View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0943_low_17 (Length: 369)
Name: NF0943_low_17
Description: NF0943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0943_low_17 |
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Alignment Details
Target: chr2 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 84 - 340
Target Start/End: Original strand, 3088767 - 3089023
Alignment:
| Q |
84 |
attattctcacagcattagcagattactatgacaaagatgtgacactcctcctccaagacattgagaaaaactataccaatgtaagtaacattatttaaa |
183 |
Q |
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| T |
3088767 |
attattctcacagcattagcagattactatgacaaagatgtgacactcctcctccaagacattgagaaaaactataccaatgtaagtaacattatttaaa |
3088866 |
T |
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| Q |
184 |
tttttctgtcactcttcctagattgaatgaacacatggattttttattggctccaaataaaatcaacttattatttcttgtatgcagggaatctggtcag |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3088867 |
tttttctgtcactcttcctagattgaatgaacacatggattttttattggctccaaataaaatcaacttattatttcttgtatgcagggaatctggtcag |
3088966 |
T |
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| Q |
284 |
atgatgttgcttcttgggaacattgcaaggatatctctagttgtgtaaataagtgag |
340 |
Q |
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| T |
3088967 |
atgatgttgcttcttgggaacattgcaaggatatctctagttgtgtaaataagtgag |
3089023 |
T |
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