View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0945_high_55 (Length: 249)
Name: NF0945_high_55
Description: NF0945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0945_high_55 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 27 - 249
Target Start/End: Original strand, 46921543 - 46921765
Alignment:
| Q |
27 |
accaactctactatatccacaagaccctttcacctatggattcaacaaagaccactacaattacaaccttttaacagattctgaagcaaactttgactac |
126 |
Q |
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| T |
46921543 |
accaactctactatatccacaagaccctttcacctatggattcaacaaagaccactacaattacaaccttttaacagattctgaagcaaactttgactac |
46921642 |
T |
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| Q |
127 |
accaatttcaaccttcaaaatgaagaacaaggttttgtttctacttttctcaagaaccaacaaacagagaattatccttatgaaaattggagtaacaatt |
226 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46921643 |
accaatttcaaccttcaaaatgaagaacaaggttttgtttctacttttctcaagaaccaacaaacagagaattatccttatgaaaattggagtaacaatt |
46921742 |
T |
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| Q |
227 |
gtccatctttagatagttcaatt |
249 |
Q |
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||||||||||||||||||||||| |
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| T |
46921743 |
gtccatctttagatagttcaatt |
46921765 |
T |
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