View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0945_high_30 (Length: 327)
Name: NF0945_high_30
Description: NF0945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0945_high_30 |
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Alignment Details
Target: chr6 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 31 - 316
Target Start/End: Complemental strand, 2383513 - 2383228
Alignment:
| Q |
31 |
gtaccccgaaatttacaacactcacacacgatgtgcaccaactatgaaacaattgagccgattcatacgagagaagagaccatgttcaacatgaaaccct |
130 |
Q |
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| T |
2383513 |
gtaccccgaaatttacaacactcacacacaatgtgcaccaactatgaaacaattgagctgattcatacgagagaagagaccatgttcaacatgaaaccct |
2383414 |
T |
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| Q |
131 |
attctctttattcatgattgaagcaagaaaaccctaatttctgtgaagagaaataaactcacacacatgattaggagtgagaattttatggagcagcaca |
230 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
2383413 |
attctctttattcatgattgaagcaagaaaaccctaatttctgtgaagagaaataaattcacacacatgattaggagtgagaattttatggagcagcaca |
2383314 |
T |
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| Q |
231 |
ccttgcccatttgaataatttcaagtaatgaatcttcttgattttgtttggagaattaccaccaccaaactctgataatgattcat |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2383313 |
ccttgcccatttgaataatttcaagtaatgaatcttcttgattttgtttggagaattaccaccaccaaactctgataatgattcat |
2383228 |
T |
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