View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0943_low_51 (Length: 257)
Name: NF0943_low_51
Description: NF0943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0943_low_51 |
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Alignment Details
Target: chr4 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 43589930 - 43589749
Alignment:
| Q |
46 |
aagagtgcttataattagggacaaaaagagtagtattataagtctattattcgctttactcttttagtccattggcacatatagcccttaatgtttgagc |
145 |
Q |
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| T |
43589930 |
aagagtgcttataattagggacaaaaaaaatagtattataagtctattattcgctttactcttttagtccattggcacatatagcccttaatgtttgagc |
43589831 |
T |
|
| Q |
146 |
tctgctaaatgtttgaagtctcgtgtaacaagcgggccaaatcaatcttacctatttgaccaatcgaataagaaaaaagtga |
227 |
Q |
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| T |
43589830 |
tctgctaaatgtttgaagtctcgtgtaacaagcaggccagatcaatcttacctatttgaccaatcgaataagaaaaaagtga |
43589749 |
T |
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