 - 29447512
Alignment:
Q  57 atcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgt 100  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||    
T  29447467 atcacataattaagtgtaattatatgtgttggtgtcgtgtcggtgt 29447512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 31236628 - 31236586
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||| | ||||||||||||||    
T  31236628 taataatttgagaaaatcacataattcaatgtaattatatgtg 31236586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 34222955 - 34222997
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| | |||||||||||||| ||||||||||||||||    
T  34222955 taataatttaataaaatcacataattaagtgtaattatatgtg 34222997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 12570795 - 12570746
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||||| ||||||||| |||||| | ||||||| |||||||||||||    
T  12570795 ttgacaccgctaataatttaagaaaaacgcataattaagtgtaattatat 12570746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 24669432 - 24669477
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    |||||||||||||||||| || |||| |||||||| ||||||||||    
T  24669432 tgacaccgttaataatttgaggaaattacataattcagtgtaatta 24669477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 26529751 - 26529788
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  26529751 ataatttgagaaaatcacataatttagggtaattatat 26529788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 29776044 - 29776113
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgttggacacaaca 111  Q
    ||||||||| |||||||||| ||||| ||| ||||||||||| |||||   ||| |||| ||||||||||    
T  29776044 taataatttgagaaaatcacgtaattcagtataattatatgtcggtgttaagtcagtgtcggacacaaca 29776113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 33382077 - 33382028
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||||||||| ||||||| |||||||| || |||||||||||||    
T  33382077 acaccgataataatttaagaaaatgacataattcagagtaattatatgtg 33382028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 37283867 - 37283814
Alignment:
Q  36 caccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgt 89  Q
    ||||| ||||||| | |||||||||||||||| ||||||||||| ||| |||||    
T  37283867 caccgctaataatctgagaaaatcacataattcagtgtaattatgtgtcggtgt 37283814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 4298945 - 4298901
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||| ||||||||||| | |||||||||||||||| ||||||||    
T  4298945 gacacagttaataatttgaaaaaatcacataatttaatgtaatta 4298901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 8342980 - 8343016
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  8342980 taataatttgaaaaaatcacataatttagtgtaatta 8343016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 8343324 - 8343360
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  8343324 taataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 18067994 - 18067954
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgt 73  Q
    |||||||| ||||||||| |||||||||||||||| |||||    
T  18067994 tgacaccgctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 18964191 - 18964227
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||| | ||||||||||||||    
T  18964191 ttttagaaaatcacataattcaatgtaattatatgtg 18964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 20679471 - 20679408
Alignment:
Q  16 acagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||| ||||||||||  ||||||  ||||||||| ||||||||||||| || ||||||||||||    
T  20679471 acagacactgacatgtc-gacacccctaataatttgagaaaatcacatagttcagtgtaattata 20679408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 20873077 - 20873113
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaatta 20873113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 22440659 - 22440609
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  22440659 gacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 903924 - 904006
Alignment:
Q  36 caccgttaataattttagaaaatcacataatttagtgtaattatatgtgg--gtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||    || |||| |||||||||||||| ||| ||||    
T  903924 caccgttaataatttgagaaaatcacataattcagtgtaattatatgtatcagtatcgtatcggtgttggacacgacatgtgt 904006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 5775417 - 5775367
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  5775417 gacaccattaataatttgagaaaatcacataattaagtgtaattatatgtg 5775367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 13134460 - 13134532
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgt 114  Q
    ||||||| |||||||||||||||||||||||||||||||||  | ||||||||||  || | |||||||||||    
T  13134460 ataatttaagaaaatcacataatttagtgtaattatatgtgtcgatgtcgtgtcgacgtcgaacacaacacgt 13134532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 40742591 - 40742659
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgt 100  Q
    |||||| |||||||||| ||||||||| ||||| |||||||||||||||||  | ||||||||||||||    
T  40742591 gacaccattaataatttgagaaaatcatataatctagtgtaattatatgtgtcgatgtcgtgtcggtgt 40742659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 21539926 - 21539879
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  21539926 gacaccattaataatttaagaaaatcatataatttagtgtaattatat 21539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 30982935 - 30982853
Alignment:
Q  36 caccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||| |||| |||| ||||||||||||| || ||||||||||||  ||| ||||||||||||||||  ||||| ||||||||    
T  30982935 caccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgt 30982853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 38148784 - 38148702
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaa--ttatatgtgggtgtcgtgtcggtgttggacacaacacgt 114  Q
    ||||||| ||||| ||| |||||||||||||||| |||||||  ||| |||| | |||||||| |||||||||||| ||||||    
T  38148784 gacaccgctaatagtttgagaaaatcacataattcagtgtaattttaaatgtcgatgtcgtgttggtgttggacacgacacgt 38148702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 46084036 - 46083966
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    |||||| |||||||||||| |||||||||||||||||  ||||||||||| || | |||||| ||||||||    
T  46084036 ttttagtaaatcacataatctagtgtaattatatgtgtcggtgtcgtgtcagtatcggacacgacacgtgt 46083966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 8423777 - 8423731
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  8423777 gacaccgctaataatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 11931280 - 11931330
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||| | | |||||||||||||||||||||| ||||||||    
T  11931280 gacaccgttaataatatgaaaaaatcacataatttagtgtaaatatatgtg 11931330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 19500897 - 19500836
Alignment:
Q  54 aaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacg 113  Q
    |||| |||||| |||||||||||||||||||  |||||||||||||||| |||||| |||||    
T  19500897 aaaaacacatattttagtgtaattatatgtgatggtgtcgtgtcggtgtcggacacgacacg 19500836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 36635332 - 36635374
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  36635332 taataatttgagaaaatcacataattcagtgtaattatatgtg 36635374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 40613450 - 40613500
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||| ||| |||||||||||||||| ||||||||||||||||    
T  40613450 gacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtg 40613500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 49653023 - 49652969
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcg 96  Q
    ||||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||    
T  49653023 taataatttaagaaaatcagataattcagtataattatatgttggtgtcgtgtcg 49652969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 22234929 - 22234865
Alignment:
Q  54 aaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    |||||||||||||| ||||||||| ||||||  ||||||||||||||||  ||||| ||||||||    
T  22234929 aaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgt 22234865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 7214573 - 7214533
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatg 82  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  7214573 taataatttgagaaaatcacataatttaatgtaattatatg 7214533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 10499311 - 10499279
Alignment:
Q  52 agaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||||||||||||||||||||||    
T  10499311 agaaaatcacataatttagtgtaattatatgtg 10499279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 5414217 - 5414147
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatg--tgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||||||| |||  ||||||||||||||  | ||||||||||| |||| |||||| ||||||||    
T  5414217 ttttagaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacgacacgtgt 5414147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 17876166 - 17876205
Alignment:
Q  45 taattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  17876166 taattttagaaaatgacataatttagtgtaatcatatgtg 17876205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 44132689 - 44132619
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    |||||||||||||| ||||| ||| ||||||||||||  |||||||||| ||||| | |||||||| ||||    
T  44132689 ttttagaaaatcacgtaattcagtataattatatgtgtcggtgtcgtgttggtgtcgaacacaacatgtgt 44132619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 999399 - 999357
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| || |||||| |||||||||||||||||||||||    
T  999399 taataatttgagtaaatcatataatttagtgtaattatatgtg 999357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 3731208 - 3731250
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  3731208 cgttgataatttgagaaaatcacataatttagggtaattatat 3731250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 15659811 - 15659754
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcgg 97  Q
    ||||||||| |||||||| |||||||  |||||||||||||||  |||||||||||||    
T  15659811 taataatttgagaaaatctcataattcggtgtaattatatgtgttggtgtcgtgtcgg 15659754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 76
Target Start/End: Original strand, 17446079 - 17446113
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaat 76  Q
    ||||||||| |||||||||||||||||||||||||    
T  17446079 taataatttaagaaaatcacataatttagtgtaat 17446113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 33950144 - 33950186
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||| |||||||||||||||||| |||||| |||||||    
T  33950144 taataatttgagaaaatcacataatttaatgtaatcatatgtg 33950186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 40179697 - 40179647
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatg 82  Q
    |||||||| |||||| ||| | |||||||||||||| ||||||||||||||    
T  40179697 ttgacaccattaatagtttgaaaaaatcacataattcagtgtaattatatg 40179647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 48139264 - 48139314
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  48139264 gacactgttaataatttgagataatctcataatttaatgtaattatatgtg 48139314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 2234232 - 2234308
Alignment:
Q  15 cacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgt 92  Q
    |||||||||||||| | | | ||||||| ||||||| |||||||||||||||| | ||||||||| |||  |||||||    
T  2234232 cacagatactgacacgct-gtcaccgttgataatttgagaaaatcacataattcaatgtaattatgtgtcagtgtcgt 2234308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 4099960 - 4100038
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtg---taattatatgtg--ggtgtcgtgtcggtgttggaca 106  Q
    ||||||| |||| ||||| ||| |||||||||||||||||   ||||||||||||  ||||||||||| |||| |||||    
T  4099960 tgacaccattaaaaatttgagacaatcacataatttagtgtaataattatatgtgtcggtgtcgtgtctgtgtcggaca 4100038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 6485663 - 6485626
Alignment:
Q  41 ttaataattttagaaaatcacataatttagtgtaatta 78  Q
    |||||||||| | |||||||||||||||||||||||||    
T  6485663 ttaataatttgaaaaaatcacataatttagtgtaatta 6485626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 16189710 - 16189759
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||| ||| ||||| |||||||||||||||| ||||||||||| ||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtg 16189759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 17344513 - 17344550
Alignment:
Q  47 attttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  17344513 atttaagaaaatcacataatttaatgtaattatatgtg 17344550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 19482676 - 19482752
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| | || |||||||||||  ||||||||| | |||  |||||||||||||| |||||||| ||||||||    
T  19482676 taataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcgtgtcggtattggacacgacacgtgt 19482752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 24343515 - 24343569
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtcggtgt 100  Q
    ||||||||| ||||||| |||||||| ||||||||||||    ||||||||||||||||    
T  24343515 taataatttgagaaaattacataattcagtgtaattata----ggtgtcgtgtcggtgt 24343569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 27706229 - 27706192
Alignment:
Q  41 ttaataattttagaaaatcacataatttagtgtaatta 78  Q
    |||||||||| | |||||||||||||||||||||||||    
T  27706229 ttaataatttaaaaaaatcacataatttagtgtaatta 27706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 44081631 - 44081586
Alignment:
Q  39 cgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    |||||||||||| | ||||||| |||||||| ||||||||||||||    
T  44081631 cgttaataatttgaaaaaatcatataatttaatgtaattatatgtg 44081586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 56257941 - 56257994
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtgggtgtcgtgtc 95  Q
    ||||||||| ||||||||| |||||| ||||||||||| |||  ||||||||||    
T  56257941 taataatttgagaaaatcatataattcagtgtaattatgtgtctgtgtcgtgtc 56257994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 9996849 - 9996889
Alignment:
Q  43 aataattttagaaaatcacataatttagtgtaattatatgt 83  Q
    |||||||| |||||||||||||||| ||| |||||||||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgt 9996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 18576086 - 18576046
Alignment:
Q  44 ataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||| ||||||||||||||||  |||||||||||||||    
T  18576086 ataatttgagaaaatcacataattcggtgtaattatatgtg 18576046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 25829 - 25765
Alignment:
Q  32 ttgacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgt 94  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||||||  ||| ||||||||||    
T  25829 ttgacacggttaataattagagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 1035 - 1114
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg--gtgtcgtgtcggtgttggacacaaca 111  Q
    ||||||| ||||||||| | ||||| |||||||| ||||||| ||||||||   |||| |||||||||||||||||||||    
T  1035 gacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaaca 1114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 53189 - 53264
Alignment:
Q  43 aataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    |||||||| |||||||||||||||| ||||||||||||  ||| |||| ||||||||||| |||||  ||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgt 53264  T

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Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 99893 - 99956
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtc 95  Q
    ||||||| ||||||||||||||||| |||||||| | ||||||||||||||  |||||||||||    
T  99893 gacaccgataataattttagaaaataacataattcaatgtaattatatgtgttggtgtcgtgtc 99956  T

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Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 90844 - 90890
Alignment:
Q  35 acaccgttaataattttagaaaatcacataatttagtgtaattatat 81  Q
    ||||| |||||||||| ||||||||| |||||| |||||||||||||    
T  90844 acaccattaataatttgagaaaatcatataattcagtgtaattatat 90890  T

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Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 263423 - 263341
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacacgtgtttgata 122  Q
    ||||||||| |||||| ||||||||| ||||||||||||  |||  |||||||||||||||  ||||| ||||||||| ||||    
T  263423 taataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgttcgata 263341  T

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Target: scaffold0110 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 28850 - 28900
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 84  Q
    ||||||||||||||||| |||||||| ||||||| | ||||||||||||||    
T  28850 gacaccgttaataatttaagaaaatcgcataattcaatgtaattatatgtg 28900  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 68299 - 68222
Alignment:
Q  36 caccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaaca 111  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||  |||  ||||||| ||||||| | ||||||||    
T  68299 caccgttaataatttgagaaaatcatataatttagtataattataggtgtcagtgtcgtatcggtgtcgaacacaaca 68222  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 9798 - 9738
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgt 100  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||  |||||||||| |||||    
T  9798 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgt 9738  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 241614 - 241678
Alignment:
Q  54 aaaatcacataatttagtgtaattat--atgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||||||||||||||||||   ||| |||||||||| ||||| |||||| ||||||||    
T  241614 aaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgt 241678  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 135363 - 135308
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtc 95  Q
    ||||||||| ||||||||||||||||  |||||||||||||||  |||||||||||    
T  135363 taataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtc 135308  T

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Target: scaffold0623 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 6041 - 5971
Alignment:
Q  48 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||||||||| |||  ||||||||||||||||  |||||||| ||||||| | |||| ||||||||    
T  6041 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtatcggtgtcgaacacgacacgtgt 5971  T

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Target: scaffold0697 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 1644 - 1690
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata 80  Q
    ||||||||||||||||| ||||||||| ||||||| || ||||||||    
T  1644 gacaccgttaataatttgagaaaatcatataatttggtataattata 1690  T

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Target: scaffold0168 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 21042 - 21111
Alignment:
Q  33 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgtcgtgtcggtgt 100  Q
    |||||| ||||||||||| |||||||||||||| |  || ||||||||||||  ||| ||||||||||||    
T  21042 tgacacggttaataatttgagaaaatcacataagtcggtataattatatgtgtcggtatcgtgtcggtgt 21111  T

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Target: scaffold0279 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 17903 - 17855
Alignment:
Q  70 gtgtaattatatgtg--ggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    |||||||||||||||  |||||||| |||||||||||||| ||||||||    
T  17903 gtgtaattatatgtgacggtgtcgtatcggtgttggacacgacacgtgt 17855  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 3908 - 3828
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgtcgtgtcggtgttggacacaacac 112  Q
    ||||| ||||||||||| | |||||||||||||| |||||||||| |  |||  ||||||||| ||||| |||||| ||||    
T  3908 gacacggttaataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacac 3828  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 46682 - 46726
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  46682 gacacagttaataatttgaaaaaatcacataattcagtgtaatta 46726  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 71745 - 71809
Alignment:
Q  54 aaaatcacataatttagtgtaatta-ta-tgtgggtgtcgtgtcggtgttggacacaacacgtgt 116  Q
    ||||||||| |||| |||||||||| || |||  ||||||||||||||| |||||||||||||||    
T  71745 aaaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtgt 71809  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 192308 - 192264
Alignment:
Q  34 gacaccgttaataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||||||||||| ||||||| ||||||||  |||||||||    
T  192308 gacaccgttaataatttgagaaaattacataattcggtgtaatta 192264  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 17800 - 17764
Alignment:
Q  42 taataattttagaaaatcacataatttagtgtaatta 78  Q
    ||||||||| | |||||||||||||||||||||||||    
T  17800 taataatttgaaaaaatcacataatttagtgtaatta 17764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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