View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0945_low_9 (Length: 534)

Name: NF0945_low_9
Description: NF0945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0945_low_9
NF0945_low_9
[»] chr4 (52 HSPs)
chr4 (59-290)||(50745104-50745352)
chr4 (59-290)||(18123751-18123999)
chr4 (288-506)||(22621864-22622082)
chr4 (291-506)||(10802889-10803104)
chr4 (291-506)||(38032323-38032538)
chr4 (289-506)||(7261446-7261663)
chr4 (330-506)||(34095562-34095738)
chr4 (287-506)||(38031164-38031383)
chr4 (330-506)||(22623046-22623222)
chr4 (330-506)||(8815260-8815436)
chr4 (289-505)||(10804099-10804315)
chr4 (290-506)||(17356360-17356576)
chr4 (292-506)||(23757873-23758088)
chr4 (330-506)||(5433310-5433486)
chr4 (290-506)||(18091579-18091795)
chr4 (294-494)||(17357778-17357978)
chr4 (330-497)||(8814174-8814340)
chr4 (330-501)||(48499403-48499573)
chr4 (330-506)||(56234924-56235099)
chr4 (330-506)||(48501227-48501402)
chr4 (330-465)||(35193140-35193275)
chr4 (330-496)||(35191856-35192019)
chr4 (330-423)||(56233763-56233856)
chr4 (392-506)||(35925792-35925906)
chr4 (392-506)||(35927019-35927133)
chr4 (330-502)||(36074701-36074873)
chr4 (289-379)||(48463014-48463104)
chr4 (288-384)||(34122827-34122923)
chr4 (434-506)||(48081283-48081355)
chr4 (330-402)||(48081597-48081669)
chr4 (434-505)||(34122725-34122796)
chr4 (440-506)||(48081470-48081536)
chr4 (434-505)||(48462907-48462978)
chr4 (290-379)||(34121298-34121387)
chr4 (288-397)||(48080267-48080376)
chr4 (330-387)||(48081552-48081609)
chr4 (461-506)||(56233878-56233923)
chr4 (59-174)||(30495887-30496002)
chr4 (370-403)||(34122868-34122901)
chr4 (441-502)||(48462272-48462333)
chr4 (370-402)||(48463051-48463083)
chr4 (370-402)||(56233743-56233775)
chr4 (370-401)||(35191836-35191867)
chr4 (372-403)||(48499385-48499416)
chr4 (439-505)||(34121428-34121494)
chr4 (374-403)||(5433473-5433502)
chr4 (370-403)||(8814154-8814187)
chr4 (370-403)||(48081393-48081426)
chr4 (374-402)||(8815424-8815452)
chr4 (370-402)||(34095726-34095758)
chr4 (370-402)||(34121318-34121350)
chr4 (370-402)||(35193263-35193295)
[»] chr3 (80 HSPs)
chr3 (59-290)||(4359854-4360102)
chr3 (287-506)||(28777590-28777809)
chr3 (290-506)||(31937034-31937250)
chr3 (293-506)||(43393956-43394170)
chr3 (330-506)||(47431090-47431266)
chr3 (291-501)||(31938216-31938425)
chr3 (292-506)||(35759134-35759348)
chr3 (289-506)||(17116200-17116416)
chr3 (330-506)||(46902370-46902546)
chr3 (330-506)||(55209821-55209996)
chr3 (291-506)||(2233208-2233423)
chr3 (330-506)||(28776487-28776663)
chr3 (330-506)||(46903527-46903703)
chr3 (330-505)||(21729092-21729267)
chr3 (352-506)||(17740891-17741045)
chr3 (352-506)||(19042211-19042365)
chr3 (357-506)||(5689785-5689934)
chr3 (289-506)||(52521925-52522141)
chr3 (290-506)||(23073277-23073493)
chr3 (288-492)||(54354308-54354512)
chr3 (292-506)||(37609322-37609536)
chr3 (330-490)||(17742211-17742372)
chr3 (330-490)||(19043531-19043692)
chr3 (374-506)||(37610666-37610798)
chr3 (290-504)||(2232601-2232815)
chr3 (289-506)||(21727908-21728125)
chr3 (330-495)||(53180718-53180883)
chr3 (294-490)||(5691014-5691209)
chr3 (330-506)||(52525263-52525438)
chr3 (290-506)||(11348375-11348590)
chr3 (289-489)||(54353021-54353221)
chr3 (291-504)||(10979080-10979293)
chr3 (370-506)||(35758083-35758219)
chr3 (334-505)||(11346855-11347026)
chr3 (372-506)||(55210811-55210945)
chr3 (287-422)||(23091187-23091322)
chr3 (292-499)||(53765876-53766083)
chr3 (330-506)||(47429666-47429837)
chr3 (334-502)||(47917520-47917687)
chr3 (330-423)||(53764467-53764560)
chr3 (330-505)||(50881020-50881188)
chr3 (291-423)||(53178701-53178833)
chr3 (386-506)||(50879782-50879902)
chr3 (379-506)||(10978093-10978219)
chr3 (349-421)||(33113306-33113379)
chr3 (330-423)||(46986077-46986169)
chr3 (330-403)||(23072099-23072171)
chr3 (330-403)||(43392665-43392738)
chr3 (290-424)||(17117386-17117518)
chr3 (334-505)||(15290394-15290564)
chr3 (439-506)||(33111748-33111815)
chr3 (290-379)||(34014507-34014596)
chr3 (437-501)||(53764896-53764959)
chr3 (451-506)||(23072199-23072254)
chr3 (455-506)||(43392770-43392821)
chr3 (290-379)||(24376458-24376547)
chr3 (330-379)||(27750461-27750510)
chr3 (330-391)||(50879533-50879594)
chr3 (455-504)||(53101686-53101735)
chr3 (369-403)||(50879512-50879546)
chr3 (369-402)||(17742360-17742393)
chr3 (369-402)||(19043680-19043713)
chr3 (370-403)||(34014527-34014560)
chr3 (370-403)||(46902350-46902383)
chr3 (370-403)||(46903690-46903723)
chr3 (370-402)||(43392645-43392677)
chr3 (370-402)||(47429646-47429678)
chr3 (370-402)||(52525426-52525458)
chr3 (452-495)||(27749248-27749291)
chr3 (371-406)||(46986153-46986188)
chr3 (370-401)||(55209801-55209832)
chr3 (455-505)||(34015691-34015741)
chr3 (370-403)||(34015834-34015867)
chr3 (370-399)||(50881179-50881208)
chr3 (370-403)||(53101839-53101872)
chr3 (115-171)||(5171515-5171571)
chr3 (374-402)||(24376495-24376523)
chr3 (369-401)||(33113378-33113410)
chr3 (370-398)||(37610797-37610825)
chr3 (370-402)||(47431254-47431286)
[»] chr7 (66 HSPs)
chr7 (287-506)||(19217623-19217842)
chr7 (290-506)||(43113673-43113889)
chr7 (288-506)||(29186661-29186879)
chr7 (287-506)||(44417453-44417672)
chr7 (286-506)||(29187933-29188153)
chr7 (288-506)||(18788463-18788681)
chr7 (285-506)||(43962472-43962693)
chr7 (291-506)||(9391519-9391734)
chr7 (287-506)||(48792439-48792658)
chr7 (345-506)||(9392718-9392879)
chr7 (330-506)||(44420426-44420601)
chr7 (290-506)||(48793419-48793635)
chr7 (291-502)||(13750543-13750754)
chr7 (330-501)||(27072562-27072733)
chr7 (330-501)||(27205580-27205751)
chr7 (294-506)||(3537429-3537640)
chr7 (334-506)||(18787191-18787363)
chr7 (335-506)||(45399913-45400084)
chr7 (330-501)||(7011672-7011844)
chr7 (330-501)||(7027030-7027202)
chr7 (330-506)||(13597183-13597358)
chr7 (334-505)||(37237132-37237300)
chr7 (288-500)||(32519658-32519870)
chr7 (358-506)||(43961000-43961148)
chr7 (370-506)||(44748466-44748602)
chr7 (330-489)||(44230466-44230625)
chr7 (294-496)||(44746729-44746931)
chr7 (370-505)||(26005430-26005565)
chr7 (330-495)||(32518460-32518616)
chr7 (331-506)||(12630603-12630779)
chr7 (291-504)||(3538478-3538681)
chr7 (372-506)||(43114990-43115124)
chr7 (369-506)||(13599160-13599298)
chr7 (370-506)||(13749082-13749217)
chr7 (289-419)||(37235811-37235941)
chr7 (291-384)||(45688867-45688960)
chr7 (330-402)||(12630542-12630614)
chr7 (289-384)||(42611433-42611528)
chr7 (455-505)||(44231765-44231815)
chr7 (460-505)||(9357700-9357745)
chr7 (290-379)||(26006773-26006862)
chr7 (290-379)||(27071019-27071108)
chr7 (290-379)||(27207205-27207294)
chr7 (85-170)||(43853786-43853871)
chr7 (434-505)||(45688991-45689060)
chr7 (292-379)||(7057359-7057446)
chr7 (446-501)||(37235939-37235994)
chr7 (434-499)||(29409151-29409216)
chr7 (457-505)||(45398689-45398737)
chr7 (434-501)||(42611559-42611626)
chr7 (370-403)||(7057395-7057428)
chr7 (370-403)||(44231908-44231941)
chr7 (435-495)||(36395952-36396012)
chr7 (370-402)||(43960964-43960996)
chr7 (370-402)||(45688886-45688918)
chr7 (331-381)||(19016725-19016775)
chr7 (434-496)||(19218897-19218959)
chr7 (435-505)||(47536757-47536827)
chr7 (370-399)||(7011652-7011681)
chr7 (370-399)||(7027010-7027039)
chr7 (370-403)||(19008950-19008983)
chr7 (370-403)||(26006809-26006842)
chr7 (374-403)||(27071043-27071072)
chr7 (374-403)||(27207241-27207270)
chr7 (370-403)||(32518440-32518473)
chr7 (369-402)||(44420589-44420622)
[»] chr8 (36 HSPs)
chr8 (287-506)||(9244061-9244280)
chr8 (291-506)||(26364741-26364956)
chr8 (289-506)||(20308921-20309138)
chr8 (289-506)||(21095554-21095771)
chr8 (330-506)||(9245334-9245510)
chr8 (330-506)||(41636870-41637046)
chr8 (330-506)||(30640837-30641012)
chr8 (330-506)||(522000-522176)
chr8 (293-501)||(34642667-34642874)
chr8 (334-506)||(30644608-30644779)
chr8 (286-506)||(43584403-43584623)
chr8 (334-506)||(26366097-26366269)
chr8 (291-492)||(41638070-41638270)
chr8 (330-504)||(20309956-20310131)
chr8 (330-504)||(21096589-21096764)
chr8 (330-496)||(34643878-34644038)
chr8 (289-379)||(3714550-3714640)
chr8 (334-505)||(43585849-43586019)
chr8 (434-505)||(3714443-3714514)
chr8 (434-506)||(22012280-22012352)
chr8 (330-393)||(31203005-31203068)
chr8 (434-502)||(22013166-22013234)
chr8 (434-505)||(3713185-3713256)
chr8 (447-502)||(31203071-31203126)
chr8 (434-495)||(20066216-20066277)
chr8 (330-379)||(43134079-43134128)
chr8 (344-379)||(3713114-3713149)
chr8 (455-501)||(43133976-43134022)
chr8 (370-401)||(522165-522196)
chr8 (372-403)||(3714586-3714617)
chr8 (80-130)||(13341371-13341421)
chr8 (374-403)||(9245497-9245526)
chr8 (374-403)||(30640821-30640850)
chr8 (374-403)||(43134115-43134144)
chr8 (370-402)||(20310119-20310151)
chr8 (370-402)||(21096752-21096784)
[»] chr1 (34 HSPs)
chr1 (287-506)||(51693143-51693362)
chr1 (330-506)||(7111378-7111554)
chr1 (291-506)||(17244175-17244390)
chr1 (290-506)||(7110225-7110441)
chr1 (291-506)||(51468339-51468554)
chr1 (287-506)||(52086623-52086840)
chr1 (330-496)||(5488780-5488946)
chr1 (297-492)||(50484913-50485108)
chr1 (290-489)||(18819261-18819460)
chr1 (334-506)||(45228318-45228490)
chr1 (330-506)||(51468804-51468980)
chr1 (372-503)||(52761502-52761633)
chr1 (330-492)||(5488540-5488702)
chr1 (290-506)||(52759362-52759578)
chr1 (330-489)||(40187642-40187800)
chr1 (330-504)||(45229508-45229682)
chr1 (330-506)||(38235053-38235228)
chr1 (330-504)||(52087679-52087853)
chr1 (293-505)||(47533758-47533970)
chr1 (330-496)||(1821947-1822114)
chr1 (288-506)||(50483508-50483725)
chr1 (290-490)||(1823215-1823411)
chr1 (290-453)||(17245621-17245783)
chr1 (434-504)||(21203154-21203224)
chr1 (330-485)||(47532996-47533150)
chr1 (292-386)||(25181502-25181596)
chr1 (370-403)||(25181520-25181553)
chr1 (370-402)||(18820823-18820855)
chr1 (369-403)||(5488933-5488967)
chr1 (370-403)||(51468967-51469000)
chr1 (373-402)||(52087841-52087870)
chr1 (461-505)||(18820679-18820723)
chr1 (370-402)||(38235216-38235248)
chr1 (370-402)||(45229670-45229702)
[»] chr6 (24 HSPs)
chr6 (290-506)||(32348940-32349156)
chr6 (289-504)||(11801247-11801462)
chr6 (330-506)||(34996664-34996840)
chr6 (289-506)||(32347806-32348023)
chr6 (330-506)||(3000696-3000872)
chr6 (330-506)||(32713786-32713962)
chr6 (330-506)||(34995391-34995566)
chr6 (290-506)||(18572884-18573099)
chr6 (287-506)||(32712351-32712570)
chr6 (345-506)||(19383058-19383218)
chr6 (330-423)||(29479180-29479273)
chr6 (392-501)||(21094506-21094615)
chr6 (394-497)||(27719839-27719941)
chr6 (286-403)||(18574299-18574416)
chr6 (440-506)||(21095282-21095348)
chr6 (455-506)||(18574216-18574267)
chr6 (455-505)||(29477904-29477954)
chr6 (435-492)||(7628469-7628526)
chr6 (442-501)||(7629715-7629773)
chr6 (370-403)||(3000859-3000892)
chr6 (370-402)||(29477778-29477810)
chr6 (435-494)||(13562214-13562273)
chr6 (458-494)||(13561440-13561476)
chr6 (374-402)||(34995375-34995403)
[»] chr5 (24 HSPs)
chr5 (288-506)||(19229976-19230194)
chr5 (293-506)||(19228840-19229053)
chr5 (287-506)||(12372310-12372529)
chr5 (291-489)||(9083216-9083414)
chr5 (290-501)||(39350553-39350764)
chr5 (290-494)||(18654295-18654500)
chr5 (330-506)||(13278134-13278310)
chr5 (289-493)||(9081977-9082181)
chr5 (289-495)||(18655566-18655772)
chr5 (330-506)||(39349519-39349695)
chr5 (330-506)||(39164095-39164269)
chr5 (330-506)||(12373620-12373800)
chr5 (287-506)||(13276815-13277026)
chr5 (334-506)||(6803528-6803699)
chr5 (373-506)||(4031903-4032038)
chr5 (369-506)||(4032928-4033065)
chr5 (291-399)||(8447077-8447185)
chr5 (334-392)||(6802017-6802075)
chr5 (79-174)||(30213403-30213498)
chr5 (59-164)||(40172584-40172692)
chr5 (370-403)||(8447096-8447129)
chr5 (435-505)||(42962162-42962232)
chr5 (373-421)||(3944702-3944750)
chr5 (374-402)||(35952503-35952531)
[»] scaffold0878 (2 HSPs)
scaffold0878 (289-501)||(2934-3147)
scaffold0878 (370-506)||(1848-1983)
[»] chr2 (23 HSPs)
chr2 (288-501)||(27892244-27892457)
chr2 (330-506)||(16602764-16602940)
chr2 (289-506)||(27891104-27891321)
chr2 (330-506)||(38243858-38244034)
chr2 (330-489)||(23833007-23833165)
chr2 (293-468)||(26388220-26388395)
chr2 (351-506)||(38242943-38243095)
chr2 (290-403)||(16604195-16604308)
chr2 (288-381)||(23833898-23833991)
chr2 (330-399)||(43814560-43814629)
chr2 (434-505)||(5033602-5033673)
chr2 (330-379)||(5033517-5033566)
chr2 (330-379)||(15496084-15496133)
chr2 (334-379)||(5034846-5034891)
chr2 (434-501)||(5034743-5034810)
chr2 (434-501)||(12365929-12365996)
chr2 (455-506)||(16604112-16604163)
chr2 (374-403)||(5033501-5033530)
chr2 (370-403)||(16602744-16602777)
chr2 (370-403)||(19577392-19577425)
chr2 (370-399)||(23833940-23833969)
chr2 (99-171)||(43631967-43632040)
chr2 (370-398)||(43814540-43814568)
[»] scaffold0141 (2 HSPs)
scaffold0141 (291-492)||(31033-31234)
scaffold0141 (291-492)||(35202-35403)
[»] scaffold0049 (2 HSPs)
scaffold0049 (291-492)||(79409-79610)
scaffold0049 (291-492)||(83578-83779)
[»] scaffold1425 (2 HSPs)
scaffold1425 (290-506)||(1504-1720)
scaffold1425 (289-501)||(132-343)
[»] scaffold0018 (1 HSPs)
scaffold0018 (291-501)||(25252-25463)
[»] scaffold0026 (3 HSPs)
scaffold0026 (286-397)||(104296-104407)
scaffold0026 (445-506)||(104405-104466)
scaffold0026 (370-403)||(104320-104353)
[»] scaffold0349 (1 HSPs)
scaffold0349 (394-497)||(9261-9363)
[»] scaffold0171 (1 HSPs)
scaffold0171 (451-496)||(29122-29167)
[»] scaffold1594 (1 HSPs)
scaffold1594 (63-147)||(260-344)
[»] scaffold1549 (1 HSPs)
scaffold1549 (63-147)||(1252-1336)


Alignment Details
Target: chr4 (Bit Score: 140; Significance: 4e-73; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 59 - 290
Target Start/End: Complemental strand, 50745352 - 50745104
Alignment:
Q  59 gaaaatgttaaggttaatttgaaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaatttttgtgttaaaatacaatagcggatc 158  Q
    ||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||| |||| |||||||||||||||||| |||||    
T  50745352 gaaaatgttaaggctaatttgaaatccccaaaatgccttcaaaacagttttgaaagtagggtcaatttgggatttatgtgttaaaatacaatagtggatc 50745253  T
Q  159 cgaatccgctacccgc--------gaactgct---------ggagcagtcgctaacctaagttgctcggctcggctcctaccattacttgccactcagct 241  Q
    ||||||||||||||||        ||||||||         ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||    
T  50745252 cgaatccgctacccgcctacacgcgaactgctatagctgctggagcagtcgctaacctgagttgctcggcccggctcctaccattacttgccactcggct 50745153  T
Q  242 acaccactatatcgcgctgttgactactctggccataatatacaattta 290  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  50745152 acaccactatatcgtgctattgactactctggccataatatacaattta 50745104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 59 - 290
Target Start/End: Original strand, 18123751 - 18123999
Alignment:
Q  59 gaaaatgttaaggttaatttgaaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaatttttgtgttaaaatacaatagcggatc 158  Q
    |||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  18123751 gaaaatgttagggttaatttgaaatccccaaaatgccctcaaaacagttttgaaagtagggtcaatttgggatttatgtgttaaaatacaatagcggatc 18123850  T
Q  159 cgaatccgctacc--------cgcgaa---------ctgctggagcagtcgctaacctaagttgctcggctcggctcctaccattacttgccactcagct 241  Q
    |||||||||||||        ||||||         |||||||||||||||||||||| |||||||||| |||||||||||||||||||  ||||| |||    
T  18123851 cgaatccgctacccgcctacacgcgaactgctatagctgctggagcagtcgctaacctgagttgctcggatcggctcctaccattactttgcactcggct 18123950  T
Q  242 acaccactatatcgcgctgttgactactctggccataatatacaattta 290  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  18123951 acaccactatattgcgctattgactactctgaccataatatacaattta 18123999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 288 - 506
Target Start/End: Original strand, 22621864 - 22622082
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    |||||||||||||||||||| ||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| |||||| |||||||||||    
T  22621864 ttaggcttaattgatctgccagtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctttacttatttctt 22621963  T
Q  388 ttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacct 487  Q
    |||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||| |||||||||||||||||||||||||| |||||     
T  22621964 ttattcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccgacaccg 22622063  T
Q  488 aatttatttactttcttct 506  Q
    |||||||||||||||||||    
T  22622064 aatttatttactttcttct 22622082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 291 - 506
Target Start/End: Original strand, 10802889 - 10803104
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    |||||||||||||||||| |  |||||||||        ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  10802889 ggcttaattgatctgccgatcccttaacttatttcttttattcaatttggtcccataaattttaactttctcaaacacgtcccttaacttatttctttta 10802988  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
    ||||||||||||||||||||||||||||||| | ||       |||||||||||||||||||| | |||||||||||||| ||||||||||||||| |||    
T  10802989 ttcaatttggtccaattttgataattttaataccctaaaaaaagagaccgttggattacggaggtttatcagattttatattgtatcaccaacaccgaat 10803088  T
Q  491 ttatttactttcttct 506  Q
    ||||||||||||||||    
T  10803089 ttatttactttcttct 10803104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 291 - 506
Target Start/End: Complemental strand, 38032538 - 38032323
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  ||||| |||        |||||||||||||  |||||| ||||||||||||||||| |||||||||| ||||||||||    
T  38032538 ggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaactgatttctttta 38032439  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
    ||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  38032438 ttcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaat 38032339  T
Q  491 ttatttactttcttct 506  Q
    ||||||||||||||||    
T  38032338 ttatttactttcttct 38032323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 289 - 506
Target Start/End: Complemental strand, 7261663 - 7261446
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    |||||||||||||||| |||||  |||||||||        |||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||    
T  7261663 taggcttaattgatctaccggtcccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcccttaacttatttcttt 7261564  T
Q  389 tattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacaccta 488  Q
    ||||||||||||||||||||||||||||||||||| ||        ||||| |||||||||| || ||||| ||||||||||||||||||||||||||||    
T  7261563 tattcaatttggtccaattttgataattttaatcccctaaaaaaatagaccattggattacgaaggtctataagattttatagtgtatcaccaacaccta 7261464  T
Q  489 atttatttactttcttct 506  Q
    ||||||||||||||||||    
T  7261463 atttatttactttcttct 7261446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 34095738 - 34095562
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||       
T  34095738 attcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttgttcaatttggtccaattttgataattttaatcccctaaa 34095639  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34095638 aaaggagaccgttgaattacggaggtctatcagattttatagtgtatcacccacacctaatttatttactttcttct 34095562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 287 - 506
Target Start/End: Original strand, 38031164 - 38031383
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  ||||| |||        |||||||||||||| |||||| ||||||||||||||||| |||||||||| ||||||    
T  38031164 tttaggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttct 38031263  T
Q  387 tttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacc 486  Q
    |||||||||||||||||||||||||||||||||||||  |        ||||||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  38031264 tttattcaatttggtccaattttgataattttaatcccataaaaaaaaagaccgttgaattacggaggtctatcagattttatagtgtatcatcaacacc 38031363  T
Q  487 taatttatttactttcttct 506  Q
    ||||||||||||||||||||    
T  38031364 taatttatttactttcttct 38031383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 22623222 - 22623046
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||       
T  22623222 attcaatttggtcccataagtcttaactttctcaagcacgtccctttacttatttcttttattcaatttggtccaattttgataattttaatcccctaca 22623123  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        |||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  22623122 aaaagagaccgttggattacggaggtctatcagattttataatgtatcaccaacatctaatttatttactctcttct 22623046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 8815436 - 8815260
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||       
T  8815436 attcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttctattcaaattggtccaattttgataattttaatcctctaaa 8815337  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
         | ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8815336 aaaaaaaaccgttggattacggaggtctatcagattttatagtgtatcaccaacaccaaatttatttactttcttct 8815260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 289 - 505
Target Start/End: Complemental strand, 10804315 - 10804099
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||||||  |||||||||        |||||||||||||| ||||||||||||||||| ||| |  | |||||||||||||||||    
T  10804315 taggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataagttttaactttcttaaataagttccttaacttatttcttt 10804216  T
Q  389 tattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacaccta 488  Q
    ||||||||||||| ||||||||||||||||||||||||        ||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||    
T  10804215 tattcaatttggttcaattttgataattttaatccactaaaaaaaaagaccgttggattacggaggtctatcagattttacagtgtatcatcaacgccta 10804116  T
Q  489 atttatttactttcttc 505  Q
    |||||||||||||||||    
T  10804115 atttatttactttcttc 10804099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 290 - 506
Target Start/End: Original strand, 17356360 - 17356576
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||| ||||  |||||||||        |||||||||| | ||| || | ||||||||||||||||| ||||||||||||||||||||    
T  17356360 aggcttaattgatctgtcggtcccttaacttatttcttttattcaatttgatgccagaaatcttaactttctcaaacacgtcccttaacttatttctttt 17356459  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    |||||||||| ||||||||||||||||||||||| ||       |||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  17356460 attcaatttgttccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctag 17356559  T
Q  490 tttatttactttcttct 506  Q
    || ||||||||||||||    
T  17356560 ttcatttactttcttct 17356576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 292 - 506
Target Start/End: Complemental strand, 23758088 - 23757873
Alignment:
Q  292 gcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttat 391  Q
    ||||||||||||||||||||  |||| |||        ||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23758088 gcttaattgatctgccggttctttaatttatttcttttattcaatttagtctcataagttttaactttctcaaacacgtcccttaacttatttcttttat 23757989  T
Q  392 tcaa-tttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
    | || |||| ||||||||||||||||||||||| |        |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||    
T  23757988 taaattttgatccaattttgataattttaatcctccaaaaaaagagaccgttgaattacggaggtctatcagattttatggtgtatcaccaacacctaat 23757889  T
Q  491 ttatttactttcttct 506  Q
    ||||||||||||||||    
T  23757888 ttatttactttcttct 23757873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 5433486 - 5433310
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||||||||| |||||||||||||||||||||||  | ||||||||||||| |||||||||||||  ||||||||||||||||||||| | ||       
T  5433486 attcaatttggtcctataagttttaactttctcaaacatgtgccttaacttatttattttattcaatttactccaattttgataattttaataccctaaa 5433387  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        ||||| |||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||    
T  5433386 aattgagactgttgtattacggaggtctatcagattttataatgtatcacaaacacctaatttatttaatttcttct 5433310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 290 - 506
Target Start/End: Original strand, 18091579 - 18091795
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    ||||||||||||||||||| |  |||||||||        ||| ||||||||  ||||||| |||||||||||||| || ||| ||||||||| | ||||    
T  18091579 aggcttaattgatctgccgatcccttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaaaacgtccattaacttatctatttt 18091678  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    ||||||||| |||||||||||||||||||||||   |       |||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||    
T  18091679 attcaatttagtccaattttgataattttaatctcttaaaaaatgagaccgttgaattacagaggtctatcagattttatagtgtatcaccaacacctaa 18091778  T
Q  490 tttatttactttcttct 506  Q
    |||||||||||||||||    
T  18091779 tttatttactttcttct 18091795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 294 - 494
Target Start/End: Complemental strand, 17357978 - 17357778
Alignment:
Q  294 ttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattc 393  Q
    |||||||||||||||||  |||||||||        |||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  17357978 ttaattgatctgccggtcccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacacgtcccttaacttatttcttttattc 17357879  T
Q  394 aatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaattta 493  Q
    ||| || ||||||||||||||||||||||  ||       |||||||||| ||||||||| |||| ||||||||||| ||||||| ||| || |||||||    
T  17357878 aatatgatccaattttgataattttaatctcctgaaaaaagagaccgttgaattacggaggtctaccagattttataatgtatcagcaatacttaattta 17357779  T
Q  494 t 494  Q
    |    
T  17357778 t 17357778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 330 - 497
Target Start/End: Original strand, 8814174 - 8814340
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||| ||||||||| | ||| ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||       
T  8814174 attcaatttagtcccataaatcttatctttctcaaacatgtcccttaacttatttcttttattcaatttggtcgaattttgataattttaataccctaaa 8814273  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttattta 497  Q
         |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  8814274 aaat-agactgttggattacggaggtctatcagattttatagtgtaacaccaacacctaatttattta 8814340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 330 - 501
Target Start/End: Original strand, 48499403 - 48499573
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||||||||| | |||||||| |||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||       
T  48499403 attcaatttggtcccataattcttaactttttcaaacatgtcccttaacttatttattttattcaatttggtccaattttgataattttaatcccctaaa 48499502  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttacttt 501  Q
        |||| ||||||||||| ||| ||||||||||||||  |||||||||||||| ||||||| ||||||||    
T  48499503 aaaagagatcgttggattacagaggtctatcagattttacggtgtatcaccaacatctaattt-tttacttt 48499573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 56235099 - 56234924
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||||| || ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| |||| |||||||||| ||||||||| ||       
T  56235099 attcaatttgatctcataagtcttaactttatcaaacacaccccttaacttatttcttttattcaattcggtctaattttgatacttttaatcctctaaa 56235000  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
         |||||  || |||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  56234999 aaac-agaccaatgaattacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttct 56234924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 48501402 - 48501227
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||| |||  ||||| | ||||||||||||||||  ||| ||||||||||||||||||||||||||||| |||||| ||| ||||||||| ||       
T  48501402 attcaattaggtttcataattcttaactttctcaaacatgtcctttaacttatttcttttattcaatttggtctaattttaata-ttttaatcccctaaa 48501304  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        ||||||||| |||||||||| ||| ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  48501303 aaaagagaccgttagattacggaggtctgtcagattttattgtgtatcatcaacacctaatttatttactttcttct 48501227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 330 - 465
Target Start/End: Complemental strand, 35193275 - 35193140
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||| |||||   ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||       
T  35193275 attcaatttggtctcataaaacttaactttctcaaacacgtcctttaacttatttcttttattcaatttggtccatttttgataattttaatcccctaga 35193176  T
Q  430 nnnngagaccgttggattacggagatctatcagatt 465  Q
        |||||||||||||||||||| |||||||||||    
T  35193175 aaaagagaccgttggattacggaggtctatcagatt 35193140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 330 - 496
Target Start/End: Original strand, 35191856 - 35192019
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||  ||||||| ||||||||||||||||| | | ||||||||||||||||||||||||| || ||||||||||||||||||||| ||       
T  35191856 attcaatttggtttcataagtcttaactttctcaaacacgttcattaacttatttcttttattcaatttagttcaattttgataattttaatcccctaaa 35191955  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttattt 496  Q
        |||| ||||||||||||||  ||||||| ||||||||||||   |||| ||||||||||||||    
T  35191956 aaaagagaacgttggattacggaagtctatcaaattttatagtgt---accaccacctaatttattt 35192019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 330 - 423
Target Start/End: Original strand, 56233763 - 56233856
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatcc 423  Q
    ||||||||||||| ||||||| | ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56233763 attcaatttggtcgcataagtctcaactttctcaaacatgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatcc 56233856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 392 - 506
Target Start/End: Original strand, 35925792 - 35925906
Alignment:
Q  392 tcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatt 491  Q
    |||||||| || |||||||||||||||||||  ||        |||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  35925792 tcaatttgatcaaattttgataattttaatcttctaaaaaaaaagactgttggattacggagatctatcagattttatagtgtatcgtcaacacctaatt 35925891  T
Q  492 tatttactttcttct 506  Q
    |||||||||||||||    
T  35925892 tatttactttcttct 35925906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 392 - 506
Target Start/End: Complemental strand, 35927133 - 35927019
Alignment:
Q  392 tcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatt 491  Q
    |||||||| ||||||||||||||||||||||  ||        ||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||    
T  35927133 tcaatttgatccaattttgataattttaatctcctaaaaaaaaagatcgttggattacgaaggtctaccagattttatagtgtatcaccaacacctaatt 35927034  T
Q  492 tatttactttcttct 506  Q
    |||||||||||||||    
T  35927033 tatttactttcttct 35927019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 330 - 502
Target Start/End: Complemental strand, 36074873 - 36074701
Alignment:
Q  330 attcaatttggtcccataagttttaact-ttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttg-ataattttaatccactn 427  Q
    ||||||||| ||||||||| |||||||| ||||||| ||| | ||||||||||||| ||||||||||||||||| ||||||  ||| ||||||||   |     
T  36074873 attcaatttagtcccataaattttaactcttctcaagcacgttccttaacttattttttttattcaatttggtctaattttttatatttttaatctcata 36074774  T
Q  428 nnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttc 502  Q
           ||| |||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  36074773 aaaaa--agatcgttggattacgaaggtctatcatattttatagtgtatcaccaacacctaatttatttaatttc 36074701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 289 - 379
Target Start/End: Complemental strand, 48463104 - 48463014
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||||| |||  |||||||||        ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48463104 taggcttaattgatctgctggtcccttaacttatttcttttattcaatttggtctcataagttttaactttctcaaacacatcccttaact 48463014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 288 - 384
Target Start/End: Complemental strand, 34122923 - 34122827
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttattt 384  Q
    |||||||||||||||||| ||||  |||||||||        ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  34122923 ttaggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaacacatcccttaactcattt 34122827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 434 - 506
Target Start/End: Complemental strand, 48081355 - 48081283
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    |||||||||||||| | || |||||| ||| |||||| |||||||||||||||||||||||||||||||||||    
T  48081355 gagaccgttggattccagatatctatgagagtttatactgtatcaccaacacctaatttatttactttcttct 48081283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 48081669 - 48081597
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||| |||||||| |||||||| ||||| |  |||||||||||||||||||||||||||||||||    
T  48081669 attcaatttggttccataagtcttaactttttcaaatatgtcccttaacttatttcttttattcaatttggtc 48081597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 434 - 505
Target Start/End: Complemental strand, 34122796 - 34122725
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||| |||||||| | ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  34122796 gagaacgttggataagggagatctatcagatcttatagtgtatcaccaacacttgatttatttactttcttc 34122725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 440 - 506
Target Start/End: Complemental strand, 48081536 - 48081470
Alignment:
Q  440 gttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    |||||||| ||||| ||| ||||| |||||| |||||||||||||||||||||||||||||||||||    
T  48081536 gttggattgcggaggtctttcagagtttataatgtatcaccaacacctaatttatttactttcttct 48081470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 434 - 505
Target Start/End: Complemental strand, 48462978 - 48462907
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||| |||||||||| ||||||||||||||| ||||| ||||||| |||||| | |||||||||||||||||    
T  48462978 gagatcgttggattagggagatctatcagatcttatactgtatcatcaacacatgatttatttactttcttc 48462907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 379
Target Start/End: Original strand, 34121298 - 34121387
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||||||||  ||||| |||        ||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  34121298 aggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtctcataagtcttaactttctcaaacacatcacttaact 34121387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 397
Target Start/End: Original strand, 48080267 - 48080376
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    |||||||||||||||||| ||||  |||||||||        ||| ||||||||  ||||||| |||||||||||||||   ||| ||||||||||||||    
T  48080267 ttaggcttaattgatctgtcggtcacttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaacttgtcctttaacttatttctt 48080366  T
Q  388 ttattcaatt 397  Q
    ||||||||||    
T  48080367 ttattcaatt 48080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 387
Target Start/End: Complemental strand, 48081609 - 48081552
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||| |||||||||    
T  48081609 attcaatttggtctcataagtcttaactttctcaaacacgtcccttaagttatttctt 48081552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 461 - 506
Target Start/End: Original strand, 56233878 - 56233923
Alignment:
Q  461 agattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  56233878 agattttatagtgtatcgccaacacctaatttatttactttcttct 56233923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 30496002 - 30495887
Alignment:
Q  59 gaaaatgttaaggttaatttgaaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaatttttgtgttaaaatacaatagcggatc 158  Q
    |||| ||||| |||||||  |||||||||| | || ||| |||| |||||| ||| |||||||||||||| |||||  ||||||||||||||||  |||     
T  30496002 gaaattgttagggttaatccgaaatccccagagtgtccttaaaacagttttaaaattagggtcaatttgggattttcctgttaaaatacaatagtagata 30495903  T
Q  159 cgaatccgctacccgc 174  Q
     ||||||| |||||||    
T  30495902 agaatccgatacccgc 30495887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 403
Target Start/End: Complemental strand, 34122901 - 34122868
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||||||    
T  34122901 tcccttaacttatttcttttattcaatttggtcc 34122868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 441 - 502
Target Start/End: Original strand, 48462272 - 48462333
Alignment:
Q  441 ttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttc 502  Q
    |||||| | |||||||||||| || |||||||||||||||||||  | ||||||||||||||    
T  48462272 ttggataagggagatctatcatatcttatagtgtatcaccaacatttgatttatttactttc 48462333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 48463083 - 48463051
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||||||    
T  48463083 tcccttaacttatttcttttattcaatttggtc 48463051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 402
Target Start/End: Original strand, 56233743 - 56233775
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||||||    
T  56233743 tcccttaacttatttcttttattcaatttggtc 56233775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 401
Target Start/End: Original strand, 35191836 - 35191867
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggt 401  Q
    ||||||||||||||||||||||||||||||||    
T  35191836 tcccttaacttatttcttttattcaatttggt 35191867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 403
Target Start/End: Original strand, 48499385 - 48499416
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||||    
T  48499385 ccttaacttatttcttttattcaatttggtcc 48499416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 505
Target Start/End: Original strand, 34121428 - 34121494
Alignment:
Q  439 cgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||||||| | ||||||||||||||  ||| |||||||||||||||  | |||||||||| ||||||    
T  34121428 cgttggatgagggagatctatcagagcttacagtgtatcaccaacatttgatttatttacattcttc 34121494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 403
Target Start/End: Complemental strand, 5433502 - 5433473
Alignment:
Q  374 ttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||    
T  5433502 ttaacttatttcttttattcaatttggtcc 5433473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 403
Target Start/End: Original strand, 8814154 - 8814187
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||| ||||    
T  8814154 tcccttaacttatttcttttattcaatttagtcc 8814187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 403
Target Start/End: Complemental strand, 48081426 - 48081393
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    |||||||||||||| |||||||||||||||||||    
T  48081426 tcccttaacttattccttttattcaatttggtcc 48081393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 402
Target Start/End: Complemental strand, 8815452 - 8815424
Alignment:
Q  374 ttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||    
T  8815452 ttaacttatttcttttattcaatttggtc 8815424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 34095758 - 34095726
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||||| |||||||||||||||||    
T  34095758 tcccttaacttattttttttattcaatttggtc 34095726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Original strand, 34121318 - 34121350
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||| ||||||||||||||||||||||||    
T  34121318 tcccttaatttatttcttttattcaatttggtc 34121350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 35193295 - 35193263
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||| ||||||||||||||||||||||||    
T  35193295 tcccttaatttatttcttttattcaatttggtc 35193263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 1e-70; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 59 - 290
Target Start/End: Original strand, 4359854 - 4360102
Alignment:
Q  59 gaaaatgttaaggttaatttgaaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaatttttgtgttaaaatacaatagcggatc 158  Q
    |||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  4359854 gaaaatgttagggttaatttgaaatccccaaaatgccctcaaaacagttttgaaagtagggtcaatttgggatttatgtgttaaaatacaatagcggatc 4359953  T
Q  159 cgaatccgctacc--------cgcgaa---------ctgctggagcagtcgctaacctaagttgctcggctcggctcctaccattacttgccactcagct 241  Q
    |||||||||||||        ||||||         |||||||||||||||||||||| |||||||||| |||||||||||||||||||  ||||| |||    
T  4359954 cgaatccgctacccgcctacacgcgaactgctatagctgctggagcagtcgctaacctgagttgctcggatcggctcctaccattactttgcactcggct 4360053  T
Q  242 acaccactatatcgcgctgttgactactctggccataatatacaattta 290  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  4360054 acaccactatattgcgctattgactactctgaccataatatacaattta 4360102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 287 - 506
Target Start/End: Complemental strand, 28777809 - 28777590
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  ||||| |||        |||||||||||||| |||||| ||||||||||||||||| |||||||||| ||||||    
T  28777809 tttaggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttct 28777710  T
Q  387 tttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacc 486  Q
    ||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  28777709 tttattcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacc 28777610  T
Q  487 taatttatttactttcttct 506  Q
    ||||||||||||||||||||    
T  28777609 taatttatttactttcttct 28777590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 290 - 506
Target Start/End: Original strand, 31937034 - 31937250
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||  |||||||||        ||||||||||||||||||||| ||||||||||||||||| |||||| |||||||| ||||    
T  31937034 aggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttcacttatttatttt 31937133  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    ||||| |||||||||||||||||||||||||||| ||       |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31937134 attcattttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaa 31937233  T
Q  490 tttatttactttcttct 506  Q
    ||| |||||||||||||    
T  31937234 tttttttactttcttct 31937250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 293 - 506
Target Start/End: Complemental strand, 43394170 - 43393956
Alignment:
Q  293 cttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttattt-cttttat 391  Q
    ||||||||||||||||||  |||||||||        ||||||||||||| ||||||| |||||||||||||| || ||||||||||||||| |||||||    
T  43394170 cttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaagacgtcccttaacttattttcttttat 43394071  T
Q  392 tcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatt 491  Q
    |||| |||||||||||||||||||||||| || ||       |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  43394070 tcaaattggtccaattttgataattttaaccccctaaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaatt 43393971  T
Q  492 tatttactttcttct 506  Q
    |||||||||||||||    
T  43393970 tatttactttcttct 43393956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 47431266 - 47431090
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||| |||||||||||||||| |||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||       
T  47431266 attcaatttggtctcataagttttaactttttcaaacacgttccttaacttatttcttttgttcaatttggtccaattttgataattttaatcccctaaa 47431167  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        ||||||||||||||| |||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  47431166 aaaagagaccgttggattatggaggtctattagattttatagtgtatcacccacacctaatttatttactttcttct 47431090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 291 - 501
Target Start/End: Complemental strand, 31938425 - 31938216
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  31938425 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttctttta 31938326  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
    |||||||| |||||||||| ||||||||||||| ||       ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||    
T  31938325 ttcaatttagtccaattttaataattttaatcccctaaaaaaagagaccgttggattacgaaggtctataagattttatagtgtatcaccaacacctaat 31938226  T
Q  491 ttatttacttt 501  Q
    || ||||||||    
T  31938225 tt-tttacttt 31938216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 292 - 506
Target Start/End: Complemental strand, 35759348 - 35759134
Alignment:
Q  292 gcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttat 391  Q
    |||||||||||||||||||  |||||||||        ||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  35759348 gcttaattgatctgccggtcccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaatttatttcttttat 35759249  T
Q  392 tcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatt 491  Q
    ||||||||||||||||||||||||||||||| |          |||||||||||||||| |  |||||||||||||| ||||||||||||||||||||||    
T  35759248 tcaatttggtccaattttgataattttaatctaaaaaaaaaacagaccgttggattacgaatgtctatcagattttacagtgtatcaccaacacctaatt 35759149  T
Q  492 tatttactttcttct 506  Q
    |||||||||||||||    
T  35759148 tatttactttcttct 35759134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 289 - 506
Target Start/End: Original strand, 17116200 - 17116416
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    |||||||||||||||||||| |  |||||||||        ||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||||||    
T  17116200 taggcttaattgatctgccgatcccttaacttatttcttttattcaatttggtctcataagtgttaagtttctcaaacacgtcccttaacttatttcttt 17116299  T
Q  389 tattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacaccta 488  Q
    ||||||||||||| ||||||||||||||||||||| ||       || ||||||||||||||||| || |||||| ||||||||||||||||||||||||    
T  17116300 tattcaatttggttcaattttgataattttaatcc-ctaaaaaatgacaccgttggattacggaggtccatcagagtttatagtgtatcaccaacaccta 17116398  T
Q  489 atttatttactttcttct 506  Q
    ||||||| ||||||||||    
T  17116399 atttattcactttcttct 17116416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 330 - 506
Target Start/End: Original strand, 46902370 - 46902546
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||       
T  46902370 attcaatttggtcccataaatcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtgcaattttgataattttaatcccctaaa 46902469  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        ||||  ||| |||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  46902470 agaagagattgttagattacggaggtctatcagattttatagtgtatcactaacaccaaatttatttactttcttct 46902546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 330 - 506
Target Start/End: Original strand, 55209821 - 55209996
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||        
T  55209821 attcaatttggttccataagttttaactttctcaaacacgtcccttaatttatttcttttatttaatttggtccaattttgataattttaatccac-gaa 55209919  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        |||||| ||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||| ||||    
T  55209920 aaaagagaccattggattacggaggtctatcagaatttatagtgtattaccaacacctaatttatttactttattct 55209996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 291 - 506
Target Start/End: Complemental strand, 2233423 - 2233208
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||| ||||  |||||||||        |||||||| |||| ||||||| |||||||| |||||||  |||||||||||||||||||||    
T  2233423 ggcttaattgatctgtcggtcccttaacttatttcttttattcaattcggtctcataagtcttaactttgtcaaacatgtcccttaacttatttctttta 2233324  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
    ||||||||||||||||||||||||||||||||| ||       |||| |||||||||| |||||||||| ||||||||||| ||||||||||||||||||    
T  2233323 ttcaatttggtccaattttgataattttaatcctctaaaaaaagagatcgttggattatggagatctataagattttatagcgtatcaccaacacctaat 2233224  T
Q  491 ttatttactttcttct 506  Q
    ||| ||||||||||||    
T  2233223 ttaattactttcttct 2233208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 330 - 506
Target Start/End: Original strand, 28776487 - 28776663
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||||| ||| |||| | |||| |||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||       
T  28776487 attcaatttgatcctataaatcttaattttctcaaacaagtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctaaa 28776586  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        |||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  28776587 aacagagaccgttggattacggaggtctatcagattttataatgtatcatcaacacctaatttatttactttcttct 28776663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 46903703 - 46903527
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||||||||| | |||| ||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||| |||||||||| ||       
T  46903703 attcaatttggtcccataaatcttaagtttttcaaacacgtcctttaacttatttcttttattcaatttggtacaattttgatgattttaatcccctaaa 46903604  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
         ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46903603 aaaaaagaccgttggattacggaggtctattagattttatagtgtatcaccaacacctaatttatttactttcttct 46903527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 330 - 505
Target Start/End: Complemental strand, 21729267 - 21729092
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||       
T  21729267 attcaatttagtcccataagttctaactttctcaaacacgtcccttaacttatttcttttattcaatttgattcaattttgataattttaatcctctaaa 21729168  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
        |||||| |||||||| | || |||| || |||||||||||||||| ||||||||||||||||||||||||||    
T  21729167 aaatgagaccattggattatgaaggtctaccatattttatagtgtatcatcaacacctaatttatttactttcttc 21729092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 352 - 506
Target Start/End: Original strand, 17740891 - 17741045
Alignment:
Q  352 ttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacgg 451  Q
    ||||||||||||||||  ||||||||||||||||||||||| |||||| |||||||||||||||||||||||  |       |||||||| |||||||||    
T  17740891 ttaactttctcaaacatgtcccttaacttatttcttttattaaatttgatccaattttgataattttaatcctttaaaaatagagaccgtcggattacgg 17740990  T
Q  452 agatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17740991 aggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 17741045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 352 - 506
Target Start/End: Original strand, 19042211 - 19042365
Alignment:
Q  352 ttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacgg 451  Q
    ||||||||||||||||  ||||||||||||||||||||||| |||||| |||||||||||||||||||||||  |       |||||||| |||||||||    
T  19042211 ttaactttctcaaacatgtcccttaacttatttcttttattaaatttgatccaattttgataattttaatcctttaaaaatagagaccgtcggattacgg 19042310  T
Q  452 agatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19042311 aggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 19042365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 357 - 506
Target Start/End: Original strand, 5689785 - 5689934
Alignment:
Q  357 tttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatc 456  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |       |||||||||||||||||||| ||    
T  5689785 tttcccaaacacgtcccttaacttatttcttttattaaatttggtccaattttgataattttaatcctttaaaacaagagaccgttggattacggaggtc 5689884  T
Q  457 tatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5689885 tatcagattttatagtgtatcaccaacacttaatttatttactttcttct 5689934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 289 - 506
Target Start/End: Original strand, 52521925 - 52522141
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    |||| ||||||||||||| |||  |||||||||        ||||||||||||| ||||  | ||||||||||||||||| ||| || |||||||| |||    
T  52521925 taggtttaattgatctgctggtcccttaacttatttctttaattcaatttggtctcatagatcttaactttctcaaacacgtcctttcacttatttattt 52522024  T
Q  389 tattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacaccta 488  Q
    |||||||||||||||||||||||||| |||||||| ||        |||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  52522025 tattcaatttggtccaattttgataactttaatcccctaaaaaaa-agacagttggattacggaggtctatcagattttatagtgtatcaccaacaccta 52522123  T
Q  489 atttatttactttcttct 506  Q
    ||||||||||||||||||    
T  52522124 atttatttactttcttct 52522141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 290 - 506
Target Start/End: Complemental strand, 23073493 - 23073277
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||   ||||||||        ||||||||||||||||||| | |||||||||||||| |  ||||||||||||||||||||    
T  23073493 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaagatgtcccttaacttatttctttt 23073394  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    ||||||  |||| ||||||||||||||||||||| ||       |||||||||| ||||||||| | ||||| ||||||  |||||||||||||||||||    
T  23073393 attcaaactggttcaattttgataattttaatcccctaaaaaaagagaccgttgaattacggaggtgtatcaaattttacggtgtatcaccaacacctaa 23073294  T
Q  490 tttatttactttcttct 506  Q
    |||||||||||||||||    
T  23073293 tttatttactttcttct 23073277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 288 - 492
Target Start/End: Complemental strand, 54354512 - 54354308
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    |||||||||||||||||||||||  |||||| ||        ||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||    
T  54354512 ttaggcttaattgatctgccggtcccttaacctatttcttttatttaatttggtcccttaagtcttaactttctcaaacacgtcccttaacttatttctt 54354413  T
Q  388 ttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacct 487  Q
    | |||||||||||||||||||||||||||||||| | ||       |||||| ||||||||  ||| |||||||||||||| ||||||||||||||||||    
T  54354412 tgattcaatttggtccaattttgataattttaattccctataaaaagagaccattggattatagaggtctatcagattttacagtgtatcaccaacacct 54354313  T
Q  488 aattt 492  Q
    |||||    
T  54354312 aattt 54354308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 292 - 506
Target Start/End: Original strand, 37609322 - 37609536
Alignment:
Q  292 gcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttat 391  Q
    |||||||||||||||||||   ||||||||        ||| |||||||||  |||||| ||||||||||||||||| ||||| ||||||||||||||||    
T  37609322 gcttaattgatctgccggtcctttaacttatttcttttatttaatttggtcatataagtcttaactttctcaaacacgtccctcaacttatttcttttat 37609421  T
Q  392 tcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatt 491  Q
    |||||||| ||||||||| ||||||||||||| ||       ||||||||||||||| |||| ||||| |||||| ||||||| ||| ||||||||||||    
T  37609422 tcaatttgatccaattttaataattttaatcccctaaaaaaagagaccgttggattagggaggtctataagatttaatagtgtctcatcaacacctaatt 37609521  T
Q  492 tatttactttcttct 506  Q
    |||||||||||||||    
T  37609522 tatttactttcttct 37609536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 330 - 490
Target Start/End: Complemental strand, 17742372 - 17742211
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||       
T  17742372 attcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttgatccaattttgataattttaatcccctaaa 17742273  T
Q  430 nnnngagaccgttggattacggagatctatcagattt-tatagtgtatcaccaacacctaat 490  Q
        |||||||||||||||||||| |||||||||||| || ||||||||| |||||||||||    
T  17742272 aaaagagaccgttggattacggaggtctatcagatttatacagtgtatcaacaacacctaat 17742211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 330 - 490
Target Start/End: Complemental strand, 19043692 - 19043531
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||       
T  19043692 attcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttgatccaattttgataattttaatcccctaaa 19043593  T
Q  430 nnnngagaccgttggattacggagatctatcagattt-tatagtgtatcaccaacacctaat 490  Q
        |||||||||||||||||||| |||||||||||| || ||||||||| |||||||||||    
T  19043592 aaaagagaccgttggattacggaggtctatcagatttatacagtgtatcaacaacacctaat 19043531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 374 - 506
Target Start/End: Complemental strand, 37610798 - 37610666
Alignment:
Q  374 ttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtg 473  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||||| |||||||||||||||||||    
T  37610798 ttaacttattttttttattcaatttggtccaattttgataattttaatcccctaaaaaaaaagaccgttggattacggaggtctatcagattttatagtg 37610699  T
Q  474 tatcaccaacacctaatttatttactttcttct 506  Q
    |||||||||||||||||||||||||||||||||    
T  37610698 tatcaccaacacctaatttatttactttcttct 37610666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 290 - 504
Target Start/End: Original strand, 2232601 - 2232815
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    ||||||||||||||||||| |  |||||||||        ||||||||||||| ||||||| |||||||||||||| || |||||||| |||||||||||    
T  2232601 aggcttaattgatctgccgatcccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaatacgtcccttaatttatttctttt 2232700  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    |||||||||  ||||||||| ||||||||||||| ||        ||||| ||||||||||||| ||||| ||||||||  |||||||| ||||||||||    
T  2232701 attcaatttaatccaattttaataattttaatcccctagaaaaaaagaccattggattacggaggtctatgagattttacggtgtatcagcaacacctaa 2232800  T
Q  490 tttatttactttctt 504  Q
    |||||||||||||||    
T  2232801 tttatttactttctt 2232815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 289 - 506
Target Start/End: Original strand, 21727908 - 21728125
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||||||  | |||||||        ||||||||||||| ||||||| ||||||||||||||||  |||||||||||||||||||    
T  21727908 taggcttaattgatctgccggtcccataacttatttcttttattcaatttggtctcataagtcttaactttctcaaacatgtcccttaacttatttcttt 21728007  T
Q  389 tattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacaccta 488  Q
    ||||||||||| | ||||||||||||||||||||  ||        |||| ||| ||||||| || ||||||  |||||||| |||||||||||||||||    
T  21728008 tattcaatttgattcaattttgataattttaatctcctaaaaaagtagactgttagattacgaaggtctatctcattttataatgtatcaccaacaccta 21728107  T
Q  489 atttatttactttcttct 506  Q
    |||||||||| |||||||    
T  21728108 atttatttaccttcttct 21728125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 330 - 495
Target Start/End: Complemental strand, 53180883 - 53180718
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||||| || |||||||  |||||||||||||||| | | ||||||||||| ||||||||||||| |||||||||| ||||||||||||| ||       
T  53180883 attcaatttgatctcataagtcgtaactttctcaaacacgttctttaacttattttttttattcaatttagtccaattttaataattttaatcctctaaa 53180784  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatt 495  Q
        |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  53180783 aaaggagaccgttggattacggaggtctatcagattgtatagtgtatcaccaacacctaatttatt 53180718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 294 - 490
Target Start/End: Complemental strand, 5691209 - 5691014
Alignment:
Q  294 ttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattc 393  Q
    |||||||||||||||||  |||||||||        ||||||||| ||| ||||||| |||| |||||||||||| |||||||||||||||||||||||     
T  5691209 ttaattgatctgccggtcccttaacttatttcttttattcaatttagtcacataagtcttaattttctcaaacacgtcccttaacttatttcttttatta 5691110  T
Q  394 aatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
    || ||| ||||||||||||||||| ||||| ||       |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  5691109 aacttg-tccaattttgataatttaaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaat 5691014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 52525438 - 52525263
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||       
T  52525438 attcaatttggtctcataagtcttaactttctcaaacacatcccttaacttatttcttttattcaatttagtccaattttaataattttaatcccctaaa 52525339  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        ||||||||||||||| | || |  || |||||||||| ||| ||||||||| ||||||| |||||||||||||    
T  52525338 aaaagagaccgttggattatgaaggttaataagattttataatgtgtcaccaacatctaattt-tttactttcttct 52525263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 290 - 506
Target Start/End: Complemental strand, 11348590 - 11348375
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| |||||||| ||| |||  | |||||||| |||||||||    
T  11348590 aggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtattaactttatcatacatgttccttaactaatttctttt 11348491  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    ||| |||||| ||||||||||||||||||||| |  |       |||||||||| ||||||||| |||||||||||||||||| ||||||| ||||||||    
T  11348490 atttaatttgatccaattttgataattttaattccttagaaaaagagaccgttgaattacggaggtctatcagattttatagtatatcacc-acacctaa 11348392  T
Q  490 tttatttactttcttct 506  Q
    || ||||||||||||||    
T  11348391 ttaatttactttcttct 11348375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 289 - 489
Target Start/End: Original strand, 54353021 - 54353221
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||| ||||   ||||||||        |||||||||| |||||||||| |||||||| |||||||  |||||||||||||||||||    
T  54353021 taggcttaattgatctgacggtcctttaacttatttcttttattcaatttgatcccataagtcttaactttatcaaacatgtcccttaacttatttcttt 54353120  T
Q  389 tattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacaccta 488  Q
    || |||||||||||||||||| ||||||||||||| |        ||||||||||||||||| || ||||||||||||||| ||||||||| ||||||||    
T  54353121 tactcaatttggtccaatttttataattttaatccccgaaaaaaagagaccgttggattacgaaggtctatcagattttatcgtgtatcactaacaccta 54353220  T
Q  489 a 489  Q
    |    
T  54353221 a 54353221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 291 - 504
Target Start/End: Complemental strand, 10979293 - 10979080
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        ||||||||||||||||||| | |||| |||||||||||| ||  || ||||||||||||||    
T  10979293 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataaatcttaaatttctcaaacacgtcatttcacttatttctttta 10979194  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
    ||||||||| | ||||||||||||||||| |||  |       |||||| ||||||||||||| | ||||| ||||||  |||||||||||||| |||||    
T  10979193 ttcaatttgattcaattttgataattttagtccctttaaaaaagagaccattggattacggaggtttatcaaattttacggtgtatcaccaacatctaat 10979094  T
Q  491 ttatttactttctt 504  Q
    ||||||||||||||    
T  10979093 ttatttactttctt 10979080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 370 - 506
Target Start/End: Original strand, 35758083 - 35758219
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttat 469  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||          | |||||||||||||| |  ||||||||||||||     
T  35758083 tcccttaacttatttcttttattcaatttggtccaattttgataattttaatccaaaaaaaaaacaaaccgttggattacgaatgtctatcagattttac 35758182  T
Q  470 agtgtatcaccaacacctaatttatttactttcttct 506  Q
    |||||||||||||||||||||||||||||||||||||    
T  35758183 agtgtatcaccaacacctaatttatttactttcttct 35758219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 334 - 505
Target Start/End: Original strand, 11346855 - 11347026
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnn 433  Q
    |||||||||  |||| | |||||||| |||||||| | |||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||           
T  11346855 aatttggtcatataaatcttaactttatcaaacacgtgccttaatttatttcttttattcaatttgttccaattttgataattttaatcccctgaaaaga 11346954  T
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||||| |||||||| | || |||| || ||| |||||||||||||||||||||||||||||||||||||||    
T  11346955 gagaccattggattatgaaggtctaccatattgtatagtgtatcaccaacacctaatttatttactttcttc 11347026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 372 - 506
Target Start/End: Complemental strand, 55210945 - 55210811
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatag 471  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||       || || |||| ||||||||||||||||||||||||||     
T  55210945 ccttaacttatttcttttattaaatttggatcaattttgataattttaatccactaaaaaaagatactgttgaattacggagatctatcagattttataa 55210846  T
Q  472 tgtatcaccaacacctaatttatttactttcttct 506  Q
    |||||||||||||| ||||||||||||||||||||    
T  55210845 tgtatcaccaacacataatttatttactttcttct 55210811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 287 - 422
Target Start/End: Original strand, 23091187 - 23091322
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    |||||||||||||||||||||||| | ||||||||        ||||||||||||| ||||||| ||||||||||||||||| || ||||||||| ||||    
T  23091187 tttaggcttaattgatctgccggtcttttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtctcttaacttaattct 23091286  T
Q  387 tttattcaatttggtccaattttgataattttaatc 422  Q
    ||||||||||||||||||| ||||||||||||||||    
T  23091287 tttattcaatttggtccaactttgataattttaatc 23091322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 292 - 499
Target Start/End: Complemental strand, 53766083 - 53765876
Alignment:
Q  292 gcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttat 391  Q
    ||||||||||||||| |||  |||||||||        |||||||||||| || ||||| |||| |||||||||||| ||||||||||||||||||||||    
T  53766083 gcttaattgatctgcgggtcccttaacttatttcttttattcaatttggttccgtaagtcttaattttctcaaacacgtcccttaacttatttcttttat 53765984  T
Q  392 tcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatt 491  Q
    |||||||| ||||||||| ||||||||||||| ||       || ||  ||||||||||||| ||||  |||||||| |||||||||||| || || |||    
T  53765983 tcaatttgatccaattttaataattttaatcccctaaaaagagaaactattggattacggaggtctacgagattttacagtgtatcaccaccatctgatt 53765884  T
Q  492 tatttact 499  Q
    ||||||||    
T  53765883 tatttact 53765876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 330 - 506
Target Start/End: Original strand, 47429666 - 47429837
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||| |||       |||||| ||||||||||||||||||||||||||||||||| ||       
T  47429666 attcaatttggtctcataagtcttaactttctcaaacacgtccttta-------tcttttgttcaatttggtccaattttgataattttaatcccctaaa 47429758  T
Q  430 nnnnga--gaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
         |  ||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  47429759 aaaaaaaagactgttggattacggaggtctattagattttatagtgtatcaccaacatctaatttatttactttcttct 47429837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 334 - 502
Target Start/End: Complemental strand, 47917687 - 47917520
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnn 433  Q
    ||||||||| ||||| | |||  |||||||||||| ||||| |||||||||||||||||||||||| || |||||| ||||||||||||| ||           
T  47917687 aatttggtctcataaatcttagttttctcaaacacgtccct-aacttatttcttttattcaatttgatctaattttaataattttaatcccctaaaaata 47917589  T
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttc 502  Q
     |||  |||||||||||||| | |||||||||||||||||||| ||||||||| |||||||||||||||    
T  47917588 aagattgttggattacggaggtttatcagattttatagtgtattaccaacaccgaatttatttactttc 47917520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 330 - 423
Target Start/End: Original strand, 53764467 - 53764560
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatcc 423  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  53764467 attcaatttggtctcataagtcttaactttctcaaacacgtcctttaacttatttcttttattcaatttagtcaaattttgataattttaatcc 53764560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 330 - 505
Target Start/End: Complemental strand, 50881188 - 50881020
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||  | ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||||| ||       
T  50881188 attcaatttgaccacataagtcttaactttctcaaacacgtcccttaatttatttcttttattcaatttagttcaattttgataattttaatccccta-- 50881091  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
         | |   |||||||| | || |||| || ||||||||||||| ||||||||||||||||||||| |||||||    
T  50881090 -----aaaaaattggattatgaaggtctaccatattttatagtgtaccaccaacacctaatttatttattttcttc 50881020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 291 - 423
Target Start/End: Original strand, 53178701 - 53178833
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    |||||||||||||||||| |  |||||||||        |||||||||| |  ||||||  ||||||||||||||||| | |||||||||||||||||||    
T  53178701 ggcttaattgatctgccgatcccttaacttattttttttattcaatttgatttcataagccttaactttctcaaacacgttccttaacttatttctttta 53178800  T
Q  391 ttcaatttggtccaattttgataattttaatcc 423  Q
    ||||||||| |||||||||||| ||||||||||    
T  53178801 ttcaatttgatccaattttgatcattttaatcc 53178833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 386 - 506
Target Start/End: Original strand, 50879782 - 50879902
Alignment:
Q  386 ttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacac 485  Q
    ||||||||||||| ||||||||||||||||||||||||  |        | | |||| |||||||||| |||||||||||||||||||||||||||||||    
T  50879782 ttttattcaattttgtccaattttgataattttaatcccatagaaaaaaaaatcgttagattacggaggtctatcagattttatagtgtatcaccaacac 50879881  T
Q  486 ctaatttatttactttcttct 506  Q
    ||||||| ||| |||||||||    
T  50879882 ctaatttgtttcctttcttct 50879902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 379 - 506
Target Start/End: Original strand, 10978093 - 10978219
Alignment:
Q  379 ttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatca 478  Q
    ||||||||||||||||| || |||||||||| ||||||||||||| ||       || |||||||||||||| || ||||| | ||||||||||||||||    
T  10978093 ttatttcttttattcaacttagtccaattttaataattttaatcccctaaaaaaagaaaccgttggattacgaaggtctataaaattttatagtgtatca 10978192  T
Q  479 ccaacacctaatttatttactttcttct 506  Q
    ||| |||||||||| |||||||||||||    
T  10978193 ccatcacctaattt-tttactttcttct 10978219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 349 - 421
Target Start/End: Complemental strand, 33113379 - 33113306
Alignment:
Q  349 gttttaactttctcaaacacatcccttaacttatttctttt-attcaatttggtccaattttgataattttaat 421  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33113379 gttttaactttttcaaacacgtcccttaacttatttctttttattcaatttggtccaattttgataattttaat 33113306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 330 - 423
Target Start/End: Complemental strand, 46986169 - 46986077
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatcc 423  Q
    |||||||||||||| |||||| |||||| |||||||||| ||||||||||||||| | ||||| ||||||||| ||||||||||||||||||||    
T  46986169 attcaatttggtccaataagtcttaactctctcaaacacgtcccttaacttattt-tcttattaaatttggtcaaattttgataattttaatcc 46986077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 330 - 403
Target Start/End: Original strand, 23072099 - 23072171
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||||||||||||    
T  23072099 attcaatttggtcccataagtcttaactttctcaaagacgt-ccttaacttatttcttttattcaatttggtcc 23072171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 330 - 403
Target Start/End: Original strand, 43392665 - 43392738
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||| ||||||| ||||||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  43392665 attcaatttggtctcataagtcttaactttctcaagcacgtccctgaacttatttcttttattcaatttggtcc 43392738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 424
Target Start/End: Complemental strand, 17117518 - 17117386
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||| ||||  |||||||||        ||||||||||||| ||||||| |||| |||||||||||| ||||||||  | ||| ||||    
T  17117518 aggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtctcataagtcttaagtttctcaaacacgtcccttaa--tttttttttt 17117421  T
Q  390 attcaatttggtccaattttgataattttaatcca 424  Q
    ||||||||||| | ||||||||| |||||||||||    
T  17117420 attcaatttgggcaaattttgatgattttaatcca 17117386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 334 - 505
Target Start/End: Complemental strand, 15290564 - 15290394
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnn 433  Q
    |||||| || ||||||| |||| |||||||||||  ||  |||| ||||||| ||||||||||||| ||||||||| ||||||||||| || |           
T  15290564 aatttgatcacataagtcttaattttctcaaacatgtctattaaattatttcatttattcaatttgatccaattttaataattttaat-catttaaaaaa 15290466  T
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
     ||||| ||| |||| | || |||| || |||||||||||||||| ||| |||||||||||||| |||||||    
T  15290465 aagaccattgaattatgaaggtctaccatattttatagtgtatcatcaatacctaatttatttattttcttc 15290394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 439 - 506
Target Start/End: Complemental strand, 33111815 - 33111748
Alignment:
Q  439 cgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    ||||| ||||||||| ||||| | ||||||||||||||| || |||||||||||||||||||||||||    
T  33111815 cgttgtattacggaggtctataaaattttatagtgtatctcccacacctaatttatttactttcttct 33111748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 379
Target Start/End: Original strand, 34014507 - 34014596
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||||||||  |||||||||        ||||||||||||||||||| | |||||| || ||||||||||||||||||    
T  34014507 aggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataaatcttaactgtcgcaaacacatcccttaact 34014596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 437 - 501
Target Start/End: Original strand, 53764896 - 53764959
Alignment:
Q  437 accgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttacttt 501  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  53764896 accgttgaattacggaggtctatcagattttatggtgtatcaccaacacttaattt-tttacttt 53764959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 451 - 506
Target Start/End: Original strand, 23072199 - 23072254
Alignment:
Q  451 gagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    ||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||    
T  23072199 gagatctatcagattttatagtgtaccgccaacaccagatttatttactttcttct 23072254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 455 - 506
Target Start/End: Original strand, 43392770 - 43392821
Alignment:
Q  455 tctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  43392770 tctatcagattttatagtgtaccaccaacaccaaatttatttattttcttct 43392821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 379
Target Start/End: Complemental strand, 24376547 - 24376458
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||||||||   ||||||||        ||||||||||||| |||||||||||||  || ||||||||||||||||||    
T  24376547 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtctcataagttttaacagtcacaaacacatcccttaact 24376458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 27750510 - 27750461
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  27750510 attcaatttggtctcataagttttaattttttcaaacacatcccttaact 27750461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 50879533 - 50879594
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttat 391  Q
    ||||||||||||||||||| | |||||||||| |||||| |||||||| |||||| ||||||    
T  50879533 attcaatttggtcccataaatcttaactttcttaaacacgtcccttaaattattttttttat 50879594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 504
Target Start/End: Original strand, 53101686 - 53101735
Alignment:
Q  455 tctatcagattttatagtgtatcaccaacacctaatttatttactttctt 504  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  53101686 tctaccagatcttatagtgtatcaccaacacttaatttatttactttctt 53101735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 403
Target Start/End: Original strand, 50879512 - 50879546
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtcc 403  Q
    |||||||||||||||||||||||||||||||||||    
T  50879512 atcccttaacttatttcttttattcaatttggtcc 50879546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 369 - 402
Target Start/End: Complemental strand, 17742393 - 17742360
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||||||||||||||||||||||||    
T  17742393 atcccttaacttatttcttttattcaatttggtc 17742360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 369 - 402
Target Start/End: Complemental strand, 19043713 - 19043680
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||||||||||||||||||||||||    
T  19043713 atcccttaacttatttcttttattcaatttggtc 19043680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 403
Target Start/End: Original strand, 34014527 - 34014560
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||||||    
T  34014527 tcccttaacttatttcttttattcaatttggtcc 34014560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 403
Target Start/End: Original strand, 46902350 - 46902383
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||||||    
T  46902350 tcccttaacttatttcttttattcaatttggtcc 46902383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 403
Target Start/End: Complemental strand, 46903723 - 46903690
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||||||    
T  46903723 tcccttaacttatttcttttattcaatttggtcc 46903690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 402
Target Start/End: Original strand, 43392645 - 43392677
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||||||    
T  43392645 tcccttaacttatttcttttattcaatttggtc 43392677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 402
Target Start/End: Original strand, 47429646 - 47429678
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||||||    
T  47429646 tcccttaacttatttcttttattcaatttggtc 47429678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 52525458 - 52525426
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||||||    
T  52525458 tcccttaacttatttcttttattcaatttggtc 52525426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 495
Target Start/End: Original strand, 27749248 - 27749291
Alignment:
Q  452 agatctatcagattttatagtgtatcaccaacacctaatttatt 495  Q
    ||||||||||||| |||||||||||||||||||| | |||||||    
T  27749248 agatctatcagatcttatagtgtatcaccaacacttgatttatt 27749291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 406
Target Start/End: Complemental strand, 46986188 - 46986153
Alignment:
Q  371 cccttaacttatttcttttattcaatttggtccaat 406  Q
    ||||||| ||||||||||||||||||||||||||||    
T  46986188 cccttaatttatttcttttattcaatttggtccaat 46986153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 401
Target Start/End: Original strand, 55209801 - 55209832
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggt 401  Q
    ||||||||||||||||||||||||||||||||    
T  55209801 tcccttaacttatttcttttattcaatttggt 55209832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 505
Target Start/End: Complemental strand, 34015741 - 34015691
Alignment:
Q  455 tctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||| ||||| |||| ||||||||||||||||| ||| |||||||||||||    
T  34015741 tctaccagatcttatggtgtatcaccaacacctgattgatttactttcttc 34015691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 403
Target Start/End: Complemental strand, 34015867 - 34015834
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    |||||||| |||||||||||||||||||||||||    
T  34015867 tcccttaagttatttcttttattcaatttggtcc 34015834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 399
Target Start/End: Complemental strand, 50881208 - 50881179
Alignment:
Q  370 tcccttaacttatttcttttattcaatttg 399  Q
    ||||||||||||||||||||||||||||||    
T  50881208 tcccttaacttatttcttttattcaatttg 50881179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 403
Target Start/End: Complemental strand, 53101872 - 53101839
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    |||||||| |||||||||||||||||||||||||    
T  53101872 tcccttaagttatttcttttattcaatttggtcc 53101839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 5171515 - 5171571
Alignment:
Q  115 tagggtcaatttggaatttttgtgttaaaatacaatagcggatccgaatccgctacc 171  Q
    |||||||||||||| |||||  || |||||| |||||| ||||| ||||||||||||    
T  5171515 tagggtcaatttgggattttcctgctaaaattcaatagtggatcagaatccgctacc 5171571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 402
Target Start/End: Complemental strand, 24376523 - 24376495
Alignment:
Q  374 ttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||    
T  24376523 ttaacttatttcttttattcaatttggtc 24376495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 401
Target Start/End: Complemental strand, 33113410 - 33113378
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggt 401  Q
    ||||||||| |||||||||||||||||||||||    
T  33113410 atcccttaatttatttcttttattcaatttggt 33113378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 37610825 - 37610797
Alignment:
Q  370 tcccttaacttatttcttttattcaattt 398  Q
    |||||||||||||||||||||||||||||    
T  37610825 tcccttaacttatttcttttattcaattt 37610797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 47431286 - 47431254
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||| ||||||||||||||||||||||||    
T  47431286 tcccttaatttatttcttttattcaatttggtc 47431254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 4e-70; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 287 - 506
Target Start/End: Original strand, 19217623 - 19217842
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  |||||||||        ||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  19217623 tttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccattaacttatttct 19217722  T
Q  387 tttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacc 486  Q
    ||||||||||||||| ||||||||||||||||||| | ||       |||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  19217723 tttattcaatttggtacaattttgataattttaataccctaaaaaaagagaccgttggattacggaggtctatcggattttatagtgtatcaccaacacc 19217822  T
Q  487 taatttatttactttcttct 506  Q
    ||||||||||||||||||||    
T  19217823 taatttatttactttcttct 19217842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 290 - 506
Target Start/End: Original strand, 43113673 - 43113889
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||| ||||  |||||||||        ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  43113673 aggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtctcataagttttaactttctcaaacacgtcccttaacttatttctttt 43113772  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    |||||||||||||||||||||||||||||||||| ||       |||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||    
T  43113773 attcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacagaggtctatcagattttatagtgtatcaccagcacctaa 43113872  T
Q  490 tttatttactttcttct 506  Q
    ||||||| |||||||||    
T  43113873 tttatttgctttcttct 43113889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 288 - 506
Target Start/End: Original strand, 29186661 - 29186879
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    ||||||||||||||||||| |||  |||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  29186661 ttaggcttaattgatctgctggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttatt 29186760  T
Q  388 ttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacct 487  Q
    |||||||||||||| |||||||||||||||||||||  |       |||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  29186761 ttattcaatttggttcaattttgataattttaatcccttaaaaaatgagaccgtaggattacggaggtctatcagattttatagtgtatcaccaacacct 29186860  T
Q  488 aatttatttactttcttct 506  Q
    |||||||||| ||||||||    
T  29186861 aatttatttattttcttct 29186879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 287 - 506
Target Start/End: Original strand, 44417453 - 44417672
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  |||||||||        |||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||| |    
T  44417453 tttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggttccataagtcttaacattctcaaacacgtcccttaacttatttat 44417552  T
Q  387 tttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacc 486  Q
    ||| ||||||||||||||||||||||||||||||||| ||       ||||  |||||||||||||| |||||||||||||||||| |||||||||||||    
T  44417553 tttcttcaatttggtccaattttgataattttaatcccctaaaaaaagagattgttggattacggaggtctatcagattttatagtctatcaccaacacc 44417652  T
Q  487 taatttatttactttcttct 506  Q
    ||||||||||||||||||||    
T  44417653 taatttatttactttcttct 44417672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 286 - 506
Target Start/End: Complemental strand, 29188153 - 29187933
Alignment:
Q  286 atttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttc 385  Q
    |||||||||||| ||||||||||||   ||||||||        ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||     
T  29188153 atttaggcttaaatgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaatttattta 29188054  T
Q  386 ttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacac 485  Q
    ||||||||||||| |||||||||||||||||||||||| ||       |||||||||||||| | ||| ||||||||||||||||||| |||||||||||    
T  29188053 ttttattcaatttagtccaattttgataattttaatcccctaaaaaaagagaccgttggattgcagaggtctatcagattttatagtgcatcaccaacac 29187954  T
Q  486 ctaatttatttactttcttct 506  Q
    |||||||||||||||||||||    
T  29187953 ctaatttatttactttcttct 29187933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 288 - 506
Target Start/End: Complemental strand, 18788681 - 18788463
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    ||||||||||||||| |||||||  ||||| |||        ||||||| |||||| |||| | ||||||||||||||||  ||||||||||||||||||    
T  18788681 ttaggcttaattgatatgccggtcccttaatttatttcttttattcaatatggtcctataaatcttaactttctcaaacatgtcccttaacttatttctt 18788582  T
Q  388 ttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacct 487  Q
    |||||||||||||||||||||||||||||||||||| ||        |||||||||||||||| || |||||||||||||||| ||||||||||||||||    
T  18788581 ttattcaatttggtccaattttgataattttaatcctctaaaaaaatagaccgttggattacgaaggtctatcagattttataatgtatcaccaacacct 18788482  T
Q  488 aatttatttactttcttct 506  Q
    |||||||||||||||||||    
T  18788481 aatttatttactttcttct 18788463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 285 - 506
Target Start/End: Complemental strand, 43962693 - 43962472
Alignment:
Q  285 aatttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttattt 384  Q
    ||||||||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| ||| ||||||||||||  |||||||||||||||    
T  43962693 aatttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcacataagtcttagctttctcaaacatgtcccttaacttattt 43962594  T
Q  385 cttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaaca 484  Q
    ||||||||||||||| ||||||||||||||||||||||  ||        |||||||||||||||| || |||||||||||||||||| |||||| ||||    
T  43962593 cttttattcaatttgatccaattttgataattttaatcatctaaaaaaacagaccgttggattacgaaggtctatcagattttatagtatatcactaaca 43962494  T
Q  485 cctaatttatttactttcttct 506  Q
    |||||||||||| |||||||||    
T  43962493 cctaatttatttcctttcttct 43962472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 291 - 506
Target Start/End: Original strand, 9391519 - 9391734
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        |||||||||||||| |||| | |||| |||||||||||| |||||| ||||||||||||||    
T  9391519 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataaatcttaattttctcaaacacgtcccttcacttatttctttta 9391618  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
    ||||||||||| |||||||||||||||||||||  |       ||||||||||||||||| || |||||||||||||||||||||||| ||||||| |||    
T  9391619 ttcaatttggtacaattttgataattttaatcctttaaaaaaagagaccgttggattacgaaggtctatcagattttatagtgtatcatcaacaccaaat 9391718  T
Q  491 ttatttactttcttct 506  Q
    ||||||||||||||||    
T  9391719 ttatttactttcttct 9391734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 287 - 506
Target Start/End: Original strand, 48792439 - 48792658
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  |||||||||        |||||||||||||||||||||||||||||| |||||||  |||||||||||||||||    
T  48792439 tttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttttcaaacatgtcccttaacttatttct 48792538  T
Q  387 tttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacc 486  Q
    ||||||||||||| || |||||||||||||||||||  ||       ||||||||||||||||   | | ||| ||||||||||||||||||||||||||    
T  48792539 tttattcaatttgatctaattttgataattttaatctcctaaaaaaagagaccgttggattacaagggtgtataagattttatagtgtatcaccaacacc 48792638  T
Q  487 taatttatttactttcttct 506  Q
     |||||||||||||||||||    
T  48792639 aaatttatttactttcttct 48792658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 345 - 506
Target Start/End: Complemental strand, 9392879 - 9392718
Alignment:
Q  345 ataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttgg 444  Q
    |||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||    
T  9392879 ataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatcccctagaaaaagagaccgttgg 9392780  T
Q  445 attacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    ||||| ||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  9392779 attacagaggtctatcagattttatagtgtatcaccggcacctaatttatttactttcttct 9392718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 44420601 - 44420426
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||       
T  44420601 attcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttagtccaattttgataattttaatgccctaaa 44420502  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        || |||||||||||||| || ||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  44420501 aaaagataccgttggattacgaaggtctatcaga-tttatagtgtatcaccaacatctaatttatttactttcttct 44420426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 290 - 506
Target Start/End: Complemental strand, 48793635 - 48793419
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    ||||||||||||| |||||||  |||||||||        ||||| ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||    
T  48793635 aggcttaattgatttgccggtcccttaacttatttcttttattcattttggtcccataagtcttaactttttcaaacacgtcccttaacttatttctttt 48793536  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    |||||||||| ||||||||||||||||||||||  ||       ||||||||||||||||  || | ||| |||||||||||||||||||||||||| ||    
T  48793535 attcaatttgatccaattttgataattttaatctcctaaaaaaagagaccgttggattacaaaggtgtataagattttatagtgtatcaccaacaccaaa 48793436  T
Q  490 tttatttactttcttct 506  Q
    |||||||||||||||||    
T  48793435 tttatttactttcttct 48793419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 291 - 502
Target Start/End: Complemental strand, 13750754 - 13750543
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        |||||||||| || ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  13750754 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttgatcacataagtcttaactttctcaaacacgtcccttaacttatttctttta 13750655  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
    ||||||||||||||||||||||||||||||||| ||        |||||||||||||||| || ||||| |||||||||||||||||| || || |||||    
T  13750654 ttcaatttggtccaattttgataattttaatcccctaaaaaaacagaccgttggattacgaaggtctattagattttatagtgtatcatcatcaactaat 13750555  T
Q  491 ttatttactttc 502  Q
    |||| |||||||    
T  13750554 ttatatactttc 13750543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 330 - 501
Target Start/End: Complemental strand, 27072733 - 27072562
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||||| |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       
T  27072733 attcaatttgatcccataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtcaaattttgataattttaatccactaaa 27072634  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttacttt 501  Q
         | ||||||||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  27072633 aaaaaaaaccgttggattacagaggtctataagattttatagtttatcaccaacacctaatttatttacttt 27072562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 330 - 501
Target Start/End: Original strand, 27205580 - 27205751
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||||| |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       
T  27205580 attcaatttgatcccataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtcaaattttgataattttaatccactaaa 27205679  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttacttt 501  Q
         | ||||||||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  27205680 aaaaaaaaccgttggattacagaggtctataagattttatagtctatcaccaacacctaatttatttacttt 27205751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 294 - 506
Target Start/End: Original strand, 3537429 - 3537640
Alignment:
Q  294 ttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattc 393  Q
    |||||||||||||||||  |||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3537429 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttcttttattc 3537528  T
Q  394 aatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaattta 493  Q
    ||||| ||| |||||| ||||||||||||| ||       || |||||||||||||| || ||||| | |||||||||| |||||||| ||||||||||     
T  3537529 aatttagtctaattttaataattttaatcccctaaaaaaagaaaccgttggattacgaaggtctataaaattttatagtatatcaccatcacctaattt- 3537627  T
Q  494 tttactttcttct 506  Q
    |||||||||||||    
T  3537628 tttactttcttct 3537640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 334 - 506
Target Start/End: Original strand, 18787191 - 18787363
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnn 433  Q
    ||||||||||||||| | |||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||           
T  18787191 aatttggtcccataaatcttaactttttcaaatatgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaa 18787290  T
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
     ||||||||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  18787291 tagaccgttggattacggaggtttatcagattttatggtgtatcaccaacacttaatttatttactttcttct 18787363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 335 - 506
Target Start/End: Complemental strand, 45400084 - 45399913
Alignment:
Q  335 atttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnng 434  Q
    |||||||| ||||| | ||||||||  ||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||       |    
T  45400084 atttggtctcataactcttaacttttgcaaacacgtcccttaacttatttcttttatttactttggtccaattttgataattttaatcccctaaaaaaag 45399985  T
Q  435 agaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45399984 agaccgttggattacgaaggtctatcagattttatagtgtatcactaacacctaatttatttactttcttct 45399913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 330 - 501
Target Start/End: Original strand, 7011672 - 7011844
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccact-nn 428  Q
    |||||||||| || ||||||| |||||||| |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |       
T  7011672 attcaatttgatctcataagtcttaactttatcaaacatgtcccttagcttatttcttttattcaatttggtccaattttgataattttaatccattaaa 7011771  T
Q  429 nnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttacttt 501  Q
          ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  7011772 aaaaaaagaccgttggattacggaggtctataagattttatagtgtatcaccaacacctaatttatttacttt 7011844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 330 - 501
Target Start/End: Original strand, 7027030 - 7027202
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccact-nn 428  Q
    |||||||||| || ||||||| |||||||| |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |       
T  7027030 attcaatttgatctcataagtcttaactttatcaaacatgtcccttagcttatttcttttattcaatttggtccaattttgataattttaatccattaaa 7027129  T
Q  429 nnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttacttt 501  Q
          ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  7027130 aaaaaaagaccgttggattacggaggtctataagattttatagtgtatcaccaacacctaatttatttacttt 7027202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 330 - 506
Target Start/End: Original strand, 13597183 - 13597358
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||| | ||||||||||||||||||||| ||       
T  13597183 attcaatttggtcctataagtcttaactttctcaaacacgtccctgaacttatttcttttattaaatttgat-caattttgataattttaatcctctaaa 13597281  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        || | |||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13597282 aaaagatatcgttggattagggaggtctataagattttatagtgtatcaccaacacctaatttatttactttcttct 13597358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 334 - 505
Target Start/End: Complemental strand, 37237300 - 37237132
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnn 433  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||| ||||| ||           
T  37237300 aatttggtctcataagtcttaactctctcaaacacatcccttaacttattt--tttattaaatttggtccaattttgataattt-aatcctctaaaaaaa 37237204  T
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37237203 gagatcgttggattacggaggtctatcagattttatagtgtatgaccaacacctaatttatttactttcttc 37237132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 288 - 500
Target Start/End: Complemental strand, 32519870 - 32519658
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    ||||||| |||||||||||||||  ||||| |||        ||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||    
T  32519870 ttaggctaaattgatctgccggtcccttaatttatttcttttattcaatttggtcccataaatcttaactttctcaaacacatcccttaaattatttctt 32519771  T
Q  388 ttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacct 487  Q
    |||||||||||||| ||||||| |||||||||||||  |       |||||||||| |||||| || |||| |||||| |||||||| ||||||||||||    
T  32519770 ttattcaatttggttcaattttaataattttaatcccttaaaaaaagagaccgttgaattacgaaggtctaccagattgtatagtgtgtcaccaacacct 32519671  T
Q  488 aatttatttactt 500  Q
    ||||| |||||||    
T  32519670 aatttttttactt 32519658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 358 - 506
Target Start/End: Original strand, 43961000 - 43961148
Alignment:
Q  358 ttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatct 457  Q
    ||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||        |||||||||||||||  || |||    
T  43961000 ttctcaaacacgtcccttaatttatttcttttattcaatttgatccaattttgataattttaatcctctacaaaaacagaccgttggattacaaaggtct 43961099  T
Q  458 atcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43961100 atcagattttatagtgtatcactaacacctaatttatttactttcttct 43961148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 370 - 506
Target Start/End: Complemental strand, 44748602 - 44748466
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttat 469  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||       ||||| ||||||||||| || |||||||||||||||    
T  44748602 tcccttaatttatttcttttattcaatatggtccaattttgataattttaatcccctagaaaaggagactgttggattacgaaggtctatcagattttat 44748503  T
Q  470 agtgtatcaccaacacctaatttatttactttcttct 506  Q
    |||||||||||||||||||||||||||||||||||||    
T  44748502 agtgtatcaccaacacctaatttatttactttcttct 44748466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 330 - 489
Target Start/End: Original strand, 44230466 - 44230625
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||| || |||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||| ||||||| ||||| ||       
T  44230466 attcaatttagttccataagttttaactttctcaatcacgtcctttaacttatttcttttattcaatttggtccaattttaataatttcaatcccctacg 44230565  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
        |||||||||||||||| ||| |||||||||||||| ||||||||| ||||||||||    
T  44230566 aaaagagaccgttggattacagaggtctatcagattttacagtgtatcatcaacacctaa 44230625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 294 - 496
Target Start/End: Original strand, 44746729 - 44746931
Alignment:
Q  294 ttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattc 393  Q
    |||||||||||| |||| ||||||||||        |||||||||| ||  |||||| |||| |||||||||||  | | ||||||||||||||||||||    
T  44746729 ttaattgatctgtcggtctcttaacttattttttttattcaatttgatcttataagtcttaattttctcaaacatgttcgttaacttatttcttttattc 44746828  T
Q  394 aatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaattta 493  Q
    ||||||||| ||||||||||||||||||||  |       |||||||||||||||||||| ||||||| |||||||||||||| | ||||||||||||||    
T  44746829 aatttggtcaaattttgataattttaatcccttagaaaaagagaccgttggattacggaggtctatcatattttatagtgtattatcaacacctaattta 44746928  T
Q  494 ttt 496  Q
    |||    
T  44746929 ttt 44746931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 370 - 505
Target Start/End: Original strand, 26005430 - 26005565
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttat 469  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||       ||||||||||||||||  || ||||| |||||||||    
T  26005430 tcccttaacttatttcttttattcaatttggttcaattttgataattttactccactaaaaaaagagaccgttggattacaaaggtctataagattttat 26005529  T
Q  470 agtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||||||||||||||| |||||||| ||||||||||    
T  26005530 agtgtatcaccaacacgtaatttatgtactttcttc 26005565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 330 - 495
Target Start/End: Original strand, 32518460 - 32518616
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||| |         ||||||||||| ||       
T  32518460 attcaatttggtcccataaatcttaactttctcaaacacgtcccttaaattatttcttttattcaatttggttc---------aattttaatcccctaaa 32518550  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatt 495  Q
         ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32518551 aaaaaagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatt 32518616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 331 - 506
Target Start/End: Original strand, 12630603 - 12630779
Alignment:
Q  331 ttcaatttggtcccataagttttaactttctcaaacacatcccttaac-ttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||||||| || |||| |||| |||||||||||| ||||||||| || ||| ||||||||||||||||| |||||||||||||||||||| ||       
T  12630603 ttcaatttggtctcaaaagtcttaattttctcaaacacgtcccttaacctttttttttttattcaatttggtctaattttgataattttaatcccctaga 12630702  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        ||||| |||||||||| ||| | |||||||||||||  || ||||| ||||||||||||||||||||||||||    
T  12630703 aaaagagactgttggattacagaggtatatcagattttattatggatcactaacacctaatttatttactttcttct 12630779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 291 - 504
Target Start/End: Complemental strand, 3538681 - 3538478
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||| ||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| ||  || ||||||||||||||    
T  3538681 ggcttaattgatccgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcttttcacttatttctttta 3538582  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
    ||||||||          ||||||||||| ||| ||       |||||||||||||||||||||||||||| ||||||  |||||||||||||| |||||    
T  3538581 ttcaattt----------tgataattttagtcccctaaaaaaagagaccgttggattacggagatctatcaaattttacggtgtatcaccaacatctaat 3538492  T
Q  491 ttatttactttctt 504  Q
    ||||||||||||||    
T  3538491 ttatttactttctt 3538478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 372 - 506
Target Start/End: Complemental strand, 43115124 - 43114990
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatag 471  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||  |        ||||||||||||||| ||  |||||||||||||||||    
T  43115124 ccttaacttatttcttttattcaatttgatccaattttgataattttaatcccttaaaaaagaagaccgttggattactgaagtctatcagattttatag 43115025  T
Q  472 tgtatcaccaacacctaatttatttactttcttct 506  Q
    || |||| ||  |||||||||||||||||||||||    
T  43115024 tgcatcatcataacctaatttatttactttcttct 43114990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 369 - 506
Target Start/End: Complemental strand, 13599298 - 13599160
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagacc-gttggattacggagatctatcagatttt 467  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||    |        | |   |||||||||||||| |||||||||||||    
T  13599298 atcctttaacttatttcttttattcaatttgctccaattttgataattttaatatcttaaaaaaaaaaaattgttggattacggaggtctatcagatttt 13599199  T
Q  468 atagtgtatcaccaacacctaatttatttactttcttct 506  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  13599198 atagtgtatcagtaacacctaatttatttactttcttct 13599160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 370 - 506
Target Start/End: Original strand, 13749082 - 13749217
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttat 469  Q
    |||| ||||||||||||| |||| |||||| |  |||||||||||||||||||| ||       |||||||||| |||||| || ||||| | ||||  |    
T  13749082 tcccataacttatttcttatatttaatttgatttaattttgataattttaatcctctaaaaaatgagaccgttgaattacgtaggtctataaaatttc-t 13749180  T
Q  470 agtgtatcaccaacacctaatttatttactttcttct 506  Q
    |||||||||||||||||||||||||||| ||||||||    
T  13749181 agtgtatcaccaacacctaatttatttaatttcttct 13749217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 289 - 419
Target Start/End: Original strand, 37235811 - 37235941
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||  ||||||||  |||||||||        ||| |||||||| |||||| |   ||||||||||||| | |||||||||||||||||||    
T  37235811 taggcttaattggcctgccggtcccttaacttatttcttttatttaatttggttccataaatcccaactttctcaaacgcgtcccttaacttatttcttt 37235910  T
Q  389 tattcaatttggtccaattttgataatttta 419  Q
     |||||||||||||||||||||| |||||||    
T  37235911 gattcaatttggtccaattttgagaatttta 37235941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 291 - 384
Target Start/End: Original strand, 45688867 - 45688960
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttattt 384  Q
    ||||||||||||||| ||||  |||||||||        ||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  45688867 ggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacatcccttaactcattt 45688960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 12630542 - 12630614
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||| ||||||| ||||||||||||||||  | ||||||||||| |||||| ||||||||||||    
T  12630542 attcaatttggtctcataagtcttaactttctcaaacatgttccttaacttatgtcttttcttcaatttggtc 12630614  T

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Target: chr7; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 289 - 384
Target Start/End: Original strand, 42611433 - 42611528
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttattt 384  Q
    ||||||||||||||||||||||   ||||||||        |||||||||||| |||||||||||||||||||||||||||  |||||||| ||||    
T  42611433 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggttccataagttttaactttctcaaacacactccttaactcattt 42611528  T

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Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 455 - 505
Target Start/End: Complemental strand, 44231815 - 44231765
Alignment:
Q  455 tctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  44231815 tctaccagattttatagtgtatcaccaacacctgatttatttactttcttc 44231765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 460 - 505
Target Start/End: Complemental strand, 9357745 - 9357700
Alignment:
Q  460 cagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  9357745 cagatcttatagtgtatcaccaacacctaatttatttactttcttc 9357700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 379
Target Start/End: Complemental strand, 26006862 - 26006773
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||| ||||  |||||||||         ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  26006862 aggcttaattgatctgtcggtcccttaacttatttcttttgttcaatttggtcccataagttttaactatcacaaacacatcccttaact 26006773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 379
Target Start/End: Original strand, 27071019 - 27071108
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||||||||   ||||||||        |||||||||||||||||||||||||||  || ||||||||||||||||||    
T  27071019 aggcttaattgatctgccggtcatttaacttatttcttttattcaatttggtcccataagttttaacagtcacaaacacatcccttaact 27071108  T

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Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 379
Target Start/End: Complemental strand, 27207294 - 27207205
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||||||||   ||||||||        |||||||||||||||||||||||||||  || ||||||||||||||||||    
T  27207294 aggcttaattgatctgccggtcatttaacttatttcttttattcaatttggtcccataagttttaacagtcacaaacacatcccttaact 27207205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 43853871 - 43853786
Alignment:
Q  85 cccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaatttttgtgttaaaatacaatagcggatccgaatccgctac 170  Q
    ||||||||||||| ||||| ||||| ||  |||||||||||||| |||||  || |||||| |||||||||||| |||||||||||    
T  43853871 cccaaaatgccctcaaaatggttttaaagttagggtcaatttgggattttcctgctaaaatccaatagcggatcagaatccgctac 43853786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 434 - 505
Target Start/End: Original strand, 45688991 - 45689060
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||| |||||||| | |||||||||||||||   |||||||||||||||||| |||||||||||||||||||    
T  45688991 gagatcgttggataagggagatctatcagatc--atagtgtatcaccaacacttaatttatttactttcttc 45689060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 379
Target Start/End: Complemental strand, 7057446 - 7057359
Alignment:
Q  292 gcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||||||  |||||||||        |||||||||||||||||||||||||||  || ||||||||||||| ||||    
T  7057446 gcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagttttaaccgtcacaaacacatccctcaact 7057359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 37235939 - 37235994
Alignment:
Q  446 ttacggagatctatcagattttatagtgtatcaccaacacctaatttatttacttt 501  Q
    |||||||| || ||||||||||| | ||||||||||||||||||||||||||||||    
T  37235939 ttacggaggtcaatcagattttacaatgtatcaccaacacctaatttatttacttt 37235994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 499
Target Start/End: Complemental strand, 29409216 - 29409151
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttact 499  Q
    ||||||||||||| |  |||||||||||||| | | ||||||| ||||||||||||||||||||||    
T  29409216 gagaccgttggataaatgagatctatcagatctaacagtgtataaccaacacctaatttatttact 29409151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 505
Target Start/End: Original strand, 45398689 - 45398737
Alignment:
Q  457 tatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||||    
T  45398689 tatcaaatcttatagtgtatcaccaacatctaatttatttactttcttc 45398737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 434 - 501
Target Start/End: Original strand, 42611559 - 42611626
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttacttt 501  Q
    |||| |||||||||| | ||||||||||||| ||||||||||||| ||| || | |||||||||||||    
T  42611559 gagatcgttggattaggaagatctatcagatcttatagtgtatcatcaatacttgatttatttacttt 42611626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 403
Target Start/End: Complemental strand, 7057428 - 7057395
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||||||    
T  7057428 tcccttaacttatttcttttattcaatttggtcc 7057395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 403
Target Start/End: Complemental strand, 44231941 - 44231908
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||||||    
T  44231941 tcccttaacttatttcttttattcaatttggtcc 44231908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 36395952 - 36396012
Alignment:
Q  435 agaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatt 495  Q
    |||| ||||||| | ||||||| ||||||||| | ||||||||||||||| ||||||||||    
T  36395952 agacggttggataaaggagatccatcagatttaacagtgtatcaccaacatctaatttatt 36396012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 402
Target Start/End: Original strand, 43960964 - 43960996
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||||||    
T  43960964 tcccttaacttatttcttttattcaatttggtc 43960996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 402
Target Start/End: Original strand, 45688886 - 45688918
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||||||    
T  45688886 tcccttaacttatttcttttattcaatttggtc 45688918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 19016775 - 19016725
Alignment:
Q  331 ttcaatttggtcccataagttttaactttctcaaacacatcccttaactta 381  Q
    |||||||||||||||||||| |||| ||| |||| ||| ||||||||||||    
T  19016775 ttcaatttggtcccataagtattaaatttgtcaaccacgtcccttaactta 19016725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 496
Target Start/End: Complemental strand, 19218959 - 19218897
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttattt 496  Q
    ||||||||||||| |  ||| || || |||||| | |||||||||||||||||||||||||||    
T  19218959 gagaccgttggataaaagaggtccatgagatttaacagtgtatcaccaacacctaatttattt 19218897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 505
Target Start/End: Complemental strand, 47536827 - 47536757
Alignment:
Q  435 agaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||||||||||| |  ||| |||||||||| | || |||||||||||||||||||||   |||||||||||    
T  47536827 agaccgttggataaaagaggtctatcagatctaatggtgtatcaccaacacctaattatattactttcttc 47536757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 399
Target Start/End: Original strand, 7011652 - 7011681
Alignment:
Q  370 tcccttaacttatttcttttattcaatttg 399  Q
    ||||||||||||||||||||||||||||||    
T  7011652 tcccttaacttatttcttttattcaatttg 7011681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 399
Target Start/End: Original strand, 7027010 - 7027039
Alignment:
Q  370 tcccttaacttatttcttttattcaatttg 399  Q
    ||||||||||||||||||||||||||||||    
T  7027010 tcccttaacttatttcttttattcaatttg 7027039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 403
Target Start/End: Original strand, 19008950 - 19008983
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    |||||||||||||||||||| |||||||||||||    
T  19008950 tcccttaacttatttctttttttcaatttggtcc 19008983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 403
Target Start/End: Complemental strand, 26006842 - 26006809
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    |||||||||||||||||||| |||||||||||||    
T  26006842 tcccttaacttatttcttttgttcaatttggtcc 26006809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 403
Target Start/End: Original strand, 27071043 - 27071072
Alignment:
Q  374 ttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||    
T  27071043 ttaacttatttcttttattcaatttggtcc 27071072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 403
Target Start/End: Complemental strand, 27207270 - 27207241
Alignment:
Q  374 ttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||    
T  27207270 ttaacttatttcttttattcaatttggtcc 27207241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 403
Target Start/End: Original strand, 32518440 - 32518473
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    |||||||| |||||||||||||||||||||||||    
T  32518440 tcccttaatttatttcttttattcaatttggtcc 32518473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 402
Target Start/End: Complemental strand, 44420622 - 44420589
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtc 402  Q
    |||| |||||||||||||||||||||||||||||    
T  44420622 atcctttaacttatttcttttattcaatttggtc 44420589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 1e-67; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 287 - 506
Target Start/End: Original strand, 9244061 - 9244280
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    |||||||||||||||||||| |||  |||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  9244061 tttaggcttaattgatctgctggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttat 9244160  T
Q  387 tttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacc 486  Q
    ||||||||||||||| |||||||||||||||||||||  |       |||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  9244161 tttattcaatttggttcaattttgataattttaatcccttaaaaaatgagaccgtaggattacggaggtctatcagattttatagtgtatcaccaacacc 9244260  T
Q  487 taatttatttactttcttct 506  Q
    ||||||||||| ||||||||    
T  9244261 taatttatttattttcttct 9244280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 291 - 506
Target Start/End: Original strand, 26364741 - 26364956
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||    
T  26364741 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacatcctttaacttatttctttta 26364840  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
    ||||||||| ||||||||||||||||||||||| ||       |||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||    
T  26364841 ttcaatttgatccaattttgataattttaatcctctaaaaaaagagaccgttggattacagaggtctatcagattttataatgtatcaccaacacctaat 26364940  T
Q  491 ttatttactttcttct 506  Q
    ||||||| ||||||||    
T  26364941 ttatttagtttcttct 26364956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 289 - 506
Target Start/End: Original strand, 20308921 - 20309138
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||||||  |||||||||        ||||||||  ||||||||||||||||||||||||||||| |||||||| |||||  |||    
T  20308921 taggcttaattgatctgccggtcccttaacttatttcttttattcaattgagtcccataagttttaactttctcaaacacgtcccttaatttattgtttt 20309020  T
Q  389 tattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacaccta 488  Q
    |||||||||||||||||||||||||||||| |||| ||       ||||||||||||| || ||| |||||||||||||||||||||||||||| |||||    
T  20309021 tattcaatttggtccaattttgataattttgatcccctagaaaaagagaccgttggatcactgaggtctatcagattttatagtgtatcaccaataccta 20309120  T
Q  489 atttatttactttcttct 506  Q
    ||||||||||||||||||    
T  20309121 atttatttactttcttct 20309138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 289 - 506
Target Start/End: Original strand, 21095554 - 21095771
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||||||  |||||||||        ||||||||  ||||||||||||||||||||||||||||| |||||||| |||||  |||    
T  21095554 taggcttaattgatctgccggtcccttaacttatttcttttattcaattgagtcccataagttttaactttctcaaacacgtcccttaatttattgtttt 21095653  T
Q  389 tattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacaccta 488  Q
    |||||||||||||||||||||||||||||| |||| ||       ||||||||||||| || ||| |||||||||||||||||||||||||||| |||||    
T  21095654 tattcaatttggtccaattttgataattttgatcccctagaaaaagagaccgttggatcactgaggtctatcagattttatagtgtatcaccaataccta 21095753  T
Q  489 atttatttactttcttct 506  Q
    ||||||||||||||||||    
T  21095754 atttatttactttcttct 21095771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 9245510 - 9245334
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||| |||||||||| ||||||||||||| ||       
T  9245510 attcaatttggtcccataagtcttaactttctcaaacacgtcccttaatttatttattttattcaatttagtccaatttttataattttaatcccctaaa 9245411  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9245410 aaaagagaccgttggattgctgaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 9245334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 330 - 506
Target Start/End: Original strand, 41636870 - 41637046
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||||| ||||||||||||||||||||||||||| ||| ||||||||||||| ||       
T  41636870 attcaatttggtcccataagtcttaactttctaaaacacgtcccttaatttatttcttttattcaatttggtccaacttttataattttaatcccctaaa 41636969  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        |||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41636970 aaaagagaccgttggattacggaagtctatcagattttatcgtgtatcaccaacacctaatttatttactttcttct 41637046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 330 - 506
Target Start/End: Original strand, 30640837 - 30641012
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||||||||||||||||| || |||||||| ||  |||||||||||||||||||||||||| ||||||||| ||||||||||||| ||       
T  30640837 attcaatttggtcccataagttttaaccttatcaaacacgtca-ttaacttatttcttttattcaatttgatccaattttaataattttaatcccctaaa 30640935  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30640936 aaaagagaccgttggattacggaggtctatcaaattttatagtgtatcaccaacacctaatttatttactttcttct 30641012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 522176 - 522000
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||||||| |||||||| ||||||||||||||||  ||||||||||||||| |||||||||||||| || |||||||||||||||||||| ||       
T  522176 attcaatttggttccataagtcttaactttctcaaacatgtcccttaacttatttattttattcaatttgatctaattttgataattttaatcccctaga 522077  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        ||||| |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  522076 aaaagagactgttggattacggaggtctatcaaattttatagtgtatcaccaacccctaatttatttactttcttct 522000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 293 - 501
Target Start/End: Original strand, 34642667 - 34642874
Alignment:
Q  293 cttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttatt 392  Q
    |||||||||||||||||| ||||||||||        |||||||||||||  |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  34642667 cttaattgatctgccggtctcttaacttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaacttatttcttttatt 34642766  T
Q  393 caatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaattt 492  Q
    |||||||||  |||||||||||||||||||| ||        | ||||||||||| ||||| |||||||||||||||||| ||||||||||| |||||||    
T  34642767 caatttggtttaattttgataattttaatcccctaaaaaaa-aaaccgttggattgcggaggtctatcagattttatagtatatcaccaacatctaattt 34642865  T
Q  493 atttacttt 501  Q
    |||||||||    
T  34642866 atttacttt 34642874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 334 - 506
Target Start/End: Complemental strand, 30644779 - 30644608
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnn 433  Q
    ||||||||||||||| | ||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||           
T  30644779 aatttggtcccataaatcttaactttctcaaacacgtctcttaacttatttcttttattcaatttgatccaattttgataattttaatcctct-aaaaaa 30644681  T
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    |||||||||||||||||||| ||||||| |||||||| || ||||||||||||||||||||||| ||| ||||    
T  30644680 gagaccgttggattacggaggtctatcaaattttataatggatcaccaacacctaatttatttagttttttct 30644608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 286 - 506
Target Start/End: Original strand, 43584403 - 43584623
Alignment:
Q  286 atttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttc 385  Q
    |||||||||||||||||||| ||||   ||||||||        |||||||||| || ||||||| ||||||||||||||||| ||||||||||||||||    
T  43584403 atttaggcttaattgatctgtcggtccattaacttatttcttttattcaatttgatctcataagtcttaactttctcaaacacgtcccttaacttatttc 43584502  T
Q  386 ttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacac 485  Q
    |||||||||||||| ||||||||||||||||||||||   |       ||||||||||||||||  |  |||||||||||||||| |||||||||||       
T  43584503 ttttattcaatttgatccaattttgataattttaatcttttaaaaaaagagaccgttggattacaaaagtctatcagattttataatgtatcaccaatgt 43584602  T
Q  486 ctaatttatttactttcttct 506  Q
    |||||||||||||||||||||    
T  43584603 ctaatttatttactttcttct 43584623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 334 - 506
Target Start/End: Complemental strand, 26366269 - 26366097
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnn 433  Q
    ||||||||  ||||||| ||||| || |||||||  | || |||||||||||||||||||||||||||||| |||| ||||||||||||| ||           
T  26366269 aatttggtttcataagtcttaaccttatcaaacatgttccataacttatttcttttattcaatttggtccatttttaataattttaatcccctaaaaaaa 26366170  T
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
     |||||||| |||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  26366169 aagaccgttagattacggaggtctattagattttatagtgtatcaccaacacataatttatttactttcttct 26366097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 291 - 492
Target Start/End: Complemental strand, 41638270 - 41638070
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        |||||||||  || ||||||| ||||||||||||||||  ||| |||||||||||||||||    
T  41638270 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttattctcataagtcttaactttctcaaacatgtcctttaacttatttctttta 41638171  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
    ||||||||||||||||||| ||||||||||||| ||       |||||  ||||||||| ||| |||||||  |||||||||||||||||||||||||||    
T  41638170 ttcaatttggtccaattttaataattttaatcccct-aaaaaagagacaattggattacagaggtctatcatgttttatagtgtatcaccaacacctaat 41638072  T
Q  491 tt 492  Q
    ||    
T  41638071 tt 41638070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 330 - 504
Target Start/End: Complemental strand, 20310131 - 20309956
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccact-nn 428  Q
    ||||| ||||||| ||||||| |||| |||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||  |       
T  20310131 attcattttggtctcataagtcttaagtttctcaaacacgtcccttaacttatttcttttattcgatttggttcaattttgataattttaatcccttaga 20310032  T
Q  429 nnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttctt 504  Q
          |||||||||||||| | || ||| |||||||||||||||||||||| |||||||| ||||||||||||||    
T  20310031 aaaaaaagaccgttggattatgaaggtctgtcagattttatagtgtatcacctacacctaacttatttactttctt 20309956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 330 - 504
Target Start/End: Complemental strand, 21096764 - 21096589
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccact-nn 428  Q
    ||||| ||||||| ||||||| |||| |||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||  |       
T  21096764 attcattttggtctcataagtcttaagtttctcaaacacgtcccttaacttatttcttttattcgatttggttcaattttgataattttaatcccttaga 21096665  T
Q  429 nnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttctt 504  Q
          |||||||||||||| | || ||| |||||||||||||||||||||| |||||||| ||||||||||||||    
T  21096664 aaaaaaagaccgttggattatgaaggtctgtcagattttatagtgtatcacctacacctaacttatttactttctt 21096589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 330 - 496
Target Start/End: Complemental strand, 34644038 - 34643878
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||||| |||||||| | ||||||||||||||||| ||  |||| |||||||||||||| ||||| || ||||||||||||||||||||| ||       
T  34644038 attcaatttg-tcccataaatcttaactttctcaaacacctctattaatttatttcttttatttaatttagttcaattttgataattttaatcccctaaa 34643940  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttattt 496  Q
         |||||||||||||   ||| ||||||||||||||| | ||||||||||||||||||||||||    
T  34643939 aaa--agaccgttggatt---gaggtctatcagattttatggcgtatcaccaacacctaatttattt 34643878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 289 - 379
Target Start/End: Complemental strand, 3714640 - 3714550
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    ||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3714640 taggcttaattgatctgccggttccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacatcccttaact 3714550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 334 - 505
Target Start/End: Complemental strand, 43586019 - 43585849
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnn 433  Q
    |||||| || ||||||| |||| |||||||||||  ||  |||| ||||||| ||||||||||||| ||||||||| |||||||||||||  |           
T  43586019 aatttgatctcataagtcttaattttctcaaacatgtctattaaattatttcatttattcaatttgatccaattttaataattttaatcc-tttaaaaaa 43585921  T
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
     ||||| |||||||| | || |||| || |||||||||||||||| ||| |||||||||||||| |||||||    
T  43585920 aagaccattggattatgaaggtctaccatattttatagtgtatcatcaatacctaatttatttattttcttc 43585849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 434 - 505
Target Start/End: Complemental strand, 3714514 - 3714443
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||| |||||||| | ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  3714514 gagatcgttggataagggagatctatcagatcttatagtgtatcaccaacacttgatttatttactttcttc 3714443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 434 - 506
Target Start/End: Original strand, 22012280 - 22012352
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    |||| |||||||| |  ||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  22012280 gagatcgttggataagtgaggtctaccagattttatagtgtatcaccaacacctgatttatttactttcttct 22012352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 31203005 - 31203068
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattc 393  Q
    ||||| ||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||    
T  31203005 attcattttggtcccataaatcttaagtttctcaaacacgtcccttaacttatttcttttattc 31203068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 434 - 502
Target Start/End: Complemental strand, 22013234 - 22013166
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttc 502  Q
    |||| |||||||| |  ||| |||| |||||||||||||||||||||||||||| ||||||||||||||    
T  22013234 gagatcgttggataagtgaggtctaccagattttatagtgtatcaccaacacctgatttatttactttc 22013166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 434 - 505
Target Start/End: Original strand, 3713185 - 3713256
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||| |||||||| | |||||||||| |||| |||||||||||||| ||||| | |||||||||||||||||    
T  3713185 gagatcgttggataagggagatctattagatcttatagtgtatcacaaacacttgatttatttactttcttc 3713256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 502
Target Start/End: Original strand, 31203071 - 31203126
Alignment:
Q  447 tacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttc 502  Q
    ||||||| ||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  31203071 tacggaggtctatcaaattttataatgtatcaccaacacctaacttatttactttc 31203126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 20066216 - 20066277
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatt 495  Q
    ||||||||||||| |  |||||| ||||||||| | ||||||||||||||||||||||||||    
T  20066216 gagaccgttggataaaagagatccatcagatttaacagtgtatcaccaacacctaatttatt 20066277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 43134128 - 43134079
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||    
T  43134128 attcaatttggtcctataacttttaactttcttaaacacatcccttaact 43134079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 379
Target Start/End: Original strand, 3713114 - 3713149
Alignment:
Q  344 cataagttttaactttctcaaacacatcccttaact 379  Q
    ||||||||||||||||||||||||||||||||||||    
T  3713114 cataagttttaactttctcaaacacatcccttaact 3713149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 43134022 - 43133976
Alignment:
Q  455 tctatcagattttatagtgtatcaccaacacctaatttatttacttt 501  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||    
T  43134022 tctaccagattttatagtgtatcaccaacacttgatttatttacttt 43133976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 401
Target Start/End: Complemental strand, 522196 - 522165
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggt 401  Q
    ||||||||||||||||||||||||||||||||    
T  522196 tcccttaacttatttcttttattcaatttggt 522165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 403
Target Start/End: Complemental strand, 3714617 - 3714586
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||||    
T  3714617 ccttaacttatttcttttattcaatttggtcc 3714586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 13341421 - 13341371
Alignment:
Q  80 aaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaa 130  Q
    |||||||||||||||||| ||||  ||||| ||| ||||||||||||||||    
T  13341421 aaatccccaaaatgccctcaaaaaggttttcaaaatagggtcaatttggaa 13341371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 403
Target Start/End: Complemental strand, 9245526 - 9245497
Alignment:
Q  374 ttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||    
T  9245526 ttaacttatttcttttattcaatttggtcc 9245497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 403
Target Start/End: Original strand, 30640821 - 30640850
Alignment:
Q  374 ttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||    
T  30640821 ttaacttatttcttttattcaatttggtcc 30640850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 403
Target Start/End: Complemental strand, 43134144 - 43134115
Alignment:
Q  374 ttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||    
T  43134144 ttaacttatttcttttattcaatttggtcc 43134115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 20310151 - 20310119
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||||||||||||||| |||||||    
T  20310151 tcccttaacttatttcttttattcattttggtc 20310119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 21096784 - 21096752
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||||||||||||||| |||||||    
T  21096784 tcccttaacttatttcttttattcattttggtc 21096752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 1e-67; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 287 - 506
Target Start/End: Original strand, 51693143 - 51693362
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||| ||||  |||||||||        ||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  51693143 tttaggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcctttaacttatttct 51693242  T
Q  387 tttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacc 486  Q
    ||||||||||||||| ||||||||||||||||||| | ||       |||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  51693243 tttattcaatttggttcaattttgataattttaataccctaaaaaaagagaccgttggattacggaggtctatcggattttatagtgtatcaccaacacc 51693342  T
Q  487 taatttatttactttcttct 506  Q
    ||||||||||||||||||||    
T  51693343 taatttatttactttcttct 51693362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 7111554 - 7111378
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||||||||| |||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||       
T  7111554 attcaatttggtcctataagtcttaactttctcaaacacgtccattaactgatttcttttattcaatttggtccaattttgataattttaatcccctaaa 7111455  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7111454 aaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttct 7111378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 291 - 506
Target Start/End: Original strand, 17244175 - 17244390
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||| | ||||||||| |||||||||        ||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| |    
T  17244175 ggcttaattaacctgccggttccttaacttatttcttttattcaatttggtcccataagtctcaactttctcaaacacgtcccttaacttatttctttga 17244274  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
    ||||||||||||||||||||||||||||||||  ||       |||||||||||||||||||| |||||||||||||||| ||||||||| | |||||||    
T  17244275 ttcaatttggtccaattttgataattttaatctcctaaaaaaagagaccgttggattacggaggtctatcagattttataatgtatcaccgatacctaat 17244374  T
Q  491 ttatttactttcttct 506  Q
    ||||||||||||||||    
T  17244375 ttatttactttcttct 17244390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 290 - 506
Target Start/End: Original strand, 7110225 - 7110441
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||  ||||| |||        ||| |||||||||| |||||| ||||||||||||||||| |||||||||| |||||||||    
T  7110225 aggcttaattgatctgccggtcccttaatttatttcttttatttaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttctttt 7110324  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    |||||||||||||||||||||||||||||||||| ||       |||| ||||||||| ||||| |||||||||||||||||||||||| |||| |||||    
T  7110325 attcaatttggtccaattttgataattttaatcccctaaaaaaagagatcgttggattgcggaggtctatcagattttatagtgtatcatcaacgcctaa 7110424  T
Q  490 tttatttactttcttct 506  Q
    |||||||||||||||||    
T  7110425 tttatttactttcttct 7110441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 291 - 506
Target Start/End: Original strand, 51468339 - 51468554
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  51468339 ggcttaattgatctgccggtcccttaacttattttttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttctttta 51468438  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
    ||||||||||||||||||| ||||||||||||| ||        |||  | |||||||||||| |||||||||||||||||||||||||||||||| |||    
T  51468439 ttcaatttggtccaattttaataattttaatcccctaaaaaaaaagattgatggattacggaggtctatcagattttatagtgtatcaccaacacccaat 51468538  T
Q  491 ttatttactttcttct 506  Q
    ||||||||||| ||||    
T  51468539 ttatttacttttttct 51468554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 287 - 506
Target Start/End: Original strand, 52086623 - 52086840
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  |||||||||        ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  52086623 tttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttct 52086722  T
Q  387 tttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacc 486  Q
    |||||||||||| |||||||||| ||||||||||||| ||        | |||||||||||||| || ||||| | ||||||||||||||||||| ||||    
T  52086723 tttattcaatttagtccaattttaataattttaatcccctaaaaaa--aaaccgttggattacgaaggtctataaaattttatagtgtatcaccatcacc 52086820  T
Q  487 taatttatttactttcttct 506  Q
    |||||| |||||||||||||    
T  52086821 taatttttttactttcttct 52086840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 330 - 496
Target Start/End: Complemental strand, 5488946 - 5488780
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||| ||||||||||| ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||  |       
T  5488946 attcaatttagtcccataagtcttaactttctcaaacacgttcattaacttatttcttttattcaatttggtccaattttgataattttaatcccttaga 5488847  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttattt 496  Q
        |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  5488846 aaaagagaccgttggattacggaggtctatcaaattttatagtgtatcaccaacacctaatttattt 5488780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 297 - 492
Target Start/End: Complemental strand, 50485108 - 50484913
Alignment:
Q  297 attgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaat 396  Q
    ||||||||||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  50485108 attgatctgccggtcccttaacttatttcatttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaat 50485009  T
Q  397 ttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaattt 492  Q
    ||||||||||||||||||||||||||| ||       |||||| |||||||||  || |||||||||||||| |||||||||||||||||||||||    
T  50485008 ttggtccaattttgataattttaatcccctaaaaaaagagaccattggattacataggtctatcagattttacagtgtatcaccaacacctaattt 50484913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 290 - 489
Target Start/End: Original strand, 18819261 - 18819460
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||| ||||| |||        |||||||||| |||||||||| ||||||||||||| ||| |||||||| |||||||||||    
T  18819261 aggcttaattgatctgccggttccttaaattattttttttattcaatttgatcccataagtcttaactttctcaatcacgtcccttaatttatttctttt 18819360  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    ||||||||||| |||||||| ||||||||||||| ||       || ||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  18819361 attcaatttggcccaattttaataattttaatcccctatgaaaagaaaccgttggattacggaggtatatcagattttatagtgtatcaccaacacctaa 18819460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 334 - 506
Target Start/End: Original strand, 45228318 - 45228490
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnn 433  Q
    ||||| ||||||||| ||||||| || |||||||| | | |||||||||||||||||||||||||||||||||||| ||||||||||||| ||           
T  45228318 aattttgtcccataaattttaaccttatcaaacacgttctttaacttatttcttttattcaatttggtccaattttaataattttaatcccctaaaaaaa 45228417  T
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||||||||||||||||||    
T  45228418 gagaccgttggattacggagatctatcaaattttatagtgtatcacaaacgcttaatttatttactttcttct 45228490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 51468980 - 51468804
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||||||||| | |||||||| |||||||| ||||| |||||||||||| ||||||||||||||||||||| ||||||||||||| ||       
T  51468980 attcaatttggtcccataaatcttaactttttcaaacacgtccctaaacttatttcttctattcaatttggtccaattttaataattttaatcccctaaa 51468881  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
         | | | ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  51468880 aaaaaaaagcattggattacggagatctattagattttacagtgtatcaccaacacctaatttatttactttcttct 51468804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 372 - 503
Target Start/End: Complemental strand, 52761633 - 52761502
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatag 471  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||||| ||||| |||||||||||||||||    
T  52761633 ccttaacttatttcttttattcaatttggtccaattttgataattttaatcccctgaaaaaagagaccgttggattgcggaggtctatcagattttatag 52761534  T
Q  472 tgtatcaccaacacctaatttatttactttct 503  Q
    ||||||||||||||||||||||||||||||||    
T  52761533 tgtatcaccaacacctaatttatttactttct 52761502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 330 - 492
Target Start/End: Original strand, 5488540 - 5488702
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||||| | |||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||  |       
T  5488540 attcaatttgattccataagacttaactttctcaaacacgtcctttaacttatttcttttattcaatttgatccaattttgataattttaatcccttaga 5488639  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaattt 492  Q
        |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  5488640 aaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacgtaattt 5488702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 290 - 506
Target Start/End: Original strand, 52759362 - 52759578
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    ||||||||||||||||||| |  |||||||||        ||| ||||||||  ||||||| |||||||||||||| || ||| ||||||||| | ||||    
T  52759362 aggcttaattgatctgccgatcccttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaaaacgtccattaacttatctatttt 52759461  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    ||||||||| |||||||||||||||||||||||   |       |||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||    
T  52759462 attcaatttagtccaattttgataattttaatctcttaaaaaatgagaccgttgaattacagaggtctatcagattttatagtgtatcaccaacacctaa 52759561  T
Q  490 tttatttactttcttct 506  Q
    |||||||||||||||||    
T  52759562 tttatttactttcttct 52759578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 330 - 489
Target Start/End: Original strand, 40187642 - 40187800
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||||||||||| |||||||| |||||||  ||| ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||       
T  40187642 attcaatttggtcccataagtcttaactttatcaaacatgtcc-ttaacttatttcttttactcaatttggtccaatttttataattttaatcccctaaa 40187740  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
        |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  40187741 aaaagagaccgttggattacggaggtctatcagattttatcgtgtatcaccaacacctaa 40187800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 330 - 504
Target Start/End: Complemental strand, 45229682 - 45229508
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||| ||||| | |||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||  |       
T  45229682 attcaatttggtctcataaatcttaattttctcaaacacgtcccttaacttatttcttttattcaatttgatccaattttgataattttaatcctataaa 45229583  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttctt 504  Q
         |||  |||||||||||||| |||||||||||||||| || ||||||||||||||||||||||| ||||||    
T  45229582 aaaaaagattgttggattacggaggtctatcagattttataatggatcaccaacacctaatttatttagtttctt 45229508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 38235228 - 38235053
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||||||||  |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||||||| |        
T  38235228 attcaatttggtcatataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttggtccaattttaataagtttaatcc-caaaa 38235130  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
         | |||||||||||||| |  ||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  38235129 aaaacaaaccgttggattacgaatgtctataagattttacagtgtatcaccaacacctaatttatttactttcttct 38235053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 330 - 504
Target Start/End: Complemental strand, 52087853 - 52087679
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||| |||| || ||||||||||||||||| ||| || ||||||||||||||||||||||| | ||||||||||||||||| ||| ||       
T  52087853 attcaatttggtctcatatgtcttaactttctcaaacacgtcctttcacttatttcttttattcaatttgattcaattttgataattttagtcccctaaa 52087754  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttctt 504  Q
        |||||||||| ||||||||| ||||||| ||||||  |||||||||||||| |||||||||||| ||||||    
T  52087753 aaaagagaccgttgaattacggaggtctatcaaattttacggtgtatcaccaacatctaatttatttaatttctt 52087679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 293 - 505
Target Start/End: Complemental strand, 47533970 - 47533758
Alignment:
Q  293 cttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttatt 392  Q
    |||||||||||||| ||| |||||| |||        ||| ||||| |||||||||||||||||||| ||||| || || ||||| ||||||| || |||    
T  47533970 cttaattgatctgctggtctcttaaattatttcttttatttaatttagtcccataagttttaactttttcaaatacgtctcttaaattatttcattcatt 47533871  T
Q  393 caatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaattt 492  Q
    ||||||| | |||||||||||||| |||||| |         ||||||||  ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  47533870 caatttgattcaattttgataattataatcctccaaaaaaatagaccgttaaattagagagatctatcagattttatagtgtatcaccaacacctaattt 47533771  T
Q  493 atttactttcttc 505  Q
    |||||||||||||    
T  47533770 atttactttcttc 47533758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 330 - 496
Target Start/End: Original strand, 1821947 - 1822114
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaactta-tttcttttattcaatttggtccaattttgataattttaatccactnn 428  Q
    ||||||||| |||| |||| ||||||||||||||||||| |||||||||||| ||| ||||||| ||||| ||| ||||||||||||||||||||  |      
T  1821947 attcaattttgtcctataaattttaactttctcaaacacgtcccttaacttatttttttttatttaatttagtctaattttgataattttaatcctttaa 1822046  T
Q  429 nnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttattt 496  Q
         ||||||||||| ||||| || |||||| |||||||||||||||||  ||||||||||||||||    
T  1822047 aaaaagagaccgttgggttacgaaggtctatctgattttatagtgtatcattaacacctaatttattt 1822114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 288 - 506
Target Start/End: Original strand, 50483508 - 50483725
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    |||||||||||||||||| |||| | ||||||||        ||||||||||||| ||||||| |||| ||||| ||| || ||  |||| |||||||||    
T  50483508 ttaggcttaattgatctgtcggtct-ttaacttatttcttgtattcaatttggtctcataagtcttaattttcttaaaaacgtcatttaatttatttctt 50483606  T
Q  388 ttattcaatttggtccaattttgataattttaatccact-nnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacc 486  Q
    |||||||||||||||||||||| ||||||||| ||| ||        ||||| |||||||||||||  |||| |||||||||| |||||| |||||||||    
T  50483607 ttattcaatttggtccaatttttataattttactcccctaaaaaaaagagactgttggattacggaagtcta-cagattttatcgtgtataaccaacacc 50483705  T
Q  487 taatttatttactttcttct 506  Q
    ||||||||||||||||||||    
T  50483706 taatttatttactttcttct 50483725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 290 - 490
Target Start/End: Complemental strand, 1823411 - 1823215
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||  |||||||||        ||||||||| ||| ||||||| ||||   |||||||||  || |||||||||||| ||||    
T  1823411 aggcttaattgatctgccggtcccttaacttatttcttttattcaatttagtcacataagtcttaa---tctcaaacatgtcgcttaacttattt-tttt 1823316  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    |||||||||| ||||||||||||||||||||||  ||        | |||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  1823315 attcaatttgatccaattttgataattttaatcttctaaaaagataaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaa 1823216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 290 - 453
Target Start/End: Complemental strand, 17245783 - 17245621
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||| ||||||| ||||| |||        ||||||||||||| ||||||| |||||| |||||||||  ||||||||||||||| ||||    
T  17245783 aggcttaattgatccgccggttccttaatttatttcttttattcaatttggtctcataagtcttaactctctcaaacaagtcccttaacttattt-tttt 17245685  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggag 453  Q
    ||| ||||||||||||||||||| |||||||||| ||        |||||||||||||||||||    
T  17245684 attaaatttggtccaattttgatcattttaatcctctaaaaaaaaagaccgttggattacggag 17245621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 434 - 504
Target Start/End: Original strand, 21203154 - 21203224
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttctt 504  Q
    ||||||||||||||||  || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21203154 gagaccgttggattacaaaggtctatcagattttatagtgtatcatcaacacctaatttatttactttctt 21203224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 330 - 485
Target Start/End: Original strand, 47532996 - 47533150
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||| ||||| | |||||||| |||||||| | |||||| ||||||| ||||||||||||| | ||||||||||||||||||||  ||       
T  47532996 attcaatttggtctcataaatcttaactttatcaaacacgttccttaaattatttcatttattcaatttgattcaattttgataattttaatcttctaaa 47533095  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacac 485  Q
         |||| |||| |||| |||  |||||||||||||||| ||||||||||||||    
T  47533096 aaac-agactgttgaattatggaagtctatcagattttataatgtatcaccaacac 47533150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 25181502 - 25181596
Alignment:
Q  292 gcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    |||||||||||||||||||  |||||||||        |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  25181502 gcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaacttatttct 25181596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 403
Target Start/End: Original strand, 25181520 - 25181553
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||||||    
T  25181520 tcccttaacttatttcttttattcaatttggtcc 25181553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 18820855 - 18820823
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||||||    
T  18820855 tcccttaacttatttcttttattcaatttggtc 18820823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 403
Target Start/End: Complemental strand, 5488967 - 5488933
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtcc 403  Q
    |||||||||||||||||||||||||||||| ||||    
T  5488967 atcccttaacttatttcttttattcaatttagtcc 5488933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 403
Target Start/End: Complemental strand, 51469000 - 51468967
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||| ||||||||||||||||||    
T  51469000 tcccttaacttattttttttattcaatttggtcc 51468967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 402
Target Start/End: Complemental strand, 52087870 - 52087841
Alignment:
Q  373 cttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||||||||||||||||||||    
T  52087870 cttaacttatttcttttattcaatttggtc 52087841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 461 - 505
Target Start/End: Complemental strand, 18820723 - 18820679
Alignment:
Q  461 agattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||||| |||||||||||| ||||||| ||| |||||||||||||    
T  18820723 agatttgatagtgtatcactaacacctgattcatttactttcttc 18820679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 38235248 - 38235216
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||| ||||||||||||||||||||||||    
T  38235248 tcccttaatttatttcttttattcaatttggtc 38235216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 45229702 - 45229670
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||| ||||||||||||||||||||||||    
T  45229702 tcccttaatttatttcttttattcaatttggtc 45229670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 6e-66; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 290 - 506
Target Start/End: Complemental strand, 32349156 - 32348940
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||  ||||| |||        |||||||||||||  |||||| ||||||||||||||||| |||||||||| |||||||||    
T  32349156 aggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcttataagtcttaactttctcaaacacgtcccttaactgatttctttt 32349057  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    |||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  32349056 attcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaa 32348957  T
Q  490 tttatttactttcttct 506  Q
    |||||||||||||||||    
T  32348956 tttatttactttcttct 32348940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 289 - 504
Target Start/End: Complemental strand, 11801462 - 11801247
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||||||  ||||| |||        |||||||||||||| |||||| ||||||||||||||||| |||||||||| ||||||||    
T  11801462 taggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttt 11801363  T
Q  389 tattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacaccta 488  Q
    ||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||| ||||||| ||||||||||||||||  ||||||||    
T  11801362 tattcaatttggtccaattttgataattttaatcccctcaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcattaacaccta 11801263  T
Q  489 atttatttactttctt 504  Q
    ||||||||||||||||    
T  11801262 atttatttactttctt 11801247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 34996840 - 34996664
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||| ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||       
T  34996840 attcaatttagtcccataagtcttaactttctcaaatacgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatctcctaaa 34996741  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
         |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34996740 aaaacagaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 34996664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 289 - 506
Target Start/End: Original strand, 32347806 - 32348023
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    |||||||||||||||||| |||| ||||| |||        |||||||||||||  |||||| ||||||||||||||||| |||||||| | ||||||||    
T  32347806 taggcttaattgatctgctggttccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaagtgatttcttt 32347905  T
Q  389 tattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacaccta 488  Q
    ||||||||||||||||||||||||||||||||||| ||       |||| ||||||||||||| | |||||||||||||||||||||||| |||||||||    
T  32347906 tattcaatttggtccaattttgataattttaatcccctaaaaaaagagaacgttggattacgggggtctatcagattttatagtgtatcatcaacaccta 32348005  T
Q  489 atttatttactttcttct 506  Q
    ||||||||||||||||||    
T  32348006 atttatttactttcttct 32348023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 3000872 - 3000696
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||       
T  3000872 attcaatttggtcccataaatcttaactttctcaaacacctcccttaacttatttcttttattcaatttagtccaattttgataattttaatcccctaaa 3000773  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
         ||| |||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3000772 aacacagatcgttggattacgaaggtctatcagattttatagtgtatcactaacacctaatttatttactttcttct 3000696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 32713962 - 32713786
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||| |||||| |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       
T  32713962 attcagtttggttccataaatcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatcccctaaa 32713863  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        | |||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  32713862 aaaagtgaccgttggattacggaggtctataagattttacagtgtatcaccaacacctaatttatttactttcttct 32713786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 330 - 506
Target Start/End: Original strand, 34995391 - 34995566
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| ||||||||||||| ||       
T  34995391 attcaatttggtctcataagtcttaactttctcaaacacgtct-ttaacttatttcttttattcaatttggtccaattttaataattttaatcccctaaa 34995489  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
         |||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34995490 aaaacagaccgttagattacgaaggtctatcagattttatagtgtatcaccaacatctaatttatttactttcttct 34995566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 290 - 506
Target Start/End: Original strand, 18572884 - 18573099
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||   ||||||||        ||||||||||||||||||||| |||||||||| ||| || ||||||||||||||||||||    
T  18572884 aggcttaattgatctgccggtccgttaacttatttcttttattcaatttggtcccataagtcttaactttcttaaaaacgtcccttaacttatttctttt 18572983  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    |||||| |||| |||||||||||||||||||||| ||       || || |||||||||||||| ||||||| |||||| |||||||||||||||| |||    
T  18572984 attcaaattgggccaattttgataattttaatcccct-aaaaaagacactgttggattacggaggtctatcaaattttacagtgtatcaccaacacataa 18573082  T
Q  490 tttatttactttcttct 506  Q
    |||||||||||||||||    
T  18573083 tttatttactttcttct 18573099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 287 - 506
Target Start/End: Original strand, 32712351 - 32712570
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    |||||| |||||||||||| ||||  |||||||||        ||||| |||||||| |||| | |||  ||||||||| || || ||||||||||||||    
T  32712351 tttaggtttaattgatctgtcggtcccttaacttatttcttttattcagtttggtcctataaatcttacatttctcaaatacgtctcttaacttatttct 32712450  T
Q  387 tttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacc 486  Q
    ||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  32712451 tttattcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtaccaccaacacc 32712550  T
Q  487 taatttatttactttcttct 506  Q
    ||| ||||||||||||||||    
T  32712551 taacttatttactttcttct 32712570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 345 - 506
Target Start/End: Complemental strand, 19383218 - 19383058
Alignment:
Q  345 ataagttttaactttctcaaacacatcccttaacttatttctttt--attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgtt 442  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||  |||||||||| || |||||||||||||||||| | ||       |||||||||    
T  19383218 ataagtcttaactttctcaaacacgtcccttaacttattttttttttattcaatttgatctaattttgataattttaatgccctaaaaa--gagaccgtt 19383121  T
Q  443 ggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    ||||||||  | |||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  19383120 ggattacgatggtctatcagattttatagtgtatca-caacatctaatttatttactttcttct 19383058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 330 - 423
Target Start/End: Complemental strand, 29479273 - 29479180
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatcc 423  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  29479273 attcaatctggtcccataagttttaactttctcaatcacgtcctttaacttatttcttttattcaatttggtccaattttaataatttcaatcc 29479180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 392 - 501
Target Start/End: Original strand, 21094506 - 21094615
Alignment:
Q  392 tcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatt 491  Q
    |||||||| |||||||||||||| |||||||| ||       |||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  21094506 tcaatttgatccaattttgataactttaatcccctaaaaaaagagaccgttggattacggaggtctactagattttatagtgtatcaccaacacctaatt 21094605  T
Q  492 tatttacttt 501  Q
    ||||||||||    
T  21094606 tatttacttt 21094615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 27719839 - 27719941
Alignment:
Q  394 aatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaattta 493  Q
    |||||| |||||||||||| |||||||||| ||       |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27719839 aatttgatccaattttgatgattttaatcccctaaaaaa-gagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaattta 27719937  T
Q  494 ttta 497  Q
    ||||    
T  27719938 ttta 27719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 286 - 403
Target Start/End: Complemental strand, 18574416 - 18574299
Alignment:
Q  286 atttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttc 385  Q
    |||| ||||||||||||||||||||  ||| |||||        |||||||||||| |||||||| ||||||||||||| ||| ||||| ||||||||||    
T  18574416 attttggcttaattgatctgccggtcccttgacttatttcttttattcaatttggttccataagtcttaactttctcaagcacgtccctgaacttatttc 18574317  T
Q  386 ttttattcaatttggtcc 403  Q
    ||||||||||||||||||    
T  18574316 ttttattcaatttggtcc 18574299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 440 - 506
Target Start/End: Complemental strand, 21095348 - 21095282
Alignment:
Q  440 gttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  21095348 gttggattacggaggtctaccagattttatagtgtatcaccaacacctaatttatttactttattct 21095282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 455 - 506
Target Start/End: Complemental strand, 18574267 - 18574216
Alignment:
Q  455 tctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  18574267 tctatcagattttatagtgtaccaccaacaccggatttatttactttcttct 18574216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 455 - 505
Target Start/End: Original strand, 29477904 - 29477954
Alignment:
Q  455 tctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||||||||    
T  29477904 tctaccagattttatggtgtatcaccaacacctgatttatttactttcttc 29477954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 435 - 492
Target Start/End: Original strand, 7628469 - 7628526
Alignment:
Q  435 agaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaattt 492  Q
    |||||||| ||||| ||||||||| ||||||| | |||||||||||||||||||||||    
T  7628469 agaccgttagattatggagatctaccagatttcacagtgtatcaccaacacctaattt 7628526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 442 - 501
Target Start/End: Complemental strand, 7629773 - 7629715
Alignment:
Q  442 tggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttacttt 501  Q
    ||||||||| |||| ||||||||||||||||||||| |||||| ||||||| ||||||||    
T  7629773 tggattacgaagatttatcagattttatagtgtatctccaacatctaattt-tttacttt 7629715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 403
Target Start/End: Complemental strand, 3000892 - 3000859
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||||||    
T  3000892 tcccttaacttatttcttttattcaatttggtcc 3000859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 402
Target Start/End: Original strand, 29477778 - 29477810
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||||||    
T  29477778 tcccttaacttatttcttttattcaatttggtc 29477810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 494
Target Start/End: Complemental strand, 13562273 - 13562214
Alignment:
Q  435 agaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttat 494  Q
    |||| ||||||| | ||||||| ||||||| | | |||||||||||||||||||||||||    
T  13562273 agactgttggataaaggagatccatcagatctaacagtgtatcaccaacacctaatttat 13562214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 458 - 494
Target Start/End: Original strand, 13561440 - 13561476
Alignment:
Q  458 atcagattttatagtgtatcaccaacacctaatttat 494  Q
    ||||||| | |||||||||||||||||||||||||||    
T  13561440 atcagatctaatagtgtatcaccaacacctaatttat 13561476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 402
Target Start/End: Original strand, 34995375 - 34995403
Alignment:
Q  374 ttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||    
T  34995375 ttaacttatttcttttattcaatttggtc 34995403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 2e-62; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 288 - 506
Target Start/End: Complemental strand, 19230194 - 19229976
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    ||||||||||||||||||||| |  ||||| |||        |||||||||||||| |||||| ||||||||||||||||| |||||||||| |||||||    
T  19230194 ttaggcttaattgatctgccgatcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttctt 19230095  T
Q  388 ttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacct 487  Q
    |||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||| ||||||| |||||||||||||||| |||||| |    
T  19230094 ttattcaatttggtccaattttgataattttaatcccctcaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcatcaacactt 19229995  T
Q  488 aatttatttactttcttct 506  Q
    |||||||||||||||||||    
T  19229994 aatttatttactttcttct 19229976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 293 - 506
Target Start/End: Original strand, 19228840 - 19229053
Alignment:
Q  293 cttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttatt 392  Q
    ||||||||||||||||||  ||||| |||        |||||||||||||| |||||| ||||||||||||||||| | |||||||| ||||||||||||    
T  19228840 cttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgttccttaactgatttcttttatt 19228939  T
Q  393 caatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaattt 492  Q
    ||||||||||||||||||||||||||||||| ||       |||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||    
T  19228940 caatttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctattagattttatagtgtatcatcaacacctaattt 19229039  T
Q  493 atttactttcttct 506  Q
    ||||||||||||||    
T  19229040 atttactttcttct 19229053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 287 - 506
Target Start/End: Original strand, 12372310 - 12372529
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| || |||||||||||| |    
T  12372310 tttaggcttaattgatctgccggtcccttaacttatttgttttattcaatttggtctcataagtcttaactttctcaaacacgtctcttaacttatttgt 12372409  T
Q  387 tttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacc 486  Q
    ||||||||||||| ||||||||||||||||||||| | ||        | |||||||||||||| || ||||||||||||||||||||||||||||||||    
T  12372410 tttattcaatttgatccaattttgataattttaataccctaaaaaaacataccgttggattacgaaggtctatcagattttatagtgtatcaccaacacc 12372509  T
Q  487 taatttatttactttcttct 506  Q
    ||||||||||||||||||||    
T  12372510 taatttatttactttcttct 12372529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 291 - 489
Target Start/End: Complemental strand, 9083414 - 9083216
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||||||||| | |        ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| |||||    
T  9083414 ggcttaattgatctgccggtttcttaattcatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaacttttttatttta 9083315  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    ||||||||||||||||||||||||||||||||| ||       ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||    
T  9083314 ttcaatttggtccaattttgataattttaatcccctaaaaaaggagaccgttggattacgaaggtctataagattttatagtgtatcaccaacacctaa 9083216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 290 - 501
Target Start/End: Complemental strand, 39350764 - 39350553
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    ||||||||||||| |||||||  |||||||||        ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  39350764 aggcttaattgatatgccggtcccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaacttatttctttt 39350665  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    | | |||||||||||||||| ||||||||||||| ||       |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  39350664 acttaatttggtccaatttttataattttaatcctctaaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaa 39350565  T
Q  490 tttatttacttt 501  Q
    ||| ||| ||||    
T  39350564 tttttttgcttt 39350553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 290 - 494
Target Start/End: Original strand, 18654295 - 18654500
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||  ||||| |||        ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  18654295 aggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaacttatttctttt 18654394  T
Q  390 att-caatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacaccta 488  Q
    |||  ||||||||||||||||||| ||||||||||  |       |||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  18654395 attaaaatttggtccaattttgatcattttaatcccattaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacaccta 18654494  T
Q  489 atttat 494  Q
    ||||||    
T  18654495 atttat 18654500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 13278310 - 13278134
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||  |       
T  13278310 attcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttttttacttcaatttgatccaattttgataattttaatcccataga 13278211  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13278210 aaaagagaccgttggattagggaggtctatcagattttatagtgtatcaccaacacctaatttatttactttattct 13278134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 289 - 493
Target Start/End: Original strand, 9081977 - 9082181
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    |||||||||||||||| |||||| ||||||| |        |||||||||| | |||||||| ||||||||||||||||| |||||||||||||||||||    
T  9081977 taggcttaattgatctaccggttccttaactcatttcttttattcaatttgattccataagtcttaactttctcaaacacgtcccttaacttatttcttt 9082076  T
Q  389 tattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacaccta 488  Q
    ||||||||||||||||||||||||||||||||||| ||       ||||||||||||| |||||  |||||||||||||||||| |||| | ||||||||    
T  9082077 tattcaatttggtccaattttgataattttaatcccctagaaaatgagaccgttggatcacggatgtctatcagattttatagtatatcgctaacaccta 9082176  T
Q  489 attta 493  Q
    |||||    
T  9082177 attta 9082181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 289 - 495
Target Start/End: Complemental strand, 18655772 - 18655566
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||||||| |||||||||        ||||||||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||    
T  18655772 taggcttaattgatctgccggttccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtcccttaatttatttcttt 18655673  T
Q  389 tattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacaccta 488  Q
    ||||||||||||||||| ||||||||||||||||| ||       |||||||||| |||||| |  ||||||||||||||  ||||||||||||||  ||    
T  18655672 tattcaatttggtccaactttgataattttaatcccctaaaaaaagagaccgttgaattacgaaagtctatcagattttacggtgtatcaccaacaatta 18655573  T
Q  489 atttatt 495  Q
    |||||||    
T  18655572 atttatt 18655566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 330 - 506
Target Start/End: Original strand, 39349519 - 39349695
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||||||||||| |||||| | ||||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||||| ||||||||||||| ||       
T  39349519 attcaatttggttccataactcttaactttctcaaacacgtcctttaacttatttcttttactcaatttggttcaatttttataattttaatcccctaaa 39349618  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        | ||||||| |||||||||| ||||| ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  39349619 aaaagtgaccgtttgattacggaggtctattagattttatcgtggatcaccaacacctaatttatttactttcttct 39349695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 330 - 506
Target Start/End: Original strand, 39164095 - 39164269
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||| ||| ||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||       
T  39164095 attcaatttagtctcataagtcttaactttatcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgat-attttaatcc-cttaa 39164192  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
         |||| |||| |||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  39164193 aaaaaagactgttgaattacggaggcctatcaaattttatagtgtatcaccaacacctaatttatttacttttttct 39164269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 12373800 - 12373620
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatc----cac 425  Q
    ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||     |     
T  12373800 attcaatttagtcccataagtcttaactttctcaaacacgtcccttaacttatttattttattcaatttggtccaattttgataattttaatcaaaaaaa 12373701  T
Q  426 tnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
             |||||||||||||||| |  |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  12373700 aaaaaaaacagaccgttggattacgaatgtctatcagattttacactgtatcaccaacacctaatttatttactttcttct 12373620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 287 - 506
Target Start/End: Original strand, 13276815 - 13277026
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  |||||||||        |||||||||||||| |||| | |||| |||||||||||| |||||||||||||||||    
T  13276815 tttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataaatcttaattttctcaaacacgtcccttaacttatttct 13276914  T
Q  387 tttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacc 486  Q
    |||||||||||||||| ||||||||||||||||||||  |        ||||||||||||||||||| | ||||| ||||||        ||||||||||    
T  13276915 tttattcaatttggtcaaattttgataattttaatcccttaaaaaaaaagaccgttggattacggaggtgtatcacatttta--------caccaacacc 13277006  T
Q  487 taatttatttactttcttct 506  Q
    ||||||||||||||||||||    
T  13277007 taatttatttactttcttct 13277026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 334 - 506
Target Start/End: Complemental strand, 6803699 - 6803528
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnn 433  Q
    ||||||||| ||||||| |||| |||||||||||  |  |||||||||||||||||||||||||||||||||||||||||||||||||||  |           
T  6803699 aatttggtcacataagtcttaattttctcaaacatgtttcttaacttatttcttttattcaatttggtccaattttgataattttaatcctttaaaaaaa 6803600  T
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
     |||||||| ||||||  || |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6803599 cagaccgttagattacaaag-tctatcagattttatagtgtatcaccaacatctaatttatttactttcttct 6803528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 373 - 506
Target Start/End: Original strand, 4031903 - 4032038
Alignment:
Q  373 cttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagt 472  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||       |||||||||| ||||||||  |||| |||||||||||||    
T  4031903 cttaacttatttcttttattcaatttagtccaattttgataattttaatccactaaaaaaagagaccgttgaattacggaagtctaccagattttatagt 4032002  T
Q  473 gtatcaccaacacctaatt--tatttactttcttct 506  Q
    |||||||||||||||||||  |||||||||||||||    
T  4032003 gtatcaccaacacctaatttatatttactttcttct 4032038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 369 - 506
Target Start/End: Complemental strand, 4033065 - 4032928
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagatttta 468  Q
    |||| ||||||||||| ||||||| || ||||||||||||| ||||||||||||||||       |||||||||||||||||||| ||||||||||||||    
T  4033065 atcctttaacttattttttttatttaacttggtccaattttaataattttaatccactaaaaaaagagaccgttggattacggaggtctatcagatttta 4032966  T
Q  469 tagtgtatcaccaacacctaatttatttactttcttct 506  Q
    || |||||||  |||||||| |||||||||||||||||    
T  4032965 taatgtatcattaacacctagtttatttactttcttct 4032928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 8447077 - 8447185
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    |||||||||||||| |||||  |||||||||        ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8447077 ggcttaattgatctaccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttctttta 8447176  T
Q  391 ttcaatttg 399  Q
    |||||||||    
T  8447177 ttcaatttg 8447185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 6802017 - 6802075
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttatt 392  Q
    ||||||||| ||||||| |||| |||||||||||| |||||||||||||||||||||||    
T  6802017 aatttggtctcataagtcttaattttctcaaacacgtcccttaacttatttcttttatt 6802075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 30213403 - 30213498
Alignment:
Q  79 gaaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaatttttgtgttaaaatacaatagcggatccgaatccgctacccgc 174  Q
    ||||||||||||||||||| ||||| ||||| ||| |||||||||| ||| |||||  ||||||||   ||||| |||||  |||||||| |||||    
T  30213403 gaaatccccaaaatgcccttaaaatggttttaaaattagggtcaatgtgggattttcctgttaaaacctaatagtggatcaaaatccgctgcccgc 30213498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 40172584 - 40172692
Alignment:
Q  59 gaaaatgttaaggttaatttgaaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaa---tttttgtgttaaaatacaatagcgg 155  Q
    ||||| ||||||||||||| ||||| ||||||||||||   ||| |||||  ||| |||||||||||||| |   ||||| |||| ||||||||||| ||    
T  40172584 gaaaaggttaaggttaattcgaaattcccaaaatgcccatgaaacagtttaaaaattagggtcaatttgggatcttttttatgtttaaatacaatagggg 40172683  T
Q  156 atccgaatc 164  Q
    ||| |||||    
T  40172684 atcagaatc 40172692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 403
Target Start/End: Original strand, 8447096 - 8447129
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||||||    
T  8447096 tcccttaacttatttcttttattcaatttggtcc 8447129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 505
Target Start/End: Original strand, 42962162 - 42962232
Alignment:
Q  435 agaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||||||||||| | |||| ||||| |||| | || |||||||||||||||||||||   |||||||||||    
T  42962162 agaccgttggataaaggaggtctataagatctaatggtgtatcaccaacacctaattatattactttcttc 42962232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 3944750 - 3944702
Alignment:
Q  373 cttaacttatttcttttattcaatttggtccaattttgataattttaat 421  Q
    |||||||||||  ||||||| |||||| ||||||||| |||||||||||    
T  3944750 cttaacttattatttttatttaatttgatccaattttaataattttaat 3944702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 402
Target Start/End: Complemental strand, 35952531 - 35952503
Alignment:
Q  374 ttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||    
T  35952531 ttaacttatttcttttattcaatttggtc 35952503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 113; Significance: 6e-57; HSPs: 2)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 289 - 501
Target Start/End: Complemental strand, 3147 - 2934
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||| ||  |||||||||        ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  3147 taggcttaattgatctgccagtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcagacacgtcccttaacttatttcttt 3048  T
Q  389 tattcaatttggtccaattttgataattttaatcc-actnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacct 487  Q
    ||||||||||||||||||||||||||||||||||| |          |||||||| ||||||| || |||||||||||||||||||||||||||||||||    
T  3047 tattcaatttggtccaattttgataattttaatccaaaaaaaaaaacagaccgttagattacgaaggtctatcagattttatagtgtatcaccaacacct 2948  T
Q  488 aatttatttacttt 501  Q
    ||||||||||||||    
T  2947 aatttatttacttt 2934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 370 - 506
Target Start/End: Original strand, 1848 - 1983
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttat 469  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||          |||||||| ||||||| |  ||||| |||||||      
T  1848 tcccttaacttatttcttttattcaatttggtccaatttt-ataattttaatccaaaaaaaatatagaccgttagattacgaatgtctattagattttcc 1946  T
Q  470 agtgtatcaccaacacctaatttatttactttcttct 506  Q
    |||||||||||||||||||||||||||||||||||||    
T  1947 agtgtatcaccaacacctaatttatttactttcttct 1983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 6e-57; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 288 - 501
Target Start/End: Complemental strand, 27892457 - 27892244
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    |||||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||    
T  27892457 ttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcagacacgtcccttaacttatttctt 27892358  T
Q  388 ttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacct 487  Q
    |||||||||||| |||||||||||||||||||||| |          |||||||| ||||||| || |||||||||||||||||||||||||||||||||    
T  27892357 ttattcaatttgatccaattttgataattttaatcaaaaaaaaaaacagaccgttagattacgaaggtctatcagattttatagtgtatcaccaacacct 27892258  T
Q  488 aatttatttacttt 501  Q
    ||||||||||||||    
T  27892257 aatttatttacttt 27892244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 330 - 506
Target Start/End: Original strand, 16602764 - 16602940
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||          
T  16602764 attcaatttggtcccataagtcttaactttctcaaacacgtcccttaacttatttcttttatttaaattggtccaattttgataattttaatccctaaaa 16602863  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
         ||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16602864 aaaaaagaccgttggattacggatgtctatcagattttacagtgtatcaccaacacctaatttatttactttcttct 16602940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 289 - 506
Target Start/End: Original strand, 27891104 - 27891321
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||||||  |||||||||        ||||||||||||| |||| || ||||||||||||||||| |||||||||||||||||||    
T  27891104 taggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataggtcttaactttctcaaacacgtcccttaacttatttcttt 27891203  T
Q  389 tattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacaccta 488  Q
    |||||| |||||| |||||||||||||||||||  |          |||||||| ||||||| |  |||||||||||||  |||||||||||||||||||    
T  27891204 tattcattttggttcaattttgataattttaataaaaaaaaaaaacagaccgttagattacgaatgtctatcagattttccagtgtatcaccaacaccta 27891303  T
Q  489 atttatttactttcttct 506  Q
    ||||||||||||||||||    
T  27891304 atttatttactttcttct 27891321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 330 - 506
Target Start/End: Complemental strand, 38244034 - 38243858
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    ||||| ||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||       
T  38244034 attcattttggtcccataagtcttaactttttcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatctcctaaa 38243935  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
        || || ||||||||||  || | ||| |||||||| ||||||| ||||||||| |||||||||||||||||||    
T  38243934 aaaagatactgttggattacaaaggtgtataagattttacagtgtattaccaacaccaaatttatttactttcttct 38243858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 330 - 489
Target Start/End: Original strand, 23833007 - 23833165
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnn 429  Q
    |||| |||||||||||||||| ||||||||||||||||| ||| ||||||| ||| ||||||||||||| |||||||||||||||||||||||| ||       
T  23833007 attccatttggtcccataagtcttaactttctcaaacacgtcc-ttaacttttttattttattcaatttagtccaattttgataattttaatcccctaaa 23833105  T
Q  430 nnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
         ||||||||||||||||||| ||||  |||||||||||||||||| ||||||||||    
T  23833106 aaagaagaccgttggattacggaggtctagaagattttatagtgtatcatcaacacctaa 23833165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 293 - 468
Target Start/End: Original strand, 26388220 - 26388395
Alignment:
Q  293 cttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttatt 392  Q
    ||||||||||||| |||| ||||||||||        |||||||||| || ||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  26388220 cttaattgatctgtcggtctcttaacttattttttttattcaatttgatctcataagtcttaactttctcaaacacgtcctttaacttatttcttttatt 26388319  T
Q  393 caatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagatttta 468  Q
     |||||| | |||||||||||||||||||||  |        |||||||| |||||||||| ||||||||||||||    
T  26388320 taatttgattcaattttgataattttaatcccatataaaaaaagaccgtttgattacggaggtctatcagatttta 26388395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 351 - 506
Target Start/End: Original strand, 38242943 - 38243095
Alignment:
Q  351 tttaactttctcaaacacatcccttaacttatttcttttattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacg 450  Q
    ||||||||| |||||||  || |||||||||||||||||||| |||||| ||||||||||||||||||||||  ||       ||||||||||||||||     
T  38242943 tttaactttttcaaacatgtctcttaacttatttcttttatttaatttgatccaattttgataattttaatctcctaaaaaaagagaccgttggattaca 38243042  T
Q  451 gagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
     ||   ||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  38243043 aag---tataagattttataatgtatcaccaacaccaaatttatttactttcttct 38243095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 290 - 403
Target Start/End: Complemental strand, 16604308 - 16604195
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    ||||||||||||||| |||||  |||||||||        ||||||||||||||||||||| |||| |||||||| ||| ||||| ||||||||||||||    
T  16604308 aggcttaattgatctaccggtcccttaacttatttcttttattcaatttggtcccataagtcttaagtttctcaagcacgtccctgaacttatttctttt 16604209  T
Q  390 attcaatttggtcc 403  Q
    ||||||||||||||    
T  16604208 attcaatttggtcc 16604195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 381
Target Start/End: Complemental strand, 23833991 - 23833898
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaactta 381  Q
    |||||||||||||||||||||||  |||||||||        |||||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  23833991 ttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcccttaactta 23833898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 43814560 - 43814629
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    ||||||||| ||| ||||||| |||||||||||||| || ||| ||||||||||||||||||||||||||    
T  43814560 attcaatttcgtctcataagtcttaactttctcaaatacgtcctttaacttatttcttttattcaatttg 43814629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 434 - 505
Target Start/End: Original strand, 5033602 - 5033673
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 505  Q
    |||| |||||||| |  |||||||| |||||||||||||||||||||||||  |||||||||||||||||||    
T  5033602 gagatcgttggataagagagatctaccagattttatagtgtatcaccaacatttaatttatttactttcttc 5033673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 5033517 - 5033566
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  5033517 attcaatttggtcctataacttttaactttctcaaatacatcccttaact 5033566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 15496084 - 15496133
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    ||||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  15496084 attcaatttggtcccataagtcttaactttcacaaacacgtcccttaact 15496133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 334 - 379
Target Start/End: Complemental strand, 5034891 - 5034846
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||| | |||| ||||||||||||||||||||||||||||||    
T  5034891 aatttggttctataacttttaactttctcaaacacatcccttaact 5034846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 501
Target Start/End: Complemental strand, 5034810 - 5034743
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttacttt 501  Q
    |||| |||||||| |  ||| |||| ||||||||| |||||||||||||||| | |||||||||||||    
T  5034810 gagatcgttggataagagaggtctaacagattttagagtgtatcaccaacacttgatttatttacttt 5034743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 501
Target Start/End: Complemental strand, 12365996 - 12365929
Alignment:
Q  434 gagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaatttatttacttt 501  Q
    ||||||||||||| |  |||||||||||||| | |  ||||||||||||||||| |||||||| ||||    
T  12365996 gagaccgttggataaatgagatctatcagatataactgtgtatcaccaacacctgatttattttcttt 12365929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 506
Target Start/End: Complemental strand, 16604163 - 16604112
Alignment:
Q  455 tctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    |||| |||||||||||||||| |||||||||   ||||||||||||||||||    
T  16604163 tctaccagattttatagtgtaccaccaacactggatttatttactttcttct 16604112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 403
Target Start/End: Original strand, 5033501 - 5033530
Alignment:
Q  374 ttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||    
T  5033501 ttaacttatttcttttattcaatttggtcc 5033530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 403
Target Start/End: Original strand, 16602744 - 16602777
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    |||||||| |||||||||||||||||||||||||    
T  16602744 tcccttaatttatttcttttattcaatttggtcc 16602777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 403
Target Start/End: Complemental strand, 19577425 - 19577392
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||| ||||||||||||    
T  19577425 tcccttaacttatttcttttagtcaatttggtcc 19577392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 399
Target Start/End: Complemental strand, 23833969 - 23833940
Alignment:
Q  370 tcccttaacttatttcttttattcaatttg 399  Q
    ||||||||||||||||||||||||||||||    
T  23833969 tcccttaacttatttcttttattcaatttg 23833940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 43631967 - 43632040
Alignment:
Q  99 aaaatagttttgaaagtagggtcaatttggaatttttg-tgttaaaatacaatagcggatccgaatccgctacc 171  Q
    ||||| ||||| ||| ||||||||| |||  ||||||  ||||||||| |||||||||||| ||||||||||||    
T  43631967 aaaatggttttaaaattagggtcaacttgcgatttttcctgttaaaatccaatagcggatcagaatccgctacc 43632040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 398
Target Start/End: Original strand, 43814540 - 43814568
Alignment:
Q  370 tcccttaacttatttcttttattcaattt 398  Q
    |||||||||||||||||||||||||||||    
T  43814540 tcccttaacttatttcttttattcaattt 43814568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 291 - 492
Target Start/End: Original strand, 31033 - 31234
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  31033 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctcaacttatttctttta 31132  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
     ||||||||||||| |||| ||||||||||||| ||        ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31133 ctcaatttggtccagtttttataattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaat 31232  T
Q  491 tt 492  Q
    ||    
T  31233 tt 31234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 291 - 492
Target Start/End: Complemental strand, 35403 - 35202
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||| ||||  |||||||||        ||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  35403 ggcttaattgatctggcggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccctcaacttatttctttta 35304  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
     |||||||||||||||||| ||||||||||||| ||        ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  35303 ctcaatttggtccaatttttataattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaat 35204  T
Q  491 tt 492  Q
    ||    
T  35203 tt 35202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 291 - 492
Target Start/End: Original strand, 79409 - 79610
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||| ||||  |||||||||        ||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  79409 ggcttaattgatctggcggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccctcaacttatttctttta 79508  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
     |||||||||||||||||| ||||||||||||| ||        ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  79509 ctcaatttggtccaatttttataattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaat 79608  T
Q  491 tt 492  Q
    ||    
T  79609 tt 79610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 291 - 492
Target Start/End: Complemental strand, 83779 - 83578
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  83779 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctcaacttatttctttta 83680  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaat 490  Q
     ||||||||||||| |||| ||||||||||||| ||        ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  83679 ctcaatttggtccagtttttataattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaat 83580  T
Q  491 tt 492  Q
    ||    
T  83579 tt 83578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 290 - 506
Target Start/End: Complemental strand, 1720 - 1504
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||  |||||||||        |||||||||||| |||||||| ||||||||||||||||| ||| |||| ||||||| |||    
T  1720 aggcttaattgatctgccggtcccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacacgtcctttaatttatttccttt 1621  T
Q  390 attcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    ||||||||||||||||||||||||||||||||||  |        ||||||||||||||  ||| ||||||||||||||  |||||| ||||||||||||    
T  1620 attcaatttggtccaattttgataattttaatcccttaaaaaaacagaccgttggattatagaggtctatcagattttacggtgtataaccaacacctaa 1521  T
Q  490 tttatttactttcttct 506  Q
    ||| |||||||||||||    
T  1520 tttttttactttcttct 1504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 289 - 501
Target Start/End: Original strand, 132 - 343
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||| ||  |||||||||        |||||||||| |||||||||| ||||||||||||||||| ||| |||| ||||||| ||    
T  132 taggcttaattgatctgccagtcccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcctttaatttatttcctt 231  T
Q  389 tattcaatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacaccta 488  Q
    |||||||||||||| |||||||||||||||||| |  |       |||||||||||||||| ||| |||||||||||||| || ||||||||||||||||    
T  232 tattcaatttggtcaaattttgataattttaattccttaaaaaaagagaccgttggattacagaggtctatcagattttacagcgtatcaccaacaccta 331  T
Q  489 atttatttacttt 501  Q
    |||| ||||||||    
T  332 attt-tttacttt 343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 291 - 501
Target Start/End: Complemental strand, 25463 - 25252
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    |||||||||||||||||| |  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  25463 ggcttaattgatctgccgctcccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtcccttaatttatttctttta 25364  T
Q  391 ttcaatttggtccaattttgataattttaatccactnnnnnnnga-gaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaa 489  Q
    || |||||||||||||||||||||||||||||   |       || ||| |||||||||||||| | ||||| |||||||||||||| | ||||||||||    
T  25363 ttaaatttggtccaattttgataattttaatcatttaaaacaagaggacagttggattacggaggtttatcacattttatagtgtattatcaacacctaa 25264  T
Q  490 tttatttacttt 501  Q
    ||||||||||||    
T  25263 tttatttacttt 25252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 64; Significance: 1e-27; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 286 - 397
Target Start/End: Original strand, 104296 - 104407
Alignment:
Q  286 atttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttc 385  Q
    ||||||||||||||||| || ||||  |||||||||        ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  104296 atttaggcttaattgatttgacggtcccttaacttatttcttttattcaatttggtcccataagttttaacattctcaaacacgtcccttaacttatttc 104395  T
Q  386 ttttattcaatt 397  Q
    ||||||||||||    
T  104396 ttttattcaatt 104407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 445 - 506
Target Start/End: Original strand, 104405 - 104466
Alignment:
Q  445 attacggagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttct 506  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  104405 attacggaggtctatcagattttatagtgtatcaccaacatctaatttatttactttcttct 104466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 403
Target Start/End: Original strand, 104320 - 104353
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtcc 403  Q
    ||||||||||||||||||||||||||||||||||    
T  104320 tcccttaacttatttcttttattcaatttggtcc 104353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 9261 - 9363
Alignment:
Q  394 aatttggtccaattttgataattttaatccactnnnnnnngagaccgttggattacggagatctatcagattttatagtgtatcaccaacacctaattta 493  Q
    |||||| |||||||||||| |||||||||| ||       |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9261 aatttgatccaattttgatgattttaatcccctaaaaaa-gagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaattta 9359  T
Q  494 ttta 497  Q
    ||||    
T  9360 ttta 9363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 496
Target Start/End: Complemental strand, 29167 - 29122
Alignment:
Q  451 gagatctatcagattttatagtgtatcaccaacacctaatttattt 496  Q
    |||||||||||||| | | |||||||||| ||||||||||||||||    
T  29167 gagatctatcagatctaagagtgtatcactaacacctaatttattt 29122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1594 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1594
Description:

Target: scaffold1594; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 344 - 260
Alignment:
Q  63 atgttaaggttaatttgaaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaatttttgtgttaaaatac 147  Q
    ||||| |||||||||||||||  | ||||| ||||  |||| ||||| |||  ||||||||||| | |||||| |||||||||||    
T  344 atgttgaggttaatttgaaatatctaaaataccctcgaaatggttttaaaatcagggtcaatttaggatttttttgttaaaatac 260  T

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Target: scaffold1549 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1549
Description:

Target: scaffold1549; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 1252 - 1336
Alignment:
Q  63 atgttaaggttaatttgaaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaatttttgtgttaaaatac 147  Q
    ||||| |||||||||||||||  | ||||| ||||  |||| ||||| |||  ||||||||||| | |||||| |||||||||||    
T  1252 atgttgaggttaatttgaaatatctaaaataccctcgaaatggttttaaaatcagggtcaatttaggatttttttgttaaaatac 1336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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