View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0945_high_57 (Length: 246)
Name: NF0945_high_57
Description: NF0945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0945_high_57 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 3 - 234
Target Start/End: Original strand, 39298724 - 39298955
Alignment:
| Q |
3 |
tcacgccatgattcatctttcttcttagcagtaaactccttagcagtctcgccagcagaagcagccaaacctttcacaacatccaccgatttcgacgcaa |
102 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
39298724 |
tcacgccatgattcatctttcttcttagcagtaaactccttagcagtctcaccagcagaagcagccaaacctttcacaacatccaccgatttcaacgcaa |
39298823 |
T |
|
| Q |
103 |
gctcggccgcctttggtacaacatatccagccgctccttcaacagcatgcgctgcagccttagttccatccacggtcaacttcgtcgaataatgtgccgc |
202 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39298824 |
gcccggccgcctttggtacaacatatccagccgctccttcaacagcatgcgctgcagccttagttccatccacggtcaacttcgtcgaataatgtgccgc |
39298923 |
T |
|
| Q |
203 |
agtccaccctgccacggtggccttatccttca |
234 |
Q |
| |
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|||||||||||||||||||||||||||||||| |
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| T |
39298924 |
agtccaccctgccacggtggccttatccttca |
39298955 |
T |
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