View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0942_low_69 (Length: 359)
Name: NF0942_low_69
Description: NF0942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0942_low_69 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 292; Significance: 1e-164; HSPs: 20)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 352
Target Start/End: Complemental strand, 26129164 - 26128813
Alignment:
| Q |
1 |
tcactctcatccctctcatatttccttacaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcc |
100 |
Q |
| |
|
||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26129164 |
tcactctcatcgctctcctttttccttacaacccatataaaattatgacctgaattttcgagaccgtgtgcaatttctacaatctgagcattatcaagcc |
26129065 |
T |
|
| Q |
101 |
cagttagacttccaaaacttacatacaatacggactcattttcctttgagttaagccaatttagccactcttcctcttttccaagctcctctatgtgtcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
26129064 |
tagttagacttccaaaacttacatacagtacggactcattttgctttgagttaagccaatttaaccagtctgcctcttttccaagctcctctatgtgtcc |
26128965 |
T |
|
| Q |
201 |
cctattgcccttgttttcatcatccttgttagcccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataa |
300 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
26128964 |
cctattccccttgttttcatcatccttgttagcccatgatgaaactggtcctacactccaagatttgatccccaaggtagtgttacaaatgttttcataa |
26128865 |
T |
|
| Q |
301 |
tcactttccagttcatgaaaactattgcatagtgtaccataacttcttttct |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
26128864 |
tcactttccagttcatgaaaactattgcatagtgttccataacttcttttct |
26128813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 354
Target Start/End: Complemental strand, 26088379 - 26088026
Alignment:
| Q |
1 |
tcactctcatccctctcatatttccttacaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26088379 |
tcactctcatccctctcatatttccttacaacccagataaaattatgacctgaattttcgagaccgtgtgcaatttctacaatctgagcattatcaagcc |
26088280 |
T |
|
| Q |
101 |
cagttagacttccaaaacttacatacaatacggactcattttcctttgagttaagccaatttagccactcttcctcttttccaagctcctctatgtgtcc |
200 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26088279 |
taattagacttccaaaacttacatacaatacggactcattttcctttgagttaagccaatttagccactcttcctcttttccaagctcctctatgtgtcc |
26088180 |
T |
|
| Q |
201 |
cctattgcccttgttttcatcatccttgttagcccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataa |
300 |
Q |
| |
|
||||||| |||| |||||||||| |||||| | ||| | ||||||||| ||||||||||||| ||||||||||| |||||| | | ||| ||||||||| |
|
|
| T |
26088179 |
cctattggcctttttttcatcattcttgttggtccaagctgaaactggccctacactccaagatttgatccccattgtagtgcttccaagtttttcataa |
26088080 |
T |
|
| Q |
301 |
tcactttccagttcatgaaaactattgcatagtgtaccataacttcttttctct |
354 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |||||||| |||||||| |
|
|
| T |
26088079 |
tcactttccagttcatgaaaactattgtatagtgttccataactaattttctct |
26088026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 354
Target Start/End: Complemental strand, 26112167 - 26111814
Alignment:
| Q |
1 |
tcactctcatccctctcatatttccttacaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26112167 |
tcactctcatccctctcatatttccttacaacccagataaaattatgacctgaattttcgagaccgtgtgcaatttctacaatctgagcattatcaagcc |
26112068 |
T |
|
| Q |
101 |
cagttagacttccaaaacttacatacaatacggactcattttcctttgagttaagccaatttagccactcttcctcttttccaagctcctctatgtgtcc |
200 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26112067 |
taattagacttccaaaacttacatacaatacggactcattttcctttgagttaagccaatttagccactcttcctcttttccaagctcctctatgtgtcc |
26111968 |
T |
|
| Q |
201 |
cctattgcccttgttttcatcatccttgttagcccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataa |
300 |
Q |
| |
|
||||||| |||| |||||||||| |||||| | ||| | ||||||||| ||||||||||||| ||||||||||| |||||| | | ||| ||||||||| |
|
|
| T |
26111967 |
cctattggcctttttttcatcattcttgttggtccaagctgaaactggccctacactccaagatttgatccccattgtagtgcttccaagtttttcataa |
26111868 |
T |
|
| Q |
301 |
tcactttccagttcatgaaaactattgcatagtgtaccataacttcttttctct |
354 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |||||||| |||||||| |
|
|
| T |
26111867 |
tcactttccagttcatgaaaactattgtatagtgttccataactaattttctct |
26111814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 354
Target Start/End: Original strand, 19103097 - 19103450
Alignment:
| Q |
1 |
tcactctcatccctctcatatttccttacaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcc |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |
|
|
| T |
19103097 |
tcactctcatctctctcatttttccttacaacccagataaaattatgacctgaattttcaagaccgtgtgcgatttctacaatctgatcattttcaagcc |
19103196 |
T |
|
| Q |
101 |
cagttagacttccaaaacttacatacaatacggactcattttcctttgagttaagccaatttagccactcttcctcttttccaagctcctctatgtgtcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||| ||| || |
|
|
| T |
19103197 |
tagttagacttccaaaacttacatacaatacagactcattttgctttgagttaagccaatttagccactcttcctcttttccgatctcctctacgtgccc |
19103296 |
T |
|
| Q |
201 |
cctattgcccttgttttcatcatccttgttagcccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataa |
300 |
Q |
| |
|
|||| || |||| |||||||||||||||||||||| | ||||||||||||||||| ||||| |||||||||||| ||||| |||| ||| ||| ||||| |
|
|
| T |
19103297 |
cctactggcctttttttcatcatccttgttagccctagctgaaactggtcctacacaccaagatttgatccccaatgtagtcttaccaagttttacataa |
19103396 |
T |
|
| Q |
301 |
tcactttccagttcatgaaaactattgcatagtgtaccataacttcttttctct |
354 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
19103397 |
tcactttccagttcatgaaaactattgtatagtgttccataacttcttttctct |
19103450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 352
Target Start/End: Complemental strand, 26155785 - 26155449
Alignment:
| Q |
1 |
tcactctcatccctctcatatttccttacaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcc |
100 |
Q |
| |
|
||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26155785 |
tcactctcatcgctctcctttttccttacaacccagataaaattatgacctgaattttcgagaccgtgtgcaatttctacaatctgagcattatcaagcc |
26155686 |
T |
|
| Q |
101 |
cagttagacttccaaaacttacatacaatacggactcattttcctttgagttaagccaatttagccactcttcctcttttccaagctcctctatgtgtcc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| ||||||||||||| |
|
|
| T |
26155685 |
tagttagacttccaaaacttacatacaatacggactcattttgctttgtgttaagccaatttaaccactcggcctcttttccaag--------------- |
26155601 |
T |
|
| Q |
201 |
cctattgcccttgttttcatcatccttgttagcccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataa |
300 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| |
|
|
| T |
26155600 |
cgtattgcccttcttttcatcatccttgttagcccatgatgaaactggtcctacactccaagttttgatccccatggtagtgttactaagtttttcataa |
26155501 |
T |
|
| Q |
301 |
tcactttccagttcatgaaaactattgcatagtgtaccataacttcttttct |
352 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
26155500 |
tcactttccagttcatgaaaactattgtatagtgttccataacttcttttct |
26155449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 26 - 354
Target Start/End: Complemental strand, 26186814 - 26186486
Alignment:
| Q |
26 |
ttacaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcccagttagacttccaaaacttacata |
125 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||| |
|
|
| T |
26186814 |
ttacaacccagataaaattatgatctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcctagttacacttccaaaacttaaata |
26186715 |
T |
|
| Q |
126 |
caatacggactcattttcctttgagttaagccaatttagccactcttcctcttttccaagctcctctatgtgtcccctattgcccttgttttcatcatcc |
225 |
Q |
| |
|
|| |||||||||| ||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||| ||||| |||||||||||| |
|
|
| T |
26186714 |
cagtacggactcaatttgctttgagttaagccaatttagccactcttcctcttctgcaagctcctccatgtgtcccctattacccttcttttcatcatcc |
26186615 |
T |
|
| Q |
226 |
ttgttagcccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataatcactttccagttcatgaaaactat |
325 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| | ||||||||||||| ||||||||| ||| |||| ||||||||| ||||||||||||||||||| |
|
|
| T |
26186614 |
ttgttagccaatgatgaaactggtcctacactccatgatttgatccccaagatagtgttactaagttttttataatcactctccagttcatgaaaactat |
26186515 |
T |
|
| Q |
326 |
tgcatagtgtaccataacttcttttctct |
354 |
Q |
| |
|
|| ||||||| || |||||| |||||||| |
|
|
| T |
26186514 |
tgtatagtgttccgtaactttttttctct |
26186486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 354
Target Start/End: Complemental strand, 26191862 - 26191509
Alignment:
| Q |
1 |
tcactctcatccctctcatatttccttacaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcc |
100 |
Q |
| |
|
|||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||| | |||| |
|
|
| T |
26191862 |
tcactctcatccatatcatttttccttacaacccagataaaattatgacctgaattttcaagcccatgtgcaatttctacaagctgagcatgagttagcc |
26191763 |
T |
|
| Q |
101 |
cagttagacttccaaaacttacatacaatacggactcattttcctttgagttaagccaatttagccactcttcctcttttccaagctcctctatgtgtcc |
200 |
Q |
| |
|
||||| ||||||||| |||||||| | ||| |||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||||||| || |
|
|
| T |
26191762 |
tagttaaacttccaaagcttacataaagtacagactcattttgctttgagttaagccaatttagccactctgccacttttccattctcctctatgtgccc |
26191663 |
T |
|
| Q |
201 |
cctattgcccttgttttcatcatccttgttagcccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataa |
300 |
Q |
| |
|
| ||| ||||| |||||||||||||| |||||||| | ||||||||||||||||||||||| |||||||||| ||||| |||||||| || ||||| |
|
|
| T |
26191662 |
cttatcacccttcttttcatcatcctttttagcccaagctgaaactggtcctacactccaagatttgatcccccttgtagtattacaaagtttctcatat |
26191563 |
T |
|
| Q |
301 |
tcactttccagttcatgaaaactattgcatagtgtaccataacttcttttctct |
354 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||| ||||| ||| ||| |||| |
|
|
| T |
26191562 |
tcactttctagttcatgaaaactattgtatagtgtgccatagcttttttcctct |
26191509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 26179665 - 26179327
Alignment:
| Q |
16 |
tcatatttccttacaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcccagttagacttccaa |
115 |
Q |
| |
|
|||||||| ||| ||||||||||||||| |||||||| |||||||| ||||| ||||||||||||| |||||||| || || | || || |||| |
|
|
| T |
26179665 |
tcatatttttttataacccagataaaattttgacctgagttttcaagcccgtgcgcaatttctacaagctgagcatgcggaaacctaacaaggctaccaa |
26179566 |
T |
|
| Q |
116 |
aacttacatacaatacggactcattttcctttgagttaagccaatttagccactcttcctcttttccaagctcctctatgtgtcccctattgcccttgtt |
215 |
Q |
| |
|
|||||||||| ||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| |||| || |
|
|
| T |
26179565 |
aacttacatataatacagactcattttgctttgagttaagccaatttagccattcttcctcttttccaagttcctctatgtgtccccttttggccttttt |
26179466 |
T |
|
| Q |
216 |
ttcatcatccttgttagcccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataatcactttccagttca |
315 |
Q |
| |
|
|||| |||||||||||| ||| | ||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| |||||| |
|
|
| T |
26179465 |
ttcaccatccttgttagtccaagctgaaactggtcctacactccaagttttgatccccattgtagtgttacttaatttttcataatcactttcaagttca |
26179366 |
T |
|
| Q |
316 |
tgaaaactattgcatagtgtaccataacttcttttctct |
354 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
26179365 |
tgaaaactattgtatagtgttccataacttcttttctct |
26179327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 30 - 349
Target Start/End: Complemental strand, 26251416 - 26251094
Alignment:
| Q |
30 |
aacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcccagttagacttccaaaacttacatacaat |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||| | ||||| ||| || || |||||||||||||||||| |
|
|
| T |
26251416 |
aacccagataaaattatgacctgaattttcaagcccatgtgcaatttctacaagctgagcatgaggaagcctagtaaggctgccaaaacttacatacaat |
26251317 |
T |
|
| Q |
130 |
acggactcattttcctttgagttaagccaatttagccactcttcctcttttcc-aagc--tcctctatgtgtcccctattgcccttgttttcatcatcct |
226 |
Q |
| |
|
|| |||||||||| ||| |||||||||||||| ||| | ||| || |||||| |||| | ||| |||||||||||||| |||| |||||||||||| |
|
|
| T |
26251316 |
actgactcattttgcttcgagttaagccaattaagcaattctgtctgttttcctaagcttttctccatgtgtcccctattcgcctttctttcatcatcct |
26251217 |
T |
|
| Q |
227 |
tgttagcccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataatcactttccagttcatgaaaactatt |
326 |
Q |
| |
|
|||||||||| | ||||||||||| |||||||| | |||||| || | ||| | |||||||| || || |||||| |||| |||||||||||||| || |
|
|
| T |
26251216 |
tgttagcccaggcagaaactggtccgacactccatgatttgattccaattgtacttttacaaagcttctcgtaatcattttcaagttcatgaaaactgtt |
26251117 |
T |
|
| Q |
327 |
gcatagtgtaccataacttcttt |
349 |
Q |
| |
|
| |||||| ||||| ||||||| |
|
|
| T |
26251116 |
gtatagtgacccatagcttcttt |
26251094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 30 - 349
Target Start/End: Complemental strand, 26298016 - 26297694
Alignment:
| Q |
30 |
aacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcccagttagacttccaaaacttacatacaat |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || || |||||||||||| |||||||| | ||||| ||| | || |||||||||||||||||| |
|
|
| T |
26298016 |
aacccagataaaattatgacctgaattttcaagcccatgaacaatttctacaagctgagcataaggaagcctagtaaagctgccaaaacttacatacaat |
26297917 |
T |
|
| Q |
130 |
acggactcattttcctttgagttaagccaatttagccactcttcctcttttcc-aagc--tcctctatgtgtcccctattgcccttgttttcatcatcct |
226 |
Q |
| |
|
|| || ||||||||||| || ||||||||||||||| | ||| | |||||| |||| | ||| |||||||||||||| |||| |||||||||||| |
|
|
| T |
26297916 |
acagattcattttccttcgaattaagccaatttagcaattctgtatgttttcctaagcttttctcaatgtgtcccctattagcctttctttcatcatcct |
26297817 |
T |
|
| Q |
227 |
tgttagcccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataatcactttccagttcatgaaaactatt |
326 |
Q |
| |
|
|||||||||| | |||||||||||| |||||||| | ||||| || | ||||| ||| |||| || |||||||||||||| |||||||||||||| || |
|
|
| T |
26297816 |
tgttagcccaggctgaaactggtccgacactccatgacttgattccgattgtagttttaaaaagtttctcataatcactttcaagttcatgaaaactgtt |
26297717 |
T |
|
| Q |
327 |
gcatagtgtaccataacttcttt |
349 |
Q |
| |
|
| |||||| ||||| ||||||| |
|
|
| T |
26297716 |
gtatagtgacccatagcttcttt |
26297694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 30 - 349
Target Start/End: Complemental strand, 26242968 - 26242646
Alignment:
| Q |
30 |
aacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcccagttagacttccaaaacttacatacaat |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||| | || || ||| | || |||||||||||||||||| |
|
|
| T |
26242968 |
aacccagataaaattatgacctgaattttcaagcccgtgagcaatttctacaagctgagcatgaggaaacctagtctggctgccaaaacttacatacaat |
26242869 |
T |
|
| Q |
130 |
acggactcattttcctttgagttaagccaatttagccactcttcctcttttccaa-gctcctcta--tgtgtcccctattgcccttgttttcatcatcct |
226 |
Q |
| |
|
|| |||||||||| ||| |||||||||||||||| | ||| || |||||| | ||| ||| ||||||||||||| |||| ||| |||||||| |
|
|
| T |
26242868 |
acagactcattttgcttcaggttaagccaatttagcaattctgtctgttttcctatgcttttctccgtgtgtcccctattcgcctttcttttatcatcct |
26242769 |
T |
|
| Q |
227 |
tgttagcccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataatcactttccagttcatgaaaactatt |
326 |
Q |
| |
|
|||||||||| | |||||||||||| |||||||| | |||||| || | ||||| |||| ||| || |||||||||||||| |||||||||||||| || |
|
|
| T |
26242768 |
tgttagcccaggctgaaactggtccgacactccatgatttgattccgattgtagttttactaagattctcataatcactttcaagttcatgaaaactgtt |
26242669 |
T |
|
| Q |
327 |
gcatagtgtaccataacttcttt |
349 |
Q |
| |
|
| |||||| ||||| ||||||| |
|
|
| T |
26242668 |
gtatagtgacccatagcttcttt |
26242646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 341
Target Start/End: Complemental strand, 26302391 - 26302059
Alignment:
| Q |
16 |
tcatatttccttacaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcccagttagacttccaa |
115 |
Q |
| |
|
|||||||| | ||| ||||| |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||| | | ||| | || || |||| |
|
|
| T |
26302391 |
tcatattttcgtacgacccaaataaaactatgacctgaattttcaagcccgtgtgcaatttctacaagctgagcatgaggatgccaaacaaggctgccaa |
26302292 |
T |
|
| Q |
116 |
aacttacatacaatacggactcattttcctttgagttaagccaatttagccactcttcctcttttcc-aagctcctct------atgtgtcccctattgc |
208 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||||||| | | ||| |||||||| ||| || ||| ||||||||||| |
|
|
| T |
26302291 |
aacttacatacaatacagactcattttgctttgagttaagccaatttaccaattctgtttcttttccaaagttcttctccgcgcgcgtgtcccctatgag |
26302192 |
T |
|
| Q |
209 |
ccttgttttcatcatccttgttagcccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataatcactttc |
308 |
Q |
| |
|
|||| ||||||| | |||||||||||| ||||||||||||||| |||||| |||||| |||| || || | || ||| || ||||||||||||| |
|
|
| T |
26302191 |
tcttgctttcatccttcttgttagcccaaacagaaactggtcctacattccaagatttgattcccattgttgtttgactaagtttcacataatcactttc |
26302092 |
T |
|
| Q |
309 |
cagttcatgaaaactattgcatagtgtaccata |
341 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||| |
|
|
| T |
26302091 |
aagttcatgaaaactattgtatagtgttccata |
26302059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 28 - 354
Target Start/End: Complemental strand, 26224093 - 26223776
Alignment:
| Q |
28 |
acaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcccagttagacttccaaaacttacataca |
127 |
Q |
| |
|
|||||||| || ||||||||||| |||||||||||||| || || ||||| ||||||| ||| | ||||| ||| || ||||||||||||||||||| |
|
|
| T |
26224093 |
acaacccaaatgaaattatgaccagaattttcaagaccatgagctatttcagcaatctgttcatgagaaagcctagtaaggcttccaaaacttacataca |
26223994 |
T |
|
| Q |
128 |
atacggactcattttcctttgagttaagccaatttagccactcttcctcttttccaa-gctcctctatgtgtcccctattgcccttgttttcatcatcct |
226 |
Q |
| |
|
| || ||||| |||||||| || ||||||||||||| | | |||| |||||||||| | || | | ||||| ||| || ||||| || | |
|
|
| T |
26223993 |
acacagactcgttttccttagaattaagccaatttaccaattcttgatcttttccaatgttcttttctgtgtatcct----------ttatcatcgtctt |
26223904 |
T |
|
| Q |
227 |
tgttagcccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataatcactttccagttcatgaaaactatt |
326 |
Q |
| |
|
||||| ||||| |||||| ||||||| |||||||| ||||||||| | ||||| |||| ||| || |||||||||||||| ||||||||||||||||| |
|
|
| T |
26223903 |
tgttaatccatgctgaaaccggtcctatactccaagatttgatccctattgtagttttaccaagtttctcataatcactttctagttcatgaaaactatt |
26223804 |
T |
|
| Q |
327 |
gcatagtgtaccataacttcttttctct |
354 |
Q |
| |
|
| ||||||| ||| | |||||||||||| |
|
|
| T |
26223803 |
gtatagtgttccaaagcttcttttctct |
26223776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 28 - 354
Target Start/End: Complemental strand, 26204455 - 26204138
Alignment:
| Q |
28 |
acaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcccagttagacttccaaaacttacataca |
127 |
Q |
| |
|
|||||||| || ||||||||||| |||||||||||||| || || ||||| ||||||| ||| | ||||| ||| || ||||||||||||||||||| |
|
|
| T |
26204455 |
acaacccaaatgaaattatgaccagaattttcaagaccatgagctatttcagcaatctgttcatgagaaagcctagtaaggcttccaaaacttacataca |
26204356 |
T |
|
| Q |
128 |
atacggactcattttcctttgagttaagccaatttagccactcttcctcttttccaa-gctcctctatgtgtcccctattgcccttgttttcatcatcct |
226 |
Q |
| |
|
| || ||||| |||||||| || ||||||||||||| | | |||| |||||||||| | || | | |||| ||| || ||||| || | |
|
|
| T |
26204355 |
acacagactcgttttccttagaattaagccaatttaccaattcttgatcttttccaatgttcttttccgtgtatcct----------ttatcatcgtctt |
26204266 |
T |
|
| Q |
227 |
tgttagcccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataatcactttccagttcatgaaaactatt |
326 |
Q |
| |
|
||||| ||||| |||||| ||||||| |||||||| ||||||||| | ||||| |||| ||| || |||||||||||||| ||||||||||||||||| |
|
|
| T |
26204265 |
tgttaatccatgctgaaaccggtcctatactccaagatttgatccctattgtagttttaccaagtttctcataatcactttctagttcatgaaaactatt |
26204166 |
T |
|
| Q |
327 |
gcatagtgtaccataacttcttttctct |
354 |
Q |
| |
|
| ||||||| ||| | |||||||||||| |
|
|
| T |
26204165 |
gtatagtgttccaaagcttcttttctct |
26204138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 26278267 - 26278167
Alignment:
| Q |
30 |
aacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcccagttagacttccaaaacttacatacaat |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | ||||| | | || || ||||| |||||||||||| |
|
|
| T |
26278267 |
aacccagataaaattatgacctgaattttcaagcccgtgtgcaatttctacaagctgagcatgaggaagcctaataaggctgccaaagcttacatacaat |
26278168 |
T |
|
| Q |
130 |
a |
130 |
Q |
| |
|
| |
|
|
| T |
26278167 |
a |
26278167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 26260449 - 26260307
Alignment:
| Q |
21 |
tttccttacaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcccagttagacttccaaaactt |
120 |
Q |
| |
|
|||||| |||||||| || ||||||||||||||||||||||| || || || ||||| |||| |||||||| | ||||| ||| | |||||||||||| |
|
|
| T |
26260449 |
tttcctaacaacccaaatgaaattatgacctgaattttcaagtccatgagctatttcaacaacctgagcataagaaagcctagtcaagcttccaaaactt |
26260350 |
T |
|
| Q |
121 |
acatacaatacggactcattttcctttgagttaagccaattta |
163 |
Q |
| |
|
|||||||| || || ||||| || |||||||||||||||| |
|
|
| T |
26260349 |
acatacaacacagaatcattagggttagagttaagccaattta |
26260307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 26227549 - 26227484
Alignment:
| Q |
21 |
tttccttacaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctg |
86 |
Q |
| |
|
|||||| |||||||| || |||||||||||||||||||||||||| || || |||||||||||||| |
|
|
| T |
26227549 |
tttcctaacaacccaaatgaaattatgacctgaattttcaagaccatgagctatttctacaatctg |
26227484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 26207988 - 26207918
Alignment:
| Q |
21 |
tttccttacaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcat |
91 |
Q |
| |
|
|||||| |||||||| || ||||||||||| |||||||| ||||| || || ||||||||||||||||||| |
|
|
| T |
26207988 |
tttcctaacaacccaaatgaaattatgaccggaattttccagaccatgagctatttctacaatctgagcat |
26207918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 345
Target Start/End: Complemental strand, 26227360 - 26227249
Alignment:
| Q |
234 |
ccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataatcactttccagttcatgaaaactattgcatagt |
333 |
Q |
| |
|
||||| ||||||||||||||||||||| | ||||||||||| || | || |||| || |||||||||| ||| ||||| ||||| |||||||||| |
|
|
| T |
26227360 |
ccatgctgaaactggtcctacactccatgctttgatccccattgtgctcttgtaaagattctcataatcaccttcaagttcgtgaaagctattgcataaa |
26227261 |
T |
|
| Q |
334 |
gtaccataactt |
345 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
26227260 |
gttccataactt |
26227249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 26260285 - 26260237
Alignment:
| Q |
212 |
tgttttcatcatccttgttagcccatgatgaaactggtcctacactcca |
260 |
Q |
| |
|
||||| |||||||||||||| ||||| |||||||||||| |||||||| |
|
|
| T |
26260285 |
tgtttccatcatccttgttaatccatgttgaaactggtcccacactcca |
26260237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 16 - 348
Target Start/End: Complemental strand, 44903835 - 44903500
Alignment:
| Q |
16 |
tcatatttccttacaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttctacaatctgagcattatcaagcccagttagacttccaa |
115 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||| |||||||| | |||| ||| || ||||||| |
|
|
| T |
44903835 |
tcatttttccttacaacccagataaaattatgacctgacttttcaagcccatgtgcaatttctacaagctgagcatgaaaaagcttagtaaggcttccaa |
44903736 |
T |
|
| Q |
116 |
aacttacatacaatacggactcattttcctttgagttaagccaatttagccactcttcctcttttccaa---gctcctctatgtgtcccctattgccctt |
212 |
Q |
| |
|
||||||||||||| || |||||||||| |||||||||||||||||||||| | ||| ||||||| ||| || ||| | |||||||||||||||||| |
|
|
| T |
44903735 |
aacttacatacaacacagactcattttgctttgagttaagccaatttagcaattctctctctttttcaacgttcttctccacgtgtcccctattgccctt |
44903636 |
T |
|
| Q |
213 |
gttttcatcatccttgttagcccatgatgaaactggtcctacactccaagttttgatccccaaggtagtgttacaaaggttttcataatcactttccagt |
312 |
Q |
| |
|
||||||| ||||||||||||| | ||||||||||||||||||||||| || ||||||| ||||| |||| || || |||||||||||||| ||| |
|
|
| T |
44903635 |
ccgttcatcacccttgttagcccaagttgaaactggtcctacactccaagacttaatccccattgtagttttactaactttctcataatcactttcaagt |
44903536 |
T |
|
| Q |
313 |
tcatgaaaactattgcatagtgtaccataacttctt |
348 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
44903535 |
tcatgaaaactattgcatattgtcccataacttctt |
44903500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 5995053 - 5995102
Alignment:
| Q |
28 |
acaacccagataaaattatgacctgaattttcaagaccgtgtgcaatttc |
77 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
5995053 |
acaacccaaatgaaattatgacctgaattttcaagtgcatgtgcaatttc |
5995102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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