View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0942_low_19 (Length: 531)

Name: NF0942_low_19
Description: NF0942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0942_low_19
NF0942_low_19
[»] scaffold0234 (4 HSPs)
scaffold0234 (18-225)||(2321-2528)
scaffold0234 (18-225)||(11212-11419)
scaffold0234 (261-318)||(2564-2621)
scaffold0234 (261-318)||(11455-11512)
[»] chr4 (52 HSPs)
chr4 (18-225)||(19926760-19926967)
chr4 (18-225)||(26970463-26970670)
chr4 (18-225)||(55612683-55612890)
chr4 (18-225)||(5707320-5707527)
chr4 (18-225)||(26963640-26963847)
chr4 (18-225)||(5713948-5714155)
chr4 (18-225)||(10621333-10621540)
chr4 (18-225)||(868597-868804)
chr4 (18-225)||(10628412-10628619)
chr4 (18-223)||(18262214-18262419)
chr4 (18-223)||(28393134-28393339)
chr4 (18-223)||(4426604-4426808)
chr4 (18-223)||(18269070-18269280)
chr4 (18-213)||(8845215-8845410)
chr4 (18-213)||(8858179-8858374)
chr4 (337-511)||(22339490-22339664)
chr4 (110-225)||(12357136-12357251)
chr4 (18-217)||(20311299-20311499)
chr4 (18-219)||(10677555-10677753)
chr4 (18-219)||(10891195-10891393)
chr4 (18-219)||(5668125-5668327)
chr4 (19-223)||(5616215-5616421)
chr4 (18-219)||(35223576-35223767)
chr4 (261-318)||(5713855-5713912)
chr4 (261-318)||(26963547-26963604)
chr4 (261-318)||(26970370-26970427)
chr4 (261-317)||(19927003-19927059)
chr4 (261-318)||(10621576-10621633)
chr4 (261-317)||(5707228-5707284)
chr4 (261-317)||(12357044-12357100)
chr4 (261-315)||(868507-868561)
chr4 (261-317)||(10628655-10628711)
chr4 (261-317)||(17142372-17142428)
chr4 (261-317)||(55612594-55612650)
chr4 (263-317)||(28393380-28393434)
chr4 (383-461)||(50882036-50882114)
chr4 (261-318)||(18268975-18269032)
chr4 (261-317)||(4426847-4426903)
chr4 (383-461)||(16635416-16635494)
chr4 (18-199)||(21454137-21454319)
chr4 (109-176)||(39074278-39074346)
chr4 (261-310)||(55992680-55992729)
chr4 (26-187)||(56516094-56516255)
chr4 (261-302)||(5668371-5668412)
chr4 (261-309)||(8845118-8845166)
chr4 (261-309)||(8858082-8858130)
chr4 (261-301)||(18262136-18262176)
chr4 (36-88)||(39074218-39074270)
chr4 (116-175)||(11161913-11161972)
chr4 (261-315)||(20311207-20311261)
chr4 (19-187)||(30040750-30040919)
chr4 (261-309)||(24699958-24700006)
[»] chr1 (28 HSPs)
chr1 (18-225)||(18252030-18252237)
chr1 (18-225)||(18532514-18532721)
chr1 (18-225)||(27131409-27131616)
chr1 (18-223)||(21171233-21171438)
chr1 (18-223)||(27310577-27310782)
chr1 (18-223)||(16359035-16359240)
chr1 (18-219)||(36816633-36816834)
chr1 (18-225)||(3855919-3856126)
chr1 (18-225)||(22657221-22657429)
chr1 (18-219)||(27277557-27277756)
chr1 (18-191)||(12006539-12006712)
chr1 (18-191)||(12014284-12014457)
chr1 (261-317)||(18251936-18251992)
chr1 (261-317)||(18532757-18532813)
chr1 (18-213)||(9917918-9918106)
chr1 (261-317)||(27310821-27310877)
chr1 (261-317)||(16359280-16359336)
chr1 (261-318)||(21171479-21171536)
chr1 (397-461)||(7589224-7589288)
chr1 (264-318)||(36816881-36816935)
chr1 (261-318)||(3856164-3856221)
chr1 (265-318)||(22657469-22657522)
chr1 (150-219)||(30720625-30720694)
chr1 (261-317)||(27131652-27131704)
chr1 (359-461)||(24067860-24067962)
chr1 (118-195)||(3403248-3403325)
chr1 (118-195)||(3443494-3443571)
chr1 (261-317)||(27277800-27277856)
[»] chr7 (28 HSPs)
chr7 (18-225)||(29327784-29327991)
chr7 (18-225)||(11536062-11536269)
chr7 (18-225)||(11542980-11543187)
chr7 (18-223)||(15152445-15152650)
chr7 (18-223)||(15148144-15148349)
chr7 (18-223)||(18561009-18561214)
chr7 (18-223)||(12750828-12751033)
chr7 (22-219)||(12738542-12738739)
chr7 (18-223)||(18257842-18258047)
chr7 (37-219)||(13392157-13392338)
chr7 (18-203)||(2364917-2365101)
chr7 (261-318)||(11543223-11543280)
chr7 (261-317)||(2653275-2653331)
chr7 (33-192)||(7396221-7396381)
chr7 (261-317)||(12738443-12738499)
chr7 (35-219)||(39111819-39112002)
chr7 (261-318)||(11536305-11536362)
chr7 (261-318)||(12750732-12750789)
chr7 (261-318)||(15152349-15152406)
chr7 (262-318)||(29327689-29327745)
chr7 (261-317)||(15148049-15148105)
chr7 (262-318)||(13392029-13392085)
chr7 (108-151)||(3132748-3132791)
chr7 (110-175)||(10234179-10234244)
chr7 (261-317)||(18258087-18258143)
chr7 (193-225)||(2653207-2653239)
chr7 (261-317)||(18560913-18560969)
chr7 (397-461)||(7157465-7157529)
[»] chr3 (54 HSPs)
chr3 (18-225)||(6110064-6110271)
chr3 (18-225)||(10572592-10572799)
chr3 (18-223)||(16482483-16482688)
chr3 (18-219)||(17781118-17781319)
chr3 (18-225)||(15600884-15601091)
chr3 (18-225)||(15607429-15607636)
chr3 (18-223)||(18522665-18522870)
chr3 (18-222)||(13211305-13211509)
chr3 (18-225)||(13248607-13248814)
chr3 (18-225)||(15357586-15357793)
chr3 (18-219)||(10579355-10579556)
chr3 (18-223)||(18519980-18520182)
chr3 (18-219)||(19089745-19089946)
chr3 (18-225)||(8490488-8490702)
chr3 (18-223)||(17200184-17200389)
chr3 (18-206)||(15342219-15342407)
chr3 (18-223)||(13516813-13517018)
chr3 (64-225)||(18640792-18640953)
chr3 (18-219)||(32056900-32057101)
chr3 (18-219)||(1647521-1647726)
chr3 (37-223)||(16200128-16200313)
chr3 (33-225)||(29924971-29925163)
chr3 (33-225)||(29974124-29974316)
chr3 (37-223)||(16200434-16200619)
chr3 (18-218)||(24253388-24253589)
chr3 (18-119)||(17136465-17136566)
chr3 (161-223)||(18534758-18534820)
chr3 (261-318)||(6109971-6110028)
chr3 (261-318)||(13248514-13248571)
chr3 (261-317)||(8490396-8490452)
chr3 (261-319)||(13211209-13211267)
chr3 (261-317)||(18640989-18641045)
chr3 (261-317)||(17136137-17136193)
chr3 (267-317)||(10579603-10579653)
chr3 (261-318)||(15607672-15607730)
chr3 (261-318)||(15351237-15351294)
chr3 (261-318)||(15357829-15357886)
chr3 (261-318)||(17200427-17200484)
chr3 (178-223)||(18510924-18510969)
chr3 (261-317)||(16482727-16482782)
chr3 (261-317)||(18519885-18519941)
chr3 (267-318)||(10572840-10572891)
chr3 (261-319)||(13516717-13516775)
chr3 (261-318)||(15601127-15601185)
chr3 (261-318)||(17781358-17781415)
chr3 (261-318)||(19089985-19090042)
chr3 (261-317)||(1647768-1647824)
chr3 (261-317)||(32057144-32057200)
chr3 (358-461)||(23046330-23046433)
chr3 (261-318)||(18510828-18510885)
chr3 (261-318)||(18522569-18522626)
chr3 (261-318)||(18534662-18534719)
chr3 (261-317)||(29924879-29924935)
chr3 (261-317)||(29974032-29974088)
[»] scaffold0390 (4 HSPs)
scaffold0390 (18-225)||(6934-7141)
scaffold0390 (18-225)||(13950-14157)
scaffold0390 (261-318)||(7177-7234)
scaffold0390 (261-317)||(14193-14249)
[»] chr8 (20 HSPs)
chr8 (18-225)||(21940665-21940872)
chr8 (18-223)||(22171491-22171694)
chr8 (18-219)||(6094129-6094330)
chr8 (24-223)||(28554885-28555084)
chr8 (18-219)||(24642655-24642856)
chr8 (92-219)||(24636860-24636987)
chr8 (261-317)||(21940573-21940629)
chr8 (261-317)||(22070108-22070164)
chr8 (21-213)||(38232380-38232570)
chr8 (261-318)||(22171395-22171452)
chr8 (265-318)||(24642555-24642608)
chr8 (261-317)||(6094031-6094087)
chr8 (34-195)||(32872857-32873019)
chr8 (261-318)||(28554790-28554847)
chr8 (383-461)||(40755860-40755938)
chr8 (21-204)||(2375027-2375208)
chr8 (124-187)||(10920234-10920297)
chr8 (18-129)||(14983920-14984030)
chr8 (264-318)||(2374946-2375000)
chr8 (280-317)||(24636605-24636642)
[»] chr6 (30 HSPs)
chr6 (18-225)||(29308890-29309097)
chr6 (18-225)||(29315850-29316057)
chr6 (18-223)||(16566320-16566525)
chr6 (18-225)||(27381252-27381459)
chr6 (18-225)||(27471635-27471842)
chr6 (18-223)||(17684469-17684674)
chr6 (18-225)||(17691440-17691647)
chr6 (18-223)||(188977-189182)
chr6 (18-223)||(25537159-25537364)
chr6 (18-223)||(11651725-11651930)
chr6 (18-223)||(13359269-13359474)
chr6 (18-186)||(20553587-20553755)
chr6 (261-315)||(17691683-17691737)
chr6 (261-318)||(27381495-27381552)
chr6 (261-318)||(27471878-27471935)
chr6 (261-318)||(29308797-29308854)
chr6 (261-318)||(29315757-29315814)
chr6 (18-202)||(27925772-27925961)
chr6 (33-206)||(8509941-8510115)
chr6 (261-318)||(17684712-17684769)
chr6 (18-187)||(17850495-17850663)
chr6 (263-317)||(11651630-11651684)
chr6 (261-318)||(25537405-25537462)
chr6 (19-187)||(20736604-20736773)
chr6 (163-218)||(31258065-31258120)
chr6 (261-318)||(13359512-13359569)
chr6 (261-309)||(16566563-16566611)
chr6 (261-317)||(189221-189280)
chr6 (261-303)||(16394484-16394526)
chr6 (144-209)||(22259925-22259990)
[»] chr2 (16 HSPs)
chr2 (18-225)||(21330248-21330455)
chr2 (18-225)||(18796506-18796713)
chr2 (18-223)||(18619807-18620011)
chr2 (80-219)||(19692598-19692737)
chr2 (33-160)||(20977957-20978084)
chr2 (18-191)||(36270199-36270373)
chr2 (261-317)||(21330493-21330549)
chr2 (18-191)||(18822115-18822290)
chr2 (383-461)||(23689061-23689139)
chr2 (261-318)||(19692773-19692830)
chr2 (34-189)||(36802664-36802820)
chr2 (18-105)||(12098618-12098705)
chr2 (18-105)||(18852059-18852146)
chr2 (33-183)||(24471643-24471792)
chr2 (18-87)||(22183483-22183552)
chr2 (261-318)||(18796411-18796470)
[»] scaffold0220 (2 HSPs)
scaffold0220 (18-225)||(18288-18495)
scaffold0220 (261-317)||(18196-18252)
[»] scaffold0433 (2 HSPs)
scaffold0433 (18-225)||(7107-7314)
scaffold0433 (261-318)||(7014-7071)
[»] chr5 (21 HSPs)
chr5 (18-225)||(24695466-24695673)
chr5 (18-225)||(18569863-18570070)
chr5 (18-223)||(19714498-19714703)
chr5 (18-219)||(19707218-19707419)
chr5 (37-220)||(27347497-27347679)
chr5 (18-219)||(22547016-22547217)
chr5 (116-225)||(39537962-39538071)
chr5 (40-221)||(17285754-17285935)
chr5 (18-159)||(18807034-18807175)
chr5 (40-221)||(17298907-17299088)
chr5 (261-318)||(24695709-24695766)
chr5 (20-112)||(39538701-39538793)
chr5 (116-219)||(31886537-31886640)
chr5 (261-317)||(19714742-19714798)
chr5 (261-318)||(19707462-19707519)
chr5 (261-317)||(27347722-27347778)
chr5 (109-199)||(33477389-33477479)
chr5 (261-318)||(18570108-18570165)
chr5 (262-317)||(39537870-39537925)
chr5 (383-461)||(19183638-19183716)
chr5 (107-175)||(11479420-11479489)
[»] scaffold0657 (2 HSPs)
scaffold0657 (18-225)||(993-1200)
scaffold0657 (261-317)||(901-957)
[»] scaffold0186 (2 HSPs)
scaffold0186 (18-225)||(25990-26197)
scaffold0186 (262-318)||(26231-26287)
[»] scaffold0063 (2 HSPs)
scaffold0063 (18-223)||(5531-5736)
scaffold0063 (261-318)||(5435-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (42-223)||(230365-230545)
scaffold0008 (261-317)||(230584-230640)
[»] scaffold0176 (2 HSPs)
scaffold0176 (161-225)||(8446-8510)
scaffold0176 (261-318)||(8546-8603)
[»] scaffold0203 (1 HSPs)
scaffold0203 (261-318)||(23769-23826)
[»] scaffold0326 (2 HSPs)
scaffold0326 (261-318)||(16522-16579)
scaffold0326 (192-225)||(16615-16648)
[»] scaffold0705 (1 HSPs)
scaffold0705 (261-318)||(41-98)
[»] scaffold0637 (1 HSPs)
scaffold0637 (261-317)||(8944-9000)
[»] scaffold0565 (2 HSPs)
scaffold0565 (261-315)||(10202-10256)
scaffold0565 (175-206)||(10127-10158)
[»] scaffold0767 (1 HSPs)
scaffold0767 (281-317)||(1-37)
[»] scaffold0267 (1 HSPs)
scaffold0267 (385-461)||(8615-8691)
[»] scaffold0170 (1 HSPs)
scaffold0170 (265-318)||(5877-5930)
[»] scaffold0650 (1 HSPs)
scaffold0650 (383-458)||(6516-6591)
[»] scaffold0032 (1 HSPs)
scaffold0032 (124-196)||(92194-92267)
[»] scaffold0453 (1 HSPs)
scaffold0453 (397-461)||(9396-9460)


Alignment Details
Target: scaffold0234 (Bit Score: 208; Significance: 1e-113; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 2321 - 2528
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2321 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 2420  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2421 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 2520  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  2521 tgccttgt 2528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 11212 - 11419
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11212 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 11311  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11312 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 11411  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  11412 tgccttgt 11419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 2564 - 2621
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2564 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 2621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 11455 - 11512
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11455 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 11512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 208; Significance: 1e-113; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 19926760 - 19926967
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926760 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 19926859  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926860 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 19926959  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  19926960 tgccttgt 19926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 26970670 - 26970463
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26970670 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaatcttgactacggatactttgagaatagtttccttatgttt 26970571  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970570 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 26970471  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  26970470 tgccttgt 26970463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 55612890 - 55612683
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  55612890 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagagtagtttccttatgttt 55612791  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612790 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 55612691  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  55612690 tgccttgt 55612683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 5707527 - 5707320
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5707527 atcatcagtctacctacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 5707428  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5707427 aatggggtctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 5707328  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  5707327 tgccttgt 5707320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 26963847 - 26963640
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26963847 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaatcttgactacggatactttgagaatagtttccttatgttt 26963748  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963747 aatggggtctcacaattaagttatatttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 26963648  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  26963647 tgccttgt 26963640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 5714155 - 5713948
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5714155 atcatcagtctacctacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 5714056  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5714055 aatggggtctcacaattaagttatacttaatgttccattaaatgggctaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 5713956  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  5713955 tgccttgt 5713948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 10621333 - 10621540
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10621333 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttgagaatagtttccttatgttt 10621432  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10621433 aatgggctctcacaattaagttatacttaatgttccattaaacggactaactattccagggactttattattttgaaacaaaacaaaatcaataaagaaa 10621532  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  10621533 tgccttgt 10621540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 868804 - 868597
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  868804 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 868705  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  868704 aacggggtctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 868605  T
Q  218 tgccttgt 225  Q
    || |||||    
T  868604 tgtcttgt 868597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 10628412 - 10628619
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10628412 atcatcagtctacctacataatagtctctatgctttaataatatcccacttctcaataaagcttgactacagatactttgagaatagtttccttatgttt 10628511  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10628512 aatgggctctcacaattaagttatacttaatgttccattaaacggactaactattccagggactttattattttgaaacaaaacaaaatcaataaagaaa 10628611  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  10628612 tgccttgt 10628619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 18262419 - 18262214
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  18262419 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcatcaaagcttgactacggatactttgagaatagtttccttatgttt 18262320  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18262319 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacgaaacaaaatcaataaagaaa 18262220  T
Q  218 tgcctt 223  Q
    ||||||    
T  18262219 tgcctt 18262214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 28393134 - 28393339
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  28393134 atcatcagtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaagaatagtttccttatgttt 28393233  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  28393234 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattttagggactttattattttgaaacaaatcaaaatcaataaagaaa 28393333  T
Q  218 tgcctt 223  Q
    ||||||    
T  28393334 tgcctt 28393339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 4426604 - 4426808
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  4426604 atcatcagtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtt-ccttatgttt 4426702  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4426703 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaa 4426802  T
Q  218 tgcctt 223  Q
    ||||||    
T  4426803 tgcctt 4426808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 18269280 - 18269070
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  18269280 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcatcaaagcttgactacggatactttgagaatagtttccttatgttt 18269181  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaac-----aaaatcaataa 212  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||    
T  18269180 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaacaaaatcaataa 18269081  T
Q  213 agaaatgcctt 223  Q
    |||||||||||    
T  18269080 agaaatgcctt 18269070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 8845410 - 8845215
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8845410 atcatcagcctacccacataatagtctctatgctttaatgatatccgacttctcaataaagcttgactacggatactttaagaatagtttccttatgttt 8845311  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 213  Q
    || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8845310 aacgggatctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 8845215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 8858374 - 8858179
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8858374 atcatcagcctacccacataatagtctctatgctttaatgatatccgacttctcaataaagcttgactacggatactttaagaatagtttccttatgttt 8858275  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 213  Q
    || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8858274 aacgggatctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 8858179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 337 - 511
Target Start/End: Complemental strand, 22339664 - 22339490
Alignment:
Q  337 gtatgaacttgcatcaaaatggtgataacacttaagatgtattaccattttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaag 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||    
T  22339664 gtatgaacttgcatcaaaatggtgataacacttaagatgtattaccattttagctcgatttacacatgttttgatctcgattttatagatccttgcaaag 22339565  T
Q  437 ttatgctgattttgtgtgtctatttgatgaaaaagggcgnnnnnnnggaagaaaatacaaatcccaacttgtctt 511  Q
    ||||||||||||||| ||||||||||||||||||| |||       |||||||||||||||||||| ||||||||    
T  22339564 ttatgctgattttgtatgtctatttgatgaaaaagtgcgaaaaaaaggaagaaaatacaaatcccagcttgtctt 22339490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 110 - 225
Target Start/End: Complemental strand, 12357251 - 12357136
Alignment:
Q  110 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357251 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 12357152  T
Q  210 taaagaaatgccttgt 225  Q
    ||||||||||||||||    
T  12357151 taaagaaatgccttgt 12357136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 217
Target Start/End: Complemental strand, 20311499 - 20311299
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||||||||||||| ||  ||||||| | || ||| |||||||||||    
T  20311499 atcatcaatctacccacaaaatagtctctatgctttaatgatatctcacttcacaataaagcttgacaacaaatactttaaaaacagtgtccttatgttt 20311400  T
Q  118 aatggggtctcacaattaagttata-cttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaa 216  Q
    ||||||||||||||||||||||||| ||||||| |||||| |||  | |||||||| || | ||||||||||||| ||||||||||||||||||||||||    
T  20311399 aatggggtctcacaattaagttataccttaatgctccattgaacatattaactattataagtactttattattttaaaacaaaacaaaatcaataaagaa 20311300  T
Q  217 a 217  Q
    |    
T  20311299 a 20311299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 10677555 - 10677753
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| |||||||||||| ||| |||||||| |||| || ||| |  ||||||||||||||||||||||| |||||| | || ||  ||||    
T  10677555 atcatcagtctacccacataatagtctatatactttaatgttatctcatttcac--taaagcttgactacggatactttaagaataatatcatttcgttt 10677652  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||| |||| | ||||||| |||||||||| ||||||| || |||||| |||| ||||| ||||||| | ||||||||||| |||||||||||| |||    
T  10677653 aatggg-tctcgcgattaagtcatacttaatgctccattatacagactaattattttaggggctttattttattgaaacaaaagaaaatcaataaaaaaa 10677751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 10891195 - 10891393
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| |||||||||||| ||| |||||||| |||| || ||| |  ||||||||||||||||||||||| |||||| | || ||  ||||    
T  10891195 atcatcagtctacccacataatagtctatatactttaatgttatctcatttcac--taaagcttgactacggatactttaagaataatatcatttcgttt 10891292  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||| |||| | ||||||| |||||||||| ||||||| || |||||| |||| ||||| ||||||| | ||||||||||| |||||||||||| |||    
T  10891293 aatggg-tctcgcgattaagtcatacttaatgctccattatacagactaattattttaggggctttattttattgaaacaaaagaaaatcaataaaaaaa 10891391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 5668125 - 5668327
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggata--ctttgagaatagtttccttatgt 115  Q
    |||||| ||||| | ||||||||||||||||| ||||||| |||| |  ||| |||||||||||||||||  |||  |||| |||||| | |||||   |    
T  5668125 atcatcggtctatccacataatagtctctatgatttaatgttatctcttttcacaataaagcttgactacaaatatactttaagaataatgtcctttcat 5668224  T
Q  116 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaaga 215  Q
    |||||||| |||||| ||||| | | |||||||| |||||||||  |||||| |||||||| |||||||||||||||||||||||||||||||| |||||    
T  5668225 ttaatggg-tctcacgattaaatcacacttaatgctccattaaatagactaattattctagagactttattattttgaaacaaaacaaaatcaacaaaga 5668323  T
Q  216 aatg 219  Q
    ||||    
T  5668324 aatg 5668327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 5616421 - 5616215
Alignment:
Q  19 tcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagc--ttgactacggatactttgagaatagtttccttatgtt 116  Q
    |||||| ||||| |||||||||||||| |||||||| | |||||||| |||  |||||| |  ||||| ||||||||||| |||||| | ||||   |||    
T  5616421 tcatcaatctacatacataatagtctcaatgctttattaatatcccaattcataataaaacctttgacaacggatactttaagaataatgtcctctagtt 5616322  T
Q  117 taatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaa 216  Q
    ||| ||| |||||  ||| ||| | |||||||||||||  |||  |||||| |||| |||| |||||||||||||||||||||||||||| |||||||||    
T  5616321 taacgggatctcatgatttagtcagacttaatgttccaagaaatagactaattattttaggaactttattattttgaaacaaaacaaaatgaataaagaa 5616222  T
Q  217 atgcctt 223  Q
    |||||||    
T  5616221 atgcctt 5616215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 35223767 - 35223576
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||| ||||||| |||||||||||| |||||||||||| |||||   ||  |||||||||||||||||| ||||||| |||||| | |||||  ||||    
T  35223767 atcatccgtctacccacataatagtctatatgctttaatgttatccttttttacaataaagcttgactacgaatactttaagaataatgtcctttcgttt 35223668  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
     | |          ||||||| | |||||||| |||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  35223667 tacg----------attaagtcacacttaatgctccattaaacagactaattattctagggactttattattttaaaacaaaacaaaatcaacaaagaaa 35223578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 5713912 - 5713855
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5713912 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 5713855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 26963604 - 26963547
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963604 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 26963547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 26970427 - 26970370
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970427 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 26970370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 19927003 - 19927059
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19927003 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 19927059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 10621576 - 10621633
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10621576 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaacaa 10621633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 5707284 - 5707228
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5707284 catgatacaaagccaaacacaatcaatatagattggctattagggcttattccaaca 5707228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 12357100 - 12357044
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12357100 catgatacaaagccaaatccaatcaatatagattggctattagggcttattccaaca 12357044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 868561 - 868507
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  868561 catgatacaaagccaaacccaatcaatatagattggctattagggtttattccaa 868507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 10628655 - 10628711
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  10628655 catgatacaaagtcaaaaccaatcaatatagattggctattagggcttattccaaca 10628711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 17142372 - 17142428
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  17142372 catgatacaaagtcaaacccaatcaatatagattggctattagggctttttccaaca 17142428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 55612650 - 55612594
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  55612650 catgatacaaagccaaacccaatcaatatagattggttattagggcttattctaaca 55612594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 28393380 - 28393434
Alignment:
Q  263 tgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  28393380 tgatacaaagtcaaacccaatcaatatagattggctattagggcttactccaaca 28393434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 461
Target Start/End: Complemental strand, 50882114 - 50882036
Alignment:
Q  383 attttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 461  Q
    ||||||||| ||| || |||||||||||||||||||||||||||  |||||| ||||||||| | ||||||||||||||    
T  50882114 attttagctcgacttatacatgttttgatctcgattttatagatttttgcaatgttatgctggtattgtgtgtctattt 50882036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 18269032 - 18268975
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||    
T  18269032 catgatacaaagccaaacccattcaacatagattggctatttgggcttattccaacaa 18268975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 4426847 - 4426903
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||    
T  4426847 catgatacagagccaaacccaatcaatatagattggctattaggacttactccaaca 4426903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 461
Target Start/End: Original strand, 16635416 - 16635494
Alignment:
Q  383 attttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 461  Q
    ||||||||| ||| ||||||| ||||||||||||||||||||||  |||||| ||||||||| | ||| ||||||||||    
T  16635416 attttagctcgacttacacattttttgatctcgattttatagatttttgcaatgttatgctggtattgcgtgtctattt 16635494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 21454137 - 21454319
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||| |||||  |||||||| ||| ||||| ||| || |||| || ||| |||||||| |||||||  |||| ||| | |||| | || ||||  ||    
T  21454137 atcatcaatctactcacataataatctttatgcattattgttatctcatttcacaataaagtttgactatagatattttaaaaataatgtcattataatt 21454236  T
Q  118 aatggggtctcacaattaagttatactt-aatgttccattaaacggactaactattctagggactttattattttgaaacaaa 199  Q
    ||||||||||||  ||||||| | | || ||||||||||||| |  ||||||||||||| | ||||||||| |||||||||||    
T  21454237 aatggggtctcaatattaagtcacattttaatgttccattaatcaaactaactattctaagaactttattactttgaaacaaa 21454319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 39074278 - 39074346
Alignment:
Q  109 cttatgtttaatggggtctcacaattaagttatacttaatgttcca-ttaaacggactaactattctag 176  Q
    |||||||||||||||||||||  ||||||| ||||||||||||| | ||||||||||||| ||||||||    
T  39074278 cttatgtttaatggggtctcatgattaagtcatacttaatgttcaatttaaacggactaattattctag 39074346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 55992729 - 55992680
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttat 310  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  55992729 catgatacaaagtcaaacccaatcaatacaaattggctattagggcttat 55992680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 187
Target Start/End: Complemental strand, 56516255 - 56516094
Alignment:
Q  26 tctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagt-ttccttatgtttaatgggg 124  Q
    |||||||||||||||||||||||| ||||||  ||||    ||| ||||||||||||||||  |||||||  |||||| | |||  |||| ||||||  |    
T  56516255 tctacctacataatagtctctatgttttaatactatcgttattcacaataaagcttgactatagatacttcaagaataatgttctatatg-ttaatgaag 56516157  T
Q  125 tctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatta 187  Q
    |||||||||||||| | | |||||||| |||||  |  || | |||||||| |||||||||||    
T  56516156 tctcacaattaagtcacaattaatgtttcattactctaaccatctattctaaggactttatta 56516094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 5668371 - 5668412
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctatta 302  Q
    ||||||||||| |||||| |||||||||||||||||||||||    
T  5668371 catgatacaaaaccaaacacaatcaatatagattggctatta 5668412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 8845166 - 8845118
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggctta 309  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||| ||||    
T  8845166 catgatacaaagtcaaactcaatcaacatagattggctattaggactta 8845118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 8858130 - 8858082
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggctta 309  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||| ||||    
T  8858130 catgatacaaagtcaaactcaatcaacatagattggctattaggactta 8858082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 18262176 - 18262136
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctatt 301  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  18262176 catgatacaaagccaaacccattcaacatagattggctatt 18262136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 39074218 - 39074270
Alignment:
Q  36 taatagtctctatgctttaatgatatcccacttctcaataaagcttgactacg 88  Q
    |||||||||| |||||||||||||||| |||||| ||||||||  ||||||||    
T  39074218 taatagtctccatgctttaatgatatctcacttcacaataaagtatgactacg 39074270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 11161913 - 11161972
Alignment:
Q  116 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattcta 175  Q
    ||||||| ||||||||||||||| | ||||  ||||||||||||| || |||||||||||    
T  11161913 ttaatggagtctcacaattaagtcacactttgtgttccattaaactgattaactattcta 11161972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 20311261 - 20311207
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 315  Q
    ||||||||||||||||| ||||| |||| |||||||||||||  ||||| |||||    
T  20311261 catgatacaaagccaaatccaatgaatacagattggctattacagcttactccaa 20311207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 30040750 - 30040919
Alignment:
Q  19 tcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatac-tttgagaatagt-ttccttatgtt 116  Q
    |||||||||||  |||||||||||||| |||||||| |  ||||||| |||  | ||| |||||||||  ||||| ||| |||||||| ||| ||||| |    
T  30040750 tcatcagtctatatacataatagtctcgatgctttattattatcccaattcatattaacgcttgactatagatacatttaagaatagtgttctttatg-t 30040848  T
Q  117 taatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatta 187  Q
    |||||   |||||  ||||||| | ||||||| | | |||| ||| |||| |||||||||| |||||||||    
T  30040849 taatgtaatctcatgattaagtcacacttaatatactattacacgaactatctattctaggaactttatta 30040919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 24700006 - 24699958
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggctta 309  Q
    ||||||||||| |||||  ||||||||||||||||| |||| |||||||    
T  24700006 catgatacaaaaccaaattcaatcaatatagattggttattcgggctta 24699958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 208; Significance: 1e-113; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 18252237 - 18252030
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252237 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 18252138  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252137 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18252038  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  18252037 tgccttgt 18252030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 18532514 - 18532721
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18532514 atcatcagtctatctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 18532613  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532614 aatggggtctcacaattaagttatacttaatgttccattaaacgaactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18532713  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  18532714 tgccttgt 18532721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 27131409 - 27131616
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  27131409 atcatcagtctacctacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacaaatactttgagaatagtttccttatgttt 27131508  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131509 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 27131608  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  27131609 tgccttgt 27131616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 21171233 - 21171438
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  21171233 atcatcagtctacccacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgttc 21171332  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || |||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21171333 aacggggtctcacaattaagttatatttaatgttccatgaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaa 21171432  T
Q  218 tgcctt 223  Q
    ||||||    
T  21171433 tgcctt 21171438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 27310577 - 27310782
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||     
T  27310577 atcatcagtctacccacataatagtctctatgctttaatgatattccacttctcaataaagcttgactactgatactttaagaatagtttccttatgttc 27310676  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27310677 aacgtggtctcacaattaagttatacttaatgttccattaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaa 27310776  T
Q  218 tgcctt 223  Q
    ||||||    
T  27310777 tgcctt 27310782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 16359035 - 16359240
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||| || |||||| ||||||||||||||||||||    
T  16359035 atcatcagtctacccacataatagtctctatgctttaatgatattccatttctcaataaagcttgactagggttactttaagaatagtttccttatgttt 16359134  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16359135 aacggggtctcacaattaagttattcttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 16359234  T
Q  218 tgcctt 223  Q
    ||||||    
T  16359235 tgcctt 16359240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 36816633 - 36816834
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||||    
T  36816633 atcatcagtctatccacataatagtctctatgctttaatggtatcccacttctcaataaagcttgactatggatactttaagaataatgtccttatgttt 36816732  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || || ||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36816733 aacggagtctcacaattaatttatacttaatgttccattaaacagacgaactattctagggacttcattattttgaaacaaaacaaaatcaataaagaaa 36816832  T
Q  218 tg 219  Q
    ||    
T  36816833 tg 36816834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 3855919 - 3856126
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| || |||||||||| |||||||||| |||||||||||| |||||||| ||||||||  ||| ||| |||||| | |||||||||||    
T  3855919 atcatcagtctacccacgtaatagtctccatgctttaataatatcccacttcacaataaagtttgactacaaatattttaagaataatgtccttatgttt 3856018  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  3856019 aatggggtctcacaattaagttatacttaatgttccattaaacgggctaactattctagggactttgttattttgaaacaaaacaaaataaacaaagaaa 3856118  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  3856119 tgccttgt 3856126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 22657221 - 22657429
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||| | |||| ||||||||||||||||||||||||| || |||  |||||||||||||||  || ||||| ||||| || |||||||||||    
T  22657221 atcatcagtctatccacatgatagtctctatgctttaatgatatctcatttcagaataaagcttgactagagacactttaagaattgtgtccttatgttt 22657320  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaac-aaaatcaataaagaa 216  Q
    || |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  22657321 aaaggggtctcacaattaagttatatttaatgttccattaaacagactaactattctaggaactttattattttgaaacaaaacaaaaatcaataaagaa 22657420  T
Q  217 atgccttgt 225  Q
    ||| |||||    
T  22657421 atgtcttgt 22657429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 27277557 - 27277756
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||| ||||||| ||||||||||||||||||||||||| ||||||  ||| ||||||||| |||||||||||||||| |||||| | || ||  | ||    
T  27277557 atcatcggtctacccacataatagtctctatgctttaatgttatcccttttcacaataaagcctgactacggatactttaagaataatgtcatttcggtt 27277656  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||   |||||| | ||||||| | || ||||| ||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||| ||| |||||||    
T  27277657 aa-aaggtctcgcgattaagtcacac-taatgctccgttaaatggactaattattctagggacgttattattttgaaacaaaacaaaaacaacaaagaaa 27277754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 12006539 - 12006712
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||   |||||| | |||||| | ||||||| |||||| |||| || ||| ||||||||||| ||  ||| | |||| | |||||||||||    
T  12006539 atcatcagtctatgcacataacaatctctaagttttaatgttatccctcttcacactaaggcttgactacgaatgttttaataataatgtccttatgttt 12006638  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattatttt 191  Q
     |||||||||||| ||||||  | ||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  12006639 catggggtctcacgattaaggcacacttaatattccattaaatagactaactattctagggactttattatttt 12006712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 12014284 - 12014457
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||| |||||| ||||||| |||| || ||||||||  |||||| |||| || |||||||| |||||||||  ||| ||||||   || ||||||||    
T  12014284 atcatcattctacccacataatggtctttacgctttaatcgtatccctcttcacactaaagcttaactacggatgttttaagaataacatcattatgttt 12014383  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattatttt 191  Q
    |||||| ||| || ||||| ||| ||||||| |||||||||||||||||  |||||||| ||||||||||||||    
T  12014384 aatgggatctaacgattaatttacacttaatattccattaaacggactatgtattctagtgactttattatttt 12014457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 18251992 - 18251936
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18251992 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 18251936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 18532757 - 18532813
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532757 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 18532813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 9917918 - 9918106
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||  ||||| ||||| || ||||||||||| |||| ||||||||||  ||||||||||| ||||  |||| ||| |||||| | ||||||| |||    
T  9917918 atcatcaacctaccgacatagtattctctatgcttcaatgctatcccacttaacaataaagcttaactatagatattttaagaataatgtccttatattt 9918017  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 213  Q
    |||||  ||||   || |||||||||||||||||| |||||||  |||||       || ||||||||||||||| ||||||||||||||||||||    
T  9918018 aatgga-tctcgtgatcaagttatacttaatgttcgattaaacaaactaa------aagtgactttattattttgtaacaaaacaaaatcaataaa 9918106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 27310821 - 27310877
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  27310821 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 27310877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 16359280 - 16359336
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||| |||||||    
T  16359280 catgatacaaatcctaacccaatcaatatagattggctattagggcttactccaaca 16359336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 21171479 - 21171536
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||| ||||||||    
T  21171479 catgatacaaagccaaactcaatccatatagattggctattagagcttactccaacaa 21171536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 461
Target Start/End: Complemental strand, 7589288 - 7589224
Alignment:
Q  397 tacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 461  Q
    ||||||| ||||||||||||||||||||||  |||||| ||||||||| | ||||||||||||||    
T  7589288 tacacattttttgatctcgattttatagatttttgcaatgttatgctggtattgtgtgtctattt 7589224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 36816881 - 36816935
Alignment:
Q  264 gatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||||||||||||||||||  |||||||||||| ||| ||||    
T  36816881 gatacaaagccaaacccaatcaatatagattgaatattagggcttaatccgacaa 36816935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 3856164 - 3856221
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||| ||||||||||||| || |||||||||||||||| || ||||||||    
T  3856164 catgatacaaagtcaaacccaatcaagatggattggctattagggcctactccaacaa 3856221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 22657469 - 22657522
Alignment:
Q  265 atacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||    
T  22657469 atacaaagccaaactcaatcaatatatattggctattaaggcttactccaacaa 22657522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 30720625 - 30720694
Alignment:
Q  150 ttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 219  Q
    |||||||||||| ||||| ||||| ||| ||||||||||||| |||||||| |||| ||||||| |||||    
T  30720625 ttccattaaacgaactaattattccaggaactttattattttaaaacaaaataaaaccaataaaaaaatg 30720694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 27131652 - 27131704
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    ||||||||||||||||||||||     ||||||||||||||||||||||||||||||    
T  27131652 catgatacaaagccaaacccaac----atagattggctattagggcttattccaaca 27131704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 461
Target Start/End: Original strand, 24067860 - 24067962
Alignment:
Q  359 tgataacacttaagatgtattaccattttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtcta 458  Q
    ||||||||| ||| ||| |||||  |||||||| ||| ||||||||||||||| | ||||||| ||||  |||||  |||||| || | |||||||||||    
T  24067860 tgataacacgtaaaatgcattacttttttagctcgacttacacatgttttgattttgattttacagatttttgcattgttatgttggtattgtgtgtcta 24067959  T
Q  459 ttt 461  Q
    |||    
T  24067960 ttt 24067962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 3403325 - 3403248
Alignment:
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaa 195  Q
    |||| ||||||||| |||||| | ||||||| ||||||||| | ||||||||||| ||  |||||||||| |||||||    
T  3403325 aatgtggtctcacatttaagtcacacttaatattccattaatcagactaactattttatagactttattactttgaaa 3403248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 118 - 195
Target Start/End: Original strand, 3443494 - 3443571
Alignment:
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaa 195  Q
    |||| ||||||||| |||||| | ||||||| ||||||||| | ||||||||||| ||  |||||||||| |||||||    
T  3443494 aatgtggtctcacatttaagtcacacttaatattccattaatcagactaactattttatagactttattactttgaaa 3443571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 27277800 - 27277856
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||| |||||  ||| || |||||||||||||||||||||| |||||||    
T  27277800 catgatacaaagtcaaacataattaacatagattggctattagggcttactccaaca 27277856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 29327991 - 29327784
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327991 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 29327892  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327891 aatggggtctcacaattaagttatacttaatgttccattaaactgactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 29327792  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  29327791 tgccttgt 29327784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 11536062 - 11536269
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11536062 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgttt 11536161  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536162 aatggggtctcacaattaagttgtacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 11536261  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  11536262 tgccttgt 11536269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 11542980 - 11543187
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11542980 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgttt 11543079  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543080 aatggggtctgacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 11543179  T
Q  218 tgccttgt 225  Q
    ||| ||||    
T  11543180 tgcattgt 11543187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 15152650 - 15152445
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  15152650 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccgtatgttt 15152551  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  15152550 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggaactttattattttgaaacaaaacaaactcaataaagaaa 15152451  T
Q  218 tgcctt 223  Q
    ||||||    
T  15152450 tgcctt 15152445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 15148349 - 15148144
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  15148349 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaagaatagtttccttatgttt 15148250  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  15148249 aacggggtctcacaattaagttatacttaatgttcaatcaaacggactaactattctaggaactttattattttgaaacaaaacaaactcaataaagaaa 15148150  T
Q  218 tgcctt 223  Q
    ||||||    
T  15148149 tgcctt 15148144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 18561214 - 18561009
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  18561214 atcatcagtctacccacataatagtctctatgctttaatgatatcccacctctcaataaagcttgactacagatactttaagaatagtttcctaatgttt 18561115  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18561114 aacggggtctcacagttaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18561015  T
Q  218 tgcctt 223  Q
    ||||||    
T  18561014 tgcctt 18561009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 12751033 - 12750828
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  12751033 atcatcagtctatccacataatagtctctatgctttaatgatatccaacttctcaataaagcttgactacggatactttaagaatagtttctttatgttt 12750934  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12750933 aacgaggtctcacaattaagttatacttaatgtttcattaaacggactaactattctagggactttattactttgaaacaaaacaaaatcaataaagaaa 12750834  T
Q  218 tgcctt 223  Q
    ||||||    
T  12750833 tgcctt 12750828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 22 - 219
Target Start/End: Complemental strand, 12738739 - 12738542
Alignment:
Q  22 tcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatg 121  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||      
T  12738739 tcagtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaagaatagtttccttatgtttaaca 12738640  T
Q  122 gggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 219  Q
     |||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12738639 aggtctcacaattaagttataattaatgtttcattaaacaaactaactattctagggactttattattttgaaacaaaataaaatcaataaagaaatg 12738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 18257842 - 18258047
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||| |||| | |||||||||||| ||||| ||| || ||||| ||||  ||| ||| |||||||||||||||||| |||||| | ||||| |||||    
T  18257842 atcatcaatctatccacataatagtctttatgcattattgttatcctacttaacaaaaaaacttgactacggatactttaagaataatgtccttgtgttt 18257941  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18257942 aatggggtctcacaattaagtcatacttaatgttccattaaacagactaattattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18258041  T
Q  218 tgcctt 223  Q
    ||||||    
T  18258042 tgcctt 18258047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 37 - 219
Target Start/End: Complemental strand, 13392338 - 13392157
Alignment:
Q  37 aatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaa 136  Q
    ||||||||||||| ||||||| ||||||  ||| |||||||| |||||||  |||||||| |||||| | |||||   ||||||||| |||||| |||||    
T  13392338 aatagtctctatgttttaatgttatcccttttcacaataaagtttgactattgatactttaagaataatgtcctttcatttaatggg-tctcacgattaa 13392240  T
Q  137 gttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 219  Q
    || | |||||||| |||||||| | |||||| | ||||||| |||||||||||||||||||||||||| |||| |||||||||    
T  13392239 gtcacacttaatgctccattaagcagactaattgttctaggaactttattattttgaaacaaaacaaagtcaacaaagaaatg 13392157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 2365101 - 2364917
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||| ||| |||| |||||||||||| ||||||| |||| || ||| |||||| | ||||||||| ||| ||| |||||| | || ||  ||||    
T  2365101 atcatcagtcgacccacatgatagtctctatgttttaatgttatctcatttcacaataagg-ttgactacgaatattttaagaataatgtcatttagttt 2365003  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaa 203  Q
    |||||| |||||| ||||||  | |||||||||||||||| |  |||||| |||||||| |||||||||||||||||||| |||||    
T  2365002 aatgggttctcacgattaagccacacttaatgttccattagaaagactaattattctagagactttattattttgaaacataacaa 2364917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 11543223 - 11543280
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11543223 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaacaa 11543280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 2653275 - 2653331
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2653275 catgatacaaagccaatcccaatcaatatagattggctattagggcttattccaaca 2653331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 33 - 192
Target Start/End: Complemental strand, 7396381 - 7396221
Alignment:
Q  33 acataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 132  Q
    ||||||||||||||||||||||||   |||  | ||| || ||| ||||||||||  ||  ||| |||||| ||| |||||||||||| ||||||||  |    
T  7396381 acataatagtctctatgctttaatatcatcgtatttcacactaaggcttgactacatatgttttaagaataattttcttatgtttaatagggtctcaaga 7396282  T
Q  133 ttaagttatacttaatgttcca-ttaaacggactaactattctagggactttattattttg 192  Q
    |||||| ||||||||||||||| ||||| | |||||||||||||| ||| || ||||||||    
T  7396281 ttaagtcatacttaatgttccatttaaatgaactaactattctagcgacatttttattttg 7396221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 12738499 - 12738443
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12738499 catgatacaaagccaaacccaatcaatatagattggctattagggcttactccaaca 12738443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 35 - 219
Target Start/End: Complemental strand, 39112002 - 39111819
Alignment:
Q  35 ataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaatt 134  Q
    ||||||||||||||  ||||||| |||  |  ||| |||||||||| ||||  | ||| |||   |||||| ||||||||||||| |  ||||    |||    
T  39112002 ataatagtctctatattttaatgttatttcgtttcacaataaagctggactgtgaatatttttgaaatagtgtccttatgtttaaagatgtcttgtgatt 39111903  T
Q  135 aagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 219  Q
    ||||  ||||||||||| |||||||||||||  ||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  39111902 aagtcgtacttaatgtttcattaaacggactcgctattctagggactttatt-ttttgaaataaaacaaaattaataaagaaatg 39111819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 11536305 - 11536362
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  11536305 catgatacaaagccaaaaccaatcaatatagagtggctattagggcttattccaacaa 11536362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 12750789 - 12750732
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  12750789 catgatacaaagccaaacccaatcaatatagattagctattagggcttactccaacaa 12750732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 15152406 - 15152349
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  15152406 catgatacaaaaccaaacccaatcaatatagattggctattagggcttactccaacaa 15152349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 29327745 - 29327689
Alignment:
Q  262 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  29327745 atgatacaaaaccaaacccaatcaatatagattggctattagggcttactccaacaa 29327689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 15148105 - 15148049
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||    
T  15148105 catgatacaaaaccaaacccaattaatatagattggctattagggcttactccaaca 15148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 13392085 - 13392029
Alignment:
Q  262 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||    
T  13392085 atgatacaaagtcaaacacaatcaatatagattggatattagggcttactccaacaa 13392029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 3132791 - 3132748
Alignment:
Q  108 ccttatgtttaatggggtctcacaattaagttatacttaatgtt 151  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  3132791 ccttatgtttaatggggtctcacaattaagttacacttaatgtt 3132748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 10234244 - 10234179
Alignment:
Q  110 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattcta 175  Q
    |||||||||||||  |||||  ||||||||||| |||||| | |||||||||||||||||||||||    
T  10234244 ttatgtttaatggaatctcatgattaagttatatttaatggttcattaaacggactaactattcta 10234179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 18258087 - 18258143
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||| |||||| ||||||||| |||||||||||| |||||||| |||||||    
T  18258087 catgatacaaggccaaaaccaatcaatctagattggctatcagggcttactccaaca 18258143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 2653207 - 2653239
Alignment:
Q  193 aaacaaaacaaaatcaataaagaaatgccttgt 225  Q
    |||||||||||||||||||||||||||||||||    
T  2653207 aaacaaaacaaaatcaataaagaaatgccttgt 2653239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 18560969 - 18560913
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||| ||||||||| |||||||| || | |||||||| |||||||    
T  18560969 catgatacaaagccaagcccaatcaacatagattgcctttaagggcttactccaaca 18560913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 461
Target Start/End: Original strand, 7157465 - 7157529
Alignment:
Q  397 tacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 461  Q
    ||||||| ||||||| | ||||||||| ||  |||||| ||||||||| | ||||||||||||||    
T  7157465 tacacattttttgattttgattttataaatttttgcaatgttatgctggtattgtgtgtctattt 7157529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 6110271 - 6110064
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6110271 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 6110172  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110171 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 6110072  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  6110071 tgccttgt 6110064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 10572592 - 10572799
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10572592 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 10572691  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572692 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 10572791  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  10572792 tgccttgt 10572799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 16482483 - 16482688
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16482483 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagagtagtttccttatgttt 16482582  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482583 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 16482682  T
Q  218 tgcctt 223  Q
    ||||||    
T  16482683 tgcctt 16482688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 17781118 - 17781319
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781118 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 17781217  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781218 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 17781317  T
Q  218 tg 219  Q
    ||    
T  17781318 tg 17781319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 15600884 - 15601091
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15600884 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 15600983  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600984 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 15601083  T
Q  218 tgccttgt 225  Q
    || |||||    
T  15601084 tgtcttgt 15601091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 15607429 - 15607636
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15607429 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 15607528  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607529 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 15607628  T
Q  218 tgccttgt 225  Q
    || |||||    
T  15607629 tgtcttgt 15607636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 18522870 - 18522665
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18522870 atcatcagtctacctacataatagtctctatgcttaaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgttt 18522771  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522770 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18522671  T
Q  218 tgcctt 223  Q
    ||||||    
T  18522670 tgcctt 18522665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 222
Target Start/End: Complemental strand, 13211509 - 13211305
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13211509 atcatcagtctacctacataatagtctctatgctttaatgatatctcacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 13211410  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211409 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 13211310  T
Q  218 tgcct 222  Q
    |||||    
T  13211309 tgcct 13211305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 13248814 - 13248607
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  13248814 atcatcagtctacctacataatagtctctatgctttaatgttatcccacttctcaacaaagcttgactacgaatactttgagaatagtttccttatgttt 13248715  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248714 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 13248615  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  13248614 tgccttgt 13248607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 15357586 - 15357793
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15357586 atcatcagtctacctacataatagtctctatgttttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgttt 15357685  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15357686 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactaatctagggactttattattttgaaacaaaacaaaatcaataaagaaa 15357785  T
Q  218 tgccttgt 225  Q
    || |||||    
T  15357786 tgtcttgt 15357793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 10579355 - 10579556
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10579355 atcatcagtctacctacataatagtctctatgctttaatgatatctcacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 10579454  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10579455 aatggggtctcacaattaagttatacttaatgttccatttaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 10579554  T
Q  218 tg 219  Q
    ||    
T  10579555 tg 10579556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 18520182 - 18519980
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||||||||||||||||||||    
T  18520182 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggat---ttaagaatagtttccttatgttt 18520086  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520085 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18519986  T
Q  218 tgcctt 223  Q
    ||||||    
T  18519985 tgcctt 18519980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 19089745 - 19089946
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  19089745 atcatcagtctacctacataatagtctctatgatttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttcattatgttt 19089844  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19089845 aaaggggtctcacaattaagttatacttaatgttccattaaacggactaactaatctagggactttattattttgaaacaaaacaaaatcaataaagaaa 19089944  T
Q  218 tg 219  Q
    ||    
T  19089945 tg 19089946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 8490702 - 8490488
Alignment:
Q  18 atcatcagtctacctacataat-------agtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttcct 110  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  8490702 atcatcagtctacctacataatcgtctgtagtctctatgctttaatgatatcccacttctcaacaaagcttgactacagatactttgagaatagtttcct 8490603  T
Q  111 tatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaat 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490602 tatgtttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaat 8490503  T
Q  211 aaagaaatgccttgt 225  Q
    |||||||||||||||    
T  8490502 aaagaaatgccttgt 8490488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 17200184 - 17200389
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||    
T  17200184 atcatcagtctacccacataatagtctctatgctttaatgatatcacacatctcaataaagcttaactacggatactttaagaatagtttcattatgttt 17200283  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17200284 aaaggggtatcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 17200383  T
Q  218 tgcctt 223  Q
    ||||||    
T  17200384 tgcctt 17200389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 15342219 - 15342407
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15342219 atcatcagtctacctacataatagtctctatgttttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgttt 15342318  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaat 206  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  15342319 aatggggtctcacaattaagttatacttaatgttccattaaacgaacaaactattctagggactttattattttgaaacaaaacaaaat 15342407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 13517018 - 13516813
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  13517018 atcatcagtctacccacataatagtctctgtgctttaatgatatcctacttctcaataaagcttgactacagatactttaagaatcgtttccttatgttt 13516919  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13516918 aacggggtctcacaattaagttatacttaatgttccatgaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 13516819  T
Q  218 tgcctt 223  Q
    ||||||    
T  13516818 tgcctt 13516813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 64 - 225
Target Start/End: Original strand, 18640792 - 18640953
Alignment:
Q  64 cacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacgga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18640792 cacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaatgga 18640891  T
Q  164 ctaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18640892 ctaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 18640953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 32056900 - 32057101
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||||||    
T  32056900 atcattagtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagtttgactacggacactttaagaatagtttctttatgttt 32056999  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || ||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32057000 aacggggtcttacaataaagttatacttgatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 32057099  T
Q  218 tg 219  Q
    ||    
T  32057100 tg 32057101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 1647521 - 1647726
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||| | |||||||||||||||||||||||| |||||||  ||||||||||||||||| |||||||||||| | ||||||||||||||||||    
T  1647521 atcatcagtctatccacataatagtctctatgctttaattatatcccttttctcaataaagcttgattacggatactttaaaaatagtttccttatgttt 1647620  T
Q  118 aatggggtctcacaattaag----ttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 213  Q
    || |||||||||||||||||    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1647621 aacggggtctcacaattaagttaattatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 1647720  T
Q  214 gaaatg 219  Q
    ||||||    
T  1647721 gaaatg 1647726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 37 - 223
Target Start/End: Complemental strand, 16200313 - 16200128
Alignment:
Q  37 aatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaa 136  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||| |||||| | ||||||||||||||||||||||||||||||    
T  16200313 aatagtctccatgctttaatgatatcccacttcacaataaatcttgactacgaatactttaagaataatgtccttatgtttaatggggtctcacaattaa 16200214  T
Q  137 gttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 223  Q
    ||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||| |||  ||||||||||||    
T  16200213 gttatacataatgttccattaaacgaactaactattctaaggactttattattttgaaacaaaataaaa-caacgaagaaatgcctt 16200128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 33 - 225
Target Start/End: Complemental strand, 29925163 - 29924971
Alignment:
Q  33 acataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 132  Q
    ||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||  ||| ||| |||||| | ||||||| ||||||||||||||||||    
T  29925163 acataatagcctccatgctttaatgatatctcacttcacaataaagcttgactacatatattttaagaataatgtccttatatttaatggggtctcacaa 29925064  T
Q  133 ttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 225  Q
    |||| |||||||||||  |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  29925063 ttaaattatacttaataatccattaaacggactaactattttaggggctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 29924971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 33 - 225
Target Start/End: Complemental strand, 29974316 - 29974124
Alignment:
Q  33 acataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 132  Q
    ||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||  ||| ||| |||||| | ||||||| ||||||||||||||||||    
T  29974316 acataatagcctccatgctttaatgatatctcacttcacaataaagcttgactacatatattttaagaataatgtccttatatttaatggggtctcacaa 29974217  T
Q  133 ttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 225  Q
    |||| |||||||||||  |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  29974216 ttaaattatacttaataatccattaaacggactaactattttaggggctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 29974124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 37 - 223
Target Start/End: Complemental strand, 16200619 - 16200434
Alignment:
Q  37 aatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaa 136  Q
    ||||||||  |||||||||||| |||||||||| ||||||| |||||||||| ||||||| |||||| | |||||||||||| ||| |||||||||||||    
T  16200619 aatagtcttcatgctttaatgacatcccacttcacaataaatcttgactacgaatactttaagaataatgtccttatgtttattggagtctcacaattaa 16200520  T
Q  137 gttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 223  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||  ||||||||||||    
T  16200519 gttatacataatgttccattaaacggactaactattctaaggactttattattttgaaacaaaataaaa-caacgaagaaatgcctt 16200434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 18 - 218
Target Start/End: Original strand, 24253388 - 24253589
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||| |||||||| ||||||||||||||||||||||||| || | |||||  |||||||  ||||| ||  ||||||| |||||||| |||||||||||    
T  24253388 atcattagtctaccgacataatagtctctatgctttaatgttacctcactttacaataaattttgaccacatatactttaagaatagtgtccttatgttt 24253487  T
Q  118 aatgggg-tctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaa 216  Q
     |||||| |||||| ||||||| |||||||||||||||| ||||| || | |||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  24253488 gatggggatctcacgattaagtcatacttaatgttccatcaaacgaacgagctattctaaggactttattattttgaagtaaaacaaaatcaataaagaa 24253587  T
Q  217 at 218  Q
    ||    
T  24253588 at 24253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 17136566 - 17136465
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17136566 atcatcagtctacccacataatagtctctatgttttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgttt 17136467  T
Q  118 aa 119  Q
    ||    
T  17136466 aa 17136465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 18534820 - 18534758
Alignment:
Q  161 ggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 223  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18534820 ggactaactattctatggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18534758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 6110028 - 6109971
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110028 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 6109971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 13248571 - 13248514
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248571 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 13248514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 8490452 - 8490396
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490452 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 8490396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 13211267 - 13211209
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaag 319  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13211267 catgatacaaaaccaaacccaatcaatatagattggctattagggcttattccaacaag 13211209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 18640989 - 18641045
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18640989 catgatacaaagccaaacacaatcaatatagattggctattagggcttattccaaca 18641045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 17136193 - 17136137
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  17136193 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 17136137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 10579603 - 10579653
Alignment:
Q  267 acaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10579603 acaaagtcaaacccaatcaatatagattggctattagggcttattccaaca 10579653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 15607672 - 15607730
Alignment:
Q  261 catgatacaaagccaaacccaatcaa-tatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  15607672 catgatacaaagccaaacccaataaaatatagattggctattagggcttattccaacaa 15607730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 15351237 - 15351294
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  15351237 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaacaa 15351294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 15357829 - 15357886
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  15357829 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaacaa 15357886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 17200427 - 17200484
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  17200427 catgctacaaagccaaacccaatcaacatagattggctattagggcttactccaacaa 17200484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 18510969 - 18510924
Alignment:
Q  178 gactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510969 gactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18510924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 16482727 - 16482782
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  16482727 catgatacaaagccaaacccaatcaatatagattgg-tattagggcttattctaaca 16482782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 18519941 - 18519885
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||    
T  18519941 catgatacaaaaccaaacccaatcaatatagattggctattaggacttactccaaca 18519885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 267 - 318
Target Start/End: Original strand, 10572840 - 10572891
Alignment:
Q  267 acaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  10572840 acaaagtcaaacccaatcaatataggttggctattagggcttattccaacaa 10572891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 13516775 - 13516717
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaag 319  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||| |||||||||    
T  13516775 catgatacacagccaaactcaatcaacatagattggctattagggcttactccaacaag 13516717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 15601127 - 15601185
Alignment:
Q  261 catgatacaaagccaaacccaatcaa-tatagattggctattagggcttattccaacaa 318  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||    
T  15601127 catgatacaaatccaaacccaataaaatatagattggctattagggcttattccaacaa 15601185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 17781358 - 17781415
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||||| ||||||||    
T  17781358 catgatataaaaccaaactcaatcaatatagattggctattagggcttactccaacaa 17781415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 19089985 - 19090042
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||||| ||||||||    
T  19089985 catgatataaaaccaaactcaatcaatatagattggctattagggcttactccaacaa 19090042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 1647768 - 1647824
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||| |||||||    
T  1647768 catgatacaaagccaaacccaatcaatatagaccagctattagggcttactccaaca 1647824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 32057144 - 32057200
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||| ||||||||||||| |||||||||||||||| ||||| |||||||    
T  32057144 catgatacaaagtcaaacccaatcaacatagattggctattagagcttactccaaca 32057200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 461
Target Start/End: Original strand, 23046330 - 23046433
Alignment:
Q  358 gtgataacacttaagatgtattaccattttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtct 457  Q
    |||||||||| ||| ||| | ||  ||||||||| ||| ||||||| |||| |||||||||||||||||  |||||| |||||| || | ||||||||||    
T  23046330 gtgataacacgtaaaatgcaatattattttagctcgacttacacatttttttatctcgattttatagatttttgcaatgttatgttggtattgtgtgtct 23046429  T
Q  458 attt 461  Q
    ||||    
T  23046430 attt 23046433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 18510885 - 18510828
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||  ||||| ||||||||||||||||| |||||||||||| ||||||||    
T  18510885 catgatacaaaatcaaactcaatcaatatagattggatattagggcttactccaacaa 18510828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 18522626 - 18522569
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||  ||||| ||||||||||||||||| |||||||||||| ||||||||    
T  18522626 catgatacaaaatcaaactcaatcaatatagattggatattagggcttactccaacaa 18522569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 18534719 - 18534662
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||||||| | ||||||    
T  18534719 catgatacaaaaccaaactcaatcaatatagattgactattagggcttactacaacaa 18534662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 29924935 - 29924879
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||| | ||||| |||||||||||||| | ||||||||||||| |||||||    
T  29924935 catgatacaatgtcaaactcaatcaatatagatcgactattagggcttactccaaca 29924879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 29974088 - 29974032
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||| | ||||| |||||||||||||| | ||||||||||||| |||||||    
T  29974088 catgatacaatgtcaaactcaatcaatatagatcgactattagggcttactccaaca 29974032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 200; Significance: 1e-109; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 6934 - 7141
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6934 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 7033  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7034 aatagggtctcacagttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 7133  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  7134 tgccttgt 7141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 13950 - 14157
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13950 atcatcagtctacctacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacagatactttgagaatagtttccttatgttt 14049  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14050 aatggggtctcacagttaagttatacttaatgttccattaaacggactaactattgtagggactttattattttgaaacaaaacaaaatcaataaagaaa 14149  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  14150 tgccttgt 14157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 7177 - 7234
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  7177 catgatacaaaaccaaactcaatcaatatagattggctattagggcttattccaacaa 7234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 14193 - 14249
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  14193 catgatacaaaaccaaactcaatcaatatagattggctattagggcttattccaaca 14249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 21940872 - 21940665
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940872 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 21940773  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21940772 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggaactttattattttgaaacaaaacaaaatcaataaagaaa 21940673  T
Q  218 tgccttgt 225  Q
    ||| ||||    
T  21940672 tgcattgt 21940665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 22171694 - 22171491
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  22171694 atcatcagtctacctacataatagtctctatgctttaatgatattccacttctcaataaagcttgactacggatactttgagaatagtttc--tatgttt 22171597  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  22171596 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaataaaacaaaatcaataaggaaa 22171497  T
Q  218 tgcctt 223  Q
    ||||||    
T  22171496 tgcctt 22171491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 6094330 - 6094129
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  6094330 atcatcactctacccatataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaaaaatagtttccttatgttt 6094231  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6094230 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 6094131  T
Q  218 tg 219  Q
    ||    
T  6094130 tg 6094129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 24 - 223
Target Start/End: Complemental strand, 28555084 - 28554885
Alignment:
Q  24 agtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggg 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  28555084 agtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatacttttagaatagtttcattatgtttaatggg 28554985  T
Q  124 gtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||| ||||||||||||||||||||||||||    
T  28554984 gtctcacaattaagttatacttaatgttccattaaacggactaactattttaggtattttattattttgaaactaaacaaaatcaataaagaaatgcctt 28554885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 24642856 - 24642655
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  24642856 atcatcagtctacccacataatagtctctatactttaatgatatctcacttctcaataaagcttgactacgaatactttaagaatagtttccttatgttt 24642757  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  24642756 aacggggtctcacaattaagttatacttaatgttccattaaacggactaacaattctagggactttatgattttgaaacaaaacaaaatcaataaagaaa 24642657  T
Q  218 tg 219  Q
    ||    
T  24642656 tg 24642655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 92 - 219
Target Start/End: Complemental strand, 24636987 - 24636860
Alignment:
Q  92 actttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattatttt 191  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24636987 actttaagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaaaggactaactattctagggactttattatttt 24636888  T
Q  192 gaaacaaaacaaaatcaataaagaaatg 219  Q
    |||||||||||||||||| |||||||||    
T  24636887 gaaacaaaacaaaatcaagaaagaaatg 24636860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 21940629 - 21940573
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21940629 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 21940573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 22070164 - 22070108
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22070164 catgatacaaaaccaaacccaatcaatatagattggctattagggcttattccaaca 22070108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 21 - 213
Target Start/End: Original strand, 38232380 - 38232570
Alignment:
Q  21 atcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaat 120  Q
    ||||||||||| ||| |||||| | ||||||||||   |||| |||||  |||||||| ||||||||  ||||||| |||||| | |  ||| |||||||    
T  38232380 atcagtctacccacaaaatagtttttatgctttaagactatctcactttacaataaagtttgactacaaatactttaagaatactatt-ttacgtttaat 38232478  T
Q  121 ggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 213  Q
    || || |||  |||||||||||| |||   |  ||||||| ||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  38232479 ggagtgtcatgattaagttatacctaaaaatttattaaacagactaactattctagaga-tttattattttgaaataaaacaaaatcaataaa 38232570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 22171452 - 22171395
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  22171452 catgatacaaaatcaaacccaatcaatatagattggctattagggcttattccaacaa 22171395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 24642608 - 24642555
Alignment:
Q  265 atacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24642608 atacaaagccaaacccaatcaatatagattggctattagggcttactccaacaa 24642555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 6094087 - 6094031
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  6094087 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 6094031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 195
Target Start/End: Original strand, 32872857 - 32873019
Alignment:
Q  34 cataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaat 133  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||| ||| |||||  ||| ||| | | || | ||  | | || |||| | |||||||||    
T  32872857 cataatagtctctatgctttgatgttatcccacttcacaataaatcttaactacaaatattttaatagtattgtcactcttttcaatgagatctcacaat 32872956  T
Q  134 taagttatacttaatgttccat-taaacggactaactattctagggactttattattttgaaa 195  Q
    ||||| ||||||||||||| || |||| |||  ||||||| || |||||||||||||||||||    
T  32872957 taagtcatacttaatgttctatataaatggatgaactattataaggactttattattttgaaa 32873019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 28554847 - 28554790
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  28554847 catgatacaaagccaaacccaatcaacaaagattggctattagggcttactccaacaa 28554790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 461
Target Start/End: Original strand, 40755860 - 40755938
Alignment:
Q  383 attttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 461  Q
    ||||||||| ||| ||||||| |||| |||||||||||||||||  |||||| ||||||||| | ||||||||||||||    
T  40755860 attttagctcgacttacacatttttttatctcgattttatagatttttgcaatgttatgctggtattgtgtgtctattt 40755938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 204
Target Start/End: Complemental strand, 2375208 - 2375027
Alignment:
Q  21 atcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaat 120  Q
    |||| |||||| || |||||||   ||| |||||||| |||| |||| | ||||||| | |||||||  ||||||| | |||| | | | ||||||||||    
T  2375208 atcaatctacccacttaatagttcatatactttaatgttatctcact-cgcaataaatcgtgactacatatactttaaaaataatattcgtatgtttaat 2375110  T
Q  121 ggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaa 204  Q
    ||| | |||  ||||||| ||  | ||||||||||||||  |||||| |||| |||||| ||||||||||||||||||||||||    
T  2375109 gggtt-tcatgattaagtcatcataaatgttccattaaattgactaattattatagggagtttattattttgaaacaaaacaaa 2375027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 10920297 - 10920234
Alignment:
Q  124 gtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatta 187  Q
    ||||||| ||||| | ||||||||||||||||||||| |||||| ||||||||| | |||||||    
T  10920297 gtctcacgattaactcatacttaatgttccattaaacagactaattattctaggaattttatta 10920234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 14983920 - 14984030
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||| |||||||| ||||||||||| |||| ||| |||| ||||||||||| |||||||  |||| ||  |||||||| |||||| | ||||   ||||    
T  14983920 atcattagtctacccacataatagtccctattctt-aatgttatcccacttcacaataaattttgattatagatactttaagaataatgtcctatagttt 14984018  T
Q  118 aatggggtctca 129  Q
    ||| ||||||||    
T  14984019 aattgggtctca 14984030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 2375000 - 2374946
Alignment:
Q  264 gatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||||| |||||||||| | |||   |||||||||||||||||||||    
T  2375000 gatacaaagccaaatccaatcaatacatatttattattagggcttattccaacaa 2374946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 24636642 - 24636605
Alignment:
Q  280 caatcaatatagattggctattagggcttattccaaca 317  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  24636642 caatcaatatagattggctattatggcttactccaaca 24636605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 29309097 - 29308890
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29309097 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 29308998  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308997 aatgggctctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 29308898  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  29308897 tgccttgt 29308890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 29316057 - 29315850
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29316057 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 29315958  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315957 aatgggctctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 29315858  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  29315857 tgccttgt 29315850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 16566320 - 16566525
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16566320 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgttt 16566419  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566420 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 16566519  T
Q  218 tgcctt 223  Q
    ||||||    
T  16566520 tgcctt 16566525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 27381252 - 27381459
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||    
T  27381252 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactatggatactttgagaatagtttccatatgttt 27381351  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381352 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 27381451  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  27381452 tgccttgt 27381459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 27471635 - 27471842
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||    
T  27471635 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactatggatactttgagaatagtttccatatgttt 27471734  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471735 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 27471834  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  27471835 tgccttgt 27471842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 17684469 - 17684674
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  17684469 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcatcaaagcttgactacggatactttgagaatagtttccttatgttt 17684568  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684569 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 17684668  T
Q  218 tgcctt 223  Q
    ||||||    
T  17684669 tgcctt 17684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 17691440 - 17691647
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  17691440 atcatcagtctacctacataatagtctttatgctttaatgatatcccacttctcactaaagcttgactacggatactttaagaatagtttccttatgttt 17691539  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17691540 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaagaaaacaaaatcaataaagaaa 17691639  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  17691640 tgccttgt 17691647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 188977 - 189182
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  188977 atcatcagtctacccacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactacaaatactttaagaatagtttccttatgttt 189076  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  189077 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaa 189176  T
Q  218 tgcctt 223  Q
    ||||||    
T  189177 tgcctt 189182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 25537159 - 25537364
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  25537159 atcatcagtctacctacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacgaatactttaagaatagtttccttatgttt 25537258  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25537259 aacggggtctcacaataaagttatacttaatgttccattaaacggactaattattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 25537358  T
Q  218 tgcctt 223  Q
    ||||||    
T  25537359 tgcctt 25537364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 11651930 - 11651725
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||| |||    
T  11651930 atcatcagtctacccacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactactgatacttttagaatagtttccttattttt 11651831  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  11651830 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattttagggactttattattttgaaacaaatcaaaatcaataaagaaa 11651731  T
Q  218 tgcctt 223  Q
    ||||||    
T  11651730 tgcctt 11651725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 13359269 - 13359474
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||| | | ||||||||||||| ||||||||| | ||||| ||| |||||||| ||||||||||||||||| | |||| | |  ||||||||    
T  13359269 atcatcagtctatccatataatagtctctacgctttaatgttgtcccatttcacaataaaggttgactacggatactttaaaaataatgtttttatgttt 13359368  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||| || |||| |||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  13359369 aatggagtttcacgattaagttatacttaatgctccattaagcgaactaactattctagggactttattattttgaaacaaaacaaaataaataaataaa 13359468  T
Q  218 tgcctt 223  Q
    ||||||    
T  13359469 tgcctt 13359474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 20553587 - 20553755
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| |||||| | ||| |||||||||||  |||| |||||| |||||||  || ||||||||| |||| |||||| | | ||||| |||    
T  20553587 atcatcagtctaccaacataaaaatctttatgctttaattttatctcacttcacaataaaaattcactacggatgctttaagaataatattcttatattt 20553686  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatt 186  Q
    |||||| |||||| |||||||  |||||||| || |||||||||||||| |||| |||| |||||||||    
T  20553687 aatgggatctcacgattaagtcgtacttaatatttcattaaacggactagctatcctagagactttatt 20553755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 17691683 - 17691737
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691683 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 17691737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 27381495 - 27381552
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381495 catgaaacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 27381552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 27471878 - 27471935
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471878 catgaaacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 27471935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 29308854 - 29308797
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29308854 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaacaa 29308797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 29315814 - 29315757
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29315814 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaacaa 29315757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 27925961 - 27925772
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||| || | |||||||||||| | ||||| |||| ||| |||||||  ||||||| |||||||  |||||||| |||||| ||| |||  ||||    
T  27925961 atcatcagtttatccacataatagtctttgtgcttcaatgctataccacttccaaataaagtttgactagagatactttaagaataattttctttagttt 27925862  T
Q  118 aatggggtctcacaattaagt--tatactta---atgttccattaaacggactaactattctagggactttattattttgaaacaaaaca 202  Q
    ||||| ||||||| |||||||   | |||||   ||||||| ||||||  ||||  ||||||| ||||||||||||||||||||||||||    
T  27925861 aatggagtctcacgattaagtcacacacttaattatgttccgttaaacatactagttattctaaggactttattattttgaaacaaaaca 27925772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 33 - 206
Target Start/End: Complemental strand, 8510115 - 8509941
Alignment:
Q  33 acataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgggg-tctcaca 131  Q
    |||||||||||| |||| ||||||| |||| || |||  |||||||||| |||||  ||||||| | ||||   |||| || |||||||||| ||||| |    
T  8510115 acataatagtctttatgttttaatgctatctcatttcataataaagcttaactacatatactttaataatatcatcctcatatttaatgggggtctcata 8510016  T
Q  132 attaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaat 206  Q
    |||||||  ||| ||||||||||| |||  |||||| |||||||  |||||||||||||| |||||||| |||||    
T  8510015 attaagtcgtacataatgttccatcaaatagactaattattctatagactttattattttaaaacaaaataaaat 8509941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 17684712 - 17684769
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  17684712 catgatacaaagccaaacccattcaacatagattggctattagggcttattccaacaa 17684769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 17850495 - 17850663
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| | |||||||||| ||| ||| |||| |||   ||||| ||| |||||||||||| ||||| ||| |||||||| ||||| | |||    
T  17850495 atcatcagtctacccatataatagtctatatacttgaatgttatttgacttcacaa-aaagcttgactatggataatttaagaatagtgtccttgttttt 17850593  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatta 187  Q
    ||| || | ||||||||||||  ||| ||||||||||  ||||  |||| ||||| ||||||||||||||    
T  17850594 aattggatatcacaattaagtcttacataatgttccaacaaacaaactagctattatagggactttatta 17850663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 11651684 - 11651630
Alignment:
Q  263 tgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  11651684 tgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 11651630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 25537405 - 25537462
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||    
T  25537405 catgatacaaagccaaactcagtcaatatagattggctattagggcttaatccaacaa 25537462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 20736604 - 20736773
Alignment:
Q  19 tcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatac-tttgagaatagt-ttccttatgtt 116  Q
    |||||||||||| |||||||||||||| | |||||| |  ||||||| |||| | |||||||||||||| ||||| ||| |||||| | ||| ||||| |    
T  20736604 tcatcagtctacatacataatagtctcgacgctttattattatcccagttcttattaaagcttgactacagatacatttaagaataatgttctttatg-t 20736702  T
Q  117 taatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatta 187  Q
    |||||   |||||  ||||||| | ||||||| | |||||| ||| |||| |||||||||| |||||||||    
T  20736703 taatgtaatctcatgattaagtcaaacttaatataccattacacgaactatctattctaggaactttatta 20736773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 31258065 - 31258120
Alignment:
Q  163 actaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaat 218  Q
    ||||| |||| ||| |||||||||||||||||||||||||||| ||||||||||||    
T  31258065 actaattattttagagactttattattttgaaacaaaacaaaagcaataaagaaat 31258120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 13359512 - 13359569
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||| ||| ||||    
T  13359512 catgatacaaagtcaaacccaatgaatatagattggctattaggacttactcccacaa 13359569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 16566563 - 16566611
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggctta 309  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  16566563 catgatacaaagtcaaactcaatcaacatagattggctattagggctta 16566611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 189221 - 189280
Alignment:
Q  261 catgatacaaagccaaacccaatcaata---tagattggctattagggcttattccaaca 317  Q
    ||||||||||||||||||||||||||||   |||||||  |||||||||||| |||||||    
T  189221 catgatacaaagccaaacccaatcaatatactagattgattattagggcttactccaaca 189280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 303
Target Start/End: Original strand, 16394484 - 16394526
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattag 303  Q
    |||||||||||| ||||| |||||||||||||||| |||||||    
T  16394484 catgatacaaagtcaaactcaatcaatatagattgtctattag 16394526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 22259925 - 22259990
Alignment:
Q  144 ttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 209  Q
    ||||||||  |||||| ||||||  |||| |||||| |||||||||||| |||| |||||||||||    
T  22259925 ttaatgttatattaaatggactagttattttagggagtttattattttgcaacataacaaaatcaa 22259990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 21330248 - 21330455
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330248 atcatcagtccacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 21330347  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330348 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 21330447  T
Q  218 tgccttgt 225  Q
    || |||||    
T  21330448 tgtcttgt 21330455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 18796713 - 18796506
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| |||| ||| |||||| | ||||||||||     
T  18796713 atcatcagtctacccacataatagtctcaatgctttaatgatataccacttcacaataaagcttgactacagataatttaagaataatatccttatgtta 18796614  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||| |||    
T  18796613 aaagaggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttgttattttgaaacaaaacaaaataaacaaataaa 18796514  T
Q  218 tgccttgt 225  Q
    | ||||||    
T  18796513 ttccttgt 18796506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 18620011 - 18619807
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||| | ||||| |||||||||||| |||||||||||  ||||||  ||| |||||||| ||||| || |||||||| |||||| | ||||| |||||    
T  18620011 atcatcggcctacccacataatagtctatatgctttaatattatcccttttcacaataaagtttgaccacagatactttaagaataatatccttttgttt 18619912  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||| ||||| |||||||| | |||||||| |||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||| |||||||    
T  18619911 aatggg-tctcataattaagtcacacttaatgctccattaaacagactaattattatagggactttattattttgaaacaaaacaaaatcaacaaagaaa 18619813  T
Q  218 tgcctt 223  Q
    | ||||    
T  18619812 ttcctt 18619807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 80 - 219
Target Start/End: Original strand, 19692598 - 19692737
Alignment:
Q  80 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 179  Q
    ||||||| ||||||||| |||||| |||||||  |||||||| | |||||  ||||||| |  |||||||||||||||||| |||||| |||||||||||    
T  19692598 ttgactaaggatactttaagaataatttcctttagtttaatgagatctcatgattaagtcaggcttaatgttccattaaacagactaattattctaggga 19692697  T
Q  180 ctttattattttgaaacaaaacaaaatcaataaagaaatg 219  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  19692698 cttcattattttgaaacaaaacaaaatcaataaagaaatg 19692737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 33 - 160
Target Start/End: Complemental strand, 20978084 - 20977957
Alignment:
Q  33 acataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 132  Q
    |||||||||||||||||||||| ||||||| |||||| || ||||||||||||||||||  ||| |||||| ||||||||| ||||||||| |||||  |    
T  20978084 acataatagtctctatgctttagtgatatctcacttcacattaaagcttgactacggatgttttaagaataatttccttatttttaatgggatctcatga 20977985  T
Q  133 ttaagttatacttaatgttccattaaac 160  Q
    |||| |||| ||||||||||||||||||    
T  20977984 ttaaattattcttaatgttccattaaac 20977957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 36270373 - 36270199
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| ||| |||||||| ||| |||||||| |||||| |||| || |||||||||| |||||||  ||| |||||||| || || |||||    
T  36270373 atcatcagtctacccacacaatagtctttatactttaatgttatccctcttcacactaaagcttgattacggatgttttaagaatagtgtcattgtgttt 36270274  T
Q  118 aatggggtctcacaattaagttatacttaatgttcca-ttaaacggactaactattctagggactttattatttt 191  Q
    ||||  ||||||| ||||||| | ||||||  || || ||||    |||||||||||||||||||||||||||||    
T  36270273 aatgatgtctcacgattaagtcacacttaacatttcatttaagtaaactaactattctagggactttattatttt 36270199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 21330493 - 21330549
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330493 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 21330549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 18822290 - 18822115
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||   |||||||| ||| | ||||||||||||||||||||||  | |||||||||| |||  ||  ||| |||||||| ||||| |||||    
T  18822290 atcatcagtctattgacataataatctatctgctttaatgatatcccacttcaaactaaagcttgattacatatgttttaagaatagtgtccttgtgttt 18822191  T
Q  118 aatggggtctcacaattaagttatacttaa-tgttcca-ttaaacggactaactattctagggactttattatttt 191  Q
    ||||| ||||||| ||||||  | |||||| | ||||| ||||||| |||||| ||||||  ||||||||||||||    
T  18822190 aatggtgtctcacgattaagccacacttaatttttccatttaaacgaactaacaattctatagactttattatttt 18822115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 383 - 461
Target Start/End: Original strand, 23689061 - 23689139
Alignment:
Q  383 attttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 461  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||  |||||| |||||| || | ||||||||||||||    
T  23689061 attttagctcgacttacatattttttgatctcgattttatagatatttgcaatgttatgatggtattgtgtgtctattt 23689139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 19692773 - 19692830
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||| ||||||| ||| |||| ||||||||||||| |||||| ||||||||    
T  19692773 catgatacaaaaccaaacctaataaatacagattggctattaaggcttactccaacaa 19692830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 189
Target Start/End: Original strand, 36802664 - 36802820
Alignment:
Q  34 cataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaat 133  Q
    ||||||| ||| |||||||||||| ||||||||||  || | || ||||| |||||||  ||| |||||| | || || |||||||||   |||  ||||    
T  36802664 cataataatctatatgctttaatgttatcccactttacactgaatcttgattacggatgttttaagaataatgtcattgtgtttaatgatatcttgcaat 36802763  T
Q  134 taagttatacttaatgttcca-ttaaacggactaactattctagggactttattatt 189  Q
    ||||| | | ||||| ||||| ||||||| | ||||||||| | |||||||||||||    
T  36802764 taagtaacatttaatattccatttaaacgaattaactattcaaaggactttattatt 36802820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 12098618 - 12098705
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagt 105  Q
    ||||||||||||| |||||||||||||||||| |||| |  ||||| | |||  | |||| |||||||||| ||||||| | ||||||    
T  12098618 atcatcagtctacatacataatagtctctatgttttattactatccaatttcatattaaaacttgactacgaatactttaaaaatagt 12098705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 18852059 - 18852146
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagt 105  Q
    ||||| |||||||| |||||||||||| ||   ||||||| ||||| ||||| |||||||| | ||||||  ||||||| ||||||||    
T  18852059 atcattagtctaccgacataatagtctatacaatttaatgttatcctacttcacaataaagttggactacatatactttaagaatagt 18852146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 24471643 - 24471792
Alignment:
Q  33 acataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 132  Q
    |||||||||||| ||||||||| || ||||||||||   |||| || |||  || ||||||||  |||||| | | |||||||  ||||  |||||||||    
T  24471643 acataatagtctttatgctttagtgttatcccactttaaaatagagtttgtgtatggatacttaaagaataatgttcttatgtcaaatgatgtctcacaa 24471742  T
Q  133 ttaagttatacttaatgttccattaaacggactaactattctagggacttt 183  Q
    |||||| | || |||||  | ||||||| |||||| |||| ||||||||||    
T  24471743 ttaagtcacacataatg-gctattaaaccgactaaatattttagggacttt 24471792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 22183483 - 22183552
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactac 87  Q
    ||||||| |||||| || ||||||||||||| |||||||| |||||   ||| || ||||||||||||||    
T  22183483 atcatcaatctacccacgtaatagtctctatactttaatgttatccattttcacactaaagcttgactac 22183552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 18796470 - 18796411
Alignment:
Q  261 catgatacaaagccaaacccaatcaa--tatagattggctattagggcttattccaacaa 318  Q
    |||||||||||||||||| |||||||  ||||||||  || |||||||||| ||||||||    
T  18796470 catgatacaaagccaaacgcaatcaatatatagattttctgttagggcttaatccaacaa 18796411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 196; Significance: 1e-106; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 18495 - 18288
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18495 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 18396  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18395 aatggggtctcacaattaagttatacttaatgttcaattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18296  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  18295 tgccttgt 18288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 18252 - 18196
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 18196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 7314 - 7107
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  7314 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatacttttagaatagtttcattatgttt 7215  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7214 aatggggtctcacaattaagttatacttaatgttctattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 7115  T
Q  218 tgccttgt 225  Q
    | ||||||    
T  7114 taccttgt 7107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 7071 - 7014
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7071 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 7014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 24695466 - 24695673
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  24695466 atcatcagtctacctacataatagtctctatgctttattgatatctcacttctcaataaagcttgactacggatacttttagaatagtttcattatgttt 24695565  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695566 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 24695665  T
Q  218 tgccttgt 225  Q
    ||||||||    
T  24695666 tgccttgt 24695673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 18569863 - 18570070
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  18569863 atcatcagtctaccaacataatagtctttatgctttaatgatattccacttctcaataaagcttgactacggatactttaagagtagtttccttatgttt 18569962  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18569963 aacggggtctcacaattaagttatacttaatgttcaattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18570062  T
Q  218 tgccttgt 225  Q
    || |||||    
T  18570063 tgtcttgt 18570070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 19714498 - 19714703
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||| ||||||||||||    
T  19714498 atcatcagtctacccacataatagtctctatgctttaatgatatcctacttctcaataaagcttgacttcggatattttaagaatagattccttatgttt 19714597  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  19714598 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattactttgaaataaaacaaaatcaataaagaaa 19714697  T
Q  218 tgcctt 223  Q
    ||||||    
T  19714698 tgcctt 19714703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 19707218 - 19707419
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||| ||||||||||||    
T  19707218 atcatcagtctacccacataatagtctctatgctttaatgatatcctacttctcaataaagcttgacttcggatattttaagaatagattccttatgttt 19707317  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  19707318 aacggggtctcacaattaagttatacttaatgttccattaaactgactaactattctagggactttattactttgaaataaaacaaaatcaataaagaaa 19707417  T
Q  218 tg 219  Q
    ||    
T  19707418 tg 19707419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 37 - 220
Target Start/End: Original strand, 27347497 - 27347679
Alignment:
Q  37 aatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaa 136  Q
    ||||||||||||||||||||| ||||||  ||| |||||||||||||||||  ||||||| |||||| | |||||  |||||||||| |||||| |||||    
T  27347497 aatagtctctatgctttaatgttatcccttttcacaataaagcttgactacatatactttaagaataatgtcctttcgtttaatggg-tctcacgattaa 27347595  T
Q  137 gttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgc 220  Q
    || | |||||||| |||||||||| || ||| ||||||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  27347596 gtcacacttaatgctccattaaacagattaattattctaaggactttattattttgaatcaaaacaaaatcaacaaagaaatgc 27347679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 22547016 - 22547217
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||| ||||| | ||||||||||||||||  ||||||| |||| |||||| |||||||| |||||| || ||||||| | |||| | ||| ||| |||    
T  22547016 atcatcggtctatccacataatagtctctatattttaatgttatctcacttcacaataaagtttgactgcgaatactttaaaaataatgtccatatattt 22547115  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||| | |||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |  ||||||||||| ||| |||||||||| |||||| |||    
T  22547116 aatgagatctcacgattaagttatacttaatgttccattaaaccgactaactattatagcggttttattattttaaaataaaacaaaatgaataaataaa 22547215  T
Q  218 tg 219  Q
    ||    
T  22547216 tg 22547217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 39538071 - 39537962
Alignment:
Q  116 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaaga 215  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||| |  |||||||||||||||||||||| ||||||    
T  39538071 ttaatgaggtctcacaattaagttatacttaatgttccattaaacgaaccaactattctaaggacttaaccattttgaaacaaaacaaaatcattaaaga 39537972  T
Q  216 aatgccttgt 225  Q
    |||| |||||    
T  39537971 aatggcttgt 39537962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 40 - 221
Target Start/End: Original strand, 17285754 - 17285935
Alignment:
Q  40 agtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagtt 139  Q
    ||||| |||||||||||  ||||||| ||| |||||||| | ||||| | ||||||| |||||| | || ||  ||||| | |||| |||| |||||||     
T  17285754 agtctatatgctttaatactatcccaattcacaataaagatcgactatgaatactttaagaataatgtcatttagtttactagggtttcacgattaagtc 17285853  T
Q  140 atacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcc 221  Q
    | ||||||||||||||||||| |||||||||||||  |||  |||||||||||||||| ||||||||||||||| |||||||    
T  17285854 acacttaatgttccattaaacagactaactattctctggagattattattttgaaacataacaaaatcaataaataaatgcc 17285935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 18807034 - 18807175
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttcc-ttatgtt 116  Q
    ||||||||||||||  ||||||||||||||||||||| || ||||  ||||| |||||| |||||||||  |||||||| |||||| | ||| |||| ||    
T  18807034 atcatcagtctacccgcataatagtctctatgctttattgttatcttacttcacaataacgcttgactatagatactttaagaataatgtccattat-tt 18807132  T
Q  117 taatggggtctcacaattaagttatacttaatgttccattaaa 159  Q
    |||||| ||||||| ||||||| | ||||||||||||||||||    
T  18807133 taatggtgtctcacgattaagtcacacttaatgttccattaaa 18807175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 40 - 221
Target Start/End: Original strand, 17298907 - 17299088
Alignment:
Q  40 agtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagtt 139  Q
    ||||| |||||||||||  ||||||||||  |||||||| | ||||| | ||||||| |||||| | || ||  ||||| | |||| |||| |||||||     
T  17298907 agtctatatgctttaatactatcccacttaacaataaagatcgactatgaatactttaagaataatgtcatttagtttactagggtttcacgattaagtc 17299006  T
Q  140 atacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcc 221  Q
      ||||||||||||||||| |||||||||||||||  |||  |||||||||  ||||| ||||||||||||||| |||||||    
T  17299007 gcacttaatgttccattaatcggactaactattctctggatattattatttataaacataacaaaatcaataaataaatgcc 17299088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 24695709 - 24695766
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695709 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 24695766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 39538793 - 39538701
Alignment:
Q  20 catcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttcctta 112  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||||| ||||||||||| |||| ||||| ||| |||||||| ||||||    
T  39538793 catcagtctacccacataatagtcttcatgctttaatgatatcccacttcacaataaagcttaactatggatattttaagaatagtgtcctta 39538701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 31886640 - 31886537
Alignment:
Q  116 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaaga 215  Q
    ||||||| ||||||| |||||||  ||||| |||||| |||||| | ||||| ||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  31886640 ttaatggagtctcacgattaagtcgtacttgatgttcaattaaatgaactaattattctaaggactttattaatttgaaacaaaacaaaatcactaaaga 31886541  T
Q  216 aatg 219  Q
    ||||    
T  31886540 aatg 31886537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 19714742 - 19714798
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19714742 catgatacaaagccaaacccaatcaatatagattggctattagggcttactccaaca 19714798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 19707462 - 19707519
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  19707462 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaacaa 19707519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 27347722 - 27347778
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  27347722 catgatacaaagccaaacgcaatcaatatagattggctattagggcttactccaaca 27347778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 199
Target Start/End: Original strand, 33477389 - 33477479
Alignment:
Q  109 cttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaa 199  Q
    |||||| |||||| |||||||| ||||  | | |||||||| |||||||| | | ||||||||| || |||||||||||||||||||||||    
T  33477389 cttatgattaatgaggtctcacgattagatcacacttaatgatccattaatcagcctaactattgtaaggactttattattttgaaacaaa 33477479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 18570108 - 18570165
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||||||||| |||||||||| |||||||| ||||| || |||||    
T  18570108 catgatacaaagccaaacccaattaatatagattagctattagagcttactcgaacaa 18570165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 39537925 - 39537870
Alignment:
Q  262 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||| |||| || |||| |||||||||||||||||||||| |||||||    
T  39537925 atgatacaaagctaaactcagtcaacatagattggctattagggcttaatccaaca 39537870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 461
Target Start/End: Original strand, 19183638 - 19183716
Alignment:
Q  383 attttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 461  Q
    ||||||||| ||| ||||||| ||||||||| ||||||||||||  ||||||  |||| ||| | ||||||||||||||    
T  19183638 attttagctcgacttacacattttttgatcttgattttatagatttttgcaattttatactggtattgtgtgtctattt 19183716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 11479489 - 11479420
Alignment:
Q  107 tccttatgtttaatg-gggtctcacaattaagttatacttaatgttccattaaacggactaactattcta 175  Q
    ||||||||||||||| |||||||||||| |||| | ||||||| || ||||||||  ||||| |||||||    
T  11479489 tccttatgtttaatgagggtctcacaatcaagtcacacttaatatttcattaaacacactaattattcta 11479420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 188; Significance: 1e-101; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 1200 - 993
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  1200 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttgagaatagtttctttatgttt 1101  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1100 aatggggtctcacaattaagttatacttaatgtttcattaaacggactaactattttagggactttattattttgaaacaaaacaaaatcaataaagaaa 1001  T
Q  218 tgccttgt 225  Q
    || |||||    
T  1000 tgtcttgt 993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 957 - 901
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  957 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 184; Significance: 2e-99; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 25990 - 26197
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25990 atcatcagtctacctacataatagtcgctatgctttaatgatatcccacttttcaataaagcttgactacggatactttgagaatagtttccttatgttt 26089  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26090 aatggggtctcacaattaagttatatttaatgttccattaaatggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaa 26189  T
Q  218 tgccttgt 225  Q
    || |||||    
T  26190 tgtcttgt 26197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 26231 - 26287
Alignment:
Q  262 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26231 atgatacaaagccaaacccaatcaatatagattgactattagggcttattccaacaa 26287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 170; Significance: 5e-91; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 5736 - 5531
Alignment:
Q  18 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 117  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||||    
T  5736 atcatcagtctacccacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacatatactttaagaataatttccttatgttt 5637  T
Q  118 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 217  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  5636 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaaataaatcaataaagaaa 5537  T
Q  218 tgcctt 223  Q
    ||||||    
T  5536 tgcctt 5531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 5492 - 5435
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  5492 catgatacaaagccaaacccaaacaatatagattggctattagggcttacttcaacaa 5435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 142; Significance: 3e-74; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 230365 - 230545
Alignment:
Q  42 tctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttat 141  Q
    |||||||||||||||||||||||||||||||||||| |||||||||  ||||||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  230365 tctctatgctttaatgatatcccacttctcaataaatcttgactacaaatactttaagaatggtttccttatgtttaa-ggggtctcacaattaagttat 230463  T
Q  142 acttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 223  Q
    ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||    
T  230464 acttaatgttccattaaacggactaactattataagaactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 230545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 230584 - 230640
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  230584 catgatacaaagccaaacccaatcaatatagattggctattattgcttactccaaca 230640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 8446 - 8510
Alignment:
Q  161 ggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8446 ggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 8510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 8546 - 8603
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8546 catgatacaaagccgaacccaatcaatatagattggctattagggcttattccaacaa 8603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 23769 - 23826
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23769 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 23826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 16579 - 16522
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16579 catgatataaagccaaacccaatcaatatagattggctattagggcttattccaacaa 16522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 16648 - 16615
Alignment:
Q  192 gaaacaaaacaaaatcaataaagaaatgccttgt 225  Q
    ||| ||||||||||||||||||||||||||||||    
T  16648 gaancaaaacaaaatcaataaagaaatgccttgt 16615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 41 - 98
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  41 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaacaa 98  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 9000 - 8944
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 317  Q
    ||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  9000 catgatacaaagccaaacccattcaacatagattggctatttgggcttattccaaca 8944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 10202 - 10256
Alignment:
Q  261 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 315  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||    
T  10202 catgatacaaagtcaaactcaatcaatatagattggctattagagcttactccaa 10256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 206
Target Start/End: Original strand, 10127 - 10158
Alignment:
Q  175 agggactttattattttgaaacaaaacaaaat 206  Q
    ||||||||||||||||||||||||||||||||    
T  10127 agggactttattattttgaaacaaaacaaaat 10158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 317
Target Start/End: Original strand, 1 - 37
Alignment:
Q  281 aatcaatatagattggctattagggcttattccaaca 317  Q
    |||||||||||||||||||||||||||||||||||||    
T  1 aatcaatatagattggctattagggcttattccaaca 37  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 461
Target Start/End: Complemental strand, 8691 - 8615
Alignment:
Q  385 tttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 461  Q
    ||||||| ||| |||| | ||||||||| |||||||||||||  |||||| ||||||||| | ||||||||||||||    
T  8691 tttagctcgacttacagaagttttgatcacgattttatagatttttgcaatgttatgctggtattgtgtgtctattt 8615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 5930 - 5877
Alignment:
Q  265 atacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 318  Q
    |||||||| ||||| ||||||||||||||||||||||| | |||| ||||||||    
T  5930 atacaaagtcaaactcaatcaatatagattggctattatgacttactccaacaa 5877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 6516 - 6591
Alignment:
Q  383 attttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtcta 458  Q
    |||||||||  || ||||| | |||| |||||||||||||||||  |||||| ||||||||| | |||||||||||    
T  6516 attttagctcaacttacacttttttttatctcgattttatagatttttgcaatgttatgctggtattgtgtgtcta 6591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 92267 - 92194
Alignment:
Q  124 gtctcacaattaagttatacttaatgttcca-ttaaacggactaactattctagggactttattattttgaaac 196  Q
    ||||||| ||||||||||||||||||||||| |||||   ||||  |||||||| |||||||||| ||| ||||    
T  92267 gtctcacgattaagttatacttaatgttccatttaaaataactagatattctagagactttattactttaaaac 92194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 461
Target Start/End: Original strand, 9396 - 9460
Alignment:
Q  397 tacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 461  Q
    ||||||| ||||||| | ||||||||| ||  |||||| ||||||||| | ||||||||||||||    
T  9396 tacacattttttgattttgattttataaatttttgcaatgttatgctggtattgtgtgtctattt 9460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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