View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0942_low_54 (Length: 382)

Name: NF0942_low_54
Description: NF0942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0942_low_54
NF0942_low_54
[»] chr6 (80 HSPs)
chr6 (9-99)||(28715276-28715366)
chr6 (28-99)||(34595134-34595205)
chr6 (28-88)||(16766697-16766757)
chr6 (28-93)||(426508-426573)
chr6 (28-105)||(17841571-17841648)
chr6 (28-105)||(28152099-28152175)
chr6 (28-92)||(7977825-7977889)
chr6 (28-88)||(9107369-9107429)
chr6 (29-88)||(10770673-10770732)
chr6 (28-99)||(33001277-33001348)
chr6 (28-98)||(8776962-8777032)
chr6 (1-88)||(12696289-12696384)
chr6 (29-88)||(9911527-9911587)
chr6 (28-87)||(7801156-7801215)
chr6 (28-97)||(4877942-4878012)
chr6 (35-85)||(9522898-9522948)
chr6 (28-86)||(15489733-15489791)
chr6 (28-98)||(16833308-16833378)
chr6 (28-105)||(24645480-24645558)
chr6 (28-97)||(32978889-32978959)
chr6 (12-93)||(403858-403938)
chr6 (28-105)||(853841-853918)
chr6 (28-105)||(1191682-1191759)
chr6 (28-105)||(7377979-7378056)
chr6 (35-88)||(31384927-31384980)
chr6 (28-88)||(5970107-5970167)
chr6 (28-88)||(8365518-8365578)
chr6 (30-82)||(31959161-31959213)
chr6 (26-80)||(17302554-17302609)
chr6 (28-79)||(17435199-17435250)
chr6 (28-86)||(7938116-7938174)
chr6 (26-96)||(32511657-32511727)
chr6 (28-81)||(1681758-1681811)
chr6 (28-97)||(19040352-19040421)
chr6 (28-87)||(3209381-3209441)
chr6 (26-94)||(6898274-6898342)
chr6 (28-88)||(9025493-9025553)
chr6 (36-88)||(9617442-9617494)
chr6 (28-99)||(30851602-30851671)
chr6 (36-79)||(4118341-4118384)
chr6 (29-92)||(7265588-7265651)
chr6 (28-87)||(9629383-9629442)
chr6 (38-92)||(1700362-1700416)
chr6 (35-81)||(2117083-2117129)
chr6 (26-72)||(24115862-24115908)
chr6 (28-88)||(8713979-8714040)
chr6 (28-105)||(23771579-23771655)
chr6 (28-77)||(25010212-25010261)
chr6 (29-82)||(30866149-30866202)
chr6 (28-88)||(3398619-3398678)
chr6 (34-90)||(6214566-6214622)
chr6 (36-88)||(7930313-7930365)
chr6 (48-88)||(19369837-19369877)
chr6 (46-94)||(26402673-26402721)
chr6 (32-75)||(2224230-2224273)
chr6 (1-97)||(5626686-5626784)
chr6 (48-87)||(6751882-6751921)
chr6 (28-99)||(9658879-9658950)
chr6 (28-87)||(20371110-20371169)
chr6 (29-88)||(21395307-21395365)
chr6 (32-86)||(31429004-31429059)
chr6 (54-88)||(785454-785488)
chr6 (56-98)||(16388206-16388248)
chr6 (36-97)||(31579217-31579276)
chr6 (26-88)||(32320668-32320730)
chr6 (46-87)||(7027260-7027301)
chr6 (35-88)||(7151419-7151472)
chr6 (39-88)||(7973665-7973714)
chr6 (28-86)||(27904037-27904097)
chr6 (36-85)||(32299283-32299332)
chr6 (54-94)||(1334687-1334727)
chr6 (27-87)||(6327518-6327578)
chr6 (28-88)||(9027178-9027238)
chr6 (28-96)||(12868671-12868734)
chr6 (11-87)||(14155239-14155315)
chr6 (28-88)||(16488589-16488649)
chr6 (36-80)||(17341671-17341715)
chr6 (28-88)||(18367836-18367896)
chr6 (28-92)||(21924930-21924994)
chr6 (28-88)||(26562689-26562749)
[»] chr1 (90 HSPs)
chr1 (28-97)||(38078651-38078720)
chr1 (28-105)||(22515869-22515946)
chr1 (9-105)||(18190090-18190186)
chr1 (1-105)||(51409995-51410102)
chr1 (7-105)||(18337309-18337406)
chr1 (28-105)||(46348365-46348442)
chr1 (2-88)||(17778523-17778606)
chr1 (12-88)||(24577185-24577263)
chr1 (26-88)||(1486708-1486770)
chr1 (28-97)||(22881606-22881675)
chr1 (28-88)||(113299-113359)
chr1 (18-97)||(40258923-40259002)
chr1 (36-97)||(1815265-1815326)
chr1 (28-93)||(19058850-19058915)
chr1 (28-93)||(31672889-31672954)
chr1 (28-105)||(37598832-37598908)
chr1 (26-87)||(42359449-42359510)
chr1 (28-88)||(1704991-1705051)
chr1 (36-88)||(47989505-47989557)
chr1 (31-88)||(6612170-6612227)
chr1 (28-85)||(21378578-21378635)
chr1 (29-82)||(31015044-31015097)
chr1 (28-88)||(18556455-18556515)
chr1 (26-86)||(28273089-28273149)
chr1 (29-96)||(5927331-5927398)
chr1 (46-89)||(28663626-28663669)
chr1 (30-85)||(32461465-32461520)
chr1 (11-84)||(52284685-52284759)
chr1 (30-88)||(5944283-5944343)
chr1 (28-85)||(32434718-32434775)
chr1 (28-93)||(41877464-41877529)
chr1 (29-82)||(48450592-48450645)
chr1 (28-88)||(5376499-5376559)
chr1 (28-88)||(6332671-6332730)
chr1 (19-99)||(40181862-40181942)
chr1 (38-89)||(2283676-2283727)
chr1 (28-99)||(5898254-5898325)
chr1 (29-88)||(6427351-6427410)
chr1 (48-99)||(29163369-29163420)
chr1 (28-88)||(31694709-31694771)
chr1 (1-88)||(34371687-34371773)
chr1 (46-88)||(6427482-6427524)
chr1 (28-83)||(18471298-18471355)
chr1 (28-94)||(35702581-35702647)
chr1 (28-86)||(36878461-36878519)
chr1 (28-85)||(1864882-1864939)
chr1 (28-85)||(23738678-23738735)
chr1 (27-88)||(25272481-25272542)
chr1 (9-81)||(26830568-26830641)
chr1 (28-88)||(40917751-40917809)
chr1 (28-72)||(398780-398824)
chr1 (28-72)||(1262884-1262928)
chr1 (28-92)||(9103640-9103703)
chr1 (28-88)||(9629899-9629959)
chr1 (29-93)||(9709821-9709885)
chr1 (28-79)||(13011223-13011275)
chr1 (28-80)||(14359529-14359580)
chr1 (1-98)||(24334694-24334796)
chr1 (26-70)||(30847737-30847781)
chr1 (28-92)||(39953141-39953205)
chr1 (28-71)||(12443476-12443519)
chr1 (46-93)||(21620973-21621020)
chr1 (26-105)||(22781440-22781519)
chr1 (9-88)||(25361867-25361946)
chr1 (36-88)||(30173761-30173815)
chr1 (36-87)||(31667433-31667484)
chr1 (47-89)||(15449230-15449272)
chr1 (30-68)||(21366039-21366077)
chr1 (34-72)||(23531793-23531831)
chr1 (40-86)||(28170393-28170439)
chr1 (42-92)||(30749854-30749904)
chr1 (42-92)||(30771305-30771355)
chr1 (46-88)||(35919275-35919317)
chr1 (38-88)||(44482240-44482290)
chr1 (27-88)||(48148036-48148098)
chr1 (36-92)||(2288164-2288218)
chr1 (35-88)||(7918210-7918263)
chr1 (35-88)||(9828051-9828104)
chr1 (28-93)||(13436458-13436523)
chr1 (36-85)||(13997891-13997940)
chr1 (36-105)||(19637776-19637845)
chr1 (36-93)||(52903257-52903314)
chr1 (35-95)||(14332634-14332694)
chr1 (36-72)||(16164330-16164366)
chr1 (47-95)||(17007953-17008001)
chr1 (36-72)||(17425108-17425144)
chr1 (28-88)||(20157349-20157409)
chr1 (32-85)||(26526758-26526813)
chr1 (34-86)||(27471567-27471619)
chr1 (28-80)||(29144365-29144417)
[»] chr8 (62 HSPs)
chr8 (9-88)||(25566822-25566901)
chr8 (9-91)||(8342953-8343035)
chr8 (28-88)||(22651976-22652036)
chr8 (28-104)||(22595994-22596070)
chr8 (35-94)||(4948659-4948718)
chr8 (28-86)||(4298887-4298945)
chr8 (36-106)||(20873077-20873147)
chr8 (28-105)||(5813592-5813669)
chr8 (28-93)||(8343316-8343381)
chr8 (28-97)||(18407719-18407788)
chr8 (28-105)||(36450736-36450813)
chr8 (28-88)||(2572055-2572115)
chr8 (28-88)||(13436963-13437023)
chr8 (28-88)||(21465412-21465472)
chr8 (28-99)||(40332191-40332262)
chr8 (28-86)||(29447111-29447169)
chr8 (28-93)||(24613521-24613585)
chr8 (28-85)||(29510306-29510363)
chr8 (14-98)||(31514858-31514943)
chr8 (28-88)||(15816128-15816188)
chr8 (32-87)||(30077387-30077442)
chr8 (28-94)||(31236570-31236636)
chr8 (28-105)||(41831917-41831999)
chr8 (34-99)||(3025557-3025622)
chr8 (29-86)||(22197743-22197800)
chr8 (28-97)||(31556997-31557065)
chr8 (28-88)||(28745498-28745558)
chr8 (28-88)||(30271290-30271350)
chr8 (27-79)||(44694790-44694842)
chr8 (40-87)||(18170482-18170529)
chr8 (40-87)||(18634050-18634097)
chr8 (28-79)||(41838131-41838182)
chr8 (36-98)||(3677794-3677856)
chr8 (28-86)||(12606830-12606888)
chr8 (35-104)||(14134706-14134775)
chr8 (26-87)||(24669431-24669492)
chr8 (36-96)||(4786329-4786389)
chr8 (29-85)||(7442846-7442902)
chr8 (36-88)||(11927085-11927137)
chr8 (28-92)||(13844591-13844655)
chr8 (28-84)||(25192350-25192406)
chr8 (28-92)||(34897085-34897149)
chr8 (42-85)||(18964191-18964234)
chr8 (35-86)||(20679396-20679447)
chr8 (35-105)||(926770-926840)
chr8 (28-86)||(4673426-4673484)
chr8 (56-106)||(15023238-15023288)
chr8 (26-88)||(25172697-25172759)
chr8 (35-85)||(26434187-26434237)
chr8 (28-82)||(27213547-27213601)
chr8 (36-70)||(29519203-29519237)
chr8 (36-105)||(9414857-9414926)
chr8 (48-89)||(26902173-26902214)
chr8 (36-97)||(33405374-33405435)
chr8 (36-85)||(44505135-44505184)
chr8 (25-85)||(11803256-11803316)
chr8 (36-88)||(11944673-11944725)
chr8 (36-92)||(12985400-12985456)
chr8 (28-88)||(17468507-17468567)
chr8 (38-70)||(22493504-22493536)
chr8 (29-61)||(35519833-35519865)
chr8 (28-72)||(36934670-36934714)
[»] chr7 (66 HSPs)
chr7 (9-88)||(9778481-9778560)
chr7 (16-95)||(19213791-19213870)
chr7 (28-88)||(24339642-24339702)
chr7 (16-88)||(26033460-26033532)
chr7 (28-86)||(7438706-7438764)
chr7 (28-94)||(25481902-25481968)
chr7 (28-97)||(7197287-7197356)
chr7 (26-88)||(5409835-5409897)
chr7 (28-105)||(15680809-15680886)
chr7 (28-88)||(3991324-3991384)
chr7 (28-88)||(13770691-13770751)
chr7 (34-97)||(21880158-21880221)
chr7 (28-86)||(11061077-11061135)
chr7 (2-72)||(11700777-11700847)
chr7 (12-86)||(13300394-13300468)
chr7 (36-89)||(9408332-9408385)
chr7 (28-89)||(19992001-19992062)
chr7 (32-88)||(18215185-18215241)
chr7 (28-105)||(21864806-21864885)
chr7 (28-88)||(35861964-35862024)
chr7 (32-88)||(43027468-43027524)
chr7 (46-89)||(21560521-21560564)
chr7 (46-88)||(18039017-18039059)
chr7 (28-105)||(598208-598285)
chr7 (35-88)||(27945048-27945101)
chr7 (16-88)||(7058414-7058486)
chr7 (26-86)||(11665441-11665501)
chr7 (34-86)||(24146822-24146874)
chr7 (28-92)||(28155570-28155634)
chr7 (29-88)||(32094019-32094079)
chr7 (46-86)||(48438564-48438604)
chr7 (9-72)||(1656657-1656720)
chr7 (28-88)||(11272585-11272647)
chr7 (28-87)||(24105678-24105737)
chr7 (28-95)||(26733304-26733371)
chr7 (27-86)||(42720891-42720950)
chr7 (46-88)||(1885591-1885633)
chr7 (46-88)||(2334268-2334310)
chr7 (48-94)||(25956465-25956511)
chr7 (28-97)||(20549791-20549860)
chr7 (28-89)||(25822655-25822716)
chr7 (9-89)||(4024008-4024088)
chr7 (36-88)||(6028633-6028685)
chr7 (9-72)||(2424596-2424658)
chr7 (37-72)||(3938152-3938187)
chr7 (37-88)||(12843174-12843225)
chr7 (34-85)||(17851437-17851488)
chr7 (10-65)||(23746892-23746947)
chr7 (37-72)||(27980805-27980840)
chr7 (34-96)||(1401031-1401093)
chr7 (28-86)||(19206050-19206108)
chr7 (39-97)||(33994223-33994281)
chr7 (36-86)||(38143231-38143281)
chr7 (28-102)||(41020496-41020570)
chr7 (28-77)||(11831432-11831481)
chr7 (42-95)||(18213025-18213078)
chr7 (42-86)||(640127-640171)
chr7 (38-102)||(3554491-3554555)
chr7 (46-78)||(13557750-13557782)
chr7 (46-86)||(17257990-17258030)
chr7 (32-88)||(21930633-21930688)
chr7 (48-88)||(22602709-22602749)
chr7 (28-72)||(29787384-29787428)
chr7 (28-88)||(32308120-32308180)
chr7 (42-94)||(39138458-39138510)
chr7 (28-92)||(40287352-40287415)
[»] chr2 (62 HSPs)
chr2 (26-97)||(2438709-2438780)
chr2 (28-105)||(37558977-37559054)
chr2 (31-105)||(5040735-5040811)
chr2 (25-93)||(18255974-18256042)
chr2 (36-105)||(15972881-15972950)
chr2 (36-97)||(30404840-30404901)
chr2 (23-88)||(30717529-30717594)
chr2 (28-105)||(38117141-38117218)
chr2 (11-88)||(44860303-44860380)
chr2 (26-86)||(11223864-11223924)
chr2 (28-88)||(20539673-20539733)
chr2 (28-99)||(6940255-6940326)
chr2 (26-97)||(18841003-18841074)
chr2 (28-93)||(19536391-19536457)
chr2 (28-93)||(21624266-21624332)
chr2 (28-88)||(974747-974807)
chr2 (36-92)||(18421971-18422027)
chr2 (28-80)||(21374706-21374758)
chr2 (46-105)||(12224241-12224300)
chr2 (35-105)||(5367199-5367269)
chr2 (35-88)||(12668422-12668475)
chr2 (35-88)||(15657871-15657924)
chr2 (28-93)||(20473322-20473387)
chr2 (35-88)||(33153431-33153484)
chr2 (30-87)||(38442309-38442366)
chr2 (29-85)||(18420436-18420492)
chr2 (28-88)||(24894389-24894449)
chr2 (28-88)||(36756343-36756403)
chr2 (28-86)||(14996224-14996283)
chr2 (28-99)||(20242715-20242786)
chr2 (46-105)||(28596487-28596546)
chr2 (28-87)||(30335417-30335476)
chr2 (37-88)||(37419752-37419803)
chr2 (48-99)||(43585993-43586044)
chr2 (27-81)||(12940941-12940995)
chr2 (46-88)||(23058441-23058483)
chr2 (28-82)||(34221502-34221556)
chr2 (28-97)||(31808077-31808146)
chr2 (28-105)||(37411226-37411303)
chr2 (36-85)||(44605141-44605190)
chr2 (9-72)||(18631421-18631485)
chr2 (28-72)||(28677909-28677953)
chr2 (28-80)||(39323264-39323316)
chr2 (34-93)||(34691799-34691858)
chr2 (34-93)||(34714211-34714270)
chr2 (34-88)||(4882695-4882749)
chr2 (28-86)||(21091723-21091781)
chr2 (28-86)||(42832277-42832335)
chr2 (48-85)||(14450797-14450834)
chr2 (36-105)||(18570980-18571049)
chr2 (35-88)||(18622613-18622666)
chr2 (28-85)||(29176495-29176552)
chr2 (50-87)||(44635520-44635557)
chr2 (29-73)||(1886892-1886936)
chr2 (28-72)||(21616762-21616806)
chr2 (28-72)||(21782833-21782877)
chr2 (28-84)||(23718026-23718082)
chr2 (28-84)||(24105698-24105754)
chr2 (36-75)||(29367381-29367421)
chr2 (29-93)||(31018591-31018655)
chr2 (48-92)||(33884071-33884115)
chr2 (28-88)||(34784981-34785041)
[»] chr4 (60 HSPs)
chr4 (16-114)||(54579996-54580094)
chr4 (28-105)||(23292968-23293045)
chr4 (1-88)||(12895115-12895198)
chr4 (27-105)||(28964230-28964308)
chr4 (28-96)||(31800469-31800537)
chr4 (28-97)||(21945503-21945572)
chr4 (16-97)||(29205432-29205513)
chr4 (28-99)||(49431025-49431097)
chr4 (11-97)||(4157133-4157218)
chr4 (28-105)||(38846994-38847071)
chr4 (28-88)||(3947765-3947825)
chr4 (28-95)||(2361967-2362034)
chr4 (33-88)||(11596351-11596406)
chr4 (28-86)||(24613702-24613760)
chr4 (28-97)||(715595-715667)
chr4 (28-97)||(752921-752993)
chr4 (36-105)||(12895256-12895325)
chr4 (28-88)||(28084521-28084582)
chr4 (28-88)||(30298946-30299007)
chr4 (28-88)||(30327814-30327875)
chr4 (28-96)||(8423709-8423777)
chr4 (47-94)||(12797331-12797378)
chr4 (46-93)||(42640547-42640594)
chr4 (36-85)||(6485613-6485662)
chr4 (29-74)||(14465088-14465133)
chr4 (12-69)||(18844491-18844548)
chr4 (28-105)||(34306786-34306862)
chr4 (28-88)||(19482668-19482728)
chr4 (28-88)||(51701258-51701318)
chr4 (28-79)||(11651142-11651193)
chr4 (48-99)||(13307897-13307948)
chr4 (47-94)||(16073413-16073460)
chr4 (36-86)||(28000743-28000794)
chr4 (47-97)||(4157455-4157505)
chr4 (47-93)||(6879459-6879505)
chr4 (10-72)||(21873386-21873448)
chr4 (10-72)||(21929247-21929309)
chr4 (35-97)||(35157975-35158037)
chr4 (28-88)||(12708146-12708207)
chr4 (36-97)||(40179626-40179687)
chr4 (1-88)||(50280852-50280943)
chr4 (34-86)||(847957-848009)
chr4 (36-88)||(27706176-27706228)
chr4 (17-105)||(35161025-35161113)
chr4 (28-87)||(15029765-15029824)
chr4 (28-81)||(20633485-20633535)
chr4 (28-79)||(37203264-37203315)
chr4 (34-88)||(30982877-30982931)
chr4 (34-72)||(32915621-32915658)
chr4 (28-89)||(35723382-35723444)
chr4 (6-85)||(37496680-37496761)
chr4 (34-72)||(40774287-40774325)
chr4 (48-102)||(44362686-44362740)
chr4 (28-86)||(47263986-47264044)
chr4 (47-88)||(4383386-4383427)
chr4 (28-84)||(24543981-24544038)
chr4 (48-92)||(13117449-13117493)
chr4 (36-88)||(16303265-16303317)
chr4 (34-86)||(33950142-33950194)
chr4 (47-79)||(40481655-40481687)
[»] chr5 (66 HSPs)
chr5 (28-105)||(21191038-21191115)
chr5 (29-99)||(21576733-21576803)
chr5 (28-88)||(31084323-31084383)
chr5 (28-98)||(6247622-6247692)
chr5 (26-88)||(39698539-39698601)
chr5 (28-105)||(42893360-42893437)
chr5 (28-88)||(21522750-21522810)
chr5 (28-88)||(21533316-21533376)
chr5 (28-87)||(8420027-8420086)
chr5 (28-97)||(15883987-15884057)
chr5 (28-89)||(10298569-10298630)
chr5 (28-88)||(7677705-7677765)
chr5 (28-88)||(13287398-13287458)
chr5 (28-92)||(33178025-33178089)
chr5 (9-88)||(6471888-6471967)
chr5 (25-80)||(15405062-15405117)
chr5 (28-82)||(14674269-14674323)
chr5 (28-89)||(41633735-41633796)
chr5 (1-88)||(5894832-5894913)
chr5 (29-85)||(17177025-17177081)
chr5 (28-88)||(19579701-19579761)
chr5 (28-88)||(21542030-21542090)
chr5 (28-83)||(7218271-7218326)
chr5 (29-96)||(24906292-24906359)
chr5 (28-86)||(21351906-21351964)
chr5 (36-102)||(28588659-28588725)
chr5 (29-97)||(30502378-30502446)
chr5 (29-97)||(30542721-30542789)
chr5 (28-88)||(37328843-37328903)
chr5 (28-84)||(43001800-43001856)
chr5 (28-83)||(12159952-12160007)
chr5 (28-99)||(27932235-27932306)
chr5 (28-86)||(30135313-30135372)
chr5 (38-105)||(43564891-43564958)
chr5 (28-87)||(15382477-15382538)
chr5 (10-72)||(32766958-32767020)
chr5 (28-89)||(41995471-41995530)
chr5 (43-97)||(42029767-42029821)
chr5 (28-88)||(3966503-3966563)
chr5 (31-94)||(14422907-14422968)
chr5 (36-92)||(17925167-17925223)
chr5 (28-88)||(30183549-30183609)
chr5 (25-89)||(40131618-40131682)
chr5 (34-97)||(23012398-23012461)
chr5 (26-105)||(32630717-32630796)
chr5 (1-88)||(11685910-11685999)
chr5 (46-88)||(12199948-12199990)
chr5 (26-88)||(22423811-22423873)
chr5 (25-105)||(24273015-24273092)
chr5 (25-105)||(24389122-24389199)
chr5 (25-97)||(6770540-6770610)
chr5 (28-97)||(16203785-16203854)
chr5 (28-97)||(18421831-18421900)
chr5 (36-85)||(38749565-38749614)
chr5 (28-88)||(2436922-2436982)
chr5 (25-68)||(2952265-2952309)
chr5 (36-88)||(16374341-16374393)
chr5 (25-80)||(17088281-17088337)
chr5 (28-60)||(18316952-18316984)
chr5 (28-88)||(18592073-18592133)
chr5 (46-86)||(19167577-19167617)
chr5 (28-88)||(21814261-21814321)
chr5 (28-76)||(22299492-22299539)
chr5 (36-72)||(30098334-30098370)
chr5 (39-83)||(30136678-30136722)
chr5 (28-88)||(41091256-41091316)
[»] chr3 (64 HSPs)
chr3 (16-92)||(51206348-51206424)
chr3 (9-105)||(28917974-28918080)
chr3 (28-105)||(10954952-10955029)
chr3 (28-105)||(55401075-55401152)
chr3 (25-88)||(1509536-1509599)
chr3 (26-84)||(26508108-26508166)
chr3 (28-88)||(14209113-14209173)
chr3 (28-88)||(27505246-27505306)
chr3 (28-88)||(49651785-49651845)
chr3 (1-97)||(24633391-24633489)
chr3 (31-88)||(14832102-14832159)
chr3 (27-88)||(21256985-21257046)
chr3 (28-89)||(34910317-34910378)
chr3 (28-84)||(4987294-4987350)
chr3 (1-93)||(7928424-7928515)
chr3 (28-88)||(34185122-34185182)
chr3 (28-87)||(21479118-21479177)
chr3 (2-97)||(40993325-40993423)
chr3 (2-97)||(20503437-20503534)
chr3 (28-93)||(16000010-16000075)
chr3 (28-97)||(26492195-26492264)
chr3 (28-85)||(55212963-55213020)
chr3 (28-88)||(14216892-14216952)
chr3 (28-88)||(14223021-14223081)
chr3 (28-88)||(14829690-14829749)
chr3 (28-88)||(15796293-15796353)
chr3 (28-88)||(28812515-28812575)
chr3 (36-88)||(39756244-39756296)
chr3 (28-87)||(8587021-8587080)
chr3 (9-88)||(14027988-14028067)
chr3 (28-99)||(35222938-35223009)
chr3 (28-86)||(10268487-10268545)
chr3 (36-93)||(25775516-25775574)
chr3 (34-88)||(25948886-25948940)
chr3 (28-93)||(8383257-8383322)
chr3 (27-87)||(8593135-8593196)
chr3 (28-81)||(35994744-35994796)
chr3 (34-87)||(38731224-38731277)
chr3 (28-88)||(750617-750677)
chr3 (28-88)||(3164024-3164084)
chr3 (37-89)||(8930828-8930880)
chr3 (46-102)||(14338468-14338524)
chr3 (29-80)||(11610522-11610573)
chr3 (28-71)||(14979181-14979224)
chr3 (47-105)||(7171520-7171578)
chr3 (28-98)||(10335275-10335345)
chr3 (30-88)||(41961649-41961707)
chr3 (46-99)||(3865692-3865745)
chr3 (28-97)||(8789540-8789609)
chr3 (27-72)||(9624640-9624685)
chr3 (11-92)||(13414452-13414533)
chr3 (28-88)||(14747561-14747622)
chr3 (35-104)||(18426956-18427025)
chr3 (28-88)||(4990966-4991026)
chr3 (14-98)||(7614404-7614488)
chr3 (13-104)||(11251963-11252052)
chr3 (2-63)||(40052304-40052367)
chr3 (28-93)||(32400702-32400764)
chr3 (26-81)||(34307786-34307841)
chr3 (35-85)||(17005621-17005671)
chr3 (23-88)||(15314875-15314940)
chr3 (26-87)||(33359759-33359820)
chr3 (16-97)||(45451541-45451622)
chr3 (40-72)||(39002044-39002076)
[»] scaffold0652 (1 HSPs)
scaffold0652 (28-105)||(444-521)
[»] scaffold0053 (1 HSPs)
scaffold0053 (28-105)||(8798-8875)
[»] scaffold0050 (1 HSPs)
scaffold0050 (28-105)||(70278-70355)
[»] scaffold0223 (1 HSPs)
scaffold0223 (28-88)||(20172-20232)
[»] scaffold0011 (1 HSPs)
scaffold0011 (26-86)||(17750-17810)
[»] scaffold0361 (1 HSPs)
scaffold0361 (28-105)||(14530-14604)
[»] scaffold0103 (1 HSPs)
scaffold0103 (28-79)||(51811-51862)
[»] scaffold0027 (1 HSPs)
scaffold0027 (28-87)||(46682-46741)
[»] scaffold0722 (1 HSPs)
scaffold0722 (28-102)||(7017-7091)
[»] scaffold0793 (1 HSPs)
scaffold0793 (28-97)||(4871-4943)
[»] scaffold0136 (1 HSPs)
scaffold0136 (36-88)||(3848-3900)
[»] scaffold0025 (1 HSPs)
scaffold0025 (25-88)||(23766-23830)
[»] scaffold0021 (1 HSPs)
scaffold0021 (28-84)||(130482-130538)
[»] scaffold0004 (3 HSPs)
scaffold0004 (29-86)||(123626-123686)
scaffold0004 (40-89)||(83172-83221)
scaffold0004 (28-80)||(92807-92859)
[»] scaffold0083 (1 HSPs)
scaffold0083 (54-99)||(45518-45563)
[»] scaffold0376 (1 HSPs)
scaffold0376 (17-89)||(6301-6373)
[»] scaffold0171 (2 HSPs)
scaffold0171 (28-88)||(23420-23480)
scaffold0171 (46-88)||(23529-23571)
[»] scaffold0122 (1 HSPs)
scaffold0122 (28-96)||(8010-8077)
[»] scaffold0003 (1 HSPs)
scaffold0003 (28-88)||(241594-241654)
[»] scaffold0306 (1 HSPs)
scaffold0306 (28-87)||(13400-13459)
[»] scaffold0152 (1 HSPs)
scaffold0152 (28-87)||(21868-21927)
[»] scaffold0066 (1 HSPs)
scaffold0066 (28-75)||(33375-33422)
[»] scaffold0018 (1 HSPs)
scaffold0018 (28-86)||(178819-178878)
[»] scaffold0049 (1 HSPs)
scaffold0049 (29-86)||(63774-63831)
[»] scaffold0512 (1 HSPs)
scaffold0512 (65-105)||(5018-5058)
[»] scaffold0450 (1 HSPs)
scaffold0450 (28-88)||(8634-8694)
[»] scaffold0022 (1 HSPs)
scaffold0022 (36-88)||(99901-99953)
[»] scaffold0020 (1 HSPs)
scaffold0020 (28-88)||(135311-135371)
[»] scaffold0044 (1 HSPs)
scaffold0044 (37-84)||(53189-53236)
[»] scaffold0019 (1 HSPs)
scaffold0019 (28-88)||(71723-71785)
[»] scaffold0008 (1 HSPs)
scaffold0008 (29-88)||(263371-263430)
[»] scaffold0123 (1 HSPs)
scaffold0123 (26-88)||(44524-44586)
[»] scaffold0057 (1 HSPs)
scaffold0057 (28-74)||(24025-24071)
[»] scaffold0236 (1 HSPs)
scaffold0236 (27-88)||(25767-25828)
[»] scaffold0110 (1 HSPs)
scaffold0110 (36-85)||(28858-28907)
[»] scaffold0036 (1 HSPs)
scaffold0036 (35-88)||(9746-9799)
[»] scaffold0007 (1 HSPs)
scaffold0007 (28-81)||(225274-225327)
[»] scaffold0246 (1 HSPs)
scaffold0246 (47-79)||(19594-19626)


Alignment Details
Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 80)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 28715276 - 28715366
Alignment:
Q  9 cggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    ||||||||| ||||| |||||||| ||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| |||||||||||    
T  28715276 cggacacgatacggacactgacacggctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacacgacacgt 28715366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 34595134 - 34595205
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    |||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  34595134 gacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgt 34595205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 16766697 - 16766757
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  16766697 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgt 16766757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 426573 - 426508
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  426573 gacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcggacacg 426508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 17841648 - 17841571
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||||||||||| |||||||||||||||| | |||||||||||||| |||||||| |||||||| || |||||    
T  17841648 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcggacacgacatgtgtccga 17841571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 28152099 - 28152175
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||| |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  28152099 gacaaagctaataatttgaaaa-atcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccga 28152175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 7977889 - 7977825
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  7977889 gacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcggacac 7977825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 9107429 - 9107369
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  9107429 gacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgt 9107369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 10770732 - 10770673
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  10770732 acacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgt 10770673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 33001348 - 33001277
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||| | |||||||||||| |||||||||||    
T  33001348 gacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcggacacgacacgt 33001277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 8777032 - 8776962
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacg 98  Q
    |||||| |||||||||| ||||||||||| |||||| ||||||||||||||| ||||||| ||||||||||    
T  8777032 gacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacacgacacg 8776962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12696289 - 12696384
Alignment:
Q  1 tacggacacggacacgacacggaaactgaca--------cagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||||||||| |||||||        ||||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||    
T  12696289 tacggacacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgt 12696384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 9911587 - 9911527
Alignment:
Q  29 acacagctaataattttaaa-aaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  9911587 acacagctaataatttaaaagaaatcacataattcagtgtaattacaagtgtcggtgtcgt 9911527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 7801215 - 7801156
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    |||||| |||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  7801215 gacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 7801156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 4877942 - 4878012
Alignment:
Q  28 gacacagctaataattttaaaaaa-tcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||||||||||| |||||| |||||||||| | | ||||||||||||||||||||| |||||||||    
T  4877942 gacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcggtgtcggacacgacac 4878012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 9522898 - 9522948
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgt 9522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 15489791 - 15489733
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||| |||||||||| ||||||| ||| |||||||||||||||||||||||||||||    
T  15489791 gacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 16833308 - 16833378
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacg 98  Q
    |||||| |||||||||| ||||||||||||| |||| |||||||||||||||||||||   ||||||||||    
T  16833308 gacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgttagacacgacacg 16833378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 24645480 - 24645558
Alignment:
Q  28 gacacagctaataattttaaaa-aatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||||||||||| |||| |||||||||||||| | || |||||||||||||||||  ||||||||||| |||||    
T  24645480 gacacagctaataatttgaaaaaaatcacataattcagtatagttacaagtgtcggtgtcagacacgacacgtgtccga 24645558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 32978959 - 32978889
Alignment:
Q  28 gacacagctaataattttaaaaaat-cacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||||||||||| ||||||  ||||||||| | ||||||||||||||||||||||| |||||||||    
T  32978959 gacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcggtgtcggacacgacac 32978889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 403938 - 403858
Alignment:
Q  12 acacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    |||||| ||||| | |||||||| ||||||||| |||||||||||||||| | ||||| ||||||||||||||||| |||||    
T  403938 acacgatacggacattgacacag-taataatttgaaaaaatcacataatttagtgtaactacaagtgtcggtgtcggacacg 403858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 853918 - 853841
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||| |||||||||| |||||||||||||||| | || |||||||||||||||||||| | |||||| || |||||    
T  853918 gacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtcggatacgacatgtgtccga 853841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 1191759 - 1191682
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||||||||||| ||||| ||||| |||||| ||||||||||||||||| ||| | ||||||| ||| |||||    
T  1191759 gacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcgatgttggacacgacgcgtgtccga 1191682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 7377979 - 7378056
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||| ||||| ||||| | ||||||||||||||||||||||||| | |||||||||||| |||||||| | ||||||    
T  7377979 gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacgacatgcatccga 7378056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 31384927 - 31384980
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| |||||||    
T  31384927 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgt 31384980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 5970167 - 5970107
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||| ||| ||||||||    
T  5970167 gacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgt 5970107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 8365578 - 8365518
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||| |||| ||||||||||||  ||||||||||||||||||||||||    
T  8365578 gacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgt 8365518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 31959161 - 31959213
Alignment:
Q  30 cacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcgg 82  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  31959161 cacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcgg 31959213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 17302554 - 17302609
Alignment:
Q  26 ctgacacagctaataattttaaaa-aatcacataattcaatgtaattacaagtgtc 80  Q
    |||||||| |||||||||| |||| |||||||||||||||||||||||||||||||    
T  17302554 ctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtc 17302609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 17435199 - 17435250
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgt 79  Q
    |||| |||||||||||||||||||| |||||||||| |||||||||||||||    
T  17435199 gacatagctaataattttaaaaaattacataattcagtgtaattacaagtgt 17435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 7938116 - 7938174
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||||||||||||| ||||||||| |||||| | |||||||| |||||||||||||    
T  7938116 gacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 32511727 - 32511657
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgaca 96  Q
    ||||||| ||||||||||| | |||||||||||||||| |||||||| |||||| ||||||| | ||||||    
T  32511727 ctgacaccgctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgtcggatacgaca 32511657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 1681758 - 1681811
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcg 81  Q
    |||||| |||||||||| |||||||||| ||||||| |||||||||||||||||    
T  1681758 gacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 19040352 - 19040421
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||| ||||||||||| | |||||||||||||||| |||||||| | ||||| |||||| |||||||||    
T  19040352 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacacgacac 19040421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 3209381 - 3209441
Alignment:
Q  28 gacacagctaataattttaaaa-aatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||||||||||||||| |||| |||||||||||| | ||| |||||||||||||||||||    
T  3209381 gacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcggtgtcg 3209441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 6898342 - 6898274
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacga 94  Q
    |||||||  |||||||||| || |||| |||||||| | ||||||||||||||||||||||| ||||||    
T  6898342 ctgacacgtctaataatttgaacaaattacataattaagtgtaattacaagtgtcggtgtcggacacga 6898274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 9025553 - 9025493
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||||||||||| | |||||||||||||||| |||||||| | |||||||||||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgt 9025493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 9617442 - 9617494
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||| | ||||||||||||||||||||||||| | |||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgt 9617494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 30851602 - 30851671
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    ||||| ||||||||||| | |||||||||  |||||||||||||| | |||||||||||| |||||||||||    
T  30851602 gacactgctaataatttaagaaaatcaca--attcaatgtaattatatgtgtcggtgtcggacacgacacgt 30851671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 4118384 - 4118341
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgt 79  Q
    ||||||||| |||||||||||||||| |||||||||||||||||    
T  4118384 taataatttgaaaaaatcacataattaaatgtaattacaagtgt 4118341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 7265651 - 7265588
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    |||| ||||||||||| | |||||||||||||||| |||||||| | |||||||||||| ||||    
T  7265651 acaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 7265588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 9629383 - 9629442
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||| || |||||||| | ||||||||||||||||||||||||| | ||||||||||||    
T  9629383 gacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9629442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 1700362 - 1700416
Alignment:
Q  38 ataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||||| ||||||||||||| |||| |||||||| |||||||||||||| ||||    
T  1700362 ataatttaaaaaaatcacatatttcagtgtaattataagtgtcggtgtcggacac 1700416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 2117083 - 2117129
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcg 81  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  2117083 ctaataatttgaaaaaatcacataattcaatgcaattataagtgtcg 2117129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 24115908 - 24115862
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    |||||||| |||||||||| |||||||||||||||||||| ||||||    
T  24115908 ctgacacaactaataatttcaaaaaatcacataattcaatataatta 24115862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 8713979 - 8714040
Alignment:
Q  28 gacacagctaataattttaaaa-aatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||| ||||||||| |||| |||||||||||||| ||||||||||| ||| ||||||||    
T  8713979 gacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgt 8714040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 23771579 - 23771655
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||| ||||||||| ||||||| | ||| |||| ||||||||||| ||||||||||| |||||||| || |||||    
T  23771579 gacacagttaataattt-aaaaaattatatacttcagtgtaattacaaatgtcggtgtcggacacgacatgtgtccga 23771655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 25010261 - 25010212
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagt 77  Q
    ||||||||||||||||| ||||||||||||||||||  || |||||||||    
T  25010261 gacacagctaataatttgaaaaaatcacataattcagcgttattacaagt 25010212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 30866202 - 30866149
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcgg 82  Q
    |||| ||||||||||| | ||||||||||||||||||||||||| | |||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 3398619 - 3398678
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||| ||| |||||||| |||||||| |||||||| |||| ||||||||||    
T  3398619 gacacagctaataa-tttgaaaaatcatataattcagtgtaattataagtatcggtgtcgt 3398678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 6214566 - 6214622
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtac 90  Q
    |||| ||||||||||||| ||||||||| | |||||||| | |||||||||||||||    
T  6214566 gctagtaattttaaaaaaacacataattaagtgtaattagatgtgtcggtgtcgtac 6214622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 7930313 - 7930365
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||| |||||||||||||||| | || |||| ||||||||||||||||    
T  7930313 taataatttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtcgt 7930365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 19369837 - 19369877
Alignment:
Q  48 aaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  19369837 aaaatgacataattcaatgtaatcacaagtgtcggtgtcgt 19369877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 26402721 - 26402673
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacga 94  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||||||    
T  26402721 aaaaaatgacataattcagtgtaatcacaagtgtcggtgtcggacacga 26402673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 2224230 - 2224273
Alignment:
Q  32 cagctaataattttaaaaaatcacataattcaatgtaattacaa 75  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||    
T  2224230 cagctaataatttaaaaaaatcatataattcagtgtaattacaa 2224273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 5626784 - 5626686
Alignment:
Q  1 tacggacacggacacgacacggaaact--gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    |||||||||||||||||||| || ||   |||||| |||||  ||||| |||||||| || |||| ||||| || | |||||||||||| |||||||||    
T  5626784 tacggacacggacacgacactgacacgccgacacaactaatttttttagaaaatcacttagttcagtgtaaatatatgtgtcggtgtcggacacgacac 5626686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 6751921 - 6751882
Alignment:
Q  48 aaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  6751921 aaaatgacataattcaatgtaatcacaagtgtcggtgtcg 6751882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 9658879 - 9658950
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    ||||| ||||||||||| | |||||||||||||||| |||||||| |  |||||||||   |||||||||||    
T  9658879 gacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgttagacacgacacgt 9658950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 20371169 - 20371110
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||| ||||||||||| | |||||||||||| ||||||| |||| | ||||||||||||    
T  20371169 gacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgtcg 20371110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 21395365 - 21395307
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||| ||||||||||| | ||||| |||||||| | ||||||||||||||||||||||||    
T  21395365 acaccgctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcgt 21395307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 31429059 - 31429004
Alignment:
Q  32 cagctaataattttaaaaaa-tcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||||||||| |||||| |||||||||||| ||||||||||| ||| ||||||    
T  31429059 cagctaataatttaaaaaaaatcacataattcagtgtaattacaaatgtaggtgtc 31429004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 785488 - 785454
Alignment:
Q  54 acataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||||||||||||||||    
T  785488 acataattcaatgtaatcacaagtgtcggtgtcgt 785454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 16388248 - 16388206
Alignment:
Q  56 ataattcaatgtaattacaagtgtcggtgtcgtacacgacacg 98  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||    
T  16388248 ataattcagtgtaattacaagtgtcggtgtcggacacggcacg 16388206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 31579276 - 31579217
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||| | |||||||||||||||| |||||||  | |||||||||||| |||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaatt--atgtgtcggtgtcggacacgacac 31579217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 32320730 - 32320668
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||| | ||||||||| | |||||||||||||||||||| |||| | || ||||||||||    
T  32320730 ctgacaccgttaataatttgataaaatcacataattcaatgtcattatatgtatcggtgtcgt 32320668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 7027260 - 7027301
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    |||||||||||||||||| |||||||| | ||||||||||||    
T  7027260 aaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 7151419 - 7151472
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||| |||||||||||||||| | |||||||| | |||| ||||||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgtcgt 7151472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 7973665 - 7973714
Alignment:
Q  39 taattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| ||||||| |||||||| | |||||||| |||||||||||||||    
T  7973665 taatttaaaaaaattacataattaagtgtaattataagtgtcggtgtcgt 7973714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 27904097 - 27904037
Alignment:
Q  28 gacacagctaataattttaaaaaat--cacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||| |||||||||||| ||||||   ||||||||||| ||||||||||| ||||||||||    
T  27904097 gacatagctaataatttaaaaaaaaaacacataattcagtgtaattacaaatgtcggtgtc 27904037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 32299283 - 32299332
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||||||| | ||||||||||||||||||||| ||| | ||||||||||    
T  32299283 taataatttgagaaaatcacataattcaatgtagttatacgtgtcggtgt 32299332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 1334687 - 1334727
Alignment:
Q  54 acataattcaatgtaattacaagtgtcggtgtcgtacacga 94  Q
    ||||||||||||||||| |||| ||||||||||| ||||||    
T  1334687 acataattcaatgtaatcacaaatgtcggtgtcgaacacga 1334727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 6327578 - 6327518
Alignment:
Q  27 tgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||| || ||||||||| ||||||| | |||||| | ||||||||||||||||| |||||    
T  6327578 tgacatagttaataatttgaaaaaattatataattaagtgtaattacaagtgtcgatgtcg 6327518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 9027178 - 9027238
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||||||||||| | | |||||||||||||  |||||||| | |||||||||||||    
T  9027178 gacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgt 9027238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 12868734 - 12868671
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgaca 96  Q
    ||||||| ||||||||| |||||||||||     |||| ||||||| ||||||||||||| ||||||||    
T  12868734 gacacagttaataatttgaaaaaatcaca-----caatataattactagtgtcggtgtcggacacgaca 12868671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 14155315 - 14155239
Alignment:
Q  11 gacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    |||||||||| || |||||||| | | ||||||| | ||||||||||||| || ||| |||||| |||| |||||||    
T  14155315 gacacgacacagacactgacaccgatcataatttgagaaaatcacataatacagtgtgattacatgtgttggtgtcg 14155239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 16488649 - 16488589
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||  ||||| ||||||||| ||| || |||||||| | |||||||||||||    
T  16488649 gacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgt 16488589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 17341715 - 17341671
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtc 80  Q
    ||||||||| | |||||||||||||||| |||||||| |||||||    
T  17341715 taataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 18367836 - 18367896
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||  ||||| ||||||||| ||| || |||||||| | |||||||||||||    
T  18367836 gacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgt 18367896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 21924994 - 21924930
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||| ||||||||||| | || |||| |||||||| |||||||| | |||||||||||| ||||    
T  21924994 gacactgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcggacac 21924930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 26562689 - 26562749
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||||| ||||| | |||||||||||||||| |||||||| | |||||| ||||||    
T  26562689 gacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgt 26562749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 38078720 - 38078651
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38078720 gacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacacgacac 38078651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 22515946 - 22515869
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||||||    
T  22515946 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccga 22515869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 18190186 - 18190090
Alignment:
Q  9 cggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||| |||||||||| ||||||||||||||||| ||||  |||| |||||| |||||    
T  18190186 cggacacgacacggatactgacacacctaataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtcagacacaacacgtgtccga 18190090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 51409995 - 51410102
Alignment:
Q  1 tacggacacggacacgacacggaaa--ctgacacagctaataattttaaaa-aatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||||||||| | ||||| |  | |||||| |||||||||| |||| |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  51409995 tacggacacggacacaaaacggacatgccgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacac 51410094  T
Q  98 gtatccga 105  Q
    ||||||||    
T  51410095 gtatccga 51410102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 18337309 - 18337406
Alignment:
Q  7 cacggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||| |||||||||| |||||||  || |||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| |||||| |||||    
T  18337309 cacggatacgacacggacactgacat-gccaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccga 18337406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 46348442 - 46348365
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||||||||||| ||||||||| |||||| | ||||||||||||||||||||||| ||||||||||| |||||    
T  46348442 gacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccga 46348365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 17778523 - 17778606
Alignment:
Q  2 acggacacggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| |||||||||||||||| || ||||||||||||||||| |||||||||||||   || ||||||||||||||||||||||||    
T  17778523 acggatacggacacgacacggagacagacacagctaataatttgaaaaaatcacata---cagtgtaattacaagtgtcggtgtcgt 17778606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 24577263 - 24577185
Alignment:
Q  12 acacgacacggaaac--tgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||| ||  ||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  24577263 acacgacacggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgt 24577185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 1486770 - 1486708
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  1486770 ctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgt 1486708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 22881675 - 22881606
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    |||||| |||||||||| |||||||||||||||| | ||||||||||||||||||||||| |||||||||    
T  22881675 gacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacac 22881606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 113299 - 113359
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  113299 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgt 113359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 40259002 - 40258923
Alignment:
Q  18 cacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    |||||| || ||||||  ||||||||| |||||||||||||||||| ||||||||||||||||||||||  |||||||||    
T  40259002 cacggacaccgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcagacacgacac 40258923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 1815265 - 1815326
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||    
T  1815265 taattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtccgacacgacac 1815326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 19058915 - 19058850
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    ||||||||||||||||| |||| || |||||||||| ||||||||||||||||||||||| |||||    
T  19058915 gacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcggacacg 19058850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 31672954 - 31672889
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||||||| ||||||||| |||||    
T  31672954 gacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtcggacacg 31672889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 37598832 - 37598908
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||| |||||||||| ||||||||||| |||||| |||||||| |||||||||||||| ||||||||||| |||||    
T  37598832 gacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccga 37598908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 42359510 - 42359449
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    |||||||| |||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  42359510 ctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 42359449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 1705051 - 1704991
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  1705051 gacacatctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgt 1704991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 47989505 - 47989557
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgt 47989557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 6612227 - 6612170
Alignment:
Q  31 acagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||| ||||||||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  6612227 acagttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgt 6612170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 21378578 - 21378635
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    |||||||||||||| || ||||||| |||||||||| |||||||||||||||||||||    
T  21378578 gacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 31015044 - 31015097
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcgg 82  Q
    |||||||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  31015044 acacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 18556515 - 18556455
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||||||| | ||||||||    
T  18556515 gacacagctaataatttgaaaatatcacataatttaatgtaattacaagtattggtgtcgt 18556455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 28273149 - 28273089
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||||| ||||| |||| ||||||||| |||||||| ||||||||||||||||||||||    
T  28273149 ctgacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 5927398 - 5927331
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgaca 96  Q
    |||| ||||||||||| ||||||||| |||||| |||||||||||||||||| |||||| ||| ||||    
T  5927398 acactgctaataatttgaaaaaatcatataatttaatgtaattacaagtgtcagtgtcggacatgaca 5927331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 28663626 - 28663669
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  28663626 aaaaaatcacataattctatgtaattacaagtgtcggtgtcgta 28663669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 32461520 - 32461465
Alignment:
Q  30 cacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||||||| |||||    
T  32461520 cacaactaataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgt 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 52284685 - 52284759
Alignment:
Q  11 gacacgacacggaaactgacacagctaataattt-taaaaaatcacataattcaatgtaattacaagtgtcggtg 84  Q
    ||||||||||||| ||||||||||||||||||||  ||||||  | |||||||| | ||||||||||||||||||    
T  52284685 gacacgacacggacactgacacagctaataatttaaaaaaaaaaatataattcagtataattacaagtgtcggtg 52284759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 5944283 - 5944343
Alignment:
Q  30 cacagctaataattttaaaa--aatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||| ||||  |||||||||||||| |||||||| |||||||||||||||    
T  5944283 cacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgt 5944343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 32434775 - 32434718
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    |||||| |||||||||| ||||| |||||||||||| |||||||||||||||| ||||    
T  32434775 gacacaactaataatttgaaaaagtcacataattcattgtaattacaagtgtctgtgt 32434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 41877529 - 41877464
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    ||||| ||||||||||| | ||||| |||||||| | ||||||||||||||||||||||| |||||    
T  41877529 gacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcggtgtcggacacg 41877464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 48450645 - 48450592
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcgg 82  Q
    |||||||||||||||| ||||||| |||||||| | ||||||||||||||||||    
T  48450645 acacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcgg 48450592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 5376559 - 5376499
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||||||||||| | ||||| |||||||||| |||||||| |||||||||||||||    
T  5376559 gacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgt 5376499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 6332671 - 6332730
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||| |||| ||||||||||||| ||||||||||||| ||||||||||    
T  6332671 gacacaactaataatttgaaaa-atcacataattcagtgtaattacaagtatcggtgtcgt 6332730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 40181862 - 40181942
Alignment:
Q  19 acggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    ||||| || ||||| ||||||||||| | |||||||||||||||| |||||||| | || ||||||||| |||| ||||||    
T  40181862 acggacacagacactgctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcggacacaacacgt 40181942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 2283676 - 2283727
Alignment:
Q  38 ataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    ||||||| |||||||||||| |||||||||||||| |||||| |||||||||    
T  2283676 ataatttgaaaaaatcacatgattcaatgtaattataagtgttggtgtcgta 2283727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 5898325 - 5898254
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    ||||| ||||||||| | |||||||||||||||||| |||||||| | | |||||||||  |||||||||||    
T  5898325 gacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcagacacgacacgt 5898254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 6427351 - 6427410
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||| ||||||||||| | ||||||||||||||||||||||||| | |||| ||||||||    
T  6427351 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgt 6427410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 29163420 - 29163369
Alignment:
Q  48 aaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    |||||||||||||||||| |||||| | |||||||||||| |||||||||||    
T  29163420 aaaatcacataattcaatttaattatatgtgtcggtgtcggacacgacacgt 29163369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 31694771 - 31694709
Alignment:
Q  28 gacacagctaataattttaaaaaa--tcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||| |||||||||||| ||||||  |||||||||||| | ||||||||||||||||||||||    
T  31694771 gacatagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggtgtcgt 31694709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 34371687 - 34371773
Alignment:
Q  1 tacggacacggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||| ||| |||||| ||| ||| |||||||| ||||||||||  | |||||||||||||||| |||||||| | |||||||||||||    
T  34371687 tacgaacatggacacaacatggacactgacaccgctaataattg-agaaaatcacataattcagtgtaattatatgtgtcggtgtcgt 34371773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 6427482 - 6427524
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  6427482 aaaaaatcacataattcaatgtaactacaagtgtcagtgtcgt 6427524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 18471298 - 18471355
Alignment:
Q  28 gacacagctaataattttaaaa--aatcacataattcaatgtaattacaagtgtcggt 83  Q
    ||||||||||||||||| ||||  |||||||||||||| | |||||||||||||||||    
T  18471298 gacacagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggt 18471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 35702647 - 35702581
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacga 94  Q
    ||||||||||||||||| ||||  ||| |||||| | |||||||||||||||| |||||| ||||||    
T  35702647 gacacagctaataatttgaaaacttcaaataattaagtgtaattacaagtgtcagtgtcggacacga 35702581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 36878461 - 36878519
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||| ||||||||||| | |||||||||||||||| |||||||| | |||||||||||    
T  36878461 gacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 1864939 - 1864882
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||||| ||||||||| | |||||||||||||||| |||||||| | ||||||||||    
T  1864939 gacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 23738678 - 23738735
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||||||||||||||| |||||||||||||||||| || ||||| | |||| |||||    
T  23738678 gacacagctaataatttgaaaaaatcacataattcagtgcaattaaatgtgttggtgt 23738735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 25272481 - 25272542
Alignment:
Q  27 tgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||| ||| ||||| | |||||||||||||| | |||||||| |||||||||||||||    
T  25272481 tgacacagttaacaatttgagaaaatcacataatttagtgtaattataagtgtcggtgtcgt 25272542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 26830568 - 26830641
Alignment:
Q  9 cggacacgacacggaaactgacacagctaataattttaaaa-aatcacataattcaatgtaattacaagtgtcg 81  Q
    ||||||||||||||| ||  |||||  ||||||||| |||| |||||||||||| |||||||||| ||||||||    
T  26830568 cggacacgacacggataccaacacaaataataatttaaaaaaaatcacataattaaatgtaattataagtgtcg 26830641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 40917751 - 40917809
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| ||||||||||  |||| | ||||||||||||| ||||||||||    
T  40917751 gacacagctaataatttgaaaaaatcac--aattaagtgtaattacaagtctcggtgtcgt 40917809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 398824 - 398780
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||    
T  398824 gacaccgctaataatttgaaaaaatcacataattcagtgtaatta 398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 1262884 - 1262928
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||||||||||||||| | |||||||||||||||||| ||||||    
T  1262884 gacacagctaataatttgagaaaatcacataattcaatataatta 1262928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 9103640 - 9103703
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||||| ||||||||| |||||||||||||||| | | ||| ||||||||||||||||| ||||    
T  9103640 gacacagttaataatttgaaaaaatcacataatttagtttaa-tacaagtgtcggtgtcggacac 9103703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 9629959 - 9629899
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||||||||||| | ||||||| |||||||| ||| |||| |||||||||||||||    
T  9629959 gacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgt 9629899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 9709821 - 9709885
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    |||| ||||||||||| | |||||||||||||||  |||||||| | |||||||||||| |||||    
T  9709821 acaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcggacacg 9709885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 13011275 - 13011223
Alignment:
Q  28 gacacagctaataattttaaaaaa-tcacataattcaatgtaattacaagtgt 79  Q
    ||||||||||||||||| |||||| |||||||||| | |||||||||||||||    
T  13011275 gacacagctaataatttgaaaaaaatcacataattaagtgtaattacaagtgt 13011223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 14359580 - 14359529
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtc 80  Q
    ||||||||||||||||| ||||| |||||||||| | ||||||||||||||||    
T  14359580 gacacagctaataatttgaaaaa-tcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 24334796 - 24334694
Alignment:
Q  1 tacggacacggacac--gacacggaaact--gacacagctaataattttaaaaaatca-cataattcaatgtaattacaagtgtcggtgtcgtacacgac 95  Q
    |||||||||||||||  |||||||| ||   |||||||||||| |||| ||||||    ||||||||| ||||||||||||||||||||||| ||||| |    
T  24334796 tacggacacggacaccggacacggacacaccgacacagctaatcatttgaaaaaaaatgcataattcagtgtaattacaagtgtcggtgtcggacacgtc 24334697  T
Q  96 acg 98  Q
    |||    
T  24334696 acg 24334694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 30847781 - 30847737
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaat 70  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||    
T  30847781 ctgacactgctaataatttgaaaaaatgacataattcaatgtaat 30847737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 39953205 - 39953141
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||| ||||||||||||| |||||||||||||| | |||||||  | |||||||||||| ||||    
T  39953205 gacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcggacac 39953141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 12443519 - 12443476
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaatt 71  Q
    ||||||||||||||||| | |||||||||||||||| |||||||    
T  12443519 gacacagctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 21620973 - 21621020
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    |||||||||||||||||| |||| ||||||| |||||||||| |||||    
T  21620973 aaaaaatcacataattcagtgtatttacaagcgtcggtgtcggacacg 21621020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 22781440 - 22781519
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||| ||||||||||||| ||||||| |||||| ||| |||||| | |  | ||||||| | |||||||||||||||    
T  22781440 ctgacaccgctaataattttataaaatcatataattaaatataattatatgcattggtgtcggatacgacacgtatccga 22781519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 25361867 - 25361946
Alignment:
Q  9 cggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||  | |||||  || ||||||| | |||||||||||||||| |||||||| | ||||| |||||||    
T  25361867 cggacacgacacggacgccgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgt 25361946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 30173815 - 30173761
Alignment:
Q  36 taataatttt--aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||  ||||||| |||||| ||| ||||||||||||||||||||||||    
T  30173815 taataattttgaaaaaaattacataactcagtgtaattacaagtgtcggtgtcgt 30173761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 31667433 - 31667484
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||||||||| ||||| |||||||| |||||||| ||| ||||||||||||    
T  31667433 taataattttagaaaatgacataattaaatgtaatcacatgtgtcggtgtcg 31667484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 15449272 - 15449230
Alignment:
Q  47 aaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    ||||||||||||||| | |||||||||||||||| ||||||||    
T  15449272 aaaaatcacataatttagtgtaattacaagtgtctgtgtcgta 15449230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 21366077 - 21366039
Alignment:
Q  30 cacagctaataattttaaaaaatcacataattcaatgta 68  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  21366077 cacagctaataattttaaaaaataacataattcagtgta 21366039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 23531831 - 23531793
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  23531831 gctaataatttgaaaatatcacataattcaatgtaatta 23531793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 28170393 - 28170439
Alignment:
Q  40 aattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||| |||||| ||||||||||||||||| ||||||||| |||||    
T  28170393 aattttgaaaaatgacataattcaatgtaataacaagtgtcagtgtc 28170439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 30749854 - 30749904
Alignment:
Q  42 ttttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||| |||||||||||||||| |||||||| | |||||||||||| ||||    
T  30749854 ttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 30749904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 30771305 - 30771355
Alignment:
Q  42 ttttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||| |||||||||||||||| |||||||| | |||||||||||| ||||    
T  30771305 ttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 30771355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 35919317 - 35919275
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||||| |||||||| ||||||| |||||||    
T  35919317 aaaaaatcacataattcagtgtaattataagtgtccgtgtcgt 35919275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 44482240 - 44482290
Alignment:
Q  38 ataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||| | |||||||||||||||| |||||||| | |||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgt 44482290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 48148098 - 48148036
Alignment:
Q  27 tgacacagctaataattttaaaaaa-tcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||||||||||| ||| |||||||| |||||||| |  ||||||||||||    
T  48148098 tgacaccgctaataattttaaaaaaatcatataattcagtgtaattatatatgtcggtgtcgt 48148036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 2288218 - 2288164
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||||||| | ||||||||||||||||||||||||  | |||||||||||| ||||    
T  2288218 taataatttaagaaaatcacataattcaatgtaatt--atgtgtcggtgtcggacac 2288164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 7918263 - 7918210
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||| | |||||||||||||||| |||||||| | ||||| |||||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgt 7918210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 9828051 - 9828104
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||| | |||||||||||||||| |||||||  | |||||||||||||    
T  9828051 ctaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgt 9828104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 13436458 - 13436523
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    ||||| ||||||||||| |  ||||||||||||||| |||||||| | |||| ||||||| |||||    
T  13436458 gacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcggacacg 13436523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 13997891 - 13997940
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    |||| |||| |||||||||||||||||| |||||||| | ||||||||||    
T  13997891 taattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 19637776 - 19637845
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||| | ||||| |||| |||||||||||| | | |||||||||||| |||||| || |||||||    
T  19637776 taataatttaagaaaatgacattattcaatgtaatcatatgtgtcggtgtcggacacgatacatatccga 19637845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 52903257 - 52903314
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    ||||||||| | ||||||| |||||||| |||||||| | |||||||||||| |||||    
T  52903257 taataatttaataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 52903314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 14332694 - 14332634
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgac 95  Q
    |||||||||| | |||||||||||||| | |||||||| | || ||||||||| |||||||    
T  14332694 ctaataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcggacacgac 14332634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 16164366 - 16164330
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaatta 16164330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 17008001 - 17007953
Alignment:
Q  47 aaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgac 95  Q
    |||||| |||||||||||| |||| ||||||||| |||||| |||||||    
T  17008001 aaaaattacataattcaatataatcacaagtgtcagtgtcggacacgac 17007953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 17425144 - 17425108
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||||||| | |||||||||||||||||||||||||    
T  17425144 taataatttgataaaatcacataattcaatgtaatta 17425108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 20157409 - 20157349
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||||||||| | | |||||||||||||||| |||||| | | |||||||||||||    
T  20157409 gacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgt 20157349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 26526813 - 26526758
Alignment:
Q  32 cagctaataattttaaaaaat--cacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||||||||||| ||||||   ||||||||| ||| |||||||||||||||||||    
T  26526813 cagctaataatttaaaaaaaaaacacataatttaatataattacaagtgtcggtgt 26526758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 27471619 - 27471567
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||||||| | |||| ||||||||||| |||||||||| |||| ||||||    
T  27471619 gctaataatttgagaaaagcacataattcagtgtaattacatgtgttggtgtc 27471567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 29144417 - 29144365
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtc 80  Q
    ||||||||||||||||| ||||||  | ||||| || ||||||||||||||||    
T  29144417 gacacagctaataatttgaaaaaaatagataatgcagtgtaattacaagtgtc 29144365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 25566822 - 25566901
Alignment:
Q  9 cggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| ||||| || |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  25566822 cggacatgacacagacactgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgt 25566901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 8342953 - 8343035
Alignment:
Q  9 cggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtaca 91  Q
    |||||||||||| || || |||| |||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||    
T  8342953 cggacacgacactgacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtaca 8343035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 22651976 - 22652036
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  22651976 gacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgt 22652036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 22595994 - 22596070
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccg 104  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||||||||| ||||||| || |||||||| ||||    
T  22595994 gacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggtgtcggacgcgacacgtgtccg 22596070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 4948659 - 4948718
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacga 94  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  4948659 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 4948718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 4298945 - 4298887
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  4298945 gacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtc 4298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 20873077 - 20873147
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccgat 106  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||||||||| |||||| |||| ||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgatacgtgtccgat 20873147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 5813592 - 5813669
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||||||||||| ||||| ||||||| || | ||||| ||||||||||||||||| ||||||||||| |||||    
T  5813592 gacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcggacacgacacgtgtccga 5813669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 8343316 - 8343381
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    |||| |||||||||||| |||||||||||||||| | |||||||||||||||| ||||||||||||    
T  8343316 gacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgtacacg 8343381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 18407719 - 18407788
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||||||||||  |||||||||||||||||| ||||||||||||||||| || || |||||||||    
T  18407719 gacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgtcgctgccggacacgacac 18407788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 36450813 - 36450736
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||| |||||||||| ||||||||||| |||||| ||||||||||||||| ||||||| ||||||| ||| |||||    
T  36450813 gacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggacacgacgcgtgtccga 36450736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 2572115 - 2572055
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  2572115 gacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgt 2572055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 13437023 - 13436963
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||    
T  13437023 gacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcgt 13436963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 21465412 - 21465472
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||||||||||| ||||||||    
T  21465412 gacacagctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcgt 21465472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 40332191 - 40332262
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    ||||| || |||||||| | |||||||||||||||| ||||||||||||||||||||| | |||||||||||    
T  40332191 gacactgcaaataatttgagaaaatcacataattcagtgtaattacaagtgtcggtgtgggacacgacacgt 40332262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 29447169 - 29447111
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||| |||||||||| | |||||||||||||||||||||| ||||||||||||||||    
T  29447169 gacacaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtc 29447111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 24613521 - 24613585
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    ||||||||||||||||| |||| ||||||||||| | ||||||||||||||||||||||| |||||    
T  24613521 gacacagctaataatttgaaaa-atcacataattaagtgtaattacaagtgtcggtgtcggacacg 24613585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 29510363 - 29510306
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||||||||||||||| ||||||||||| |||||| | |||||||||||||||||||    
T  29510363 gacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgt 29510306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 31514858 - 31514943
Alignment:
Q  14 acgacacggaaactgacacagctaataattttaaaa-aatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacg 98  Q
    |||||||||| ||||||||| |||||||||| |||| ||||||||||||||  |||| ||||||||| ||||| | ||||||||||    
T  31514858 acgacacggacactgacacaactaataatttgaaaaaaatcacataattcagcgtaactacaagtgttggtgttggacacgacacg 31514943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 15816188 - 15816128
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||| |||||||||||||||| | |||||||| |||||||||||||||    
T  15816188 gacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgt 15816128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 30077442 - 30077387
Alignment:
Q  32 cagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||||| ||||||    
T  30077442 cagctaataatttgaaaacatcacataattcagtgtaattacaagtgtccgtgtcg 30077387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 31236636 - 31236570
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacga 94  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||| | ||||||||| || ||||||    
T  31236636 gacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgacggacacga 31236570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 41831999 - 41831917
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtc-----ggtgtcgtacacgacacgtatccga 105  Q
    ||||||| ||||||||| |||||||||||||||||| ||||| ||||||||||     ||||||| |||||| ||||||||||    
T  41831999 gacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtcgtgttggtgtcggacacgatacgtatccga 41831917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 3025557 - 3025622
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    ||||||||||| | |||||||||||||||| |||||||| | ||||| |||||| |||||||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacacgacacgt 3025622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 22197800 - 22197743
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||||||||||||| ||||| |||||||||| | |||||||||||||||| |||||    
T  22197800 acacagctaataatttgaaaaattcacataatttagtgtaattacaagtgtcagtgtc 22197743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 31556997 - 31557065
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||| ||||||||| |||| ||||||||||||| ||||||||||||| ||||||||  |||||||||    
T  31556997 gacacagttaataatttgaaaa-atcacataattcagtgtaattacaagtttcggtgtcagacacgacac 31557065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 28745498 - 28745558
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||||||||||| ||||| |||||||||||||||||| ||||| ||||| ||||||    
T  28745498 gacactgctaataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtcgt 28745558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 30271350 - 30271290
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||| |||| ||||||||||||||| || |||||||||||||| | |||||||    
T  30271350 gacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtgccagtgtcgt 30271290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 44694790 - 44694842
Alignment:
Q  27 tgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgt 79  Q
    ||||||||| ||||||||||||||||||||||||| |  ||||||||||||||    
T  44694790 tgacacagcaaataattttaaaaaatcacataattaagcgtaattacaagtgt 44694842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 18170529 - 18170482
Alignment:
Q  40 aattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||| ||||||| |||||||||||||||||||||| |||||||||||    
T  18170529 aatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcg 18170482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 18634097 - 18634050
Alignment:
Q  40 aattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||| ||||||| |||||||||||||||||||||| |||||||||||    
T  18634097 aatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcg 18634050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 41838182 - 41838131
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgt 79  Q
    ||||||||||||||||| |||||||||||||||||| || || |||||||||    
T  41838182 gacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgt 41838131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 3677794 - 3677856
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacg 98  Q
    ||||||||||||||||||||||||||| ||||||||| | || ||||||| | |||| |||||    
T  3677794 taataattttaaaaaatcacataattctatgtaattatatgtatcggtgttggacacaacacg 3677856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 12606888 - 12606830
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||| ||||||||||| | ||||||| ||||||||||||||||| | |||||||||||    
T  12606888 gacactgctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtc 12606830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 14134706 - 14134775
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccg 104  Q
    |||||||||| | |||||||||||||||| |||||||| |  ||||||||||  ||||||||||| ||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtcaaacacgacacgtgtccg 14134775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 24669431 - 24669492
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||||| | ||||||||| |  |||| |||||||||| |||||||||||||||||||||||    
T  24669431 ctgacaccgttaataatttgaggaaattacataattcagtgtaattacaagtgtcggtgtcg 24669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 4786389 - 4786329
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgaca 96  Q
    ||||||||| | |||||||||||||||| |||||||| | |||||||||||| | ||||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcggatacgaca 4786329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 7442846 - 7442902
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    |||| ||||||||||| | ||||| |||||||||| ||||||||||||||| |||||    
T  7442846 acaccgctaataatttcataaaattacataattcagtgtaattacaagtgttggtgt 7442902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 11927137 - 11927085
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||| | |||||||||||||||| |||||||| | |||||||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgt 11927085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 13844655 - 13844591
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||| ||||||||||| | |||||||||||||| | |||||||| | |||||||||||| ||||    
T  13844655 gacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 25192406 - 25192350
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtg 84  Q
    ||||||||||||||||| ||||| | |||||||||| | |||||| |||||||||||    
T  25192406 gacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcggtg 25192350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 34897085 - 34897149
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||| ||||||||||| | |||||||||||||||| |||||||| | |||||| ||||| ||||    
T  34897085 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcggacac 34897149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 18964191 - 18964234
Alignment:
Q  42 ttttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||| ||||||||||||||||||||||||| | ||||||||||    
T  18964191 ttttagaaaatcacataattcaatgtaattatatgtgtcggtgt 18964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 20679447 - 20679396
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||||||| | ||||||||||| |||| |||||||| |||||||||||||    
T  20679447 ctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 105
Target Start/End: Complemental strand, 926840 - 926770
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||||||| | |||||| |||  |||| |||||||| |||||||||||||| || |||||||| |||||    
T  926840 ctaataatttgagaaaatctcattgttcagtgtaattataagtgtcggtgtcggacgcgacacgtgtccga 926770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 4673484 - 4673426
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||| ||||||||| ||||||||| | |||||| ||||||||||||| || |||||    
T  4673484 gacacagataataatttgaaaaaatcataaaattcagtgtaattacaagtatcagtgtc 4673426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 15023288 - 15023238
Alignment:
Q  56 ataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccgat 106  Q
    |||||||| ||||||||||||||||| ||||| | ||||||||| ||||||    
T  15023288 ataattcagtgtaattacaagtgtcgatgtcggatacgacacgtgtccgat 15023238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 25172759 - 25172697
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||| ||||||||||| | ||||| ||||| || |||||||||| | |||||||||||||    
T  25172759 ctgacactgctaataatttgataaaattacatattttaatgtaattatatgtgtcggtgtcgt 25172697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 26434187 - 26434237
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    |||||| ||| | |||||||||||||||||| |||||| ||||||||||||    
T  26434187 ctaatagtttgagaaaatcacataattcaatataattaaaagtgtcggtgt 26434237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 27213547 - 27213601
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcgg 82  Q
    ||||| ||||||||||| | |||||||||||||||| |||||||| | |||||||    
T  27213547 gacactgctaataatttcagaaaatcacataattcactgtaattatatgtgtcgg 27213601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 29519203 - 29519237
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaat 70  Q
    ||||||||||||||||||| |||||||||||||||    
T  29519203 taataattttaaaaaatcatataattcaatgtaat 29519237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 9414926 - 9414857
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||  ||| |||||||||||||| || ||||| |||||| ||||||  ||||||||||| |||||    
T  9414926 taataattaaaaataatcacataattcagtgcaattataagtgttggtgtcagacacgacacgtgtccga 9414857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 26902214 - 26902173
Alignment:
Q  48 aaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    |||||||||||||||| |||||||| | ||||||||||||||    
T  26902214 aaaatcacataattcagtgtaattatatgtgtcggtgtcgta 26902173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 33405435 - 33405374
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||| | |||| ||||||||| | |||||||| | |||||||||||| |||||||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgtcggacacgacac 33405374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 44505184 - 44505135
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||||||||| ||||| | |||||| |||||||||| ||||||||||||    
T  44505184 taataattttacaaaataatataatttaatgtaattataagtgtcggtgt 44505135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 11803256 - 11803316
Alignment:
Q  25 actgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    |||||||| | ||||||||| | |||||||||||||||| |||||||| | |||| |||||    
T  11803256 actgacactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgt 11803316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 11944673 - 11944725
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||| | |||||||||||| ||| |||||||| | |||||||||||||    
T  11944673 taataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgt 11944725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 12985400 - 12985456
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||||||| | ||||||||||||||||||||||| | |  ||||||||||| ||||    
T  12985400 taataatttgagaaaatcacataattcaatgtaatcatatatgtcggtgtcggacac 12985456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 17468567 - 17468507
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| | ||||||||  |||||||||||||| |  ||||||||||||||| ||||||||    
T  17468567 gacacaacaaataatttgtaaaaatcacataatgcggtgtaattacaagtgttggtgtcgt 17468507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 22493504 - 22493536
Alignment:
Q  38 ataattttaaaaaatcacataattcaatgtaat 70  Q
    |||||||||||||||||||||||||| ||||||    
T  22493504 ataattttaaaaaatcacataattcagtgtaat 22493536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 35519865 - 35519833
Alignment:
Q  29 acacagctaataattttaaaaaatcacataatt 61  Q
    |||||||||||||||| ||||||||||||||||    
T  35519865 acacagctaataatttgaaaaaatcacataatt 35519833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 36934670 - 36934714
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||| ||||||||||  |||||||||||||||||| ||||||||    
T  36934670 gacaccgctaataattcgaaaaaatcacataattcattgtaatta 36934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 9778481 - 9778560
Alignment:
Q  9 cggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  9778481 cggacacgacacggacactgacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgt 9778560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 19213791 - 19213870
Alignment:
Q  16 gacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgac 95  Q
    |||||||| |||||||| ||||||||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||    
T  19213791 gacacggacactgacactgctaataattttaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcggacacgac 19213870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 24339642 - 24339702
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  24339642 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgt 24339702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 26033532 - 26033460
Alignment:
Q  16 gacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||| |||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||    
T  26033532 gacacggacactgacgcagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgt 26033460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 7438706 - 7438764
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7438706 gacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 25481902 - 25481968
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacga 94  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  25481902 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacacga 25481968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 7197356 - 7197287
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| |||| ||||    
T  7197356 gacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtcggacacaacac 7197287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 5409897 - 5409835
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||| |||||||||||||| |||||||||||||||||| || |||||||||||||||||||||    
T  5409897 ctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgt 5409835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 15680809 - 15680886
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||| |||||||||||  |||||||||||||||| | |||||||| |||||||||||||| ||||||||||| |||||    
T  15680809 gacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgacacgtgtccga 15680886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 3991324 - 3991384
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  3991324 gacacaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgt 3991384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 13770691 - 13770751
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||||||||||| ||||||    
T  13770691 gacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgt 13770751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 21880158 - 21880221
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||||| | ||||| |||||||||| ||||||||||||||||||||||| |||||||||    
T  21880158 gctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggacacgacac 21880221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 11061135 - 11061077
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||||||||||||| |||||||||||||||| | | ||||||||||||||||||||    
T  11061135 gacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtc 11061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 11700777 - 11700847
Alignment:
Q  2 acggacacggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||| ||||||||||||||||  ||||||| | ||||||||| | |||||||||||||||||||||||||    
T  11700777 acggatacggacacgacacggacgctgacaccgttaataatttgacaaaatcacataattcaatgtaatta 11700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 13300394 - 13300468
Alignment:
Q  12 acacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||||||||| ||||||| | |||||||||| ||||||||| |||||||| ||||||||| ||| ||||||||    
T  13300394 acacgacacggatactgacataactaataatttgaaaaaatcatataattcagtgtaattaccagtctcggtgtc 13300468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 9408385 - 9408332
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    ||||||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  9408385 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgta 9408332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 19992001 - 19992062
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    ||||||||||||||||| | ||||||||||| |||| |||||||| ||||||||||||||||    
T  19992001 gacacagctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgta 19992062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 18215241 - 18215185
Alignment:
Q  32 cagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||| ||||||||||||||| || |||| |||||||||||||||||||    
T  18215241 cagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgt 18215185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 21864806 - 21864885
Alignment:
Q  28 gacacagctaataattttaaaaaa--tcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||||||||||| ||||||  ||| |||||| | ||||||||||||||||| ||||| ||||||||||| |||||    
T  21864806 gacacagctaataatttgaaaaaaaatcatataatttagtgtaattacaagtgtcgctgtcggacacgacacgtgtccga 21864885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 35861964 - 35862024
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||| ||||||||||||||||||||||||||  ||||||| |||||||    
T  35861964 gacacaactaataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtcgt 35862024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 43027524 - 43027468
Alignment:
Q  32 cagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||| ||||||||||||||| || ||||| ||||||||||||||||||    
T  43027524 cagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgt 43027468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 21560521 - 21560564
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  21560521 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgta 21560564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 18039017 - 18039059
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  18039017 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgt 18039059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 598208 - 598285
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||| ||||||||||| | |||||||| ||||| |||||||||  |||||||||||||  ||||||||||| |||||    
T  598208 gacaccgctaataatttaagaaaatcacgtaattaaatgtaattgtaagtgtcggtgtcagacacgacacgtgtccga 598285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 27945048 - 27945101
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||| | ||||| |||||||||| ||||||||||||||||||||||||    
T  27945048 ctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgt 27945101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 7058414 - 7058486
Alignment:
Q  16 gacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| | ||||| ||| |||||||||| |||||||||  ||||||| ||||||||||||||| ||||||||    
T  7058414 gacacgaacactgatacaactaataatttgaaaaaatcatgtaattcagtgtaattacaagtgttggtgtcgt 7058486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 11665501 - 11665441
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||||| |||||||||| |||||||||||||||||| | |||||| |||||||| ||||    
T  11665501 ctgacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtc 11665441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 24146822 - 24146874
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||||||||| |||||||||||||||||| |||||| | |||||||||||    
T  24146822 gctaataattttagaaaatcacataattcaatataattatatgtgtcggtgtc 24146874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 28155570 - 28155634
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||| ||||||||||| | ||||| |||||||||  ||||||||||||||||||||||| ||||    
T  28155570 gacaccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcggacac 28155634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 32094079 - 32094019
Alignment:
Q  29 acacagctaataattttaaaaaa-tcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| |||||||||| |||||| |||||||||||| ||||||||||| ||||||||||||    
T  32094079 acacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgt 32094019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 48438564 - 48438604
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  48438564 aaaaaatcacataattcaatgtaattacacgtgtcggtgtc 48438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 1656657 - 1656720
Alignment:
Q  9 cggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||||||||||||| || |||||| ||||   |||||||||||||||||||||| ||||||||    
T  1656657 cggacacgacacggacaccgacacaactaaattttttaaaaaatcacataattcagtgtaatta 1656720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 11272647 - 11272585
Alignment:
Q  28 gacacagctaataattttaaaaaatcacata--attcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| || ||||||| |||||||||||||  ||||| ||||||||||||||||||||||||    
T  11272647 gacacaactgataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgt 11272585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 24105678 - 24105737
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||||||||||||||| |||||||  ||| ||||| |||||||||||||||||| ||||    
T  24105678 gacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcggagtcg 24105737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 26733304 - 26733371
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgac 95  Q
    ||||| ||||||||||| | |||||||||||||||| | |||||| | |||||||||||| |||||||    
T  26733304 gacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcggacacgac 26733371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 42720950 - 42720891
Alignment:
Q  27 tgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||| | ||||| |||||    
T  42720950 tgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcagtgtc 42720891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 1885591 - 1885633
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||| ||||||||||||||||| |||||||||||||||||    
T  1885591 aaaaaatgacataattcaatgtaatcacaagtgtcggtgtcgt 1885633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 2334268 - 2334310
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  2334268 aaaaaatcacataatttagtgtaattacaagtgtcggtgtcgt 2334310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 25956465 - 25956511
Alignment:
Q  48 aaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacga 94  Q
    ||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  25956465 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 25956511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 20549791 - 20549860
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||| ||||||||||| | |||||||| ||||||| |||||||| | |||||||||||| |||| ||||    
T  20549791 gacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacacaacac 20549860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 25822655 - 25822716
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    |||||| |||||||||| ||||||   || |||||| |||||||||||||||||||||||||    
T  25822655 gacacaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtgtcggtgtcgta 25822716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 4024008 - 4024088
Alignment:
Q  9 cggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    |||||||||||  || || |||||| |||||||||| ||||||| |||||||| ||| |||||| |||| |||| ||||||    
T  4024008 cggacacgacatagacaccgacacaactaataatttaaaaaaatgacataatttaatataattataagtatcggcgtcgta 4024088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 6028633 - 6028685
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||| |||| || |||||||| ||||||||||||| ||||||||||||    
T  6028633 taataatttgaaaatataacataatttaatgtaattacaaatgtcggtgtcgt 6028685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 2424596 - 2424658
Alignment:
Q  9 cggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    |||||||||||| || ||| |||| ||||||||||| | |||||||||||||||| ||||||||    
T  2424596 cggacacgacacagacactaacac-gctaataatttgagaaaatcacataattcagtgtaatta 2424658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 3938152 - 3938187
Alignment:
Q  37 aataattttaaaaaatcacataattcaatgtaatta 72  Q
    |||||||| |||||||||||||||||||||||||||    
T  3938152 aataatttaaaaaaatcacataattcaatgtaatta 3938187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 12843225 - 12843174
Alignment:
Q  37 aataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||| | ||||| ||||||||||||||||||||| ||||| |||||||    
T  12843225 aataatttgataaaattacataattcaatgtaattacatgtgtcagtgtcgt 12843174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 17851437 - 17851488
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||||||||||| |||||||||||||||| |||||||| | ||||| ||||    
T  17851437 gctaataattttagaaaatcacataattcagtgtaattatatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 23746892 - 23746947
Alignment:
Q  10 ggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaat 65  Q
    |||||||||||| | ||||||||| || ||||||| | ||||||||||||||||||    
T  23746892 ggacacgacacgaacactgacacaacttataatttgagaaaatcacataattcaat 23746947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 27980805 - 27980840
Alignment:
Q  37 aataattttaaaaaatcacataattcaatgtaatta 72  Q
    |||||||||||||||| |||||||||||||||||||    
T  27980805 aataattttaaaaaatgacataattcaatgtaatta 27980840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 1401031 - 1401093
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgaca 96  Q
    ||||||||||| | ||| |||||||||||| |||||||| |||| ||||||||  ||||||||    
T  1401031 gctaataatttgagaaactcacataattcagtgtaattataagtatcggtgtccgacacgaca 1401093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 19206050 - 19206108
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||| ||||||||||| | |||||||||||||||| | |||||| | |||||||||||    
T  19206050 gacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtc 19206108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 33994223 - 33994281
Alignment:
Q  39 taattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    |||||| ||||  |||||||||||| || |||||||||||||||||||  |||||||||    
T  33994223 taatttgaaaaggtcacataattcagtgcaattacaagtgtcggtgtcagacacgacac 33994281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 38143231 - 38143281
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||||| |||||||||||||||| |||||||||| | |||| ||||||    
T  38143231 taataatttgaaaaaatcacataatttaatgtaattatatgtgttggtgtc 38143281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 41020496 - 41020570
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatc 102  Q
    |||||| ||||||||||  ||||||||||||||| | |||||||| | | |||||||| | ||||||||| ||||    
T  41020496 gacacaactaataatttacaaaaatcacataatttagtgtaattatatgcgtcggtgttgaacacgacacatatc 41020570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 11831432 - 11831481
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagt 77  Q
    |||||| |||||||||| ||||||||| |||||| | |||||||||||||    
T  11831432 gacacaactaataatttgaaaaaatcatataatttagtgtaattacaagt 11831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 18213078 - 18213025
Alignment:
Q  42 ttttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgac 95  Q
    ||||| |||||||||||||| | |||||||| | |||||||||||| |||||||    
T  18213078 ttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcggacacgac 18213025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 640127 - 640171
Alignment:
Q  42 ttttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||| ||||||||||||||| |||||||| | |||||||||||    
T  640127 ttttaacaaatcacataattcagtgtaattatatgtgtcggtgtc 640171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 3554555 - 3554491
Alignment:
Q  38 ataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatc 102  Q
    ||||||| | ||||| |||||||| |||||||||| |  ||||||||||| ||||||||| ||||    
T  3554555 ataatttaagaaaattacataatttaatgtaattatagatgtcggtgtcggacacgacacatatc 3554491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 13557782 - 13557750
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtg 78  Q
    |||||||||||||||||| ||||||||||||||    
T  13557782 aaaaaatcacataattcagtgtaattacaagtg 13557750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 17258030 - 17257990
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||| ||||||||||||||||| | |||||||||||||    
T  17258030 aaaaaataacataattcaatgtaatcataagtgtcggtgtc 17257990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 21930633 - 21930688
Alignment:
Q  32 cagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||| ||||||| | |||||||| | ||||||||||||||| ||||||    
T  21930633 cagctaataattt-aaaaaattagataattcattttaattacaagtgtcgatgtcgt 21930688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 22602749 - 22602709
Alignment:
Q  48 aaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||| |||||||| | |||||||||||||    
T  22602749 aaaatcacataattcagtgtaattatatgtgtcggtgtcgt 22602709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 29787428 - 29787384
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||| ||||||||||| | |||||||||||||||| ||||||||    
T  29787428 gacaccgctaataatttgagaaaatcacataattcagtgtaatta 29787384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 32308120 - 32308180
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||||||||||| | |||||||||||||||| |||||||  | ||||| |||||||    
T  32308120 gacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgt 32308180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 39138458 - 39138510
Alignment:
Q  42 ttttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacga 94  Q
    ||||| |||||||||||||||| |||||||| |  ||||||||||| ||||||    
T  39138458 ttttagaaaatcacataattcagtgtaattatatatgtcggtgtcggacacga 39138510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 40287415 - 40287352
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    |||||| | |||||||| ||||||||| ||| |||| ||||||||||||||||||| ||| ||||    
T  40287415 gacacaacgaataatttgaaaaaatcatata-ttcagtgtaattacaagtgtcggtatcggacac 40287352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 2438780 - 2438709
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  2438780 ctgacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacac 2438709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 37558977 - 37559054
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||  ||||||| |||||    
T  37558977 gacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacttgacacgtgtccga 37559054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 5040735 - 5040811
Alignment:
Q  31 acagctaataattttaaaa--aatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  5040735 acagctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacacgacatgtgtccga 5040811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 18256042 - 18255974
Alignment:
Q  25 actgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    |||||||||| ||||||||| |||||||||||||||| |||||||||| |||||||||||||| |||||    
T  18256042 actgacacagataataatttaaaaaaatcacataatttaatgtaattagaagtgtcggtgtcggacacg 18255974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 15972881 - 15972950
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||| ||||||| ||| |||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  15972881 taataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccga 15972950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 30404901 - 30404840
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  30404901 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggcgtcggacacgacac 30404840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 30717594 - 30717529
Alignment:
Q  23 aaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||| |||| |||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||    
T  30717594 aaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgt 30717529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 38117218 - 38117141
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||||||||||| ||||||||||||| |||  ||||||||||||||| ||||||| |||| |||||| |||||    
T  38117218 gacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgttggtgtcggacacaacacgtgtccga 38117141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 44860303 - 44860380
Alignment:
Q  11 gacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||| |||||||| ||||||||||| | |||||| ||||||||| |||||||| | |||||||||||||    
T  44860303 gacacgacacggacactgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgt 44860380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 11223924 - 11223864
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||||||||||| ||| ||||||| |||||||||| ||||||||||||||||||||||    
T  11223924 ctgacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 20539733 - 20539673
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||    
T  20539733 gacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcgt 20539673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 6940255 - 6940326
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    ||||||||||||||||||||||| | |||||||| | ||||||||||||||||||| ||  |||||||||||    
T  6940255 gacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggtatccgacacgacacgt 6940326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 18841074 - 18841003
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    |||||||| |||||||||| ||||||| |||||||| | ||||||||||||||||||||||  |||||||||    
T  18841074 ctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtcagacacgacac 18841003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 19536457 - 19536391
Alignment:
Q  28 gacacagctaataattttaaaaaa-tcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    |||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |||||    
T  19536457 gacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 19536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 21624266 - 21624332
Alignment:
Q  28 gacacagctaataattttaaaaaatca-cataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    ||||||||||||||||||||||||  | ||||||||| ||||||||||||||||||||||| |||||    
T  21624266 gacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtgtcggacacg 21624332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 974747 - 974807
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||| |||| ||||||| ||||| ||||||||||||||||||||||||    
T  974747 gacacaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtcgt 974807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 18421971 - 18422027
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  18421971 taataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtcgaacac 18422027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 21374758 - 21374706
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtc 80  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  21374758 gacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 12224241 - 12224300
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||||| |||||| |||||||||||||||||||||||||| |||||| |||| |||||    
T  12224241 aaaaaatcccataatccaatgtaattacaagtgtcggtgtcggacacgatacgtgtccga 12224300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 5367199 - 5367269
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||||||| |  ||||||||||||||| |||||||| | |||||||||||| ||||||||| |||||||    
T  5367199 ctaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatatccga 5367269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 12668475 - 12668422
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||| ||||||| |||||||||| |||||||| |||||||||||||||    
T  12668475 ctaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgt 12668422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 15657871 - 15657924
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||  ||||||||||||||||| ||||||||||| ||||||||||||    
T  15657871 ctaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcgt 15657924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 20473322 - 20473387
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    |||||| |||||||||| ||||| ||| |||||||| ||||||||||||||||| ||||| |||||    
T  20473322 gacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtcggacacg 20473387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 33153431 - 33153484
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||| |||||||    
T  33153431 ctaatgatttaaaaaaatcacataattcagtgtaattacaagtgtccgtgtcgt 33153484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 38442309 - 38442366
Alignment:
Q  30 cacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    |||| ||||| |||| |||||||||||||||||||| |||||| ||||||||||||||    
T  38442309 cacaactaatgatttaaaaaaatcacataattcaatataattataagtgtcggtgtcg 38442366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 18420492 - 18420436
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    |||| ||||||||||| | ||||||||||||||||||| ||||| ||||||||||||    
T  18420492 acactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgt 18420436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 24894389 - 24894449
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||||||||||||||||| || ||||| |||||| ||| ||||    
T  24894389 gacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgttggtttcgt 24894449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 36756403 - 36756343
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||| || |||| |||||||||| |||||||| |||||||||||||||    
T  36756403 gacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgt 36756343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 14996283 - 14996224
Alignment:
Q  28 gacacagctaataattttaaaaaa-tcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||||||||||||| |||||| ||| |||||| | ||||||||||||||||||||||    
T  14996283 gacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 14996224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 20242786 - 20242715
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    |||||| |||||  ||||| |||||||||||||||| |||||||| | |||||||||||| |||| ||||||    
T  20242786 gacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaacacgt 20242715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 28596487 - 28596546
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||| ||||||||| ||| |||||||| |||||||||||||| ||||||||||| |||||    
T  28596487 aaaacatcacataagtcagtgtaattataagtgtcggtgtcggacacgacacgtgtccga 28596546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 30335417 - 30335476
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    |||||| |||||||||| ||||||| |||||||| | ||||||||||| |||||||||||    
T  30335417 gacacaactaataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtgtcg 30335476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 37419752 - 37419803
Alignment:
Q  37 aataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||| ||||||||||| |||||| |||||||||||||| |||||||||    
T  37419752 aataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgt 37419803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 43586044 - 43585993
Alignment:
Q  48 aaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    ||||| ||||||||||||||||| |||||||||||||||| |||||| ||||    
T  43586044 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgt 43585993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 12940995 - 12940941
Alignment:
Q  27 tgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcg 81  Q
    ||||||| |||||||||| ||||||||| |||||||| ||||||||||| |||||    
T  12940995 tgacacaactaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 23058483 - 23058441
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  23058483 aaaaaatcacataatccagtgtaattacaagtgtcggtgtcgt 23058441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 34221556 - 34221502
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcgg 82  Q
    ||||||||||||||||| ||||||  ||||||||| ||| |||||||||||||||    
T  34221556 gacacagctaataatttgaaaaaaatacataattctatgcaattacaagtgtcgg 34221502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 31808077 - 31808146
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||| ||||||||||| | |||||||||||||||| |||||||| | ||||| |||| | |||||||||    
T  31808077 gacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtcagtgttgaacacgacac 31808146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 37411303 - 37411226
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||| ||||||||||| | |||||||||||||||| ||| |||| | |||||| ||||| ||||||| ||| |||||    
T  37411303 gacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtcgaacacgacgcgtgtccga 37411226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 44605190 - 44605141
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||||||| | ||||| ||||||||||||||||||||| ||||||||||    
T  44605190 taataatttgagaaaataacataattcaatgtaattacatgtgtcggtgt 44605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 18631485 - 18631421
Alignment:
Q  9 cggacacgacacggaaactgacacagctaataattttaaaaaa-tcacataattcaatgtaatta 72  Q
    ||||||||||||||| ||| ||||  |||||||||| |||||| |||||| ||||||||||||||    
T  18631485 cggacacgacacggacactaacacctctaataatttgaaaaaaatcacatcattcaatgtaatta 18631421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 28677909 - 28677953
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||    
T  28677909 gacaccgctaataatttgaaaaaatcacataattcagtgtaatta 28677953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 39323264 - 39323316
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtc 80  Q
    ||||| ||||||||||| | ||||| |||||||||| ||||||||||||||||    
T  39323264 gacaccgctaataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 34691858 - 34691799
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    ||||||||||| | ||||||| |||||||| |||||||| | |||||||||||| |||||    
T  34691858 gctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 34691799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 34714270 - 34714211
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    ||||||||||| | ||||||| |||||||| |||||||| | |||||||||||| |||||    
T  34714270 gctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 34714211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 4882749 - 4882695
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||| ||||||| | |||||||| ||||||||||||||||| ||||||    
T  4882749 gctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcgt 4882695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 21091723 - 21091781
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||| ||||||||||| | ||||| ||||| |||| |||||||||||||||| |||||    
T  21091723 gacaccgctaataatttaagaaaataacatacttcagtgtaattacaagtgtcagtgtc 21091781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 42832335 - 42832277
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||| ||||||||||| | ||||| ||||| |||| |||||||| |||||||||||||    
T  42832335 gacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 14450834 - 14450797
Alignment:
Q  48 aaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  14450834 aaaatcacataattcaatgtaatcacaagtgtcagtgt 14450797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 18570980 - 18571049
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||| | ||||| ||||||||||||||||| | | ||||| |||||| |||||| || |||||||    
T  18570980 taataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcgaacacgatacatatccga 18571049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 18622613 - 18622666
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||| | |||||||||||||||| |||||||| | |||| ||||||||    
T  18622613 ctaataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgt 18622666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 29176552 - 29176495
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||||| ||||||||| ||||  |||||||||||| |||||||| |||||| |||||    
T  29176552 gacacagttaataatttgaaaaggtcacataattcagtgtaattataagtgttggtgt 29176495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 87
Target Start/End: Original strand, 44635520 - 44635557
Alignment:
Q  50 aatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  44635520 aatcacgtaattcagtgtaattacaagtgtcggtgtcg 44635557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 1886936 - 1886892
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattac 73  Q
    |||||| ||||||||| ||||| | ||||||||||||||||||||    
T  1886936 acacagttaataatttgaaaaatttacataattcaatgtaattac 1886892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 21616762 - 21616806
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||| ||||||||||| | |||||||||||||||| ||||||||    
T  21616762 gacaccgctaataatttgagaaaatcacataattcagtgtaatta 21616806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 21782877 - 21782833
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||| ||||||||||| | |||||||||||||||| ||||||||    
T  21782877 gacactgctaataatttgagaaaatcacataattcagtgtaatta 21782833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 23718026 - 23718082
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtg 84  Q
    ||||| ||||||||||| | ||| |||||||||||| |||||||| | |||||||||    
T  23718026 gacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 24105698 - 24105754
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtg 84  Q
    ||||| ||||||||||| | ||| |||||||||||| |||||||| | |||||||||    
T  24105698 gacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 29367421 - 29367381
Alignment:
Q  36 taataattttaaaaaa-tcacataattcaatgtaattacaa 75  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  29367421 taataattttaaaaaaatcacataattcagtgtaattacaa 29367381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 31018591 - 31018655
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    |||| ||||||||||| | |||||||||| ||| | |||||||| | |||||||||||| |||||    
T  31018591 acaccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcggtgtcggacacg 31018655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 33884071 - 33884115
Alignment:
Q  48 aaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||| |||| ||||| ||||||||||||||||||||||| ||||    
T  33884071 aaaatgacatgattcagtgtaattacaagtgtcggtgtcgaacac 33884115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 34785041 - 34784981
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||  ||||| |||||||||||||| | |||||||| | |||||||||||||    
T  34785041 gacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgt 34784981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 7e-25; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 54580094 - 54579996
Alignment:
Q  16 gacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccgatcttcatag 114  Q
    ||||||||  |||||||| |||||||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||  ||||||||    
T  54580094 gacacggacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgtgcttcatag 54579996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 23293045 - 23292968
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||| ||||||||||| |||||    
T  23293045 gacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccga 23292968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 12895198 - 12895115
Alignment:
Q  1 tacggacacggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||||||||    | || |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  12895198 tacggacacggacacgacacg----ccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgt 12895115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 28964308 - 28964230
Alignment:
Q  27 tgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||| |||||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||    
T  28964308 tgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcggacacgacacatatccga 28964230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 31800537 - 31800469
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgaca 96  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||||||||||||| ||||||||||||    
T  31800537 gacacagctaataattttaaaaaattaaataatttaatgtaattacaagtgtcggtatcgtacacgaca 31800469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 21945503 - 21945572
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||| |||||    
T  21945503 gacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacatgacac 21945572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 29205432 - 29205513
Alignment:
Q  16 gacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    |||||||| ||  |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  29205432 gacacggacaccaacacggctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgttggacacgacac 29205513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 49431025 - 49431097
Alignment:
Q  28 gacacagctaataattttaaaa-aatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||| |||||||||||    
T  49431025 gacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcggacacgacacgt 49431097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 4157133 - 4157218
Alignment:
Q  11 gacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    |||||||||| || ||||||||| |||||||||| |||| ||||||||||| | || |||||||||||||||||||| |||||||||    
T  4157133 gacacgacacagacactgacacaactaataatttgaaaa-atcacataatttagtgcaattacaagtgtcggtgtcggacacgacac 4157218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 38847071 - 38846994
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||||||||||| ||||||||| || ||||| |||||||||||||||| |||||| | ||||||||| |||||    
T  38847071 gacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtcagtgtcggatacgacacgtgtccga 38846994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 3947825 - 3947765
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||||||    
T  3947825 gacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgt 3947765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 2362034 - 2361967
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgac 95  Q
    ||||||||||||||||| ||||||| |||||||| | |||||||| |||||||||||||| |||||||    
T  2362034 gacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcggacacgac 2361967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 11596406 - 11596351
Alignment:
Q  33 agctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  11596406 agctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgt 11596351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 24613760 - 24613702
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||| |||||||||| | |||||||||||||||||||||| ||||||||||||||||    
T  24613760 gacacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtc 24613702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 715667 - 715595
Alignment:
Q  28 gacacagctaataattttaaaaaa-tcacataattcaatgtaattacaagtgtcggtgtc--gtacacgacac 97  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||||  |||||||||||    
T  715667 gacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacac 715595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 752993 - 752921
Alignment:
Q  28 gacacagctaataattttaaaaaa-tcacataattcaatgtaattacaagtgtcggtgtc--gtacacgacac 97  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||||  |||||||||||    
T  752993 gacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacac 752921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 12895325 - 12895256
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||| ||||||||||||||||   |||||||| |||||||||||||| |||||||| ||||||||    
T  12895325 taataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtcggacacgacatgtatccga 12895256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 28084521 - 28084582
Alignment:
Q  28 gacacagctaataattttaaaa-aatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  28084521 gacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtctgtgtcgt 28084582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 30298946 - 30299007
Alignment:
Q  28 gacacagctaataattttaaaaaa-tcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||||| | |||||||||| ||||||||||||||||||||||||    
T  30298946 gacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgt 30299007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 30327814 - 30327875
Alignment:
Q  28 gacacagctaataattttaaaaaa-tcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||||| | |||||||||| ||||||||||||||||||||||||    
T  30327814 gacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgt 30327875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 8423777 - 8423709
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgaca 96  Q
    ||||| ||||||||||| | |||||||||||||||| |||||||| || ||||||||||| ||||||||    
T  8423777 gacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcggacacgaca 8423709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 12797378 - 12797331
Alignment:
Q  47 aaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacga 94  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  12797378 aaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 12797331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 42640547 - 42640594
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||    
T  42640547 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 42640594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 6485662 - 6485613
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 14465133 - 14465088
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattaca 74  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||    
T  14465133 acacacctaataatttgaaaaaatcacataattcaatgtaattaca 14465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 18844548 - 18844491
Alignment:
Q  12 acacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaa 69  Q
    |||| ||||||||||||||||||  |||||||| |||||||||||||| |||||||||    
T  18844548 acacaacacggaaactgacacagaaaataatttgaaaaaatcacataactcaatgtaa 18844491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 34306862 - 34306786
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||| |||||||||| ||||| ||| |||||  | ||||||||||||||||||||||| ||||||||||| |||||    
T  34306862 gacacaactaataatttgaaaaa-tcagataatgtagtgtaattacaagtgtcggtgtcggacacgacacgtgtccga 34306786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 19482668 - 19482728
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||| |||| ||||||||||||  ||||||||||||||| ||||||||    
T  19482668 gacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcgt 19482728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 51701258 - 51701318
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| ||||||| |||||||| | |||||||||||||||  |||||||    
T  51701258 gacacagctaataatttgaaaaaattacataattgagtgtaattacaagtgttagtgtcgt 51701318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 11651193 - 11651142
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgt 79  Q
    ||||||||||||||||| |||||||||||||||||| || || |||||||||    
T  11651193 gacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgt 11651142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 13307897 - 13307948
Alignment:
Q  48 aaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    ||||| ||||||||||||||||| |||||||| ||||||| |||||||||||    
T  13307897 aaaatgacataattcaatgtaatcacaagtgttggtgtcggacacgacacgt 13307948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 16073413 - 16073460
Alignment:
Q  47 aaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacga 94  Q
    ||||||| ||||||||| ||||||||||||||||||||||| ||||||    
T  16073413 aaaaatcgcataattcagtgtaattacaagtgtcggtgtcggacacga 16073460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 28000794 - 28000743
Alignment:
Q  36 taataattttaaaa-aatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||||||||||    
T  28000794 taataattttaaaataatcatataattcagtgtaattacaagtgtcggtgtc 28000743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 4157455 - 4157505
Alignment:
Q  47 aaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||||||||| | || |||||||||||||||||||| |||||||||    
T  4157455 aaaaatcacataatttagtgcaattacaagtgtcggtgtcggacacgacac 4157505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 6879505 - 6879459
Alignment:
Q  47 aaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||||    
T  6879505 aaaaatcacataattaagtgtaattacaagtgtcggtgtcggacacg 6879459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 21873448 - 21873386
Alignment:
Q  10 ggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    |||||||||||||| |||||||| || |||||||| | |||||||||||||||| || |||||    
T  21873448 ggacacgacacggacactgacactgcaaataatttgataaaatcacataattcagtgaaatta 21873386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 21929309 - 21929247
Alignment:
Q  10 ggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    |||||||||||||| |||||||| || |||||||| | |||||||||||||||| || |||||    
T  21929309 ggacacgacacggacactgacactgcaaataatttgataaaatcacataattcagtgaaatta 21929247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 35158037 - 35157975
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||||  ||||||||||||||| | |||||||| |||||||||||||  |||||||||    
T  35158037 ctaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtctgacacgacac 35157975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 12708146 - 12708207
Alignment:
Q  28 gacacagctaataatttt-aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| ||||||||||| ||||||| | |||||||| ||||||||||||||||| ||||||    
T  12708146 gacacaactaataatttttaaaaaatgaaataattcagtgtaattacaagtgtcgatgtcgt 12708207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 40179687 - 40179626
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||| ||| |||||||||||||||||| |||||||| | | |||||||||| |||||||||    
T  40179687 taatagtttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcggacacgacac 40179626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 50280852 - 50280943
Alignment:
Q  1 tacggacacggacacgacacggaaact--gacacagctaataattttaaaaaatcacataattca--atgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||  |||||||||||| ||   ||||||||||||||||| ||||| |||||||||| |   |||||||||||||| |||||||||    
T  50280852 tacggacactaacacgacacggacacgccgacacagctaataatttgaaaaattcacataattaagtgtgtaattacaagtgccggtgtcgt 50280943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 847957 - 848009
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||||||| | ||||| |||||||||| | ||||||||||||||||||||    
T  847957 gctaataatttgagaaaattacataattcactataattacaagtgtcggtgtc 848009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 27706228 - 27706176
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||| |||||||||||||||| | |||||||||||||||  |||||||    
T  27706228 taataatttaaaaaaatcacataatttagtgtaattacaagtgtgagtgtcgt 27706176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 35161025 - 35161113
Alignment:
Q  17 acacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||| || ||||| |||| |||||  | |||||||||||||||| |||||||| |||| || | |||| ||||||||||| |||||    
T  35161025 acacggacaccgacactgctactaattcaagaaaatcacataattcagtgtaattataagtatcagagtcggacacgacacgtgtccga 35161113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 15029765 - 15029824
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||| ||||||||||| |||| ||||||||||||| |||||||| | |||| |||||||    
T  15029765 gacactgctaataatttgaaaatatcacataattcagtgtaattatatgtgttggtgtcg 15029824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 20633485 - 20633535
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcg 81  Q
    ||||| ||||||||||| ||||||   |||||||||||||||||||||||||||    
T  20633485 gacaccgctaataatttgaaaaaa---cataattcaatgtaattacaagtgtcg 20633535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 37203264 - 37203315
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgt 79  Q
    ||||| ||||||||||| ||||||| |||||||| | |||||||||||||||    
T  37203264 gacacggctaataatttgaaaaaatgacataatttagtgtaattacaagtgt 37203315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 30982931 - 30982877
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||| | ||||||||||| |||| |||||||| |||||||||||||||    
T  30982931 gctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgt 30982877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 32915658 - 32915621
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  32915658 gctaataattt-aaaaaatcacataattcaatgtaatta 32915621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 35723444 - 35723382
Alignment:
Q  28 gacacagctaataattttaaaaaat-cacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    ||||| ||||||||||| | ||||| |||||||||||||||||||| | ||||| ||||||||    
T  35723444 gacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtcagtgtcgta 35723382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 37496680 - 37496761
Alignment:
Q  6 acacggacacgacacggaaac--tgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||||||||||||| || ||  |||||| | ||||  ||| | ||||| ||||||||||||||||| ||||||||||||||    
T  37496680 acacggacacgacactgacacgttgacaccgataattttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 37496761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 40774287 - 40774325
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  40774287 gctaataattttataaaatcagataattcaatgtaatta 40774325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 44362686 - 44362740
Alignment:
Q  48 aaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatc 102  Q
    ||||| |||||||| |||||||| |||||||| ||||||  ||||||||||||||    
T  44362686 aaaatgacataatttaatgtaatcacaagtgttggtgtcagacacgacacgtatc 44362740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 47263986 - 47264044
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||| ||||||||||||  ||||||||||||||||  ||||||||||| ||||| ||||    
T  47263986 gacatagctaataatttgtaaaaatcacataattctgtgtaattacaaatgtcgatgtc 47264044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 4383386 - 4383427
Alignment:
Q  47 aaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| ||||||||||| |||| |||||||    
T  4383386 aaaaatcacataattcagtgtaattacaaatgtcagtgtcgt 4383427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 24543981 - 24544038
Alignment:
Q  28 gacacagctaataattttaaaaaat-cacataattcaatgtaattacaagtgtcggtg 84  Q
    |||||| |||||||||| ||||||| ||| |||| || ||||||||||||||||||||    
T  24543981 gacacaactaataatttaaaaaaatacacttaatgcattgtaattacaagtgtcggtg 24544038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 13117449 - 13117493
Alignment:
Q  48 aaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||| ||| ||||||||||||| |||||||||||||||| ||||    
T  13117449 aaaatgacaaaattcaatgtaatcacaagtgtcggtgtcggacac 13117493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 16303317 - 16303265
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||| ||||||| | |||||| | ||||||||||||||||||||||||    
T  16303317 taatattttgaaaaaatgatataatttagtgtaattacaagtgtcggtgtcgt 16303265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 33950142 - 33950194
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||||||| | |||||||||||||| |||||||| | | |||||||||||    
T  33950142 gctaataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtc 33950194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 40481655 - 40481687
Alignment:
Q  47 aaaaatcacataattcaatgtaattacaagtgt 79  Q
    ||||||||||||||||| |||||||||||||||    
T  40481655 aaaaatcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 21191115 - 21191038
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| |||||| |||||    
T  21191115 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccga 21191038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 21576803 - 21576733
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  21576803 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgt 21576733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 31084323 - 31084383
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  31084323 gacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgt 31084383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 6247622 - 6247692
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacg 98  Q
    |||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||    
T  6247622 gacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacggcacg 6247692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 39698539 - 39698601
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||    
T  39698539 ctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgt 39698601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 42893360 - 42893437
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||  |||| |||||| |||||    
T  42893360 gacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtcagacacaacacgtgtccga 42893437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 21522750 - 21522810
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  21522750 gacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgt 21522810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 21533316 - 21533376
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  21533316 gacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgt 21533376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 8420027 - 8420086
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  8420027 gacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtcg 8420086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 15883987 - 15884057
Alignment:
Q  28 gacacagctaataattttaaaa-aatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    |||||||| |||||||| |||| |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  15883987 gacacagcaaataatttaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacac 15884057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 10298569 - 10298630
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    |||||| |||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||    
T  10298569 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcgta 10298630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 7677705 - 7677765
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||||||||||||||||| || ||||| |||||||||||||||    
T  7677705 gacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgt 7677765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 13287458 - 13287398
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||| ||||||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  13287458 gacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgt 13287398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 33178025 - 33178089
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    |||||| |||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||    
T  33178025 gacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacac 33178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 6471967 - 6471888
Alignment:
Q  9 cggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||| |||||||| ||||||||||| | |||||||||||||||| |||||||| | |||| ||||||||    
T  6471967 cggacatgacacggacactgacacggctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgt 6471888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 15405117 - 15405062
Alignment:
Q  25 actgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtc 80  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||    
T  15405117 actgacacaactaataatttgaaaaaatcatataattcaatgtaattacaagtgtc 15405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 14674269 - 14674323
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcgg 82  Q
    ||||||||||||||||| |||||||||||||||| | ||||||||||||||||||    
T  14674269 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 41633735 - 41633796
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    ||||||||||||||||| ||||| | |||||||||| ||||||||||| |||||||||||||    
T  41633735 gacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcgta 41633796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5894913 - 5894832
Alignment:
Q  1 tacggacacggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||||||||||      |||| |||||||||| ||||||||| |||||| ||| ||| ||||||||||||||||||    
T  5894913 tacggacacggacacgacacgga------cacaactaataatttgaaaaaatcatataatttaatctaactacaagtgtcggtgtcgt 5894832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 17177081 - 17177025
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    |||||||||||||||| ||||||||| | |||||| |||||||||||||||||||||    
T  17177081 acacagctaataatttgaaaaaatcaaaaaattcattgtaattacaagtgtcggtgt 17177025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 19579701 - 19579761
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| | |||||||||||||| | || |||||||||||||||||||||    
T  19579701 gacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgt 19579761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 21542030 - 21542090
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||| |||| || |||||||||| ||||||||||||||||||||||||    
T  21542030 gacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgt 21542090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 7218326 - 7218271
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggt 83  Q
    |||| |||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  7218326 gacagagctaataatttaaataaatcacataattcagtgtaattacaagtgtcggt 7218271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 24906359 - 24906292
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgaca 96  Q
    |||||| ||||||||| ||||||| |||||||||| ||||||||||||||||||| ||| ||| ||||    
T  24906359 acacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtatcggacatgaca 24906292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 21351964 - 21351906
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||| |||||||||  ||||| |||||||||||| ||||||||||||||||||||||    
T  21351964 gacacaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtc 21351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 28588725 - 28588659
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatc 102  Q
    ||||||||| | |||||||||||||||| |||||||| | |||||||||||| ||||||||| ||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggacacgacacatatc 28588659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 30502446 - 30502378
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    |||| ||||||||||| | |||||||| ||||||| |||||||| | |||||||||||| |||||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacac 30502378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 30542789 - 30542721
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    |||| ||||||||||| | |||||||| ||||||| |||||||| | |||||||||||| |||||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacac 30542721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 37328903 - 37328843
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||| ||||||||  |||||||||| |||||| |||||||||| |||||||||||||    
T  37328903 gacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtcgt 37328843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 43001800 - 43001856
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtg 84  Q
    ||||| ||||||||||| ||||||| |||||||||| ||||||||||||||| ||||    
T  43001800 gacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtg 43001856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 12159952 - 12160007
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggt 83  Q
    |||||| |||||||||| |||||| ||||||||| ||||||||||||| |||||||    
T  12159952 gacacaactaataatttaaaaaaaacacataatttaatgtaattacaaatgtcggt 12160007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 27932235 - 27932306
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    ||||| ||||||||||| | ||||| |||||||||| ||||||||||| | | ||||||| |||||||||||    
T  27932235 gacaccgctaataatttgagaaaattacataattcagtgtaattacaaatcttggtgtcggacacgacacgt 27932306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 30135313 - 30135372
Alignment:
Q  28 gacacagctaataattttaaaa-aatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||| |||||||||| |||| |||||||||| ||| ||||||||||||||||||||||    
T  30135313 gacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtgtcggtgtc 30135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 43564891 - 43564958
Alignment:
Q  38 ataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||||  ||||||||||||||| | |||||||| |||||||||||||| |||||||| || |||||    
T  43564891 ataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgacatgtgtccga 43564958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 15382477 - 15382538
Alignment:
Q  28 gacacagctaataattttaaaaaa--tcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||||||||||||||| ||||||  ||| |||||||| | |||||||||||||||||||||    
T  15382477 gacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcggtgtcg 15382538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 32767020 - 32766958
Alignment:
Q  10 ggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    |||||||||||||| || ||||| ||||||||||| | |||||| || |||||||||||||||    
T  32767020 ggacacgacacggacaccgacaccgctaataatttgagaaaatcgcacaattcaatgtaatta 32766958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 41995471 - 41995530
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    |||||| |||||||||  ||||||||||||||||||||||||||  ||||||||||| ||||    
T  41995471 gacacaactaataattcgaaaaaatcacataattcaatgtaatt--aagtgtcggtgccgta 41995530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 42029767 - 42029821
Alignment:
Q  43 tttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    |||| ||||||||||||||||||||||||| | || ||||||||| |||||||||    
T  42029767 tttagaaaatcacataattcaatgtaattatatgtatcggtgtcggacacgacac 42029821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 3966503 - 3966563
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||||||||||| | ||||||||| |||||| |||||||| | |||||||||||||    
T  3966503 gacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgt 3966563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 14422907 - 14422968
Alignment:
Q  31 acagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacga 94  Q
    ||||||||||||||  ||||||||||||||||| |||||||| |||| ||| ||||| ||||||    
T  14422907 acagctaataattt--aaaaatcacataattcagtgtaattataagtttcgatgtcggacacga 14422968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 17925223 - 17925167
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||||||| | ||||||||||||||||||||||| | | |||||||||||| ||||    
T  17925223 taataatttaagaaaatcacataattcaatgtaataatatgtgtcggtgtcgaacac 17925167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 30183549 - 30183609
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||| |||| ||||||| ||||  | ||||||||||||||||||||||    
T  30183549 gacacaactaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtcgt 30183609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 40131618 - 40131682
Alignment:
Q  25 actgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    ||||| ||| |||||||||| |||||||||||||||||| | |||||| || | |||||||||||    
T  40131618 actgatacaactaataatttgaaaaaatcacataattcagtttaattataaatatcggtgtcgta 40131682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 23012461 - 23012398
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||||| | ||||||| |||||| |||||||||| | |||||||||| | |||||||||    
T  23012461 gctaataatttgagaaaatcatataatttaatgtaattatatgtgtcggtgttggacacgacac 23012398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 32630796 - 32630717
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||| | ||||||||| | ||||| | ||||||||||||||||| | ||||| |||||| | ||||||||| |||||    
T  32630796 ctgacaccgataataatttgagaaaattatataattcaatgtaattatatgtgtcagtgtcggatacgacacgtgtccga 32630717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 11685910 - 11685999
Alignment:
Q  1 tacggacacggacacgacacggaaa--ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||||||| || |  | ||||| ||||||||||| | ||| || ||||||| | |||||||| | |||||||||||||    
T  11685910 tacggacacggacacgacactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcgt 11685999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 12199948 - 12199990
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||||| |  |||||||||||||||||||||    
T  12199948 aaaaaatcacataattcagtacaattacaagtgtcggtgtcgt 12199990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 22423873 - 22423811
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||  |||||||||| | |||||||||||||||||| |||||| |  ||||||||||||    
T  22423873 ctgacactactaataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgt 22423811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 24273092 - 24273015
Alignment:
Q  25 actgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||||||| || |||||| | |||||||||||||||| |||||||| | ||   ||||| ||||||||||| |||||||    
T  24273092 actgacacagttattaatttgagaaaatcacataattcagtgtaattatatgt---ggtgtggtacacgacacatatccga 24273015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 24389122 - 24389199
Alignment:
Q  25 actgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||||||| || |||||| | |||||||||||||||| |||||||| | ||   ||||| ||||||||||| |||||||    
T  24389122 actgacacagttattaatttgagaaaatcacataattcagtgtaattatatgt---ggtgtggtacacgacacatatccga 24389199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 6770540 - 6770610
Alignment:
Q  25 actgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||| |||||||||| | |||||||||||||||| |||| ||  | ||||| |||||| |||||||||    
T  6770540 actgacacaactaataatttaagaaaatcacataattcagtgtactt--atgtgtcagtgtcggacacgacac 6770610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 16203854 - 16203785
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||| ||||||||||| | |||||| ||||||| | |||||||| | |||||||||||| ||| |||||    
T  16203854 gacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgtcggacaagacac 16203785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 18421900 - 18421831
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||| ||| ||||||| | ||||||||||||| || |||||||| | ||||||| |||| |||||||||    
T  18421900 gacactgctgataatttgagaaaatcacataatccagtgtaattatatgtgtcggcgtcggacacgacac 18421831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 38749614 - 38749565
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||||||| ||||||| ||||||||||||||||||| | |||| |||||    
T  38749614 taataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgt 38749565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 2436922 - 2436982
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| |||||||||||  ||||||||||||||||  ||| |||| | |||||||||||||    
T  2436922 gacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcggtgtcgt 2436982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 2952265 - 2952309
Alignment:
Q  25 actgacacagctaataattt-taaaaaatcacataattcaatgta 68  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||    
T  2952265 actgacacagctaataatttaaaaaaaatcacataattcagtgta 2952309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 16374393 - 16374341
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||  ||||||| |||||| ||| |||||||||| |||||||||||||    
T  16374393 taataattgaaaaaaataacataaatcagtgtaattacatgtgtcggtgtcgt 16374341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 17088281 - 17088337
Alignment:
Q  25 actgacacagctaataattttaaaa-aatcacataattcaatgtaattacaagtgtc 80  Q
    ||||||||| |||||||||| |||| |||||||||||| | ||| ||||||||||||    
T  17088281 actgacacatctaataatttgaaaaaaatcacataatttagtgtgattacaagtgtc 17088337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 18316984 - 18316952
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataat 60  Q
    |||||| ||||||||||||||||||||||||||    
T  18316984 gacacaactaataattttaaaaaatcacataat 18316952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 18592073 - 18592133
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||||||| ||| | ||||| ||||||||||||||||||| | ||| |||||||||    
T  18592073 gacaccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgt 18592133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 19167617 - 19167577
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||| ||| ||||||||||||| |||||||||||||||    
T  19167617 aaaaaatgacacaattcaatgtaatcacaagtgtcggtgtc 19167577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 21814261 - 21814321
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||  ||||| ||||||||| ||| || |||||||| | |||||||||||||    
T  21814261 gacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgt 21814321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 22299539 - 22299492
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaag 76  Q
    ||||||||||||||||| |||||||||||| ||||| | ||||||||||    
T  22299539 gacacagctaataattt-aaaaaatcacatgattcagtataattacaag 22299492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 30098334 - 30098370
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||||||| | |||||||||||||||||||||||||    
T  30098334 taataatttgagaaaatcacataattcaatgtaatta 30098370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 30136722 - 30136678
Alignment:
Q  39 taattttaaaaaatcacataattcaatgtaattacaagtgtcggt 83  Q
    |||||||||||||| || |||||||||||||||| || |||||||    
T  30136722 taattttaaaaaattacgtaattcaatgtaattataaatgtcggt 30136678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 41091316 - 41091256
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| |||||| |||| | |||||||||||||||| |||||||| | |||||| ||||||    
T  41091316 gacactgctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgt 41091256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 51206424 - 51206348
Alignment:
Q  16 gacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| ||||    
T  51206424 gacacggacactgacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcggacac 51206348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 28917974 - 28918080
Alignment:
Q  9 cggacacgacacggaaactgacac--------agctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt--acacgacacg 98  Q
    ||||||||||||||||||||||||        |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||  ||||||||||    
T  28917974 cggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacg 28918073  T
Q  99 tatccga 105  Q
    | |||||    
T  28918074 tgtccga 28918080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 10954952 - 10955029
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||| |||||||||| |||||||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||    
T  10954952 gacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccga 10955029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 55401075 - 55401152
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||| |||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||||||| |||||    
T  55401075 gacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccga 55401152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 1509536 - 1509599
Alignment:
Q  25 actgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  1509536 actgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgt 1509599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 26508108 - 26508166
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtg 84  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  26508108 ctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 14209113 - 14209173
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  14209113 gacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgt 14209173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 27505246 - 27505306
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  27505246 gacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtcgt 27505306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 49651845 - 49651785
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  49651845 gacacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgt 49651785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 24633489 - 24633391
Alignment:
Q  1 tacggacacggacacgacacggaaact--gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||||||||||||||||| ||| |||  ||||||| |||||||||  ||||||||| |||||||||||||||| | |||||||||| | |||||||||    
T  24633489 tacggacacggacacgacatggacactctgacacagttaataatttggaaaaatcacgtaattcaatgtaattatatgtgtcggtgttggacacgacac 24633391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 14832102 - 14832159
Alignment:
Q  31 acagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  14832102 acagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgt 14832159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 21257046 - 21256985
Alignment:
Q  27 tgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||||| |||||||||||||||||| | ||||||||||||||||| ||||    
T  21257046 tgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtatcgt 21256985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 34910317 - 34910378
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||||||    
T  34910317 gacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgta 34910378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 4987350 - 4987294
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtg 84  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  4987350 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtg 4987294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 7928424 - 7928515
Alignment:
Q  1 tacggacacggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    |||||||||||||| |||| | | || ||||| ||||||||||| |||||||||||||||||| |||||||| | |||||||||||| |||||    
T  7928424 tacggacacggacatgacaag-acaccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacg 7928515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 34185182 - 34185122
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  34185182 gacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgt 34185122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 21479118 - 21479177
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||||| |||||||||||||    
T  21479118 gacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtcg 21479177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 40993423 - 40993325
Alignment:
Q  2 acggacacggacacgacacggaaact--gacacagctaataattttaaaaaa-tcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||| |||||||||||||||| ||   ||||| ||||||||||| |||||| |||||||||||| |||||||| | |||||||||||| |||||||||    
T  40993423 acggatacggacacgacacggacacctcgacaccgctaataatttaaaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacac 40993325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 20503437 - 20503534
Alignment:
Q  2 acggacacggacacgacacggaaact--gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||| ||||||||||||| || ||   |||||| | |||||||| ||||||| |||||||||| ||||||||||||||||||||| | |||||||||    
T  20503437 acggatacggacacgacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttggacacgacac 20503534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 16000075 - 16000010
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    |||||| |||||||||| ||||||| |||||||||| ||||| ||||||||||||||||| |||||    
T  16000075 gacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtcggacacg 16000010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 26492264 - 26492195
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    |||| |||||||||||| ||||||||| | |||||| ||||||||||||| ||||||||| |||||||||    
T  26492264 gacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcggacacgacac 26492195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 55212963 - 55213020
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||||| |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  55212963 gacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcggtgt 55213020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 14216892 - 14216952
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| ||||||||||||||| |||| |||||||| |||||||||||||||| |||||||    
T  14216892 gacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgt 14216952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 14223021 - 14223081
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| ||||||||||||||| |||| |||||||| |||||||||||||||| |||||||    
T  14223021 gacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgt 14223081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 14829690 - 14829749
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||| |||||||||||||  |||||||||||||||||||||||    
T  14829690 gacacagctaataatttgaaaa-atcacataattcatggtaattacaagtgtcggtgtcgt 14829749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 15796353 - 15796293
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||| ||||||||| ||||||||| |||||||| ||||||||||| ||||||||||||    
T  15796353 gacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgt 15796293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 28812515 - 28812575
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||| || ||||||||||||||| |||| |||||||||||||||||||    
T  28812515 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 28812575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 39756244 - 39756296
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  39756244 taataatttaaaaaaatcacataatttaatataattacaagtgtcggtgtcgt 39756296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 8587080 - 8587021
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    |||||| ||| |||||| |||||||||||||||| | |||||||||||||||||||||||    
T  8587080 gacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtcg 8587021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 14027988 - 14028067
Alignment:
Q  9 cggacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||| || ||||||||||||  ||||| ||||||||| ||| || |||||||| | |||||||||||||    
T  14027988 cggacacgacacggacaccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgt 14028067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 35222938 - 35223009
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    |||||| |||| | ||||| ||||||||||||||||||||||||| | |||||||||||| ||| |||||||    
T  35222938 gacacaactaacatttttagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacatgacacgt 35223009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 10268545 - 10268487
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    ||||||| ||||||||| |||||||||||||||| | |||||||||||||||| |||||    
T  10268545 gacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtc 10268487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 25775516 - 25775574
Alignment:
Q  36 taataattttaaaa-aatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    ||||||||| |||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  25775516 taataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtcggacacg 25775574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 25948940 - 25948886
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||| ||||||||    
T  25948940 gctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgt 25948886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 8383257 - 8383322
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    ||||| ||||||||||| | ||||||| |||||||| |||||||| |||||||||||||| |||||    
T  8383257 gacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacacg 8383322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 8593135 - 8593196
Alignment:
Q  27 tgacacagctaataatttt-aaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||||||||| ||||||  |||||||||||||||||| | |||||||||||||||||||||    
T  8593135 tgacacagctactaatttggaaaaaatcacataattcagtataattacaagtgtcggtgtcg 8593196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 35994796 - 35994744
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcg 81  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  35994796 gacacagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcg 35994744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 38731224 - 38731277
Alignment:
Q  34 gctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    |||||||||||||||||||||||||||||| |||| ||| | ||||||||||||    
T  38731224 gctaataattttaaaaaatcacataattcagtgtagttatatgtgtcggtgtcg 38731277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 750677 - 750617
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||| |||| ||||||||||||  || |||||||||||||||||||||    
T  750677 gacacaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtcgt 750617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 3164084 - 3164024
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||||||||||||||||| |||||  |||||||| | ||||||    
T  3164084 gacacagctaataatttgaaaaaatcacataattcagtgtaagaacaagtgttgatgtcgt 3164024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 8930880 - 8930828
Alignment:
Q  37 aataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    |||||||||||||||||||||||||| ||||||||| | |||||| |||||||    
T  8930880 aataattttaaaaaatcacataattcgatgtaattatatgtgtcgatgtcgta 8930828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 14338524 - 14338468
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatc 102  Q
    ||||||| ||||||||||||||||| |||| ||||||||||  ||||||||||||||    
T  14338524 aaaaaatgacataattcaatgtaatcacaaatgtcggtgtcagacacgacacgtatc 14338468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 11610522 - 11610573
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtc 80  Q
    |||| ||||||||||| |||||||||||||||||| |||| |||||||||||    
T  11610522 acaccgctaataatttaaaaaaatcacataattcagtgtagttacaagtgtc 11610573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 14979181 - 14979224
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaatt 71  Q
    ||||||||||||||||| |||||||||||||||||| |||||||    
T  14979181 gacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 7171520 - 7171578
Alignment:
Q  47 aaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||||| |||||||  ||||||||||||||| ||||||| ||||||||||| |||||    
T  7171520 aaaaatcatataattcggtgtaattacaagtgttggtgtcggacacgacacgtgtccga 7171578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 10335345 - 10335275
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacg 98  Q
    |||||| |||||||||| ||||| ||||||| || | ||||| |||||||||||||||||  |||||||||    
T  10335345 gacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcgggcacgacacg 10335275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 41961707 - 41961649
Alignment:
Q  30 cacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||| |||||||||| |||| ||||||| ||||  ||||||||||||||||||||||||    
T  41961707 cacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcgt 41961649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 3865692 - 3865745
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    ||||| |||||||||||| | ||||||||||||||||||||  |||||||||||    
T  3865692 aaaaactcacataattcagtataattacaagtgtcggtgtctgacacgacacgt 3865745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 8789609 - 8789540
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    ||||| ||| ||||||| | |||||||||||||||  |||||||| | |||||||||||| |||||||||    
T  8789609 gacacggcttataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcggacacgacac 8789540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 9624640 - 9624685
Alignment:
Q  27 tgacacagctaataattttaaaaaatcacataattcaatgtaatta 72  Q
    |||||| ||||||||||| | |||||||||||||||||||||||||    
T  9624640 tgacactgctaataatttgagaaaatcacataattcaatgtaatta 9624685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 13414452 - 13414533
Alignment:
Q  11 gacacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacac 92  Q
    ||||||||||||| || |||||| | ||   ||||| ||||||| ||||||||||||||||| | |||||||||||| ||||    
T  13414452 gacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcaatgtaattatatgtgtcggtgtcggacac 13414533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 14747561 - 14747622
Alignment:
Q  28 gacacagctaataattttaaaa-aatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||| |||||||||||| | |||||||||||| ||| |||||||    
T  14747561 gacacagctaataatttgaaaaaaatcacataatttagtgtaattacaagggtccgtgtcgt 14747622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 18426956 - 18427025
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccg 104  Q
    |||||||||| |||||||||||||||||  |||||||| |  ||||||||||| | ||||||||| ||||    
T  18426956 ctaataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgtcggatacgacacgtgtccg 18427025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 4991026 - 4990966
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||||||| ||| | ||||| |||||||||| |||||||||||||||||| |||||    
T  4991026 gacaccgctaatagtttgagaaaattacataattcagtgtaattacaagtgtcggcgtcgt 4990966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 7614488 - 7614404
Alignment:
Q  14 acgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacg 98  Q
    ||||||| || || ||||||| ||||||||| | |||||||||||||||| | |||||| |  ||||||||||| ||||| ||||    
T  7614488 acgacacagacaccgacacagttaataatttaagaaaatcacataattcagtataattatatatgtcggtgtcgaacacggcacg 7614404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 11251963 - 11252052
Alignment:
Q  13 cacgacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccg 104  Q
    ||||||| ||| |||||||  ||||||||||| | |||||||||||||||| |||||||  | |||||||||||  |||| |||||| ||||    
T  11251963 cacgacatggacactgacattgctaataatttgagaaaatcacataattcagtgtaatt--atgtgtcggtgtcagacacaacacgtgtccg 11252052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 40052304 - 40052367
Alignment:
Q  2 acggacacggacacgacacggaaact--gacacagctaataattttaaaaaatcacataattca 63  Q
    ||||| ||||||||||||| || ||   ||||||||||||||||| ||||||||||||||||||    
T  40052304 acggatacggacacgacactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 32400764 - 32400702
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacg 93  Q
    ||||||||||||||||| |||| || ||||||||   |||||||||||||||| |||||| |||||    
T  32400764 gacacagctaataatttgaaaagattacataatt---tgtaattacaagtgtccgtgtcggacacg 32400702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 34307841 - 34307786
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcg 81  Q
    ||||||| ||||||||||| | ||||||||||| |||| |||||||| ||||||||    
T  34307841 ctgacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 17005671 - 17005621
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    |||||||||| | ||||||| |||||||| |||||||| ||||||||||||    
T  17005671 ctaataatttgataaaatcatataattcagtgtaattataagtgtcggtgt 17005621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 15314940 - 15314875
Alignment:
Q  23 aaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||  || |||||| |||||||||||||||| | |||||||| | |||| ||||||||    
T  15314940 aaactgacacaattattaatttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcgt 15314875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 33359759 - 33359820
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||||||||||||||||| ||||  ||||||| || | ||||| |||||||||| ||||||    
T  33359759 ctgacacagctaataatttgaaaaggtcacatattttagtgtaaatacaagtgtcagtgtcg 33359820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 45451541 - 45451622
Alignment:
Q  16 gacacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacac 97  Q
    |||||||| ||  |||| ||||||||||| | ||||||||||| |||| | |||| | | |||||||||||| |||||||||    
T  45451541 gacacggacacgaacactgctaataatttgagaaaatcacatacttcagtataataatatgtgtcggtgtcggacacgacac 45451622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 72
Target Start/End: Original strand, 39002044 - 39002076
Alignment:
Q  40 aattttaaaaaatcacataattcaatgtaatta 72  Q
    ||||| |||||||||||||||||||||||||||    
T  39002044 aatttgaaaaaatcacataattcaatgtaatta 39002076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 521 - 444
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||| ||||||||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||| ||| |||||    
T  521 gacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgtccga 444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 8798 - 8875
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||||||||||| ||||||||| || ||| | ||||||||||||||||||||||| ||||||||||| |||||    
T  8798 gacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccga 8875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 70278 - 70355
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||| ||||||||| ||||||| |||||||||| |||||||| |||||||||||||| ||||||||||| |||||    
T  70278 gacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccga 70355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 20172 - 20232
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||    
T  20172 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgt 20232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 17810 - 17750
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||||| |||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  17810 ctgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 17750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 14530 - 14604
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||||   ||||||| ||||||||||| |||||    
T  14530 gacacaactaataatttgaaaaaatcacataattcagtgtaattacaagt---ggtgtcggacacgacacgtgtccga 14604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 51811 - 51862
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgt 79  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  51811 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 46682 - 46741
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  46682 gacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 46741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 7091 - 7017
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgacacgtatc 102  Q
    ||||||||||||||||| ||||||| |||||||| | | ||||||||||||| ||||||| |||| |||||||||    
T  7091 gacacagctaataatttgaaaaaattacataatttagtataattacaagtgtaggtgtcggacacaacacgtatc 7017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 4943 - 4871
Alignment:
Q  28 gacacagctaataattttaaaaaa-tcacataattcaatgtaattacaagtgtcggtgtc--gtacacgacac 97  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||||  |||||||||||    
T  4943 gacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacac 4871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 3900 - 3848
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||| |||||||||||||||||| |||||||||||||||| |||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgt 3848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 23766 - 23830
Alignment:
Q  25 actgacacagctaataattttaaaa-aatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||| ||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  23766 actgtcacagttaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgt 23830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 130482 - 130538
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtg 84  Q
    ||||||| ||||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  130482 gacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 130538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 123626 - 123686
Alignment:
Q  29 acacagctaataattttaaaaaa---tcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||||||||||||| ||||||   |||||||||||| ||||||||||||||||||||||    
T  123626 acacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagtgtcggtgtc 123686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 83172 - 83221
Alignment:
Q  40 aattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    ||||| ||||||| |||||||||| ||||||||||| |||||||||||||    
T  83172 aatttaaaaaaatgacataattcagtgtaattacaaatgtcggtgtcgta 83221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 92807 - 92859
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtc 80  Q
    ||||| ||||||||||| | ||||| |||||||||| ||||||||||||||||    
T  92807 gacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 45563 - 45518
Alignment:
Q  54 acataattcaatgtaattacaagtgtcggtgtcgtacacgacacgt 99  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgt 45518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 6301 - 6373
Alignment:
Q  17 acacggaaactgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgta 89  Q
    ||||||| || ||||| ||||||||||| | |||||  |||||||||||||||||| | ||||||||||||||    
T  6301 acacggacacggacactgctaataatttgacaaaattgcataattcaatgtaattatatgtgtcggtgtcgta 6373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 23420 - 23480
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||| |||||| |  |||||||||||||||||| |||||||| |||||||||||||||    
T  23420 gacacagataataactcaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgt 23480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 23529 - 23571
Alignment:
Q  46 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||||| |||||||| ||||||| |||||||    
T  23529 aaaaaatcacataattcagtgtaattataagtgtcagtgtcgt 23571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 8010 - 8077
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgtacacgaca 96  Q
    |||||| |||||||||| ||||||||| ||||| || |||||||| |||||||||||||| ||||||||    
T  8010 gacacaactaataatttgaaaaaatcatataatacagtgtaatta-aagtgtcggtgtcggacacgaca 8077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 241594 - 241654
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||||||||||  ||||||||||||||| | ||||||||  ||||||||||||||    
T  241594 gacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgt 241654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 13400 - 13459
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    |||||| |||||||||| | |||||||||||||||| || ||||||||| ||||||||||    
T  13400 gacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcg 13459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 21927 - 21868
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 87  Q
    |||||| |||||||||| | |||||||||||||||| || ||||||||| ||||||||||    
T  21927 gacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcg 21868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 33422 - 33375
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaa 75  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||||||    
T  33422 gacacagctaataatttgaaaaaataacataattcagtgtaattacaa 33375  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 178878 - 178819
Alignment:
Q  28 gacacagctaataattttaaaaaatca-cataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||||| |||||||||| ||||||||| ||||||||| |||||||||||||||| |||||    
T  178878 gacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtcagtgtc 178819  T

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Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 63774 - 63831
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 86  Q
    |||| ||||||||||| | ||||| |||||||||| || |||||||||||||||||||    
T  63774 acaccgctaataatttgagaaaattacataattcagtgcaattacaagtgtcggtgtc 63831  T

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Target: scaffold0512 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 5058 - 5018
Alignment:
Q  65 tgtaattacaagtgtcggtgtcgtacacgacacgtatccga 105  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  5058 tgtaattacaagtgtcggtgtcggacacgacacgtgtccga 5018  T

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Target: scaffold0450 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 8694 - 8634
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| |||||||||| |||| ||||||||||||  | ||||||||| ||||||||||||    
T  8694 gacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgt 8634  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 99901 - 99953
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||| ||||| ||||||||||||||||||| | |||| ||||||||    
T  99901 taataattttagaaaataacataattcaatgtaattatatgtgttggtgtcgt 99953  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 135371 - 135311
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||| ||||||||||| | |||||||||||||||  |||||||| | |||||||||||||    
T  135371 gacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgt 135311  T

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Target: scaffold0044 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 53189 - 53236
Alignment:
Q  37 aataattttaaaaaatcacataattcaatgtaattacaagtgtcggtg 84  Q
    |||||||| | |||||||||||||||| |||||||| |||||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtg 53236  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 71723 - 71785
Alignment:
Q  28 gacacagctaataattttaaaa--aatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||||||||||||| ||||  ||||||| |||||| ||||||||| |||||| |||||||    
T  71723 gacacagctaataatttgaaaaaaaatcacacaattcagtgtaattactagtgtcagtgtcgt 71785  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 263430 - 263371
Alignment:
Q  29 acacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||| ||||||||||| | |||| ||||||||||| |||||||| ||||||| |||||||    
T  263430 acactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgt 263371  T

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Target: scaffold0123 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 44586 - 44524
Alignment:
Q  26 ctgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    ||||||| ||||| ||||| | |||||||||||||||| |||||||| | |||||||| ||||    
T  44586 ctgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgt 44524  T

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Target: scaffold0057 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 24025 - 24071
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattaca 74  Q
    |||||||||||||||||| ||||||| ||||||| | ||||||||||    
T  24025 gacacagctaataattttcaaaaatctcataatttagtgtaattaca 24071  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 25828 - 25767
Alignment:
Q  27 tgacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||| | ||||||||  | |||||||||||||| | |||||||| |||||||||||||||    
T  25828 tgacacggttaataattagagaaaatcacataatttagtgtaattataagtgtcggtgtcgt 25767  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 28858 - 28907
Alignment:
Q  36 taataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgt 85  Q
    ||||||||| | |||||| |||||||||||||||||| | ||||||||||    
T  28858 taataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgt 28907  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 9799 - 9746
Alignment:
Q  35 ctaataattttaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgt 88  Q
    |||||||||| | |||||||| ||||||| |||||||| | |||||||||||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgt 9746  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 225327 - 225274
Alignment:
Q  28 gacacagctaataattttaaaaaatcacataattcaatgtaattacaagtgtcg 81  Q
    ||||||| ||||||||| | ||||| ||||||| ||||||||||| ||||||||    
T  225327 gacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcg 225274  T

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Target: scaffold0246 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 19594 - 19626
Alignment:
Q  47 aaaaatcacataattcaatgtaattacaagtgt 79  Q
    ||||||||||||||||| |||||||||||||||    
T  19594 aaaaatcacataattcagtgtaattacaagtgt 19626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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