View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0944_low_32 (Length: 269)
Name: NF0944_low_32
Description: NF0944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0944_low_32 |
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Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 30 - 248
Target Start/End: Original strand, 14501704 - 14501922
Alignment:
| Q |
30 |
gacgagtgcagttggctacactcgaatattttggcgtgacgattgaaatcatcaaactcgccattttcgccatacaccaccgagaaagggtgaggtaaca |
129 |
Q |
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| T |
14501704 |
gacgagtgcagttggctacactcgaatattttggcgtgacgattgaaatcatcaaactcgccattttcaccatccaccaccgagaaagggtgaggtaaca |
14501803 |
T |
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| Q |
130 |
tccttttcatattctccattttctgtttcatcattcataaatgttgattattcatcgccatagatccattttcaatctcaaactctttactttctcatca |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| || |
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| T |
14501804 |
tccttttcatattctccattttctgtttcatcattcataaatgttgattattcatcgccatagatccattttcaatctcaaacccttaactttctcacca |
14501903 |
T |
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| Q |
230 |
aacccaaaaaccccattac |
248 |
Q |
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| T |
14501904 |
aacccaataaccccattac |
14501922 |
T |
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