View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0942_low_68 (Length: 360)

Name: NF0942_low_68
Description: NF0942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0942_low_68
NF0942_low_68
[»] chr2 (33 HSPs)
chr2 (25-198)||(2665790-2665963)
chr2 (40-123)||(44860319-44860404)
chr2 (55-119)||(34784961-34785027)
chr2 (41-91)||(21616762-21616812)
chr2 (44-90)||(36281688-36281734)
chr2 (42-123)||(2331795-2331876)
chr2 (42-91)||(30527604-30527653)
chr2 (55-91)||(20922937-20922973)
chr2 (62-123)||(28524447-28524510)
chr2 (42-123)||(22084805-22084890)
chr2 (41-91)||(23718026-23718076)
chr2 (41-91)||(24105698-24105748)
chr2 (41-91)||(31808077-31808127)
chr2 (41-91)||(37411253-37411303)
chr2 (40-124)||(4207856-4207941)
chr2 (42-95)||(28412351-28412404)
chr2 (41-90)||(28677909-28677958)
chr2 (42-87)||(31018591-31018636)
chr2 (42-91)||(35449514-35449563)
chr2 (42-91)||(39279676-39279725)
chr2 (55-91)||(20242736-20242772)
chr2 (41-92)||(19573978-19574029)
chr2 (44-87)||(23921256-23921299)
chr2 (59-123)||(35056886-35056952)
chr2 (41-96)||(36409631-36409686)
chr2 (49-91)||(5367200-5367242)
chr2 (41-91)||(16069263-16069313)
chr2 (41-91)||(18276521-18276571)
chr2 (46-88)||(35191591-35191633)
chr2 (49-86)||(21782832-21782869)
chr2 (41-85)||(30404865-30404909)
chr2 (54-123)||(38355862-38355933)
chr2 (48-88)||(40361766-40361806)
[»] scaffold0123 (1 HSPs)
scaffold0123 (40-123)||(44500-44585)
[»] chr8 (38 HSPs)
chr8 (40-111)||(11803258-11803331)
chr8 (41-91)||(39954288-39954338)
chr8 (41-91)||(4786347-4786397)
chr8 (49-91)||(14731720-14731762)
chr8 (41-91)||(34897085-34897135)
chr8 (47-91)||(33405393-33405437)
chr8 (41-91)||(11927095-11927145)
chr8 (49-91)||(13844605-13844647)
chr8 (49-120)||(15816107-15816180)
chr8 (41-91)||(24362211-24362261)
chr8 (49-123)||(2572031-2572107)
chr8 (41-90)||(4611534-4611583)
chr8 (44-89)||(13018284-13018329)
chr8 (42-91)||(20785474-20785523)
chr8 (49-118)||(29776044-29776113)
chr8 (39-91)||(12570517-12570569)
chr8 (47-87)||(31580140-31580180)
chr8 (49-88)||(14134707-14134746)
chr8 (49-87)||(3025559-3025597)
chr8 (29-91)||(7472524-7472586)
chr8 (41-91)||(11944665-11944715)
chr8 (46-88)||(24447034-24447076)
chr8 (49-91)||(27213555-27213597)
chr8 (49-91)||(31236586-31236628)
chr8 (49-91)||(34222955-34222997)
chr8 (39-88)||(12570746-12570795)
chr8 (40-85)||(24669432-24669477)
chr8 (51-88)||(26529751-26529788)
chr8 (58-91)||(26902184-26902217)
chr8 (42-91)||(33382028-33382077)
chr8 (43-96)||(37283814-37283867)
chr8 (41-85)||(4298901-4298945)
chr8 (49-85)||(8342980-8343016)
chr8 (49-85)||(8343324-8343360)
chr8 (40-80)||(18067954-18067994)
chr8 (55-91)||(18964191-18964227)
chr8 (49-85)||(20873077-20873113)
chr8 (51-100)||(22493504-22493555)
[»] chr3 (39 HSPs)
chr3 (41-91)||(32804549-32804599)
chr3 (44-91)||(49505163-49505210)
chr3 (49-91)||(11313809-11313851)
chr3 (41-91)||(16192759-16192809)
chr3 (41-123)||(25064909-25064991)
chr3 (41-123)||(55212963-55213046)
chr3 (50-122)||(15812799-15812871)
chr3 (48-108)||(2731819-2731881)
chr3 (49-129)||(11665952-11666034)
chr3 (42-88)||(4201397-4201443)
chr3 (41-91)||(7928450-7928500)
chr3 (42-113)||(8039820-8039893)
chr3 (40-147)||(34307737-34307840)
chr3 (49-123)||(4987266-4987342)
chr3 (49-123)||(14209121-14209197)
chr3 (42-87)||(14840304-14840349)
chr3 (41-123)||(15796269-15796353)
chr3 (49-86)||(27277852-27277889)
chr3 (41-85)||(10268501-10268545)
chr3 (41-88)||(7614427-7614474)
chr3 (41-88)||(8842330-8842376)
chr3 (41-88)||(10690274-10690321)
chr3 (49-96)||(11251986-11252033)
chr3 (52-91)||(15314885-15314924)
chr3 (44-91)||(38731221-38731268)
chr3 (49-119)||(2620034-2620104)
chr3 (41-87)||(8383257-8383303)
chr3 (41-91)||(25093502-25093552)
chr3 (46-84)||(28098143-28098181)
chr3 (49-91)||(48202278-48202320)
chr3 (40-85)||(1509538-1509583)
chr3 (40-89)||(9624640-9624689)
chr3 (46-91)||(11658820-11658865)
chr3 (49-90)||(12704015-12704056)
chr3 (49-123)||(17005594-17005670)
chr3 (51-91)||(8789559-8789599)
chr3 (49-89)||(11493372-11493412)
chr3 (55-91)||(35222952-35222988)
chr3 (49-85)||(55401083-55401119)
[»] chr1 (60 HSPs)
chr1 (49-123)||(12713302-12713378)
chr1 (49-123)||(12717393-12717469)
chr1 (41-91)||(39953155-39953205)
chr1 (41-88)||(34257922-34257969)
chr1 (51-119)||(44482240-44482310)
chr1 (41-91)||(1864889-1864939)
chr1 (49-123)||(12707848-12707924)
chr1 (49-90)||(14332652-14332693)
chr1 (38-87)||(25272479-25272528)
chr1 (41-118)||(17754311-17754390)
chr1 (48-91)||(39130776-39130819)
chr1 (41-91)||(2784556-2784606)
chr1 (49-91)||(7918220-7918262)
chr1 (41-91)||(13997883-13997933)
chr1 (41-91)||(25098564-25098614)
chr1 (51-114)||(25361896-25361961)
chr1 (41-123)||(26238091-26238171)
chr1 (40-123)||(34371713-34371797)
chr1 (49-91)||(34712392-34712434)
chr1 (41-87)||(36878461-36878507)
chr1 (42-91)||(6427351-6427400)
chr1 (49-123)||(16164290-16164366)
chr1 (49-90)||(40181879-40181920)
chr1 (51-91)||(19324572-19324612)
chr1 (55-91)||(30749854-30749890)
chr1 (55-91)||(30771305-30771341)
chr1 (41-85)||(41877485-41877529)
chr1 (49-114)||(42004937-42004998)
chr1 (25-88)||(48148049-48148112)
chr1 (42-114)||(36905998-36906072)
chr1 (44-91)||(52903252-52903299)
chr1 (41-87)||(398778-398824)
chr1 (49-91)||(10233261-10233303)
chr1 (49-91)||(12443469-12443511)
chr1 (49-91)||(13436466-13436508)
chr1 (41-91)||(17425102-17425152)
chr1 (41-91)||(17831540-17831590)
chr1 (41-91)||(20157359-20157409)
chr1 (41-87)||(21530689-21530735)
chr1 (42-88)||(28674801-28674847)
chr1 (41-91)||(32724107-32724157)
chr1 (49-87)||(34298444-34298482)
chr1 (49-91)||(35999331-35999373)
chr1 (41-91)||(38503320-38503370)
chr1 (42-91)||(9709821-9709870)
chr1 (49-123)||(9828052-9828128)
chr1 (49-107)||(10572580-10572640)
chr1 (47-84)||(15323169-15323206)
chr1 (51-88)||(20131987-20132024)
chr1 (49-123)||(32461439-32461514)
chr1 (55-88)||(45534202-45534235)
chr1 (49-119)||(47989505-47989577)
chr1 (41-81)||(2896140-2896180)
chr1 (41-89)||(5898277-5898325)
chr1 (49-85)||(22515902-22515938)
chr1 (49-85)||(22881631-22881667)
chr1 (58-123)||(25934633-25934700)
chr1 (40-91)||(29229460-29229512)
chr1 (49-85)||(31015051-31015087)
chr1 (49-85)||(37055871-37055907)
[»] chr7 (42 HSPs)
chr7 (41-113)||(29787356-29787428)
chr7 (49-119)||(15902830-15902902)
chr7 (41-119)||(32308120-32308200)
chr7 (41-89)||(27093424-27093472)
chr7 (41-89)||(27184829-27184877)
chr7 (40-91)||(8160415-8160466)
chr7 (40-115)||(11700802-11700877)
chr7 (44-91)||(17851434-17851481)
chr7 (41-91)||(1433454-1433504)
chr7 (41-91)||(2948683-2948733)
chr7 (47-102)||(5233635-5233692)
chr7 (55-91)||(18213042-18213078)
chr7 (39-91)||(27732248-27732300)
chr7 (49-91)||(3721101-3721143)
chr7 (49-91)||(7328700-7328742)
chr7 (49-91)||(16341504-16341546)
chr7 (41-91)||(20549791-20549841)
chr7 (41-91)||(22602719-22602769)
chr7 (41-91)||(33384591-33384641)
chr7 (41-125)||(49088810-49088892)
chr7 (41-123)||(26329357-26329441)
chr7 (43-91)||(2425742-2425790)
chr7 (49-122)||(6630888-6630963)
chr7 (39-91)||(42720899-42720951)
chr7 (41-88)||(5235986-5236033)
chr7 (49-121)||(24339650-24339724)
chr7 (48-91)||(38143230-38143273)
chr7 (41-91)||(5548676-5548726)
chr7 (49-91)||(12278843-12278885)
chr7 (41-91)||(19206050-19206100)
chr7 (41-91)||(22484025-22484075)
chr7 (49-91)||(22868050-22868092)
chr7 (49-91)||(24146824-24146866)
chr7 (41-107)||(30731037-30731103)
chr7 (49-86)||(2424622-2424659)
chr7 (48-85)||(9408349-9408386)
chr7 (41-90)||(23191896-23191945)
chr7 (51-88)||(35493423-35493460)
chr7 (55-88)||(39138458-39138491)
chr7 (51-91)||(9482944-9482984)
chr7 (41-89)||(10377507-10377555)
chr7 (61-89)||(41020516-41020544)
[»] chr6 (51 HSPs)
chr6 (41-91)||(5732519-5732569)
chr6 (25-123)||(25038046-25038145)
chr6 (49-91)||(7086803-7086845)
chr6 (41-91)||(19040352-19040402)
chr6 (42-96)||(31579229-31579283)
chr6 (41-119)||(5970087-5970167)
chr6 (42-91)||(7265602-7265651)
chr6 (49-102)||(8805570-8805623)
chr6 (49-123)||(16766705-16766781)
chr6 (40-88)||(5462685-5462733)
chr6 (41-88)||(9658879-9658926)
chr6 (55-123)||(16488565-16488635)
chr6 (40-87)||(32511679-32511726)
chr6 (49-91)||(9025503-9025545)
chr6 (49-91)||(9195763-9195805)
chr6 (41-91)||(10842532-10842582)
chr6 (41-91)||(10888983-10889033)
chr6 (49-91)||(17302355-17302397)
chr6 (41-87)||(17341677-17341723)
chr6 (49-123)||(7248366-7248442)
chr6 (42-91)||(30866153-30866202)
chr6 (42-91)||(32298616-32298665)
chr6 (47-127)||(4118304-4118386)
chr6 (44-91)||(9617437-9617484)
chr6 (42-92)||(1532241-1532291)
chr6 (49-91)||(7151420-7151462)
chr6 (41-91)||(7377979-7378029)
chr6 (41-119)||(8713979-8714060)
chr6 (41-91)||(9027178-9027228)
chr6 (41-91)||(9629383-9629433)
chr6 (53-91)||(11591879-11591917)
chr6 (52-90)||(13360382-13360420)
chr6 (41-91)||(13851736-13851786)
chr6 (49-163)||(17435207-17435324)
chr6 (49-91)||(24832596-24832638)
chr6 (49-91)||(26178690-26178732)
chr6 (53-91)||(26562701-26562739)
chr6 (46-88)||(32248937-32248979)
chr6 (40-90)||(32320679-32320729)
chr6 (42-84)||(34447374-34447416)
chr6 (49-107)||(9522899-9522959)
chr6 (49-90)||(24833243-24833284)
chr6 (49-107)||(34073338-34073398)
chr6 (41-89)||(677837-677885)
chr6 (49-89)||(7996389-7996429)
chr6 (49-89)||(8022372-8022412)
chr6 (39-91)||(14721239-14721291)
chr6 (59-91)||(17327664-17327696)
chr6 (49-85)||(17841604-17841640)
chr6 (39-91)||(21885790-21885842)
chr6 (49-85)||(25096431-25096467)
[»] chr4 (33 HSPs)
chr4 (41-91)||(22440609-22440659)
chr4 (43-90)||(903924-903971)
chr4 (41-91)||(5775367-5775417)
chr4 (51-91)||(13134460-13134500)
chr4 (41-88)||(21539879-21539926)
chr4 (41-87)||(8423731-8423777)
chr4 (41-91)||(11931280-11931330)
chr4 (49-91)||(36635332-36635374)
chr4 (41-91)||(40613450-40613500)
chr4 (41-91)||(40742591-40742641)
chr4 (49-89)||(7214533-7214573)
chr4 (59-91)||(10499279-10499311)
chr4 (52-91)||(17876166-17876205)
chr4 (43-123)||(30982853-30982935)
chr4 (41-121)||(38148702-38148784)
chr4 (55-123)||(46083966-46084036)
chr4 (49-91)||(999357-999399)
chr4 (46-88)||(3731208-3731250)
chr4 (49-83)||(17446079-17446113)
chr4 (61-120)||(19500836-19500897)
chr4 (49-91)||(33950144-33950186)
chr4 (39-89)||(40179647-40179697)
chr4 (41-91)||(48139264-48139314)
chr4 (49-103)||(49652969-49653023)
chr4 (48-85)||(6485626-6485663)
chr4 (42-91)||(16189710-16189759)
chr4 (54-91)||(17344513-17344550)
chr4 (61-123)||(22234865-22234929)
chr4 (48-85)||(27706192-27706229)
chr4 (46-91)||(44081586-44081631)
chr4 (41-114)||(7012066-7012141)
chr4 (50-90)||(9996849-9996889)
chr4 (51-91)||(18576046-18576086)
[»] chr5 (35 HSPs)
chr5 (41-123)||(3966503-3966587)
chr5 (41-123)||(18592073-18592157)
chr5 (41-91)||(27144463-27144513)
chr5 (41-123)||(11685939-11686022)
chr5 (42-91)||(36838544-36838593)
chr5 (40-92)||(24273038-24273090)
chr5 (40-92)||(24389124-24389176)
chr5 (49-89)||(35017045-35017085)
chr5 (40-91)||(6471898-6471949)
chr5 (55-123)||(21814275-21814345)
chr5 (41-91)||(7175028-7175078)
chr5 (49-91)||(16203804-16203846)
chr5 (41-87)||(28588687-28588733)
chr5 (41-90)||(2577190-2577239)
chr5 (49-123)||(21522758-21522834)
chr5 (49-123)||(21533324-21533400)
chr5 (42-91)||(30502397-30502446)
chr5 (42-91)||(30542740-30542789)
chr5 (51-91)||(14873527-14873567)
chr5 (55-91)||(39758286-39758322)
chr5 (55-123)||(6401512-6401582)
chr5 (49-88)||(12927662-12927701)
chr5 (40-87)||(23016002-23016049)
chr5 (44-87)||(30098329-30098372)
chr5 (49-91)||(23012417-23012459)
chr5 (41-91)||(23220983-23221033)
chr5 (46-88)||(28262408-28262450)
chr5 (41-104)||(38749557-38749622)
chr5 (49-91)||(41091266-41091308)
chr5 (39-88)||(17593734-17593783)
chr5 (49-85)||(14674277-14674313)
chr5 (51-91)||(18421850-18421890)
chr5 (47-91)||(19429438-19429482)
chr5 (49-85)||(19579709-19579745)
chr5 (49-85)||(33178033-33178069)
[»] scaffold1528 (1 HSPs)
scaffold1528 (41-118)||(1035-1114)
[»] scaffold0236 (1 HSPs)
scaffold0236 (39-87)||(25781-25829)
[»] scaffold0110 (1 HSPs)
scaffold0110 (41-102)||(28850-28913)
[»] scaffold0022 (2 HSPs)
scaffold0022 (41-91)||(99893-99943)
scaffold0022 (42-88)||(90844-90890)
[»] scaffold0044 (1 HSPs)
scaffold0044 (50-123)||(53189-53264)
[»] scaffold0024 (1 HSPs)
scaffold0024 (43-87)||(68255-68299)
[»] scaffold0008 (1 HSPs)
scaffold0008 (49-129)||(263341-263423)
[»] scaffold0697 (1 HSPs)
scaffold0697 (41-87)||(1644-1690)
[»] scaffold0036 (1 HSPs)
scaffold0036 (49-91)||(9756-9798)
[»] scaffold0020 (1 HSPs)
scaffold0020 (49-91)||(135321-135363)
[»] scaffold0003 (1 HSPs)
scaffold0003 (61-123)||(241614-241678)
[»] scaffold0136 (1 HSPs)
scaffold0136 (41-85)||(3864-3908)
[»] scaffold0027 (1 HSPs)
scaffold0027 (41-85)||(46682-46726)
[»] scaffold0018 (1 HSPs)
scaffold0018 (41-85)||(192264-192308)
[»] scaffold0011 (1 HSPs)
scaffold0011 (49-85)||(17764-17800)


Alignment Details
Target: chr2 (Bit Score: 138; Significance: 4e-72; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 2665963 - 2665790
Alignment:
Q  25 agatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgtt 124  Q
    ||||| |||||||| | |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2665963 agatagtgacatgtctaacaccactaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttgaacacaacacgtgtt 2665864  T
Q  125 tgataatgatgcacgtctaatccgaaaagtgccgtacttggtagttatcgacatacaatgattattataaaact 198  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||    
T  2665863 tgataatgatgcacgtctaatccgaaaagtgtcgtacttcgtagttatcgacgtacaatgattattataaaact 2665790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 44860319 - 44860404
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    |||||||| ||||||||| |||||||| ||||||| ||||||||||||||||  ||||| |||| |||||||||||| ||| ||||    
T  44860319 tgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgt 44860404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 34785027 - 34784961
Alignment:
Q  55 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacac 119  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||||||| | |||||| ||||    
T  34785027 ttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacac 34784961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 21616762 - 21616812
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  21616762 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 21616812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 36281688 - 36281734
Alignment:
Q  44 accgttaataattttagaaaatcacataatttagtgtaattatatgt 90  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  36281688 accgttaataatttgagaaaatcacataatttagtgtaatcatatgt 36281734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 2331795 - 2331876
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||| |||||||||| |||||||||||||||| |||||| |||| ||| ||||| ||||| |||| || |||| |||||||    
T  2331795 acaccattaataatttgagaaaatcacataattcagtgtatttatgtgtcggtgtcgtgtcagtgtcgggcacagcacgtgt 2331876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 30527653 - 30527604
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  30527653 acactgttaataatttgagaaaatcatataatttagtgtaattatatgtg 30527604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 20922973 - 20922937
Alignment:
Q  55 ttttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||||||||||||||||||||||||||||    
T  20922973 ttttagaaaatcacataatttagtgtaattatatgtg 20922937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 28524447 - 28524510
Alignment:
Q  62 aaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||||||| ||||||||||||||||  | |||||||| ||||| |||||||||||||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacacaacacgtgt 28524510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 22084890 - 22084805
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaa--ttatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    |||||||||||||||| ||||||||| |||||| |||||||  |||||||||  ||| | ||||| |||| |||||||||||||||    
T  22084890 acaccgttaataatttgagaaaatcatataattcagtgtaattttatatgtgccggtatcgtgtcagtgtcggacacaacacgtgt 22084805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 23718026 - 23718076
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| ||||| |||||||||| ||||||||||||||||    
T  23718026 gacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 23718076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 24105698 - 24105748
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| ||||| |||||||||| ||||||||||||||||    
T  24105698 gacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 24105748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 31808077 - 31808127
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| | |||||||||||||| ||||||||||||||||    
T  31808077 gacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtg 31808127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 37411303 - 37411253
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| |||||||||||||||| ||||| ||||||||||    
T  37411303 gacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtg 37411253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 4207856 - 4207941
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattata-tgtgggtgttgtgtcggtgttggacacaacacgtgtt 124  Q
    |||||||  ||||||||| | |||| | |||||||||||||||||||| ||| ||| | |||||||||| |||||| |||||||||    
T  4207856 tgacaccactaataatttgaaaaaagcgcataatttagtgtaattatattgtcggtatcgtgtcggtgtcggacacgacacgtgtt 4207941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 28412351 - 28412404
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtg 95  Q
    |||||||||||||||| | |||||||||||||| ||||||||||| ||| ||||    
T  28412351 acaccgttaataatttgataaaatcacataattcagtgtaattatgtgtcggtg 28412404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 28677909 - 28677958
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 90  Q
    ||||||| ||||||||| | |||||||||||||| |||||||||||||||    
T  28677909 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 31018591 - 31018636
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    |||||| ||||||||| |||||||||||| ||||||||||||||||    
T  31018591 acaccgctaataatttcagaaaatcacatgatttagtgtaattata 31018636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 35449514 - 35449563
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||| ||||||||||| ||||||||||| |||| ||||||||||||||||    
T  35449514 acactgttaataatttgagaaaatcacagaattcagtgtaattatatgtg 35449563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 39279676 - 39279725
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||||| | ||||||||| |||||| ||||||||||||||||    
T  39279676 acaccgttaataatatgagaaaatcaaataattcagtgtaattatatgtg 39279725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 20242772 - 20242736
Alignment:
Q  55 ttttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||||||||||| ||||||||||||||||    
T  20242772 ttttagaaaatcacataattcagtgtaattatatgtg 20242736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 19573978 - 19574029
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 92  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||||||| ||||    
T  19573978 gacaccgataataatttaagaaaataacataattcagtgtaattataggtgg 19574029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 23921256 - 23921299
Alignment:
Q  44 accgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    |||||||||||||| ||||||| |||||||| ||||||||||||    
T  23921256 accgttaataatttgagaaaattacataattcagtgtaattata 23921299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 35056886 - 35056952
Alignment:
Q  59 agaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    |||||| || |||||| ||||||||||||||||  ||||| |||||||||| |||||| ||||||||    
T  35056886 agaaaaccatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 35056952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 36409686 - 36409631
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgt 96  Q
    ||||||| | ||||||| | |||||||||||||||||||||||||| ||| |||||    
T  36409686 gacaccgctgataatttgaaaaaatcacataatttagtgtaattatgtgtcggtgt 36409631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 5367200 - 5367242
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtg 5367242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 16069313 - 16069263
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||||||||||| | ||||||| |||||| ||||||||||| ||||    
T  16069313 gacaccgttaataatttaaaaaaatcatataattcagtgtaattatttgtg 16069263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 18276521 - 18276571
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| |||||||||| ||||| ||||||||||| ||||    
T  18276521 gacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtg 18276571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 35191633 - 35191591
Alignment:
Q  46 cgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  35191633 cgttgataatttgagaaaatcacataatttagggtaattatat 35191591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 21782869 - 21782832
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattat 86  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  21782869 taataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 30404909 - 30404865
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  30404909 gacacggttaataatttgaaaaaatcacataattcagtgtaatta 30404865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 38355933 - 38355862
Alignment:
Q  54 attttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    |||| |||||||||||||||| ||||| ||||||||||  |||||  | | ||||||||| |||||||||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggatacaacacgtgt 38355862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 40361806 - 40361766
Alignment:
Q  48 ttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    |||||||||| | ||||| ||||||||||||||||||||||    
T  40361806 ttaataatttgaaaaaattacataatttagtgtaattatat 40361766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 44585 - 44500
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||||||||  ||| | ||||||||||||||||||||||||||    
T  44585 tgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgt 44500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 9e-18; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 11803258 - 11803331
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttgga 111  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||||||||||  |||||||||| |||||||||    
T  11803258 tgacactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgttgga 11803331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 39954338 - 39954288
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  39954338 gacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 4786397 - 4786347
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  4786397 gacaccattaataatttaagaaaatcacataattcagtgtaattatatgtg 4786347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 14731720 - 14731762
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  14731720 taataatttgagaaaatcacataatttagtgtaattatatgtg 14731762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 34897085 - 34897135
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  34897085 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 34897135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 33405437 - 33405393
Alignment:
Q  47 gttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||    
T  33405437 gttaataatttgagaaaaacacataatttagtgtaattatatgtg 33405393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 11927145 - 11927095
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||||||||    
T  11927145 gacactgttaataatttgataaaatcacataattcagtgtaattatatgtg 11927095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 13844647 - 13844605
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  13844647 taataatttgagaaaatcacataattgagtgtaattatatgtg 13844605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 15816180 - 15816107
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacg 120  Q
    ||||||||| | |||||||||||||||||||||||||||  ||| ||||| |||| ||||| |||||| |||||    
T  15816180 taataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacg 15816107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 24362261 - 24362211
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| ||| |||||||||||| ||||||||||||||||    
T  24362261 gacaccgctaataatttgagagaatcacataattcagtgtaattatatgtg 24362211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 2572107 - 2572031
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||| | ||||||||||||||||||||||||| |  ||| ||||| ||||| |||| |||||| ||||||||    
T  2572107 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgtgt 2572031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 4611534 - 4611583
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 90  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||||||||||    
T  4611534 gacaccgctaataatttgagaaaataacataattcagtgtaattatatgt 4611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 13018284 - 13018329
Alignment:
Q  44 accgttaataattttagaaaatcacataatttagtgtaattatatg 89  Q
    |||||||||||||| | ||||||||||||||||||||||| |||||    
T  13018284 accgttaataatttgacaaaatcacataatttagtgtaatgatatg 13018329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 20785523 - 20785474
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| ||||||||| || ||||||||||||||| ||||||||||||||    
T  20785523 acaccgctaataatttgaggaaatcacataatttaatgtaattatatgtg 20785474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 29776044 - 29776113
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaaca 118  Q
    ||||||||| |||||||||| ||||| ||| ||||||||||| ||||||  ||| |||| ||||||||||    
T  29776044 taataatttgagaaaatcacgtaattcagtataattatatgtcggtgttaagtcagtgtcggacacaaca 29776113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 12570569 - 12570517
Alignment:
Q  39 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| | ||||||||| |||||| ||||||||| ||||||||||||||||    
T  12570569 ttgacactgctaataatttaagaaaaacacataattaagtgtaattatatgtg 12570517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 31580180 - 31580140
Alignment:
Q  47 gttaataattttagaaaatcacataatttagtgtaattata 87  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  31580180 gttaataatttaagaaaatcacataattgagtgtaattata 31580140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 14134707 - 14134746
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatat 88  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaattatat 14134746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 3025559 - 3025597
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata 87  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattata 3025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 7472586 - 7472524
Alignment:
Q  29 actgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||| || ||||||  ||||||||| |  ||||||||||| ||||||||||||||||||    
T  7472586 actgacatattcgacaccactaataatttaaagaaatcacataaattagtgtaattatatgtg 7472524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 11944665 - 11944715
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||| ||||||||||| | |||||||||||| | ||||||||||||||||    
T  11944665 gacactgttaataatttgataaaatcacataactcagtgtaattatatgtg 11944715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 24447034 - 24447076
Alignment:
Q  46 cgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  24447034 cgttgataatttgagaaaatcacataatttagggtaattatat 24447076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 27213555 - 27213597
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| |||||||||||||||| | ||||||||||||||    
T  27213555 taataatttcagaaaatcacataattcactgtaattatatgtg 27213597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 31236628 - 31236586
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| |||||||||||||||| | ||||||||||||||    
T  31236628 taataatttgagaaaatcacataattcaatgtaattatatgtg 31236586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 34222955 - 34222997
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| | |||||||||||||| ||||||||||||||||    
T  34222955 taataatttaataaaatcacataattaagtgtaattatatgtg 34222997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 12570795 - 12570746
Alignment:
Q  39 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    ||||||||| ||||||||| |||||| | ||||||| |||||||||||||    
T  12570795 ttgacaccgctaataatttaagaaaaacgcataattaagtgtaattatat 12570746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 24669432 - 24669477
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaatta 85  Q
    |||||||||||||||||| || |||| |||||||| ||||||||||    
T  24669432 tgacaccgttaataatttgaggaaattacataattcagtgtaatta 24669477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 26529751 - 26529788
Alignment:
Q  51 ataattttagaaaatcacataatttagtgtaattatat 88  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  26529751 ataatttgagaaaatcacataatttagggtaattatat 26529788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 26902217 - 26902184
Alignment:
Q  58 tagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||||||||||| ||||||||||||||||    
T  26902217 tagaaaatcacataattcagtgtaattatatgtg 26902184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 33382077 - 33382028
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| ||||||||| ||||||| |||||||| || |||||||||||||    
T  33382077 acaccgataataatttaagaaaatgacataattcagagtaattatatgtg 33382028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 37283867 - 37283814
Alignment:
Q  43 caccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgt 96  Q
    ||||| ||||||| | |||||||||||||||| ||||||||||| ||| |||||    
T  37283867 caccgctaataatctgagaaaatcacataattcagtgtaattatgtgtcggtgt 37283814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 4298945 - 4298901
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||| ||||||||||| | |||||||||||||||| ||||||||    
T  4298945 gacacagttaataatttgaaaaaatcacataatttaatgtaatta 4298901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 8342980 - 8343016
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||||| | |||||||||||||||||||||||||    
T  8342980 taataatttgaaaaaatcacataatttagtgtaatta 8343016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 8343324 - 8343360
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||||| | |||||||||||||||||||||||||    
T  8343324 taataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 18067994 - 18067954
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgt 80  Q
    |||||||| ||||||||| |||||||||||||||| |||||    
T  18067994 tgacaccgctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 18964191 - 18964227
Alignment:
Q  55 ttttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||||||||||| | ||||||||||||||    
T  18964191 ttttagaaaatcacataattcaatgtaattatatgtg 18964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 20873077 - 20873113
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||||| | |||||||||||||||||||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaatta 20873113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 22493504 - 22493555
Alignment:
Q  51 ataattttagaaaatcacataatttagtgtaat--tatatgtgggtgttgtg 100  Q
    ||||||||| |||||||||||||| ||||||||  ||||||| |||||||||    
T  22493504 ataattttaaaaaatcacataattcagtgtaatcatatatgtcggtgttgtg 22493555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 9e-18; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 32804599 - 32804549
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32804599 gacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtg 32804549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 49505210 - 49505163
Alignment:
Q  44 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  49505210 accgctaataatttgagaaaatcacataatttagtgtaattatatgtg 49505163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 11313851 - 11313809
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  11313851 taataatttgagaaaatcacataatttagtgtaattatatgtg 11313809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 16192809 - 16192759
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||||||||||    
T  16192809 gacaccgttaataatttgagaaaataacataattcagtgtaattatatgtg 16192759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 25064909 - 25064991
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||| |||| |||| | |||||||||||||||||||||||||| ||| ||| | |||| ||||| |||||| ||||||||    
T  25064909 gacaccgctaatgatttgaaaaaatcacataatttagtgtaattatgtgttggtatcgtgttggtgtcggacacgacacgtgt 25064991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 55212963 - 55213046
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||| |  ||| |||| ||||||||||| || ||||||||||||    
T  55212963 gacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcggtg-tgtgtcggtgtcgggcacaacacgtgt 55213046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 15812871 - 15812799
Alignment:
Q  50 aataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtg 122  Q
    |||||||| |||||||||||||| | ||||||||||||||  ||||| |||| ||||| |||||| |||||||    
T  15812871 aataatttgagaaaatcacataactcagtgtaattatatgccggtgtcgtgttggtgtcggacacgacacgtg 15812799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 2731819 - 2731881
Alignment:
Q  48 ttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgtt 108  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||   ||||||||||||||||    
T  2731819 ttaatactttaagaaaatcacataattaagtgtaattatatgtgtatgtgttgtgtcggtgtt 2731881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 11665952 - 11666034
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgtttgata 129  Q
    ||||||||| | ||||||||| |||||||||||||||||||||  ||||| |||| | |||| ||||| |||||||| |||||    
T  11665952 taataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctgata 11666034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 4201397 - 4201443
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||    
T  4201397 acaccgttaataatttgaaaaaatcacataattaagtgtaattatat 4201443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 7928450 - 7928500
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| | |||||||||||||| ||||||||||||||||    
T  7928450 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtg 7928500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 8039893 - 8039820
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggaca 113  Q
    |||||| ||||||||| ||||||| | |||||| ||||||||||||||||  ||||| |||||||||| |||||    
T  8039893 acaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 8039820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 34307840 - 34307737
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgtttgataatgatgcacg 139  Q
    |||||||| ||||||||| ||||||||||||| || ||||||||||||     |||| |||||||||| |||||| |||||| || |||| |||  ||||    
T  34307840 tgacaccgctaataatttgagaaaatcacatatttcagtgtaattata----agtgtcgtgtcggtgtcggacacgacacgtcttcgatactgagacacg 34307745  T
Q  140 tctaatcc 147  Q
     |||||||    
T  34307744 cctaatcc 34307737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 4987342 - 4987266
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| ||||  ||||||||||||||||| ||||||||    
T  4987342 taataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgt 4987266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 14209121 - 14209197
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||||| |||||||||||||| |||||||||| |  |||  |||| |||||||||| |||||| ||||||||    
T  14209121 taataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgt 14209197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 14840349 - 14840304
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||||    
T  14840349 acaccattaataatttcagaaaatcacataattcagtgtaattata 14840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 15796353 - 15796269
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||| ||||||||||| | ||||||| |||||| |||||||||| |  ||| ||||| |||| ||||| |||||||||||||||    
T  15796353 gacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgt 15796269  T

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Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 27277889 - 27277852
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattat 86  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  27277889 taataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 10268545 - 10268501
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||| ||||||||||| | |||||||||||||||||||||||||    
T  10268545 gacacagttaataatttgaaaaaatcacataatttagtgtaatta 10268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 7614474 - 7614427
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    ||||| ||||||||||| |||||||||||||||| ||| |||||||||    
T  7614474 gacacagttaataatttaagaaaatcacataattcagtataattatat 7614427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 8842330 - 8842376
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    ||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  8842330 gacaccgctaataatttt-gaaaatcacataatttggtgtaattatat 8842376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 10690321 - 10690274
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    ||||||| ||||||| | |||||||||||||||| |||||||||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaattatat 10690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 11251986 - 11252033
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtgggtgt 96  Q
    ||||||||| |||||||||||||||| ||||||||||| ||| |||||    
T  11251986 taataatttgagaaaatcacataattcagtgtaattatgtgtcggtgt 11252033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 15314924 - 15314885
Alignment:
Q  52 taattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  15314924 taatttgaaaaaatcacataatttagtgtaattatatgtg 15314885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 38731221 - 38731268
Alignment:
Q  44 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||| ||||||||||| |||||||||||||| |||||| |||||||||    
T  38731221 accgctaataattttaaaaaatcacataattcagtgtagttatatgtg 38731268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 2620104 - 2620034
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacac 119  Q
    |||| |||| |||||||||||||||| ||||||| ||| ||| ||||| ||| ||||||| ||||| ||||    
T  2620104 taatcatttgagaaaatcacataattaagtgtaactatgtgttggtgtcgtggcggtgttagacacgacac 2620034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 8383257 - 8383303
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    ||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  8383257 gacaccgctaataatttgagaaaatcatataattcagtgtaattata 8383303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 25093502 - 25093552
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||| |||||| |||| ||||||||||| |||| ||||||||||||||||    
T  25093502 gacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtg 25093552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 28098143 - 28098181
Alignment:
Q  46 cgttaataattttagaaaatcacataatttagtgtaatt 84  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  28098143 cgttgataattttagaaaatcacataatttagggtaatt 28098181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 48202320 - 48202278
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||    
T  48202320 taatagtttgagaaaatcacataatttaatgtaattatatgtg 48202278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 1509538 - 1509583
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaatta 85  Q
    |||||| | ||||||||| | |||||||||||||||||||||||||    
T  1509538 tgacacagctaataatttgaaaaaatcacataatttagtgtaatta 1509583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 9624640 - 9624689
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatg 89  Q
    |||||| | ||||||||| |||||||||||||||| | ||||||||||||    
T  9624640 tgacactgctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 11658820 - 11658865
Alignment:
Q  46 cgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||| |||||||| ||||||| ||||| ||||||||||    
T  11658820 cgttaataatttgagaaaatcgcataattcagtgtgattatatgtg 11658865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 12704015 - 12704056
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgt 90  Q
    ||||||||| |||||| ||||||||| |||||||||||||||    
T  12704015 taataatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 17005670 - 17005594
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||| | ||||||| |||||| ||||||||||||  ||| |||||||||| |||||  |||| |||||||||    
T  17005670 taataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgt 17005594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 8789599 - 8789559
Alignment:
Q  51 ataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||||||||||  |||||||||||||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtg 8789559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 11493412 - 11493372
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatg 89  Q
    ||||||| | |||||||||||||||| ||||||||||||||    
T  11493412 taataatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 35222952 - 35222988
Alignment:
Q  55 ttttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||||||||||| | ||||||||||||||    
T  35222952 ttttagaaaatcacataattcaatgtaattatatgtg 35222988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 55401083 - 55401119
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||||| | |||||||||||||||||||||||||    
T  55401083 taataatttgaaaaaatcacataatttagtgtaatta 55401119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 12713378 - 12713302
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatg--tgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||| |||||||||||||||||||||||||||||||  | |||||| ||||||||| | |||||||||||||    
T  12713378 taataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12713302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 12717469 - 12717393
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatg--tgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||| |||||||||||||||||||||||||||||||  | |||||| ||||||||| | |||||||||||||    
T  12717469 taataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12717393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 39953205 - 39953155
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  39953205 gacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtg 39953155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 34257969 - 34257922
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  34257969 gacaccgttaataatttaataaaatcacataatttagtgtaattatat 34257922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 44482240 - 44482310
Alignment:
Q  51 ataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacac 119  Q
    ||||||| |||||||||||||||| ||||||||||||||||  ||||| |||||||||| |||||| ||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacac 44482310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 1864939 - 1864889
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  1864939 gacacagttaataatttgagaaaatcacataattcagtgtaattatatgtg 1864889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 12707924 - 12707848
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatg--tgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||| ||||||||| ||||||||||| |||||||||  | |||||| ||||||||| | |||||||||||||    
T  12707924 taataatttaagaaaatcatataatttagtgcaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12707848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 14332693 - 14332652
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgt 90  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  14332693 taataatttgagaaaatcacataatttagtgtaattatatgt 14332652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 25272479 - 25272528
Alignment:
Q  38 tttgacaccgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  25272479 tttgacacagttaacaatttgagaaaatcacataatttagtgtaattata 25272528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 17754311 - 17754390
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg--gtgttgtgtcggtgttggacacaaca 118  Q
    ||||||| ||||||||| | ||||| |||||||| ||||||| ||||||||   |||| |||||||||||||||||||||    
T  17754311 gacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaaca 17754390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 91
Target Start/End: Complemental strand, 39130819 - 39130776
Alignment:
Q  48 ttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  39130819 ttaataattttagaaaattatataatttagtgtaattatatgtg 39130776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 2784556 - 2784606
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||||| ||||| |||||||||||||||| ||| ||||||||||||    
T  2784556 gacaccgttaaaaatttaagaaaatcacataattgagtataattatatgtg 2784606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 7918262 - 7918220
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattatatgtg 7918220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 13997883 - 13997933
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||| |||| | |||||||||||||| ||||||||||||||||    
T  13997883 gacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtg 13997933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 25098614 - 25098564
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| | ||||||| |||||||||||||||| ||||||||||||||||    
T  25098614 gacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtg 25098564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 25361896 - 25361961
Alignment:
Q  51 ataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacac 114  Q
    ||||||| |||||||||||||||| ||||||||||||||||   |||| |||||||||| ||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacac 25361961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 26238171 - 26238091
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||| |||||||   || |||||||||| |||||||||||||||    
T  26238171 gacaccgctaataatttgagaaaataacataattcagtgtaat-atatgtgtcagt-gtgtcggtgtcggacacaacacgtgt 26238091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 34371713 - 34371797
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    |||||||| ||||||||  |||||||||||||||| ||||||||||||||||  ||||| |||| ||||| ||| || ||||||||    
T  34371713 tgacaccgctaataattg-agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgacacgtgt 34371797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 34712434 - 34712392
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  34712434 taataatttgagaaaataacataatttagtgtaattatatgtg 34712392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 36878461 - 36878507
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  36878461 gacaccgctaataatttgagaaaatcacataattcagtgtaattata 36878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 6427351 - 6427400
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  6427351 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtg 6427400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 16164366 - 16164290
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||| | |||||||||||||||| ||||||||||||||    ||| |||| |||||||||| ||||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtcattgtcgtgttggtgttggacgcaacacgtgt 16164290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 40181879 - 40181920
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgt 90  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattatatgt 40181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 19324572 - 19324612
Alignment:
Q  51 ataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 30749854 - 30749890
Alignment:
Q  55 ttttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30749854 ttttagaaaatcacataattcagtgtaattatatgtg 30749890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 30771305 - 30771341
Alignment:
Q  55 ttttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30771305 ttttagaaaatcacataattcagtgtaattatatgtg 30771341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 41877529 - 41877485
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||    
T  41877529 gacaccgctaataatttgagaaaattacataatttagtgtaatta 41877485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 42004998 - 42004937
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacac 114  Q
    ||||||||| ||||||| ||||||||||||||||| |||    |||||||||||||||| ||||||    
T  42004998 taataatttgagaaaatgacataatttagtgtaatcata----ggtgttgtgtcggtgtcggacac 42004937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 48148112 - 48148049
Alignment:
Q  25 agatactgacatgtttgacaccgttaataattttagaaaa-tcacataatttagtgtaattatat 88  Q
    ||||||||||||||| ||||||| ||||||||||| |||| ||| |||||| |||||||||||||    
T  48148112 agatactgacatgtt-gacaccgctaataattttaaaaaaatcatataattcagtgtaattatat 48148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 36905998 - 36906072
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacac 114  Q
    |||||| ||||||| | |||||||||||||||| || |||||||||||||  || |||||||| |||| ||||||    
T  36905998 acaccgctaataatctgagaaaatcacataattcagagtaattatatgtgttggcgttgtgtcagtgtcggacac 36906072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 52903252 - 52903299
Alignment:
Q  44 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||||| | ||||||| |||||| ||||||||||||||||    
T  52903252 accgttaataatttaataaaatcatataattcagtgtaattatatgtg 52903299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 398824 - 398778
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    ||||||| ||||||||| | |||||||||||||| ||||||||||||    
T  398824 gacaccgctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 10233261 - 10233303
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| || |||||||||||||||| ||||||||||||||||    
T  10233261 taataaattgagaaaatcacataattcagtgtaattatatgtg 10233303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 12443511 - 12443469
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||    
T  12443511 taataatttgagaaaatcacataattcagtgtaattgtatgtg 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 13436466 - 13436508
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  13436466 taataatttaaggaaatcacataattcagtgtaattatatgtg 13436508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 17425152 - 17425102
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| | |||||||||||||| | ||||||||||||||    
T  17425152 gacaccgataataatttgataaaatcacataattcaatgtaattatatgtg 17425102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 17831590 - 17831540
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| |||||||||||| ||| |||||||| |||||||    
T  17831590 gacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtg 17831540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 20157409 - 20157359
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||| | |||||||||||||||| |||||||| |||||||    
T  20157409 gacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtg 20157359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 21530689 - 21530735
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    ||||||||||||||||| ||||||||| ||||||| || ||||||||    
T  21530689 gacaccgttaataatttgagaaaatcatataatttggtataattata 21530735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 28674801 - 28674847
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    |||||||||||||||| ||||||| |||||||| ||| |||||||||    
T  28674801 acaccgttaataatttgagaaaattacataattcagtataattatat 28674847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 32724157 - 32724107
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||| |||||||||||| ||||| | |||||||||| ||||||||||||||    
T  32724157 gacatcgttaataatttgagaaatttacataatttaatgtaattatatgtg 32724107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 34298444 - 34298482
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata 87  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  34298444 taataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 35999373 - 35999331
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||    
T  35999373 taataatttaagaaaatcatataatttagtataattatatgtg 35999331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 38503320 - 38503370
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| ||||||||| ||| || ||||||||||||||||    
T  38503320 gacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtg 38503370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 9709821 - 9709870
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| ||||||||| ||||||||||||||||   ||||||||||||||    
T  9709821 acaccgctaataatttgagaaaatcacataattcgttgtaattatatgtg 9709870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 9828052 - 9828128
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||| | |||||||||||||| ||||||||| ||||||  ||||| ||||| ||||  ||||| ||||||||    
T  9828052 taataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgt 9828128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 10572640 - 10572580
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgt 107  Q
    ||||||||| ||||||||||||||||  ||||||||| |||||  |||||||||| |||||    
T  10572640 taataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttgtgttggtgt 10572580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 15323169 - 15323206
Alignment:
Q  47 gttaataattttagaaaatcacataatttagtgtaatt 84  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  15323169 gttaataatttgaaaaaatcacataatttagtgtaatt 15323206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 20132024 - 20131987
Alignment:
Q  51 ataattttagaaaatcacataatttagtgtaattatat 88  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  20132024 ataatttgagaaaatcacataatttagggtaattatat 20131987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 32461514 - 32461439
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||| | |||||||||||||||| |||||||| |  ||| |||| ||||||||||| |||||| ||||||||    
T  32461514 taataatttgaaaaaatcacataatttaatgtaattacaagtgttggtg-tgtgtcggtgtcggacacgacacgtgt 32461439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 45534235 - 45534202
Alignment:
Q  55 ttttagaaaatcacataatttagtgtaattatat 88  Q
    |||||||||||||||||||||||||||| |||||    
T  45534235 ttttagaaaatcacataatttagtgtaagtatat 45534202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 47989505 - 47989577
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacac 119  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| ||||| |||||||||| |||||| ||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacac 47989577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 2896180 - 2896140
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgta 81  Q
    ||||||| ||||||||| |||||||||||||||| ||||||    
T  2896180 gacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 5898325 - 5898277
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 89  Q
    ||||||| ||||||| | | |||||||||||||| ||||||||||||||    
T  5898325 gacaccgctaataatctgaaaaaatcacataattcagtgtaattatatg 5898277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 22515938 - 22515902
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||||| | |||||||||||||||||||||||||    
T  22515938 taataatttgaaaaaatcacataatttagtgtaatta 22515902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 22881667 - 22881631
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||||| | |||||||||||||||||||||||||    
T  22881667 taataatttgaaaaaatcacataatttagtgtaatta 22881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 25934633 - 25934700
Alignment:
Q  58 tagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    |||||||||||| |||  ||||||||||||||||  ||| | |||||||||| |||||| ||||||||    
T  25934633 tagaaaatcacaaaatacagtgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgt 25934700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 29229460 - 29229512
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagt-gtaattatatgtg 91  Q
    |||||| | ||||||||| |||||||||||| ||||||| |||||||||||||    
T  29229460 tgacactgctaataatttgagaaaatcacatgatttagtggtaattatatgtg 29229512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 31015051 - 31015087
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  31015051 taataatttgagaaaatcacataattcagtgtaatta 31015087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 37055907 - 37055871
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  37055907 taataatttgagaaaattacataatttagtgtaatta 37055871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 29787428 - 29787356
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggaca 113  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||| ||| |||||  |||||||||||||||    
T  29787428 gacaccgctaataatttgagaaaatcacataattcagtgtaattatgtgttggtgtaatgtcggtgttggaca 29787356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 15902830 - 15902902
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacac 119  Q
    ||||||||| | |||||||||||||||||||||||||||||||  |||||||||||||| | |||||| ||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacacgacac 15902902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 32308120 - 32308200
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacac 119  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||| ||||||   |||| ||||||||||||||||| ||||    
T  32308120 gacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacac 32308200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 27093472 - 27093424
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 89  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27093472 gacaccgctaataatttaagaaaatcacataatttagtgtaattatatg 27093424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 27184829 - 27184877
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 89  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27184829 gacaccgctaataatttaagaaaatcacataatttagtgtaattatatg 27184877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 8160415 - 8160466
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  8160415 tgacaccgctaataatttaagaaaattacataatttagtgtaattatatgtg 8160466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 11700802 - 11700877
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacaca 115  Q
    |||||||||||||||||| | |||||||||||||| | ||||||||| |||  ||||||| ||||||| |||||||    
T  11700802 tgacaccgttaataatttgacaaaatcacataattcaatgtaattatgtgtctgtgttgtctcggtgtcggacaca 11700877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 17851434 - 17851481
Alignment:
Q  44 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  17851434 accgctaataattttagaaaatcacataattcagtgtaattatatgtg 17851481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 1433454 - 1433504
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  1433454 gacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtg 1433504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 2948683 - 2948733
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||    
T  2948683 gacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtg 2948733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 5233635 - 5233692
Alignment:
Q  47 gttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtc 102  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||  |||||||||||    
T  5233635 gttaataatttgagaaaatcacataatctagtgtaattatatgtgttggtgttgtgtc 5233692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 18213078 - 18213042
Alignment:
Q  55 ttttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||||||||||||||||||||||||||||    
T  18213078 ttttagaaaatcacataatttagtgtaattatatgtg 18213042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 27732300 - 27732248
Alignment:
Q  39 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| |||||||||||| ||||||| |||||||| ||||||||||||||||    
T  27732300 ttgacaacgttaataatttaagaaaattacataattcagtgtaattatatgtg 27732248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 3721101 - 3721143
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| |||||||||||||||||||| ||||||||||||    
T  3721101 taataatttgagaaaatcacataatttagtataattatatgtg 3721143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 7328742 - 7328700
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  7328742 taataatttgagaaaataacataatttagtgtaattatatgtg 7328700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 16341504 - 16341546
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtg 16341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 20549791 - 20549841
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| |||||||||| ||||| ||||||||||||||||    
T  20549791 gacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtg 20549841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 22602769 - 22602719
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||| ||| |||| |||||||||||||||| ||||||||||||||||    
T  22602769 gacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtg 22602719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 33384641 - 33384591
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||||||||| | ||||||||  |||||||||||||||||||||||    
T  33384641 gacaccgttaataatctgagaaaatcctataatttagtgtaattatatgtg 33384591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 49088810 - 49088892
Alignment:
Q  41 gacaccgttaataattttagaaaatcac--ataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgttt 125  Q
    ||||||||||||||||| | ||||||||  |||||||||| ||||||||||||    | |||| ||||||| |||||||||||||||    
T  49088810 gacaccgttaataatttaaaaaaatcacgtataatttagtataattatatgtg----tcgtgttggtgttgaacacaacacgtgttt 49088892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 26329441 - 26329357
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    |||| |||||||||||| |||||| |||| |||| ||||||||||||||||  || || ||||||||||  ||||| ||||||||    
T  26329441 gacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacgacacgtgt 26329357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 2425790 - 2425742
Alignment:
Q  43 caccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||||||||| |||||||||||||||| |||| || ||||||||    
T  2425790 caccgttaataatttgagaaaatcacataattaagtggaactatatgtg 2425742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 6630963 - 6630888
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtg 122  Q
    ||||||||| ||||| |||| ||||| ||||||||||||||||  | ||| |||| ||||| ||||||||||||||    
T  6630963 taataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtg 6630888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 42720951 - 42720899
Alignment:
Q  39 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| ||||||||| | |||||||||||||| | ||||||||||||||    
T  42720951 ttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtg 42720899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 5235986 - 5236033
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    ||||||| ||||||||| ||||||| | ||||||||||||||||||||    
T  5235986 gacaccgctaataatttaagaaaattatataatttagtgtaattatat 5236033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 24339650 - 24339724
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgt 121  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| ||||| |||||||||| |||||| ||||||    
T  24339650 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgt 24339724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 38143230 - 38143273
Alignment:
Q  48 ttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||| | |||||||||||||||| ||||||||||||||    
T  38143230 ttaataatttgaaaaaatcacataatttaatgtaattatatgtg 38143273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 5548676 - 5548726
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| | ||||||| ||||||||| |||||| ||||||||||||||||    
T  5548676 gacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtg 5548726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 12278843 - 12278885
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||    
T  12278843 taataatttaagaaaatgacataattcagtgtaattatatgtg 12278885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 19206050 - 19206100
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| |||||||||||||||| | | ||||||||||||    
T  19206050 gacaccgctaataatttgagaaaatcacataattcattataattatatgtg 19206100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 22484025 - 22484075
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| |||||||||||||||||  ||||||| ||| ||||||||||||    
T  22484025 gacaccgctaataattttagaaaattgcataattcagtataattatatgtg 22484075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 22868050 - 22868092
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| | |||||||||||||||| ||||||||||||||||    
T  22868050 taataatatgagaaaatcacataattcagtgtaattatatgtg 22868092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 24146824 - 24146866
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||||||||||||||||| | | ||||||||||||    
T  24146824 taataattttagaaaatcacataattcaatataattatatgtg 24146866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 30731037 - 30731103
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgt 107  Q
    |||||||  |||||||| |||||||||||||||| ||||||||| | ||| ||||| |||| |||||    
T  30731037 gacaccgcgaataatttgagaaaatcacataattcagtgtaattgtgtgtcggtgtcgtgttggtgt 30731103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 2424622 - 2424659
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattat 86  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  2424622 taataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 9408386 - 9408349
Alignment:
Q  48 ttaataattttagaaaatcacataatttagtgtaatta 85  Q
    |||||||||| | |||||||||||||||||||||||||    
T  9408386 ttaataatttgaaaaaatcacataatttagtgtaatta 9408349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 23191896 - 23191945
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 90  Q
    ||||||| ||||||||| ||||||||||||| || |||||||||| ||||    
T  23191896 gacaccgctaataatttgagaaaatcacatatttcagtgtaattacatgt 23191945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 35493423 - 35493460
Alignment:
Q  51 ataattttagaaaatcacataatttagtgtaattatat 88  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  35493423 ataatttgagaaaatcacataatttagggtaattatat 35493460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 88
Target Start/End: Original strand, 39138458 - 39138491
Alignment:
Q  55 ttttagaaaatcacataatttagtgtaattatat 88  Q
    |||||||||||||||||||| |||||||||||||    
T  39138458 ttttagaaaatcacataattcagtgtaattatat 39138491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 9482944 - 9482984
Alignment:
Q  51 ataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||||| |||| ||||||||||||||||    
T  9482944 ataatttgagaaaatcacacaattcagtgtaattatatgtg 9482984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 10377507 - 10377555
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 89  Q
    ||||| ||||||||| | ||||||||| |||||| ||||||||||||||    
T  10377507 gacactgttaataatataagaaaatcatataattcagtgtaattatatg 10377555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 89
Target Start/End: Original strand, 41020516 - 41020544
Alignment:
Q  61 aaaatcacataatttagtgtaattatatg 89  Q
    |||||||||||||||||||||||||||||    
T  41020516 aaaatcacataatttagtgtaattatatg 41020544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 5732569 - 5732519
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  5732569 gacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtg 5732519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 25038145 - 25038046
Alignment:
Q  25 agatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatt--atatgtgggtgttgtgtcggtgttggacacaacacgtg 122  Q
    ||||||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||||||  | |||| ||| |||||| |||||  ||||| |||||||    
T  25038145 agatactgacacgtt-gacaccgttaataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgtgttggtgtccgacacgacacgtg 25038047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 7086803 - 7086845
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  7086803 taataatttgagaaaatcacataatttagtgtaattatatgtg 7086845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 19040352 - 19040402
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  19040352 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 19040402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 31579283 - 31579229
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgt 96  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| ||| |||||    
T  31579283 acaccgttaataatttgagaaaatcacataattcagtgtaattatgtgtcggtgt 31579229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 5970167 - 5970087
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaatt--atatgtgggtgttgtgtcggtgttggacacaacac 119  Q
    ||||| ||||||||||| | |||||||||||||| |||||||||  | |||||||||| |||||||||| |||||| ||||    
T  5970167 gacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacac 5970087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 7265651 - 7265602
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  7265651 acaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 7265602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 8805623 - 8805570
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtc 102  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  8805623 taataatttgagaaaatcacataatttagtgtaattatgtgtcggtgtagtgtc 8805570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 16766705 - 16766781
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| ||||| |||||||||| |||||||||||||||    
T  16766705 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgt 16766781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 5462685 - 5462733
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||    
T  5462685 tgacaccgttaataatttgagaaaatcacataattcattgtaattatat 5462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 9658879 - 9658926
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||    
T  9658879 gacaccgctaataatttaagaaaatcacataattcagtgtaattatat 9658926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 16488635 - 16488565
Alignment:
Q  55 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||||||||| |||  ||||||||||||||||  ||||| |||||||||| |||||| ||||||||    
T  16488635 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 16488565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 32511726 - 32511679
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  32511726 tgacaccgctaataatttaagaaaatcacataattcagtgtaattata 32511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 9025545 - 9025503
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtg 9025503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 9195805 - 9195763
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  9195805 taataatttgagaaaatgacataatttagtgtaattatatgtg 9195763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 10842532 - 10842582
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| | ||||||||||||||||||||||| |||||||    
T  10842532 gacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtg 10842582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 10889033 - 10888983
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| | |||||||||||||||||||| ||||||||||    
T  10889033 gacaccgctaataatttgataaaatcacataatttagtgtgattatatgtg 10888983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 17302355 - 17302397
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| ||||||||||||||||| |||||||||||||||    
T  17302355 taataatttaagaaaatcacataattttgtgtaattatatgtg 17302397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 17341723 - 17341677
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||    
T  17341723 gacaccgttaataatttgataaaatcacataattcagtgtaattata 17341677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 7248366 - 7248442
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||| | || ||||||||||||| || |||||||||||||  || || ||||||||||||||||||||| ||||    
T  7248366 taataatctgaggaaatcacataattcagggtaattatatgtgttggagtcgtgtcggtgttggacacaacatgtgt 7248442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 30866202 - 30866153
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtg 30866153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 32298665 - 32298616
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| ||||||||| |||  ||||||||||||||||||||||||||||    
T  32298665 acaccgctaataatttaagatcatcacataatttagtgtaattatatgtg 32298616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 4118386 - 4118304
Alignment:
Q  47 gttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgtttga 127  Q
    ||||||||||| | |||||||||||||| | |||||||| |  ||| ||| ||||||| |||| |||||||| ||||||||||    
T  4118386 gttaataatttgaaaaaatcacataattaaatgtaattacaagtgttggttttgtgtcagtgtcggacacaatacgtgtttga 4118304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 9617437 - 9617484
Alignment:
Q  44 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  9617437 accggtaataatttgagaaaatcacataattcaatgtaattatatgtg 9617484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 1532241 - 1532291
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 92  Q
    |||||| ||||||||| | ||||| |||||||| |||||||||||||||||    
T  1532241 acaccgctaataatttgataaaattacataattcagtgtaattatatgtgg 1532291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 7151420 - 7151462
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| | |||||||||||||| ||||||||||||||||    
T  7151420 taataatttgaaaaaatcacataattaagtgtaattatatgtg 7151462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 7377979 - 7378029
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||| ||||| |||||||||||||||| | ||||||||||||||    
T  7377979 gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtg 7378029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 8713979 - 8714060
Alignment:
Q  41 gacaccgttaataattttagaaaa-tcacataatttagtgtaatt--atatgtgggtgttgtgtcggtgttggacacaacac 119  Q
    ||||| ||||||||||| | |||| |||||||||| |||||||||  | |||||||||| |||||||||| |||||| ||||    
T  8713979 gacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacac 8714060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 9027178 - 9027228
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| ||| ||||||||||||  |||||||||||||||    
T  9027178 gacaccgctaataatttgagataatcacataattccgtgtaattatatgtg 9027228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 9629383 - 9629433
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||  |||||||| |||||||||||||||| | ||||||||||||||    
T  9629383 gacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtg 9629433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 11591917 - 11591879
Alignment:
Q  53 aattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtg 11591879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 13360420 - 13360382
Alignment:
Q  52 taattttagaaaatcacataatttagtgtaattatatgt 90  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattatatgt 13360382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 13851736 - 13851786
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| ||||||| || ||||| ||||||||||||||||    
T  13851736 gacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtg 13851786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 17435207 - 17435324
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgtttgataatgatgcacgtctaatc 146  Q
    ||||||||||| ||||| |||||||| |||||||||| |  |||  ||||| ||||| ||| |||||| ||||||||| || | ||   |||||||||||    
T  17435207 taataattttaaaaaattacataattcagtgtaattacaagtgttagtgttttgtcgatgtcggacacgacacgtgttcgacactgggacacgtctaatc 17435306  T
Q  147 cgaaaagtg-ccgtactt 163  Q
     |||||||| ||||||||    
T  17435307 tgaaaagtgtccgtactt 17435324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 24832596 - 24832638
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| ||||||||  |||||||||||||||||||||||    
T  24832596 taataatttgagaaaatcttataatttagtgtaattatatgtg 24832638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 26178732 - 26178690
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| | ||||||||||||||||||||||| |||||||    
T  26178732 taataatttgataaaatcacataatttagtgtaatcatatgtg 26178690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 26562701 - 26562739
Alignment:
Q  53 aattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtg 26562739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 32248979 - 32248937
Alignment:
Q  46 cgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||    
T  32248979 cgttgataattttaaaaaatcacataatttagggtaattatat 32248937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 32320729 - 32320679
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 90  Q
    |||||||||||||||||| | |||||||||||||| | ||| |||||||||    
T  32320729 tgacaccgttaataatttgataaaatcacataattcaatgtcattatatgt 32320679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 34447416 - 34447374
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaatt 84  Q
    |||||||||||||||| | ||||||| ||||||||||||||||    
T  34447416 acaccgttaataatttgataaaatcatataatttagtgtaatt 34447374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 9522899 - 9522959
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgt 107  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| ||||||||||||||||    
T  9522899 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgt 9522959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 24833284 - 24833243
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgt 90  Q
    |||||| || |||||||| |||||||||||||||||||||||    
T  24833284 taataagttaagaaaatcgcataatttagtgtaattatatgt 24833243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 34073398 - 34073338
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatat--gtgggtgttgtgtcggtgt 107  Q
    ||||||||| |||||||| ||||||| |||||||||||||  || ||||| ||||||||||    
T  34073398 taataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcggtgt 34073338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 677837 - 677885
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 89  Q
    ||||| ||||||||||| ||||||||| ||||| ||||||| |||||||    
T  677837 gacactgttaataatttgagaaaatcatataatatagtgtatttatatg 677885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 7996429 - 7996389
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatg 89  Q
    ||||||||| ||||||||| |||||| ||||||||||||||    
T  7996429 taataatttgagaaaatcatataattcagtgtaattatatg 7996389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 8022372 - 8022412
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatg 89  Q
    ||||||||| ||||||||| |||||| ||||||||||||||    
T  8022372 taataatttgagaaaatcatataattcagtgtaattatatg 8022412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 14721239 - 14721291
Alignment:
Q  39 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||| |||||||||| ||||||| |||||||| | | ||||||||||||    
T  14721239 ttgacaccattaataatttaagaaaattacataattcactataattatatgtg 14721291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 91
Target Start/End: Complemental strand, 17327696 - 17327664
Alignment:
Q  59 agaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||||||||||||||| ||||||||    
T  17327696 agaaaatcacataatttagtgtaactatatgtg 17327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 17841640 - 17841604
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||||| | |||||||||||||||||||||||||    
T  17841640 taataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 21885790 - 21885842
Alignment:
Q  39 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| ||||||||| | ||||| |||||||||| | ||||||||||||    
T  21885790 ttgacaccgataataatttaaaaaaataacataatttaatctaattatatgtg 21885842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 25096431 - 25096467
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  25096431 taataatttgagaaaatcacataatctagtgtaatta 25096467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 22440659 - 22440609
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  22440659 gacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 903924 - 903971
Alignment:
Q  43 caccgttaataattttagaaaatcacataatttagtgtaattatatgt 90  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  903924 caccgttaataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 5775417 - 5775367
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  5775417 gacaccattaataatttgagaaaatcacataattaagtgtaattatatgtg 5775367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 13134460 - 13134500
Alignment:
Q  51 ataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  13134460 ataatttaagaaaatcacataatttagtgtaattatatgtg 13134500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 21539926 - 21539879
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    |||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  21539926 gacaccattaataatttaagaaaatcatataatttagtgtaattatat 21539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 8423777 - 8423731
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  8423777 gacaccgctaataatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 11931280 - 11931330
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||||||||| | | |||||||||||||||||||||| ||||||||    
T  11931280 gacaccgttaataatatgaaaaaatcacataatttagtgtaaatatatgtg 11931330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 36635332 - 36635374
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  36635332 taataatttgagaaaatcacataattcagtgtaattatatgtg 36635374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 40613450 - 40613500
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||| ||| |||||||||||||||| ||||||||||||||||    
T  40613450 gacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtg 40613500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 40742591 - 40742641
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| |||||||||| ||||||||| ||||| |||||||||||||||||    
T  40742591 gacaccattaataatttgagaaaatcatataatctagtgtaattatatgtg 40742641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 7214573 - 7214533
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatg 89  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  7214573 taataatttgagaaaatcacataatttaatgtaattatatg 7214533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 91
Target Start/End: Complemental strand, 10499311 - 10499279
Alignment:
Q  59 agaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||||||||||||||||||||||||    
T  10499311 agaaaatcacataatttagtgtaattatatgtg 10499279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 17876166 - 17876205
Alignment:
Q  52 taattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  17876166 taattttagaaaatgacataatttagtgtaatcatatgtg 17876205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 30982935 - 30982853
Alignment:
Q  43 caccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||| |||| |||| ||||||||||||| || ||||||||||||  ||| ||||| ||||||||||  ||||| ||||||||    
T  30982935 caccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgt 30982853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 38148784 - 38148702
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaa--ttatatgtgggtgttgtgtcggtgttggacacaacacgt 121  Q
    ||||||| ||||| ||| |||||||||||||||| |||||||  ||| |||| | ||| |||| |||||||||||| ||||||    
T  38148784 gacaccgctaatagtttgagaaaatcacataattcagtgtaattttaaatgtcgatgtcgtgttggtgttggacacgacacgt 38148702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 46084036 - 46083966
Alignment:
Q  55 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    |||||| |||||||||||| |||||||||||||||||  ||||| ||||| || | |||||| ||||||||    
T  46084036 ttttagtaaatcacataatctagtgtaattatatgtgtcggtgtcgtgtcagtatcggacacgacacgtgt 46083966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 999399 - 999357
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| || |||||| |||||||||||||||||||||||    
T  999399 taataatttgagtaaatcatataatttagtgtaattatatgtg 999357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 3731208 - 3731250
Alignment:
Q  46 cgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  3731208 cgttgataatttgagaaaatcacataatttagggtaattatat 3731250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 17446079 - 17446113
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaat 83  Q
    ||||||||| |||||||||||||||||||||||||    
T  17446079 taataatttaagaaaatcacataatttagtgtaat 17446113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 19500897 - 19500836
Alignment:
Q  61 aaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacg 120  Q
    |||| |||||| |||||||||||||||||||  ||||| |||||||||| |||||| |||||    
T  19500897 aaaaacacatattttagtgtaattatatgtgatggtgtcgtgtcggtgtcggacacgacacg 19500836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 33950144 - 33950186
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| |||||||||||||||||| |||||| |||||||    
T  33950144 taataatttgagaaaatcacataatttaatgtaatcatatgtg 33950186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 40179697 - 40179647
Alignment:
Q  39 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatg 89  Q
    |||||||| |||||| ||| | |||||||||||||| ||||||||||||||    
T  40179697 ttgacaccattaatagtttgaaaaaatcacataattcagtgtaattatatg 40179647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 48139264 - 48139314
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  48139264 gacactgttaataatttgagataatctcataatttaatgtaattatatgtg 48139314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 49653023 - 49652969
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcg 103  Q
    ||||||||| ||||||||| |||||| ||| ||||||||||| ||||| ||||||    
T  49653023 taataatttaagaaaatcagataattcagtataattatatgttggtgtcgtgtcg 49652969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 6485663 - 6485626
Alignment:
Q  48 ttaataattttagaaaatcacataatttagtgtaatta 85  Q
    |||||||||| | |||||||||||||||||||||||||    
T  6485663 ttaataatttgaaaaaatcacataatttagtgtaatta 6485626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 16189710 - 16189759
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| ||| ||||| |||||||||||||||| ||||||||||| ||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtg 16189759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 17344513 - 17344550
Alignment:
Q  54 attttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  17344513 atttaagaaaatcacataatttaatgtaattatatgtg 17344550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 22234929 - 22234865
Alignment:
Q  61 aaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    |||||||||||||| ||||||||| ||||||  ||||| ||||||||||  ||||| ||||||||    
T  22234929 aaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgt 22234865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 27706229 - 27706192
Alignment:
Q  48 ttaataattttagaaaatcacataatttagtgtaatta 85  Q
    |||||||||| | |||||||||||||||||||||||||    
T  27706229 ttaataatttaaaaaaatcacataatttagtgtaatta 27706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 44081631 - 44081586
Alignment:
Q  46 cgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||| | ||||||| |||||||| ||||||||||||||    
T  44081631 cgttaataatttgaaaaaatcatataatttaatgtaattatatgtg 44081586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 7012066 - 7012141
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacac 114  Q
    ||||||| ||||||||| ||||||| |||||||| ||||| || ||| ||   |||||||||||||||| ||||||    
T  7012066 gacaccgataataatttgagaaaatgacataattcagtgtgatcataggtatcggtgttgtgtcggtgtcggacac 7012141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 9996849 - 9996889
Alignment:
Q  50 aataattttagaaaatcacataatttagtgtaattatatgt 90  Q
    |||||||| |||||||||||||||| ||| |||||||||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgt 9996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 18576086 - 18576046
Alignment:
Q  51 ataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||||||||||  |||||||||||||||    
T  18576086 ataatttgagaaaatcacataattcggtgtaattatatgtg 18576046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 3966503 - 3966587
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||||||  ||||| ||||| |||| |||||||||| ||||    
T  3966503 gacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgt 3966587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 18592073 - 18592157
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||| ||||| ||| ||||||| |||||||| | ||||||||||||||  ||||| |||||||||| |||||||||||||||    
T  18592073 gacaccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgt 18592157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 27144463 - 27144513
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||||||||    
T  27144463 gacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtg 27144513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 11685939 - 11686022
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||| ||||||||| ||||| || ||||||||||||||||||||||||  ||||| || ||||||| |||||| ||||||||    
T  11685939 gacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacgacacgtgt 11686022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 36838544 - 36838593
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtg 36838593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 24273090 - 24273038
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 92  Q
    |||||| |||| |||||| |||||||||||||||| |||||||||||||||||    
T  24273090 tgacacagttattaatttgagaaaatcacataattcagtgtaattatatgtgg 24273038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 24389124 - 24389176
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 92  Q
    |||||| |||| |||||| |||||||||||||||| |||||||||||||||||    
T  24389124 tgacacagttattaatttgagaaaatcacataattcagtgtaattatatgtgg 24389176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 35017045 - 35017085
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatg 89  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  35017045 taataatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 6471949 - 6471898
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| | ||||||||| |||||||||||||||| ||||||||||||||||    
T  6471949 tgacacggctaataatttgagaaaatcacataattcagtgtaattatatgtg 6471898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 21814275 - 21814345
Alignment:
Q  55 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||||||||| |||  ||||||||||||||||  ||||| |||||||||| |||||| ||||||||    
T  21814275 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21814345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 7175078 - 7175028
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||||||||||| ||||||||||||||||| |  ||||||||||||    
T  7175078 gacaccgttaataatttgagaaaatcacataatttggcataattatatgtg 7175028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 16203846 - 16203804
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  16203846 taataatttgagaaaatctcataatttagtgtaattatatgtg 16203804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 28588733 - 28588687
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  28588733 gacaccggtaataatttgagaaaatcacataattcagtgtaattata 28588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 2577239 - 2577190
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 90  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||| ||||||    
T  2577239 gacaccgataataatttgagaaaatgacataatttagtgtaatcatatgt 2577190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 21522758 - 21522834
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||||| ||||| |||||||| |||||||||| |  ||| ||||| |||||||||| |||||| ||||||||    
T  21522758 taataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21522834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 21533324 - 21533400
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||||| ||||| |||||||| |||||||||| |  ||| ||||| |||||||||| |||||| ||||||||    
T  21533324 taataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21533400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 30502446 - 30502397
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| ||||||||| |||||||||| ||||| ||||||||||||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtg 30502397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 30542789 - 30542740
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||| ||||||||| |||||||||| ||||| ||||||||||||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtg 30542740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 14873527 - 14873567
Alignment:
Q  51 ataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtg 14873567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 39758286 - 39758322
Alignment:
Q  55 ttttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||||||||||||||||||| ||||||||||||||||    
T  39758286 ttttagaaaatcacataattcagtgtaattatatgtg 39758322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 6401512 - 6401582
Alignment:
Q  55 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||||||||| |||  ||||||||||||||||  ||||| ||||| |||| |||||| ||||||||    
T  6401512 ttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgt 6401582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 12927662 - 12927701
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatat 88  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  12927662 taataatttgagaaaatcatataatttagtgtaattatat 12927701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 23016049 - 23016002
Alignment:
Q  40 tgacaccgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    ||||| ||||||| |||| |||||||||||||||| ||||||||||||    
T  23016049 tgacatcgttaatcatttgagaaaatcacataattcagtgtaattata 23016002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 30098329 - 30098372
Alignment:
Q  44 accgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    |||||||||||||| |||||||||||||||| | ||||||||||    
T  30098329 accgttaataatttgagaaaatcacataattcaatgtaattata 30098372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 23012459 - 23012417
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||    
T  23012459 taataatttgagaaaatcatataatttaatgtaattatatgtg 23012417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 23220983 - 23221033
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||| | |||||||||||||||||||| || |||||||    
T  23220983 gacaccgctaataatttgataaaatcacataatttagtgttatcatatgtg 23221033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 28262450 - 28262408
Alignment:
Q  46 cgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  28262450 cgttgataatttgagaaaatcacataatttagggtaattatat 28262408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 38749622 - 38749557
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcgg 104  Q
    ||||||| ||||||||| | ||||| |||||||| | ||||||||||||||  |||||||||||||    
T  38749622 gacaccgataataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgttgtgtcgg 38749557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 41091308 - 41091266
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    |||| |||| |||||||||||||||| ||||||||||||||||    
T  41091308 taatgatttgagaaaatcacataattcagtgtaattatatgtg 41091266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 17593783 - 17593734
Alignment:
Q  39 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    |||| |||| ||||||||| |||||||||| ||||| |||||||||||||    
T  17593783 ttgaaaccgctaataatttgagaaaatcacgtaattcagtgtaattatat 17593734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 14674277 - 14674313
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||||| | |||||||||||||||||||||||||    
T  14674277 taataatttgaaaaaatcacataatttagtgtaatta 14674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 18421890 - 18421850
Alignment:
Q  51 ataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| |||||||||||||||  ||||||||||||||||    
T  18421890 ataatttgagaaaatcacataatccagtgtaattatatgtg 18421850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 19429438 - 19429482
Alignment:
Q  47 gttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||||| |||||||||||||| ||||||||| ||| ||||    
T  19429438 gttaataatttgagaaaatcacataacttagtgtaaatatctgtg 19429482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 19579709 - 19579745
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  19579709 taataatttgagaaaatcacataatttagtgcaatta 19579745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 33178033 - 33178069
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||||| | |||||||||||||||||||||||||    
T  33178033 taataatttaaaaaaatcacataatttagtgtaatta 33178069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 1035 - 1114
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg--gtgttgtgtcggtgttggacacaaca 118  Q
    ||||||| ||||||||| | ||||| |||||||| ||||||| ||||||||   |||| |||||||||||||||||||||    
T  1035 gacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaaca 1114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 25829 - 25781
Alignment:
Q  39 ttgacaccgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  25829 ttgacacggttaataattagagaaaatcacataatttagtgtaattata 25781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 28850 - 28913
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtc 102  Q
    ||||||||||||||||| |||||||| ||||||| | ||||||||||||||  |||||||||||    
T  28850 gacaccgttaataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgttgtgtc 28913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 99893 - 99943
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||| ||||||||||||||||| |||||||| | ||||||||||||||    
T  99893 gacaccgataataattttagaaaataacataattcaatgtaattatatgtg 99943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 90844 - 90890
Alignment:
Q  42 acaccgttaataattttagaaaatcacataatttagtgtaattatat 88  Q
    ||||| |||||||||| ||||||||| |||||| |||||||||||||    
T  90844 acaccattaataatttgagaaaatcatataattcagtgtaattatat 90890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 53189 - 53264
Alignment:
Q  50 aataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    |||||||| |||||||||||||||| ||||||||||||  ||| ||||  |||||||||| |||||  ||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgt 53264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 68299 - 68255
Alignment:
Q  43 caccgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||    
T  68299 caccgttaataatttgagaaaatcatataatttagtataattata 68255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 263423 - 263341
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgtttgata 129  Q
    ||||||||| |||||| ||||||||| ||||||||||||  |||  |||| ||||||||||  ||||| ||||||||| ||||    
T  263423 taataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgttcgata 263341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 1644 - 1690
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaattata 87  Q
    ||||||||||||||||| ||||||||| ||||||| || ||||||||    
T  1644 gacaccgttaataatttgagaaaatcatataatttggtataattata 1690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 9798 - 9756
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||    
T  9798 taataatttgagaaaatcacttaattcagtgtaattatatgtg 9756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 135363 - 135321
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaattatatgtg 91  Q
    ||||||||| ||||||||||||||||  |||||||||||||||    
T  135363 taataatttgagaaaatcacataattctgtgtaattatatgtg 135321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 241614 - 241678
Alignment:
Q  61 aaaatcacataatttagtgtaattat--atgtgggtgttgtgtcggtgttggacacaacacgtgt 123  Q
    ||||||||||||||||||||||||||   ||| ||||| |||| ||||| |||||| ||||||||    
T  241614 aaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgt 241678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 3908 - 3864
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  3908 gacacggttaataatttaaaaaaatcacataattcagtgtaatta 3864  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 46682 - 46726
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  46682 gacacagttaataatttgaaaaaatcacataattcagtgtaatta 46726  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 192308 - 192264
Alignment:
Q  41 gacaccgttaataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||||||||||||| ||||||| ||||||||  |||||||||    
T  192308 gacaccgttaataatttgagaaaattacataattcggtgtaatta 192264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 17800 - 17764
Alignment:
Q  49 taataattttagaaaatcacataatttagtgtaatta 85  Q
    ||||||||| | |||||||||||||||||||||||||    
T  17800 taataatttgaaaaaatcacataatttagtgtaatta 17764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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