View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0944_high_6 (Length: 392)
Name: NF0944_high_6
Description: NF0944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0944_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 30 - 381
Target Start/End: Original strand, 45932841 - 45933194
Alignment:
| Q |
30 |
aatttaccactagctttttcttcactggcactacattccatttcccaatataaaattaaatgccgtaattaatttgcattgaaccttgaaacaatactag |
129 |
Q |
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| T |
45932841 |
aatttaccactagctttttcttcactggctctacattccatttcccaatataaaattaaatgccgtaattaatttgcattgaaccttgaaacaatactag |
45932940 |
T |
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| Q |
130 |
catctttgaaaagctgaaaatgaaacttctcttataaatttgaaagttagcttaattcatggaagagaagcattaagcattaagcagcatgcaatgttgc |
229 |
Q |
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| T |
45932941 |
catctttgaaaagctgaaaatgaaacttctcttataaatttgaaagttagcttaattcatggaagag-------aagcattaagcagcatgcaatgttgc |
45933033 |
T |
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| Q |
230 |
aaacagttgttaacatggaataagctagcccttgatagggtgggaaatgcaag---------ccatgaatgaataatgtgatgggatgggacccttttat |
320 |
Q |
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| T |
45933034 |
aaacagttgttaacatggaataagctagcccttgatagggtgggaaatgcaagccatgaataccatgaatgaataatgtgatgggatgggacccttttat |
45933133 |
T |
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| Q |
321 |
ttattgtgtttgttatgacttgaatttcgcatagattgccagctatagatcctgctttcat |
381 |
Q |
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| T |
45933134 |
ttattgtgtttgttatgacttgaatttcgcatagattgccagctatagatcctgctttcat |
45933194 |
T |
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