View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0946_high_11 (Length: 254)

Name: NF0946_high_11
Description: NF0946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0946_high_11
NF0946_high_11
[»] chr6 (27 HSPs)
chr6 (21-241)||(19638001-19638229)
chr6 (162-235)||(31622994-31623067)
chr6 (162-242)||(33549104-33549184)
chr6 (162-243)||(12188298-12188379)
chr6 (182-238)||(10338174-10338230)
chr6 (185-244)||(14278105-14278164)
chr6 (162-240)||(14557962-14558040)
chr6 (182-243)||(20863395-20863456)
chr6 (162-239)||(30127400-30127477)
chr6 (182-242)||(6385882-6385942)
chr6 (182-244)||(6776601-6776663)
chr6 (162-236)||(13661521-13661594)
chr6 (181-243)||(20213060-20213122)
chr6 (181-243)||(22107083-22107145)
chr6 (162-243)||(13330087-13330168)
chr6 (192-241)||(23910108-23910157)
chr6 (182-242)||(12234503-12234563)
chr6 (181-244)||(28363956-28364019)
chr6 (186-244)||(4105075-4105133)
chr6 (208-242)||(10650035-10650069)
chr6 (182-240)||(21418490-21418548)
chr6 (182-240)||(34444823-34444881)
chr6 (181-229)||(3779358-3779406)
chr6 (165-213)||(13441053-13441101)
chr6 (162-238)||(14199947-14200023)
chr6 (181-241)||(21836769-21836829)
chr6 (182-242)||(28841434-28841494)
[»] chr5 (31 HSPs)
chr5 (162-244)||(34984806-34984888)
chr5 (162-244)||(14285161-14285243)
chr5 (162-244)||(25627057-25627139)
chr5 (162-244)||(7918463-7918545)
chr5 (162-228)||(30883208-30883274)
chr5 (162-238)||(87423-87499)
chr5 (162-244)||(16773807-16773889)
chr5 (161-243)||(21549132-21549214)
chr5 (162-244)||(22737082-22737164)
chr5 (162-244)||(29075781-29075863)
chr5 (162-243)||(17028259-17028340)
chr5 (162-242)||(14495801-14495881)
chr5 (162-242)||(29692382-29692462)
chr5 (181-244)||(43442215-43442278)
chr5 (181-246)||(17155843-17155906)
chr5 (186-243)||(25979194-25979251)
chr5 (162-243)||(26078046-26078127)
chr5 (162-242)||(8278271-8278351)
chr5 (164-244)||(18595995-18596075)
chr5 (181-244)||(37258360-37258423)
chr5 (162-232)||(892480-892550)
chr5 (182-228)||(16457830-16457876)
chr5 (162-244)||(21589288-21589370)
chr5 (182-238)||(30109308-30109364)
chr5 (189-240)||(84851-84902)
chr5 (185-232)||(4793094-4793141)
chr5 (166-237)||(16436622-16436692)
chr5 (181-236)||(37148045-37148100)
chr5 (162-232)||(19043458-19043528)
chr5 (161-237)||(5390853-5390927)
chr5 (162-243)||(6844729-6844810)
[»] chr3 (59 HSPs)
chr3 (162-244)||(27093355-27093437)
chr3 (162-243)||(37788460-37788541)
chr3 (161-244)||(16354886-16354969)
chr3 (165-244)||(53412948-53413027)
chr3 (162-244)||(28703398-28703480)
chr3 (162-244)||(46518628-46518710)
chr3 (162-242)||(14186648-14186727)
chr3 (162-244)||(10445133-10445216)
chr3 (162-241)||(30311306-30311385)
chr3 (162-244)||(4222141-4222223)
chr3 (186-244)||(27259185-27259243)
chr3 (181-243)||(32651433-32651495)
chr3 (162-243)||(36720381-36720462)
chr3 (162-242)||(31520601-31520681)
chr3 (162-242)||(47810740-47810820)
chr3 (162-237)||(8170672-8170747)
chr3 (161-244)||(31788964-31789047)
chr3 (162-240)||(54990703-54990780)
chr3 (162-244)||(34062542-34062626)
chr3 (163-240)||(47454615-47454692)
chr3 (182-242)||(21960571-21960631)
chr3 (181-240)||(8368797-8368856)
chr3 (201-240)||(17108896-17108935)
chr3 (183-242)||(51903874-51903933)
chr3 (181-243)||(8075122-8075184)
chr3 (182-240)||(14339630-14339688)
chr3 (162-244)||(15048055-15048137)
chr3 (182-232)||(17554791-17554841)
chr3 (166-240)||(49494144-49494218)
chr3 (182-243)||(2667882-2667943)
chr3 (169-242)||(4844507-4844580)
chr3 (169-242)||(4870203-4870276)
chr3 (182-239)||(44069778-44069835)
chr3 (181-233)||(7975437-7975489)
chr3 (162-242)||(10499105-10499185)
chr3 (200-244)||(31608518-31608562)
chr3 (200-244)||(39253735-39253779)
chr3 (162-242)||(51766896-51766975)
chr3 (200-243)||(3427548-3427591)
chr3 (162-241)||(19154631-19154710)
chr3 (162-232)||(3054994-3055064)
chr3 (182-240)||(19716217-19716275)
chr3 (162-244)||(26505355-26505437)
chr3 (182-240)||(47236969-47237027)
chr3 (163-240)||(18316497-18316573)
chr3 (193-242)||(20501727-20501776)
chr3 (162-239)||(26871503-26871580)
chr3 (182-243)||(30510194-30510255)
chr3 (189-242)||(44743851-44743904)
chr3 (162-238)||(8051214-8051290)
chr3 (162-206)||(9832497-9832541)
chr3 (188-240)||(16900679-16900731)
chr3 (182-242)||(26481947-26482007)
chr3 (182-238)||(27923043-27923099)
chr3 (182-242)||(32638965-32639025)
chr3 (201-241)||(33899653-33899693)
chr3 (196-244)||(36010776-36010824)
chr3 (203-243)||(40777054-40777093)
chr3 (164-232)||(42799754-42799821)
[»] chr7 (66 HSPs)
chr7 (162-244)||(26459404-26459486)
chr7 (162-243)||(43215184-43215265)
chr7 (162-241)||(30442488-30442567)
chr7 (162-240)||(22760863-22760941)
chr7 (162-243)||(39631844-39631925)
chr7 (162-242)||(17041008-17041088)
chr7 (161-240)||(20335829-20335908)
chr7 (162-244)||(2962460-2962541)
chr7 (162-243)||(18363696-18363777)
chr7 (162-243)||(23552118-23552199)
chr7 (162-244)||(17113795-17113877)
chr7 (162-228)||(25021345-25021411)
chr7 (162-231)||(42836008-42836077)
chr7 (182-242)||(14058273-14058333)
chr7 (182-242)||(14368301-14368361)
chr7 (181-244)||(7721388-7721451)
chr7 (181-240)||(21877827-21877886)
chr7 (181-244)||(33222389-33222452)
chr7 (182-240)||(5579232-5579290)
chr7 (183-241)||(29385740-29385798)
chr7 (162-244)||(30579335-30579417)
chr7 (162-244)||(33869439-33869521)
chr7 (182-240)||(43590927-43590985)
chr7 (162-243)||(5830598-5830679)
chr7 (162-242)||(2446308-2446388)
chr7 (162-242)||(5273586-5273666)
chr7 (164-244)||(7744106-7744186)
chr7 (161-241)||(23301599-23301679)
chr7 (165-244)||(4566422-4566501)
chr7 (185-244)||(21558151-21558210)
chr7 (162-241)||(31706425-31706504)
chr7 (181-240)||(42711977-42712036)
chr7 (162-232)||(7801180-7801250)
chr7 (181-243)||(9608624-9608686)
chr7 (181-243)||(9836196-9836258)
chr7 (162-244)||(15137553-15137635)
chr7 (162-240)||(18056773-18056851)
chr7 (182-232)||(19553474-19553523)
chr7 (162-244)||(25655222-25655304)
chr7 (183-244)||(38851277-38851338)
chr7 (162-239)||(39499718-39499795)
chr7 (167-244)||(41519258-41519335)
chr7 (184-240)||(15905672-15905727)
chr7 (162-242)||(22932707-22932787)
chr7 (161-237)||(31835191-31835267)
chr7 (162-242)||(45709704-45709784)
chr7 (183-242)||(5668567-5668626)
chr7 (209-244)||(11700212-11700247)
chr7 (161-228)||(23735237-23735304)
chr7 (162-213)||(45559200-45559251)
chr7 (165-224)||(45976937-45976996)
chr7 (187-242)||(48079668-48079723)
chr7 (182-237)||(48771958-48772013)
chr7 (198-244)||(2882986-2883032)
chr7 (182-228)||(3280495-3280541)
chr7 (182-240)||(11720958-11721016)
chr7 (162-232)||(25956299-25956368)
chr7 (182-244)||(29785295-29785357)
chr7 (182-240)||(38374597-38374655)
chr7 (162-232)||(48125181-48125250)
chr7 (167-240)||(7499922-7499995)
chr7 (211-244)||(13106776-13106809)
chr7 (200-244)||(9183185-9183229)
chr7 (183-227)||(28236592-28236636)
chr7 (208-240)||(29916806-29916838)
chr7 (169-221)||(36803644-36803696)
[»] chr4 (57 HSPs)
chr4 (165-243)||(7292793-7292871)
chr4 (162-244)||(37109345-37109427)
chr4 (162-244)||(7949448-7949530)
chr4 (181-243)||(23377975-23378037)
chr4 (162-244)||(31759652-31759734)
chr4 (181-232)||(16581712-16581763)
chr4 (162-244)||(37274453-37274536)
chr4 (181-244)||(38869787-38869850)
chr4 (162-240)||(5795407-5795485)
chr4 (181-242)||(2185028-2185089)
chr4 (182-242)||(49576890-49576950)
chr4 (184-244)||(53496899-53496959)
chr4 (160-244)||(2622389-2622477)
chr4 (181-244)||(4249196-4249259)
chr4 (161-240)||(39509069-39509148)
chr4 (161-240)||(55427198-55427277)
chr4 (162-240)||(19238575-19238653)
chr4 (162-244)||(19680782-19680864)
chr4 (162-232)||(24827825-24827895)
chr4 (162-240)||(37720212-37720290)
chr4 (162-244)||(46545711-46545793)
chr4 (188-228)||(47202433-47202473)
chr4 (162-244)||(1730483-1730565)
chr4 (181-243)||(8030199-8030261)
chr4 (162-240)||(8325377-8325455)
chr4 (162-240)||(46295097-46295175)
chr4 (186-239)||(5450117-5450170)
chr4 (181-242)||(13015446-13015507)
chr4 (166-242)||(24234649-24234725)
chr4 (183-244)||(33632130-33632191)
chr4 (190-239)||(46329192-46329241)
chr4 (162-244)||(15180741-15180820)
chr4 (188-240)||(32992638-32992690)
chr4 (183-239)||(40283985-40284041)
chr4 (160-236)||(42281236-42281311)
chr4 (162-238)||(51250522-51250598)
chr4 (181-244)||(10047999-10048062)
chr4 (165-232)||(20281198-20281265)
chr4 (209-244)||(21404815-21404850)
chr4 (181-240)||(30938217-30938276)
chr4 (169-244)||(44194978-44195053)
chr4 (182-244)||(11592147-11592209)
chr4 (166-228)||(13901746-13901808)
chr4 (182-228)||(17618301-17618347)
chr4 (165-203)||(33438513-33438551)
chr4 (198-244)||(51622521-51622567)
chr4 (162-243)||(12798684-12798765)
chr4 (183-244)||(19531996-19532057)
chr4 (162-243)||(29195095-29195175)
chr4 (181-241)||(8714698-8714758)
chr4 (162-238)||(31826609-31826685)
chr4 (188-240)||(37980146-37980197)
chr4 (189-237)||(38206127-38206174)
chr4 (165-221)||(41683752-41683808)
chr4 (182-242)||(51954134-51954194)
chr4 (184-244)||(52880164-52880224)
chr4 (188-240)||(56409977-56410028)
[»] chr1 (62 HSPs)
chr1 (162-244)||(36371470-36371552)
chr1 (164-244)||(33700767-33700847)
chr1 (162-244)||(4566548-4566630)
chr1 (162-244)||(10526823-10526905)
chr1 (162-244)||(9165189-9165271)
chr1 (162-244)||(51703779-51703861)
chr1 (165-241)||(15786317-15786393)
chr1 (162-244)||(21547474-21547556)
chr1 (181-244)||(8177176-8177239)
chr1 (159-242)||(19940868-19940951)
chr1 (186-244)||(3265948-3266006)
chr1 (160-240)||(952509-952589)
chr1 (162-242)||(2219972-2220052)
chr1 (156-240)||(19528325-19528409)
chr1 (162-226)||(31794276-31794340)
chr1 (162-238)||(37046985-37047060)
chr1 (181-244)||(2799881-2799944)
chr1 (161-240)||(16169976-16170055)
chr1 (166-240)||(4824975-4825049)
chr1 (181-243)||(6122813-6122875)
chr1 (166-244)||(17745250-17745328)
chr1 (162-244)||(21267987-21268069)
chr1 (162-240)||(25297772-25297850)
chr1 (162-243)||(11063556-11063637)
chr1 (163-242)||(18459227-18459307)
chr1 (177-241)||(31383795-31383859)
chr1 (163-243)||(44126396-44126476)
chr1 (197-244)||(1247148-1247195)
chr1 (181-244)||(6650614-6650677)
chr1 (191-242)||(12370192-12370243)
chr1 (162-244)||(29056377-29056460)
chr1 (181-244)||(52336768-52336831)
chr1 (162-244)||(8904414-8904496)
chr1 (156-242)||(34228868-34228953)
chr1 (182-240)||(36428732-36428790)
chr1 (162-228)||(40257399-40257465)
chr1 (208-242)||(51281397-51281431)
chr1 (182-232)||(52116787-52116837)
chr1 (191-240)||(17297013-17297062)
chr1 (183-244)||(27476765-27476826)
chr1 (162-243)||(27567117-27567198)
chr1 (162-242)||(50901581-50901662)
chr1 (162-238)||(41508831-41508907)
chr1 (162-242)||(51814494-51814574)
chr1 (165-236)||(24730387-24730458)
chr1 (181-224)||(44046162-44046205)
chr1 (181-244)||(50919973-50920036)
chr1 (200-242)||(17439955-17439997)
chr1 (182-240)||(35562745-35562803)
chr1 (201-239)||(38947471-38947509)
chr1 (182-240)||(52029935-52029993)
chr1 (183-240)||(31605846-31605903)
chr1 (162-239)||(37400274-37400351)
chr1 (183-240)||(43445984-43446041)
chr1 (162-242)||(1094525-1094605)
chr1 (186-242)||(9964462-9964518)
chr1 (186-242)||(12587294-12587350)
chr1 (168-240)||(27430125-27430197)
chr1 (188-240)||(38939228-38939279)
chr1 (162-238)||(39012291-39012366)
chr1 (188-244)||(39964531-39964586)
chr1 (200-244)||(40810505-40810549)
[»] chr2 (42 HSPs)
chr2 (162-241)||(42327392-42327471)
chr2 (162-244)||(42922414-42922497)
chr2 (162-243)||(11062360-11062441)
chr2 (162-242)||(42602554-42602634)
chr2 (162-240)||(29503271-29503349)
chr2 (162-244)||(40416384-40416466)
chr2 (162-243)||(19322768-19322849)
chr2 (181-244)||(11251106-11251169)
chr2 (161-244)||(19244108-19244191)
chr2 (162-244)||(1729816-1729898)
chr2 (162-240)||(37480075-37480153)
chr2 (163-244)||(16918572-16918653)
chr2 (162-244)||(4060208-4060290)
chr2 (181-243)||(21195671-21195733)
chr2 (162-244)||(34041582-34041664)
chr2 (186-242)||(4262298-4262354)
chr2 (161-240)||(19016030-19016109)
chr2 (182-240)||(23052521-23052579)
chr2 (182-240)||(39715012-39715070)
chr2 (162-244)||(45026743-45026825)
chr2 (182-238)||(12086129-12086185)
chr2 (162-238)||(12994376-12994452)
chr2 (162-237)||(28846691-28846766)
chr2 (181-244)||(30410543-30410606)
chr2 (162-240)||(3697398-3697475)
chr2 (162-244)||(13803495-13803577)
chr2 (182-240)||(21213789-21213847)
chr2 (162-243)||(5147674-5147755)
chr2 (162-242)||(7799031-7799111)
chr2 (188-240)||(12517751-12517803)
chr2 (162-238)||(43963989-43964064)
chr2 (162-241)||(26545840-26545919)
chr2 (162-241)||(30808644-30808723)
chr2 (162-244)||(14500277-14500359)
chr2 (182-228)||(30359674-30359720)
chr2 (169-242)||(23140908-23140981)
chr2 (169-242)||(23552698-23552771)
chr2 (183-240)||(26482114-26482170)
chr2 (188-240)||(6099517-6099568)
chr2 (162-230)||(16131670-16131738)
chr2 (181-237)||(17737625-17737681)
chr2 (181-221)||(29964834-29964874)
[»] scaffold0258 (1 HSPs)
scaffold0258 (160-242)||(15319-15401)
[»] scaffold0180 (1 HSPs)
scaffold0180 (181-244)||(19956-20019)
[»] scaffold0002 (1 HSPs)
scaffold0002 (165-232)||(94977-95044)
[»] chr8 (43 HSPs)
chr8 (164-242)||(3624582-3624660)
chr8 (162-240)||(16852340-16852418)
chr8 (162-244)||(18540298-18540380)
chr8 (162-240)||(19703485-19703563)
chr8 (162-243)||(44780109-44780190)
chr8 (181-244)||(8794339-8794402)
chr8 (164-230)||(2203494-2203560)
chr8 (162-244)||(12988428-12988510)
chr8 (186-244)||(33017238-33017296)
chr8 (182-242)||(968382-968442)
chr8 (162-229)||(5264544-5264611)
chr8 (181-244)||(6536539-6536602)
chr8 (162-244)||(13129668-13129750)
chr8 (161-243)||(30483879-30483961)
chr8 (162-239)||(11793520-11793597)
chr8 (161-232)||(26688864-26688935)
chr8 (181-244)||(35690058-35690121)
chr8 (181-243)||(11819795-11819857)
chr8 (182-240)||(28783080-28783138)
chr8 (182-243)||(27750750-27750811)
chr8 (162-238)||(11518877-11518953)
chr8 (161-244)||(20994451-20994535)
chr8 (182-238)||(29858049-29858105)
chr8 (182-244)||(23361643-23361705)
chr8 (162-232)||(23874388-23874458)
chr8 (162-239)||(18897166-18897243)
chr8 (182-242)||(22193360-22193420)
chr8 (208-240)||(28787494-28787526)
chr8 (161-241)||(29431010-29431090)
chr8 (162-242)||(35641897-35641977)
chr8 (188-240)||(40136961-40137012)
chr8 (162-241)||(3058046-3058125)
chr8 (183-242)||(4435996-4436055)
chr8 (165-240)||(18546360-18546435)
chr8 (182-244)||(6436549-6436611)
chr8 (162-240)||(6530807-6530884)
chr8 (162-240)||(32992778-32992858)
chr8 (188-232)||(3524407-3524451)
chr8 (182-242)||(7140729-7140789)
chr8 (182-242)||(12281514-12281574)
chr8 (162-242)||(22268930-22269009)
chr8 (186-242)||(34628666-34628722)
chr8 (200-240)||(36205233-36205273)
[»] scaffold0006 (2 HSPs)
scaffold0006 (181-244)||(18318-18381)
scaffold0006 (181-241)||(222528-222588)
[»] scaffold0299 (1 HSPs)
scaffold0299 (182-244)||(11548-11610)
[»] scaffold0291 (1 HSPs)
scaffold0291 (162-240)||(2468-2546)
[»] scaffold0194 (1 HSPs)
scaffold0194 (182-242)||(13042-13102)
[»] scaffold0126 (1 HSPs)
scaffold0126 (172-244)||(25341-25413)
[»] scaffold0063 (1 HSPs)
scaffold0063 (162-244)||(35383-35465)
[»] scaffold0070 (1 HSPs)
scaffold0070 (162-241)||(42517-42596)
[»] scaffold0118 (1 HSPs)
scaffold0118 (162-244)||(41627-41709)
[»] scaffold0004 (1 HSPs)
scaffold0004 (166-240)||(81562-81636)
[»] scaffold1367 (1 HSPs)
scaffold1367 (182-243)||(835-896)
[»] scaffold0238 (1 HSPs)
scaffold0238 (209-244)||(2705-2740)
[»] scaffold0122 (1 HSPs)
scaffold0122 (181-232)||(6925-6976)
[»] scaffold0172 (1 HSPs)
scaffold0172 (182-240)||(15775-15833)
[»] scaffold0517 (1 HSPs)
scaffold0517 (162-239)||(7725-7802)
[»] scaffold0032 (1 HSPs)
scaffold0032 (161-242)||(112281-112362)
[»] scaffold0047 (1 HSPs)
scaffold0047 (162-242)||(14968-15047)


Alignment Details
Target: chr6 (Bit Score: 168; Significance: 4e-90; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 21 - 241
Target Start/End: Complemental strand, 19638229 - 19638001
Alignment:
Q  21 acatcatcaaaaatcagaataataagaaaacttaagcaacacttttggttgaaaattgcaagttgcagcgacaacacaagacaaaaacatgtcaataccc 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19638229 acatcctcaaaaatcagaataataagaaaacttaagcaacacttttggttgaaaattgcaagttgcagcgacaacacaagacaaaaacatgtcaaaaccc 19638130  T
Q  121 caacaaaactattgccatgtgaaata--------ataactaagagaaacaacccacttgggttcgtccagtggtattggcttggaacctgggagggtgct 212  Q
    ||||||||||||||||||||||||||        ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||| |||||    
T  19638129 caacaaaactattgccatgtgaaataattttcacataactaagagaaacaacccacttgcgttggtccagtggtattggcgtggaacctgggagtgtgct 19638030  T
Q  213 cctcctcaaggtctcaggtttgattctct 241  Q
    ||  |||||||||||||||||||||||||    
T  19638029 ccagctcaaggtctcaggtttgattctct 19638001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 31623067 - 31622994
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttga 235  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||| |||||||||||||||    
T  31623067 aacccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtttga 31622994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 33549104 - 33549184
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| |||  ||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||    
T  33549104 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 33549184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 12188379 - 12188298
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||| | | |||||||||||||||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||    
T  12188379 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctct 12188298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 10338230 - 10338174
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    ||||||||||||||| |||| |||| ||||||||||||||||||||||||| |||||    
T  10338230 gtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgattc 10338174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 14278164 - 14278105
Alignment:
Q  185 gtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||| | ||||||||| | ||||||||| |||||||||||||||||||||||||    
T  14278164 gtattggctttggacctgggagtgcgctcctccttaaggtctcaggtttgattctctctg 14278105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 14557962 - 14558040
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| |||  ||||| ||||||||| |||||| || ||||||||||||  ||||||||||| |||||||    
T  14557962 aacccacttgggttggtctggtggtgttggcttgggacctggaagtgtgctcctcctccgggtctcaggttcgattctc 14558040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 20863395 - 20863456
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    ||||| ||||||||| || | |||| |||||||||||||||||||||| |||||||||||||    
T  20863395 gtggtgttggcttgggactttggagtgtgctcctcctcaaggtctcagatttgattctctct 20863456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 30127400 - 30127477
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattct 239  Q
    |||||||||||||| |||  |||||||||||||||   ||||||| ||||||||| || |||||||||||| ||||||    
T  30127400 aacccacttgggttggtctggtggtattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgattct 30127477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 6385882 - 6385942
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||| ||||| ||||||||  ||||||||||| ||||||||||||| |||||||||    
T  6385882 gtggtattgacttgggacctgggactgtgctcctccttaaggtctcaggttcgattctctc 6385942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 6776663 - 6776601
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||||||| | ||||| | |||||||||||| | |||||| |||||||||||||||    
T  6776663 gtggtattggcttgggatctgggggtgtgctcctcctcgatgtctcaagtttgattctctctg 6776601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 13661521 - 13661594
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgat 236  Q
    ||||||| |||||| ||| |||| ||||||||||  || |||||| |||||||||||| ||||||||||||||||    
T  13661521 aacccacatgggttggtctagtg-tattggcttgacacttgggagtgtgctcctcctcgaggtctcaggtttgat 13661594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 20213060 - 20213122
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    ||||||||  |||||| ||||||||| |||||||||||||| |||||||||| ||||| ||||    
T  20213060 agtggtatacgcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctct 20213122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 22107083 - 22107145
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    ||||||||  |||||| ||||||||| |||||||||||||| |||||||||| ||||| ||||    
T  22107083 agtggtatacgcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctct 22107145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 13330087 - 13330168
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    ||||||||||||||   | |||||||||| ||| |||| ||||||   |||||||||||||||||||| || ||||||||||    
T  13330087 aacccacttgggttgacctagtggtattgactttgaacttgggagtaagctcctcctcaaggtctcagattcgattctctct 13330168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 23910157 - 23910108
Alignment:
Q  192 cttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    ||||| ||||||||| ||||||||||||||||||||||||| || |||||    
T  23910157 cttgggacctgggagtgtgctcctcctcaaggtctcaggttcgaatctct 23910108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 12234563 - 12234503
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||| ||||| ||||||||| |||||||  ||| |||||||||||| |||||||||    
T  12234563 gtggtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctc 12234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 28363956 - 28364019
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||| |||| | ||| ||| |||||||||||||||||||||| || |||| ||||||    
T  28363956 agtggtattggtttgggatctgcgagtgtgctcctcctcaaggtctcagattcgattatctctg 28364019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 4105075 - 4105133
Alignment:
Q  186 tattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||| ||||| |||| ||||||||||| ||| ||||||||| |||| ||||||    
T  4105075 tattggcttgaaacctaggagtgtgctcctccttaagatctcaggttcgattttctctg 4105133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 242
Target Start/End: Complemental strand, 10650069 - 10650035
Alignment:
Q  208 gtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||| |||||||||||||||||||||||||    
T  10650069 gtgctcctcttcaaggtctcaggtttgattctctc 10650035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 21418490 - 21418548
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||||| || |||||| |||||||||||| | |||||| ||| |||||||    
T  21418490 gtggtattggcttgggacttgggagtgtgctcctcctccatgtctcaagttcgattctc 21418548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 34444823 - 34444881
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||| ||||| ||||  ||| |||||||||| |||||||||||||| |||||||    
T  34444823 gtggtattgacttgggaccttagagtgtgctcctccccaaggtctcaggttcgattctc 34444881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 3779358 - 3779406
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcag 229  Q
    |||||||||||||||  || |||||| |||||||| |||||||||||||    
T  3779358 agtggtattggcttgagacttgggagtgtgctccttctcaaggtctcag 3779406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 13441053 - 13441101
Alignment:
Q  165 ccacttgggttcgtccagtggtattggcttggaacctgggagggtgctc 213  Q
    ||||||||||| |||  ||||||||||||||| ||||||||| ||||||    
T  13441053 ccacttgggttggtcgggtggtattggcttgggacctgggagtgtgctc 13441101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 14200023 - 14199947
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    |||||| |||||||  || || ||||| ||||||  || |||||| |||||||||||||||||||||| || |||||    
T  14200023 aacccatttgggttgctctagaggtataggcttgagacttgggagtgtgctcctcctcaaggtctcagattcgattc 14199947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 21836769 - 21836829
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    |||||||||||||||||  ||| ||  ||| ||||||| ||||| ||||||||||||||||    
T  21836769 agtggtattggcttggactctgagattgtgttcctccttaaggtttcaggtttgattctct 21836829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 28841434 - 28841494
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||| ||||||||  |||  |||| ||||||||||||||||||||| ||| |||||||||    
T  28841434 gtggttttggcttgagaccaaggagtgtgctcctcctcaaggtctcaagttcgattctctc 28841494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 34984806 - 34984888
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  34984806 aacccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctg 34984888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 14285161 - 14285243
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | ||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  14285161 aacccacttgggttggccgagtggaattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 14285243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 25627057 - 25627139
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  25627057 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 25627139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 7918545 - 7918463
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | |||||||||||||||||||||||||| |  |||||||||||||||| ||||| |||||||||||    
T  7918545 aacccacttgggttggcctagtggtattggcttggaacctgggagtgcactcctcctcaaggtcttaggttcgattctctctg 7918463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 30883274 - 30883208
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctca 228  Q
    |||||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  30883274 aacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctca 30883208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 87499 - 87423
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    ||||||||| |||| | | |||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  87499 aacccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggtctcaggtttgattc 87423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 16773807 - 16773889
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||| ||| |||  ||||||||| ||||| ||||||||| |||||||||||| |||||||||||| |||||||||||    
T  16773807 aacccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 16773889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 21549214 - 21549132
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    ||||||||||||||| | | |||||||||||||||| ||||||||| ||||||||||| || |||||| ||| |||| |||||    
T  21549214 caacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctct 21549132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 22737082 - 22737164
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| ||| |||||||||||||||| || ||| || |||||||||| ||| |||||||||| ||||| |||||    
T  22737082 aacccacttgggttggtctagtggtattggcttgggacttggaagtgtgctcctccccaatgtctcaggttcgattccctctg 22737164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 29075781 - 29075863
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | |||||||||||||||| | ||||||| |||||||||||| || ||||| ||| |||||||||||    
T  29075781 aacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctg 29075863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 17028340 - 17028259
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    ||||||||||||||   | ||| ||||||| |||| || |||||| ||||||||||||||||||||||||||||||| ||||    
T  17028340 aacccacttgggttgacctagttgtattgggttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctct 17028259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 14495881 - 14495801
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||| ||||||| |||  ||||||||| ||||| | ||||||| |||||||||||| ||||||||| ||||||||||||    
T  14495881 aacccatttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctc 14495801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 29692462 - 29692382
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||| ||||||| |||  |||||||||| |||| | ||||||| |||||||||||||| ||||||||||| ||||||||    
T  29692462 aacccatttgggttggtctggtggtattggattgggatctgggagtgtgctcctcctcaaagtctcaggtttaattctctc 29692382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 43442215 - 43442278
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||| |||  | ||||||| ||||||||||||||||||||||||| |||||||||||    
T  43442215 agtggtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 43442278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 17155843 - 17155906
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctgct 246  Q
    ||||||||||| |||| ||||| |||  ||||||||||||||||||||||||||||||||| ||||    
T  17155843 agtggtattggtttgggacctgagag--tgctcctcctcaaggtctcaggtttgattctctgtgct 17155906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 25979194 - 25979251
Alignment:
Q  186 tattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||  |||||| || |||||||||||||||||||||| ||||||||||    
T  25979194 tattggcttggaatttgggagtgttctcctcctcaaggtctcaggttcgattctctct 25979251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 26078127 - 26078046
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||| | | ||||||||||| |||| || ||||||  |||| ||| ||||||||||||||| ||||||||||    
T  26078127 aacccacttgggttggcctagtggtattggtttgggacttgggagtatgcttctcttcaaggtctcaggttcgattctctct 26078046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 8278351 - 8278271
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| |||   |||||||||||||| || |||||| |||||||||||| || ||||| |||||||| ||||    
T  8278351 aacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagtttgattatctc 8278271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 18596075 - 18595995
Alignment:
Q  164 cccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||| ||  || |||||||||||||||  ||||||||  ||||||||||||||||||| ||||| |||| ||||||    
T  18596075 cccacttggattgatctagtggtattggcttgtgacctgggaatgtgctcctcctcaaggtcttaggttcgattttctctg 18595995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 37258423 - 37258360
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||| |||||| | || |||| ||||||||||||||||| ||||||| |||||||||||    
T  37258423 agtggtattagcttgggatctaggagtgtgctcctcctcaaggtttcaggttcgattctctctg 37258360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 892550 - 892480
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    |||||| ||||||| | | |||||||||||||||| ||||  ||| || ||||||||||||||||||||||    
T  892550 aacccatttgggttggcctagtggtattggcttgggacctcagagtgtactcctcctcaaggtctcaggtt 892480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 16457830 - 16457876
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctca 228  Q
    ||||||||||||||| |||| |||| |||||||||||||||||||||    
T  16457830 gtggtattggcttgggaccttggagtgtgctcctcctcaaggtctca 16457876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 21589288 - 21589370
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | |  ||||||||||||||| |||||||||  |||| |||||| | |||||||||| ||||| |||||    
T  21589288 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctactcctcgatgtctcaggttcgattccctctg 21589370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 30109364 - 30109308
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    ||||||||||||||  ||||||||| |||||||||||  |||||||||||| |||||    
T  30109364 gtggtattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcgattc 30109308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 84851 - 84902
Alignment:
Q  189 tggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||| | ||||||| ||||||||||||||||||||| ||| |||||||    
T  84851 tggcttgggatctgggagtgtgctcctcctcaaggtctcaagttcgattctc 84902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 4793141 - 4793094
Alignment:
Q  185 gtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    ||||||| |||| ||||||||| |||||||||||| ||||||||||||    
T  4793141 gtattggtttgggacctgggagtgtgctcctcctcgaggtctcaggtt 4793094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 16436622 - 16436692
Alignment:
Q  166 cacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgatt 237  Q
    |||||||||| | | |||||||||||||||| || ||| || ||||||||||||||||||||| ||| ||||    
T  16436622 cacttgggttggcctagtggtattggcttgggacttgg-agtgtgctcctcctcaaggtctcatgttcgatt 16436692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 37148045 - 37148100
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgat 236  Q
    |||||||||| | ||  ||||| ||| |||||||||||||||||||||||||||||    
T  37148045 agtggtattgacctgagacctgtgagtgtgctcctcctcaaggtctcaggtttgat 37148100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 19043458 - 19043528
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    |||||||||||||| | | |||| ||||| |||||||| |||||| ||| |||| ||||| ||||||||||    
T  19043458 aacccacttgggttggcctagtgctattgacttggaacttgggagtgtgttccttctcaaagtctcaggtt 19043528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 5390927 - 5390853
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgatt 237  Q
    ||||||| ||||||| | | ||||||||||||||||  | ||||||  ||||||||||| |||||||||||| ||||    
T  5390927 caacccatttgggttggcctagtggtattggcttggggcttgggag--tgctcctcctcgaggtctcaggttcgatt 5390853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 6844729 - 6844810
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||| | |  ||||||||| |||||||  |||||| ||| |||||||| |||||| ||||| |||| |||||    
T  6844729 aacccacttgggttggccaggtggtattgacttggaatttgggagtgtgttcctcctcgaggtctaaggttcgattatctct 6844810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 27093437 - 27093355
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  27093437 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctctg 27093355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 37788541 - 37788460
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||| | |||||||||||| |||||||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  37788541 aacccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcctcctcaaggtctcaggttcgattctctct 37788460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 16354969 - 16354886
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||||||| | | |||||||||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||||||    
T  16354969 caacccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgattctctctg 16354886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 53412948 - 53413027
Alignment:
Q  165 ccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||| ||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||    
T  53412948 ccacttgggttggtctagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaattctctctg 53413027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 28703480 - 28703398
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| |||||||| |||| |||||| | ||||||| ||||||||| ||||||||||||||| |||||||||||    
T  28703480 aacccacttgggttggtccagtgatattagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctg 28703398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 46518628 - 46518710
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| |   |||||||||||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||    
T  46518628 aacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctg 46518710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 14186648 - 14186727
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| | | |||||||||| ||||| |||||| || ||||||||||||||||||||||||| |||||||||    
T  14186648 aacccacttgggttggcctagtggtattgtcttgggacctgg-agtgtgctcctcctcaaggtctcaggttcgattctctc 14186727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 10445216 - 10445133
Alignment:
Q  162 aacccacttgggttcgtccagtggta-ttggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | ||||| | ||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||||    
T  10445216 aacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 10445133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 30311306 - 30311385
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    ||||||| |||||| | | |||||||| ||||||| | ||||||| ||||||||||||||||||||||||| ||||||||    
T  30311306 aacccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctct 30311385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 4222141 - 4222223
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| |   |||||||||||||||| | ||||||| |||||||||||||| |||| ||||| |||||||||||    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctg 4222223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 27259185 - 27259243
Alignment:
Q  186 tattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||| ||||||||| |||||||||||| |||| |||||||||||||||||||    
T  27259185 tattggcttgggacctgggagtgtgctcctcctcgaggtttcaggtttgattctctctg 27259243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 32651495 - 32651433
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||||| ||||||||| ||||||||||||||| |||||| || ||||||||||    
T  32651495 agtggtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctct 32651433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 36720381 - 36720462
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||| |||  ||||||||||||||| |  |||||| |||||||||||| |||| ||||||| ||||||||||    
T  36720381 aacccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctct 36720462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 31520681 - 31520601
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| | |  |||| |||||||||| | ||||||| |||||||||||| |||||| |||||||||||||||    
T  31520681 aacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctc 31520601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 47810820 - 47810740
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| |||  ||||||||||||| |  | |||||| |||||||||| ||||||||| ||||||||||||||    
T  47810820 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcgggtttgattctctc 47810740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 8170672 - 8170747
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgatt 237  Q
    |||||| ||||||| | | ||||||||||||||| ||| |||||| |||||||| |||||||||||||||| ||||    
T  8170672 aacccatttgggttggcctagtggtattggcttgaaacttgggagtgtgctcctactcaaggtctcaggttcgatt 8170747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 31789047 - 31788964
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||||||| | | |||| ||||||||||| | ||||||| |||||||||||| |||| | |||||||||| ||||||    
T  31789047 caacccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctcgaggttttaggtttgattatctctg 31788964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 54990703 - 54990780
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| ||  |||| | ||||||||| |||| |||| ||||||||||||||||||||||||| |||||||    
T  54990703 aacccacttgggtt-gtttagtgttgttggcttgggaccttggagcgtgctcctcctcaaggtctcaggttcgattctc 54990780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 34062626 - 34062542
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctc--ctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | |||||| |||||||||| ||  |||||| ||||||  |||||||||||||||||||  ||||||||||    
T  34062626 aacccacttgggttggcccagtgatattggcttgaaatttgggagtgtgctctcctcctcaaggtctcaggttcaattctctctg 34062542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 47454692 - 47454615
Alignment:
Q  163 acccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||  || |||||||||||||||  | || |||| |||||||||||| |||||||||||| |||||||    
T  47454692 acccacttgggttgttctagtggtattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 47454615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 21960571 - 21960631
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||||||||| ||||| ||| |||||||||||| ||||||||| || |||||||||    
T  21960571 gtggtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgattctctc 21960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 8368856 - 8368797
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||| |||| ||||||| || |||||| ||||| ||||||||||||||||||||    
T  8368856 agtggtattgacttgaaacctggtagtgtgctcatcctcgaggtctcaggtttgattctc 8368797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 240
Target Start/End: Complemental strand, 17108935 - 17108896
Alignment:
Q  201 tgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  17108935 tgggagtgtgctcctcctcaaggtctcaggtttgattctc 17108896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 51903933 - 51903874
Alignment:
Q  183 tggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| | ||||||| ||||||||||||  ||||||||||| |||||||||    
T  51903933 tggtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctc 51903874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 8075184 - 8075122
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||| ||||||| || |||||| ||||||||||||||||| ||||||| ||||| ||||    
T  8075184 agtggtataggcttgggacttgggagtgtgctcctcctcaaggtttcaggttcgattccctct 8075122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 14339630 - 14339688
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||||| |  |||||| |||||||||||||| |||||||||| |||||||    
T  14339630 gtggtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctc 14339688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 15048137 - 15048055
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| |   | |||||| ||||||| | ||||||  ||||||||||||||||||||||||| |||| ||||||    
T  15048137 aacccacttgggttggcttaatggtataggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctctg 15048055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 17554791 - 17554841
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    ||||||||||||||| ||||||||| |||||| ||||||||| ||||||||    
T  17554791 gtggtattggcttgggacctgggagtgtgctcttcctcaagggctcaggtt 17554841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 49494218 - 49494144
Alignment:
Q  166 cacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||| | | |||||||||| |||| ||  |||||| |||||| ||||| ||||||||||||||||||||    
T  49494218 cacttgggttagcctagtggtattgacttgaaatttgggagtgtgctcttcctcgaggtctcaggtttgattctc 49494144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 2667882 - 2667943
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    ||||||||||||||| | ||||||| |||||| ||||| |||||||||||| |||| |||||    
T  2667882 gtggtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctct 2667943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 4844580 - 4844507
Alignment:
Q  169 ttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||| |||  ||||||||| ||||| | ||||||| |||||||||||| |||||||||| | |||||||||    
T  4844580 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctc 4844507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 4870276 - 4870203
Alignment:
Q  169 ttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||| |||  ||||||||| ||||| | ||||||| |||||||||||| |||||||||| | |||||||||    
T  4870276 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctc 4870203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 44069778 - 44069835
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattct 239  Q
    ||||| ||||||||  | || |||| ||||||||||||||||||||||||||||||||    
T  44069778 gtggtgttggcttgagatcttggagtgtgctcctcctcaaggtctcaggtttgattct 44069835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 7975437 - 7975489
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggttt 233  Q
    |||||||| ||||||| | ||||||| ||||||||||||||||||| ||||||    
T  7975437 agtggtataggcttgggatctgggagtgtgctcctcctcaaggtcttaggttt 7975489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 10499185 - 10499105
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| | |  ||||||||||||||| | |||||||  ||||| ||||  |||||||||||| |||||||||    
T  10499185 aacccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctc 10499105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 31608562 - 31608518
Alignment:
Q  200 ctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  31608562 ctgggagtgtgctcctcctcgaggtctcagatttgattctctctg 31608518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 39253735 - 39253779
Alignment:
Q  200 ctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||    
T  39253735 ctgggagtgtgctcctcttcaaggtctcaggttcgattctctctg 39253779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 51766896 - 51766975
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| ||||  |||||||| ||||| | ||||||| |||||| |||||||||| |||| || |||||||||    
T  51766896 aacccacttgggttagtccgatggtattgacttgg-atctgggagtgtgctcttcctcaaggtttcagattcgattctctc 51766975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 3427591 - 3427548
Alignment:
Q  200 ctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    ||||||| |||||||||||||||||||||| || ||||||||||    
T  3427591 ctgggagtgtgctcctcctcaaggtctcagattcgattctctct 3427548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 19154631 - 19154710
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    |||||| ||||||| | | ||| |||||||||||   |||| ||| ||||||||||| ||||||||||||| ||||||||    
T  19154631 aacccatttgggttggcctagttgtattggcttgaggcctgagagtgtgctcctcctaaaggtctcaggttcgattctct 19154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 3054994 - 3055064
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    |||||||||||||| | |  ||||| ||||||||| |||| |||| ||||| ||||||||| |||||||||    
T  3054994 aacccacttgggttggcctggtggtgttggcttgggaccttggagcgtgcttctcctcaagatctcaggtt 3055064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 19716217 - 19716275
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||| ||||||||| |||  |||| |||||||||||||||||||| |||| |||||||    
T  19716217 gtggtgttggcttgggaccatggagtgtgctcctcctcaaggtctctggttcgattctc 19716275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 26505437 - 26505355
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||| || |||||||||||| ||||||| |  ||| || ||||||||| ||||| ||| |||||  ||||||||||    
T  26505437 aacccacttggattggtccagtggtataggcttgggatatggaagtgtgctcctcttcaagatctgaggttgaattctctctg 26505355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 47237027 - 47236969
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||| |||| ||| ||||| ||||||||| ||||||||||| ||| |||||||    
T  47237027 gtggtattggtttgggacccgggagtgtgctcctcttcaaggtctcatgttcgattctc 47236969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 18316573 - 18316497
Alignment:
Q  163 acccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||| |||  |||||  |||||||| |||| |||| |||||||| |||||||||| ||||| |||||||    
T  18316573 acccacttgggttggtctggtggtgctggcttgggaccttggagtgtgctcct-ctcaaggtcttaggttcgattctc 18316497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 20501727 - 20501776
Alignment:
Q  193 ttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||| ||||| ||| ||||||||||| ||||||||||||| |||||||||    
T  20501727 ttgggacctgagagtgtgctcctccttaaggtctcaggttcgattctctc 20501776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 26871580 - 26871503
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattct 239  Q
    |||||||||||||| | |  ||||| ||||||||| |||| ||||  | ||||||||||| |||| ||||||||||||    
T  26871580 aacccacttgggttggcctggtggtgttggcttgggaccttggagttttctcctcctcaaagtctgaggtttgattct 26871503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 30510255 - 30510194
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||| |||||||| |||| ||||  ||||||| ||| |||||||||||| ||||||||||    
T  30510255 gtggtactggcttgggacctaggagtatgctccttctcgaggtctcaggttcgattctctct 30510194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 44743904 - 44743851
Alignment:
Q  189 tggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||| | ||||||| |||||||||||| |||||||||||| |||| ||||    
T  44743904 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctc 44743851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 8051214 - 8051290
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    |||||||||||||| | |  ||||||||||||||| |||||| ||  |||| |||||| |||||||| ||| |||||    
T  8051214 aacccacttgggttggcctggtggtattggcttgggacctggcagtatgcttctcctcgaggtctcaagttcgattc 8051290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 9832497 - 9832541
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggag 206  Q
    |||||||||||||| | || ||||||||||||||| |||||||||    
T  9832497 aacccacttgggttggcccggtggtattggcttgggacctgggag 9832541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 16900731 - 16900679
Alignment:
Q  188 ttggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||| |||| |||| ||||||||| ||||||||||| ||| |||||||    
T  16900731 ttggcttgggaccttggagtgtgctcctcgtcaaggtctcatgttcgattctc 16900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 26481947 - 26482007
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||| |||||||| ||||| ||| |||||||||||||| || | ||||| |||||||||    
T  26481947 gtggtaatggcttgggacctgagagtgtgctcctcctcaaagttttaggttcgattctctc 26482007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 27923099 - 27923043
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    ||||||||||||||| || ||| || |||||||||||||  |||||||||| |||||    
T  27923099 gtggtattggcttgggacatggaagtgtgctcctcctcatagtctcaggttcgattc 27923043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 32638965 - 32639025
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||||||||||| ||||||| ||| || || || |||||||||||| |||| ||||    
T  32638965 gtggtattggcttggaaactgggagtgtgttcatcttcgaggtctcaggttcgattttctc 32639025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 33899653 - 33899693
Alignment:
Q  201 tgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    |||||| |||||||||||| |||||||||||| ||||||||    
T  33899653 tgggagtgtgctcctcctctaggtctcaggttcgattctct 33899693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 36010776 - 36010824
Alignment:
Q  196 gaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||| |||||| |||||||||||||| |||||| ||| |||||||||||    
T  36010776 gaacatgggagtgtgctcctcctcaaagtctcaagttcgattctctctg 36010824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 40777054 - 40777093
Alignment:
Q  203 ggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  40777054 ggagtgtgctcctc-tcaaggtctcaggtttgattctctct 40777093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 42799821 - 42799754
Alignment:
Q  164 cccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    |||||||||||| | |  ||||| ||||||||| |||| |||| |||||||| ||||||||||||||||    
T  42799821 cccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggtt 42799754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 26459486 - 26459404
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | |||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 26459404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 43215184 - 43215265
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||| ||| |||||||||||||||| |||| |||| ||||||||||||||||||||||||| ||||||||||    
T  43215184 aacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctct 43215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 30442488 - 30442567
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    |||||||||||||| | |||||||||||||||||| |||||||||  |||||||||||||||||| ||||| ||||||||    
T  30442488 aacccacttgggttggcccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctgaggttcgattctct 30442567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 22760863 - 22760941
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| |||  ||||||||| ||||| ||||||||| ||||||||||||||||||||||||| |||||||    
T  22760863 aacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 22760941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 39631844 - 39631925
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||| | | |||||||||||||||| |||||||||   ||||||||||||||||||||||| ||||||||||    
T  39631844 aacccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctct 39631925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 17041088 - 17041008
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| ||| ||||| |||||||||| | |||| || ||||||||||||||||||||||||| |||||||||    
T  17041088 aacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctc 17041008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 20335908 - 20335829
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||||| ||| || ||||||||||||| || |||||| |||||||||||| |||||||||||| |||||||    
T  20335908 caacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctc 20335829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 2962460 - 2962541
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||| || ||| ||||||||||| |||||||||| ||| ||||||||||||||| ||||||||| |||||||||||    
T  2962460 aacccacttgg-ttggtctagtggtattggtttggaacctgtgagtgtgctcctcctcaagatctcaggttcgattctctctg 2962541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 18363696 - 18363777
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||| | | |||||||| ||||||  |  |||||| ||||||||||||||||||||||||||||||||||||    
T  18363696 aacccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgattctctct 18363777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 23552118 - 23552199
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||| | | |||| ||||| ||||| ||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  23552118 aacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctct 23552199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 17113795 - 17113877
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||| | | | ||| |||||||||| ||||||||||| ||||| ||||||||||||||| ||| |||||||||||    
T  17113795 aacccacttggggtggcctagttgtattggcttagaacctgggagtgtgcttctcctcaaggtctcaagttcgattctctctg 17113877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 25021411 - 25021345
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctca 228  Q
    |||||||||||||| | | |||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  25021411 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 42836077 - 42836008
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggt 231  Q
    |||||||||||||| | | |||||||||||||||| ||||||||| |||||| ||||||||| |||||||    
T  42836077 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcctcaaggcctcaggt 42836008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 14058273 - 14058333
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||| ||||||||||| ||| |||||| |||||||||||||||||| |||||||||    
T  14058273 gtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 14368301 - 14368361
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||| ||||||||||| ||| |||||| |||||||||||||||||| |||||||||    
T  14368301 gtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14368361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 7721388 - 7721451
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||| |||| ||||||||| || |||||||||||||||||| ||| |||||||||||    
T  7721388 agtggtattggtttgggacctgggagtgtactcctcctcaaggtctcatgttcgattctctctg 7721451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 21877827 - 21877886
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||||| ||| |||||||    
T  21877827 agtggtattgacttgggacctgggagggtgctcctccttaaggtctcacgttcgattctc 21877886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 33222389 - 33222452
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||| |||||| || || ||| |||||||||||||||||| |||||||||||    
T  33222389 agtggtattggcttgggacctggaagtgtactcatcctcaaggtctcaggttcgattctctctg 33222452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 5579290 - 5579232
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||| ||||||||| |||| |||| |||||||||||||||||||||||||||| ||||    
T  5579290 gtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggtttgactctc 5579232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 29385798 - 29385740
Alignment:
Q  183 tggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    |||| ||||||||| || | |||| ||||||||||||||||||||||||||||||||||    
T  29385798 tggtgttggcttgggactttggagtgtgctcctcctcaaggtctcaggtttgattctct 29385740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 30579335 - 30579417
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | |  ||||||||||||||  ||||||||| || | |||||||||||||||||||| |||| ||||||    
T  30579335 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctg 30579417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 33869521 - 33869439
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | ||| |||||||||||  |||||| || |||||||| ||||||||||| |||| |||||||||||    
T  33869521 aacccacttgggttggcctagtagtattggcttgagacctggaagtgtgctccttctcaaggtctctggttcgattctctctg 33869439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 43590927 - 43590985
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||||| || |||||| |||||||||||||| |||||||||| |||||||    
T  43590927 gtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctc 43590985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 5830679 - 5830598
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||| ||||||| |||||||| |||||| |||||||||||||| || |||||||||||| | ||| ||| |||| |||||    
T  5830679 aacccagttgggttggtccagtgatattggtttggaacctgggagtgtactcctcctcaagatttcaagttcgattatctct 5830598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 2446308 - 2446388
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| |||   |||||||||||||| || |||||| |||||||||||| || ||||| ||| |||||||||    
T  2446308 aacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctc 2446388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 5273666 - 5273586
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| | |  ||||| ||||||||| ||||  ||| ||||||||||||||||||| |||||||||| ||||    
T  5273666 aacccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggtttgattgtctc 5273586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 7744186 - 7744106
Alignment:
Q  164 cccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||| |||| | | |||||||| ||||| | | ||||||   ||||||||||||||||||||||||||||||||||||    
T  7744186 cccacttaggttggcctagtggtataggcttaggatctgggactatgctcctcctcaaggtctcaggtttgattctctctg 7744106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 23301679 - 23301599
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    ||||||||||||||| | |  ||||||||| ||||| || |||||| |||||||||||  |||||||| ||||||||||||    
T  23301679 caacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggtctcaagtttgattctct 23301599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 4566501 - 4566422
Alignment:
Q  165 ccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||| | | |||||||||| ||| | |||| |||| ||  |||| ||||||||||||||||||||||||||||    
T  4566501 ccacttgggttggcctagtggtattgacttcggaccttggagtgtattccttctcaaggtctcaggtttgattctctctg 4566422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 244
Target Start/End: Original strand, 21558151 - 21558210
Alignment:
Q  185 gtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||| ||||||||||  ||  ||||||||||||||||||||||||| |||||||||||    
T  21558151 gtattgacttggaacctaagaatgtgctcctcctcaaggtctcaggttcgattctctctg 21558210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 31706425 - 31706504
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    |||| |||| |||| ||||||||||||||| |||| ||||||||| |||||| || ||||||||| ||  ||||||||||    
T  31706425 aaccaacttaggttagtccagtggtattggtttgggacctgggagtgtgctcatcgtcaaggtcttagacttgattctct 31706504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 42711977 - 42712036
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||| |||||| || |||||| ||||||||||||||||||||| ||| |||||||    
T  42711977 agtggtattagcttggtacatgggagtgtgctcctcctcaaggtctcatgttcgattctc 42712036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 7801180 - 7801250
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    ||||||||||| || | |  ||||||||| ||||| ||||||||| ||||||||| |||||||||||||||    
T  7801180 aacccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctcttcaaggtctcaggtt 7801250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 9608686 - 9608624
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||| ||||||| | ||||||| || |||||||||||| ||||||||| ||||||||||    
T  9608686 agtggtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctct 9608624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 9836258 - 9836196
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||| ||||||| | ||||||| || |||||||||||| ||||||||| ||||||||||    
T  9836258 agtggtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctct 9836196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 15137553 - 15137635
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | |  |||||| || ||||| |  | |||| ||||||||||||||||||||||||| |||||||||||    
T  15137553 aacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctg 15137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 18056851 - 18056773
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| |||  ||||||||| |||||  | | |||| ||||||||||| ||||||||||||| |||||||    
T  18056851 aacccacttgggttagtctggtggtattgacttgggtcttcggagtgtgctcctcctgaaggtctcaggttcgattctc 18056773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 19553474 - 19553523
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| |||||    
T  19553474 gtggtattggcttgga-cctgggagtgtgctcctcctcaaggtcttaggtt 19553523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 25655304 - 25655222
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||| |||||| ||  |||||||||| ||||| | ||| ||| ||| ||||||||||||| ||||||| |||||||||||    
T  25655304 aacccacctgggttggtttagtggtattgacttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgattctctctg 25655222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 38851277 - 38851338
Alignment:
Q  183 tggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||| |||||| ||| ||| ||||| ||||||||||| ||| |||||||||||||||    
T  38851277 tggtattggtttggaatctgtgagtgtgcttctcctcaaggtttcatgtttgattctctctg 38851338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 39499795 - 39499718
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattct 239  Q
    |||||||||||||| | | |||||||||||||||| ||||| ||| ||| ||||| | ||||||||| ||| ||||||    
T  39499795 aacccacttgggttggcctagtggtattggcttgggacctgtgagtgtgttcctctttaaggtctcatgttcgattct 39499718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 244
Target Start/End: Complemental strand, 41519335 - 41519258
Alignment:
Q  167 acttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||| | | |||||||||| ||||| |  | |||| ||||||||||||||||||||||||| | |||||||||    
T  41519335 acttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctctctg 41519258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 15905727 - 15905672
Alignment:
Q  184 ggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||| ||||||||| |||||||||||  |||||||||||| |||||||    
T  15905727 ggtattggcttgggacctgggagtgtgctcctcct-taggtctcaggttcgattctc 15905672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 22932787 - 22932707
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| ||   ||||||||||||||| ||||||||| | |||| |  ||||| |||||||||||| ||||||    
T  22932787 aacccacttgggttggtatggtggtattggcttgggacctgggagtgcgctcttattcaagatctcaggtttgaatctctc 22932707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 31835191 - 31835267
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgatt 237  Q
    ||||||||||||||| | |  ||||| |||||||||   || |||| ||||||||||||||||||||||||| ||||    
T  31835191 caacccacttgggttggcctggtggtgttggcttgggtgcttggagtgtgctcctcctcaaggtctcaggttcgatt 31835267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 45709784 - 45709704
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||| ||||||| | | ||||||||| |||||| | ||| ||| |||||||||||| |||||||||||| |||| ||||    
T  45709784 aacccatttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctc 45709704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 5668626 - 5668567
Alignment:
Q  183 tggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| || ||| || |||||||||||| |||||||||| | |||||||||    
T  5668626 tggtattggcttgggacatggaagtgtgctcctcctcgaggtctcaggatcgattctctc 5668567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 244
Target Start/End: Original strand, 11700212 - 11700247
Alignment:
Q  209 tgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||||||||||| |||||||||||    
T  11700212 tgctcctcctcaaggtctcaggttcgattctctctg 11700247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 23735304 - 23735237
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctca 228  Q
    |||||||||||||||  || |||||||||||||| |||  |||||  |||||||||||||| ||||||    
T  23735304 caacccacttgggttgatctagtggtattggcttagaatttgggattgtgctcctcctcaaagtctca 23735237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 45559200 - 45559251
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctc 213  Q
    |||||||||||||| | | ||||||||||||||||||||| |||| ||||||    
T  45559200 aacccacttgggttggcctagtggtattggcttggaaccttggagtgtgctc 45559251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 45976996 - 45976937
Alignment:
Q  165 ccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggt 224  Q
    ||||||||||| | | |||||||||||||||  ||||||||| ||||||||||| |||||    
T  45976996 ccacttgggttggcctagtggtattggcttgtgacctgggagtgtgctcctccttaaggt 45976937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 48079668 - 48079723
Alignment:
Q  187 attggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||| ||||||| | ||| |||| ||| ||||||||||||||||||||||    
T  48079668 attggcttgggacctgggtgtgtggtcctgctcgaggtctcaggtttgattctctc 48079723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 48771958 - 48772013
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgatt 237  Q
    ||||||||||||||| | ||||||| |||||||||||  |||||||||||| ||||    
T  48771958 gtggtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgatt 48772013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 2882986 - 2883032
Alignment:
Q  198 acctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||| |||| |||||||||||||||||||||||||  ||||||||||    
T  2882986 accttggagtgtgctcctcctcaaggtctcaggttcaattctctctg 2883032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 3280541 - 3280495
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctca 228  Q
    ||||||||||||||| ||| | ||| |||||||||||||||||||||    
T  3280541 gtggtattggcttgggacccgagagtgtgctcctcctcaaggtctca 3280495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 11721016 - 11720958
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||||| ||||||||  ||||||||||| ||||| |||| || |||||||    
T  11721016 gtggtattggcttgggacctgggaatgtgctcctccttaaggtatcagattcgattctc 11720958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 25956368 - 25956299
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    |||||| ||||||| | | |||||||||||||||| |||| |||| |||||||| |||||||||| |||||    
T  25956368 aacccatttgggttggcctagtggtattggcttgggaccttggagtgtgctcct-ctcaaggtcttaggtt 25956299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 29785357 - 29785295
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||| ||||||| | |||| || ||||||||||||||||||||| ||| |||||| ||||    
T  29785357 gtggtataggcttgggatctggaagtgtgctcctcctcaaggtctcatgttcgattctttctg 29785295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 38374655 - 38374597
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||| ||||||||| ||||  ||| ||||||||||||||||||| ||||| |||||||    
T  38374655 gtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattctc 38374597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 48125250 - 48125181
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    |||||||||||||| |||  ||||| ||||||||| |||| |||| ||||||||||  |||||||||||||    
T  48125250 aacccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcctcc-gaaggtctcaggtt 48125181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 7499995 - 7499922
Alignment:
Q  167 acttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||| | | |||| ||||||||||| ||||| |||  |||||||| || |||||||||||| |||||||    
T  7499995 acttgggttagcctagtgatattggcttgggacctgagagtttgctcctcttcgaggtctcaggttcgattctc 7499922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 244
Target Start/End: Complemental strand, 13106809 - 13106776
Alignment:
Q  211 ctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||||||||| |||||||||||    
T  13106809 ctcctcctcaaggtctcaggttcgattctctctg 13106776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 9183229 - 9183185
Alignment:
Q  200 ctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||| |||||||||||||| |||||||||| |||| ||||||    
T  9183229 ctgggagtgtgctcctcctcaaagtctcaggttcgattatctctg 9183185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 28236636 - 28236592
Alignment:
Q  183 tggtattggcttggaacctgggagggtgctcctcctcaaggtctc 227  Q
    |||||||||||||| ||||||||| | |||||||||| |||||||    
T  28236636 tggtattggcttgggacctgggagtgcgctcctcctcgaggtctc 28236592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 29916838 - 29916806
Alignment:
Q  208 gtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||||||||||||||| |||||||    
T  29916838 gtgctcctcctcaaggtctcaggttcgattctc 29916806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 36803696 - 36803644
Alignment:
Q  169 ttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaa 221  Q
    ||||||| ||| |||||||||| ||||| |||||||||  |||||||||||||    
T  36803696 ttgggttggtctagtggtattgacttgggacctgggagtatgctcctcctcaa 36803644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 165 - 243
Target Start/End: Complemental strand, 7292871 - 7292793
Alignment:
Q  165 ccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    ||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctct 7292793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 37109427 - 37109345
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | |||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 37109345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 7949530 - 7949448
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||| | | | || ||||||||||||| |||| |||| ||||||||||||||||||||||||| |||||||||||    
T  7949530 aacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctg 7949448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 23377975 - 23378037
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||| ||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  23377975 agtgttattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctct 23378037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 31759734 - 31759652
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||||||  || |||||||||||||||| || |||||| |||||||||||||||||||||| || |||||| ||||    
T  31759734 aacccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgattctttctg 31759652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 16581712 - 16581763
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  16581712 agtggtattggcttggaacctgggagtctgctcctcctcaaggtctcaggtt 16581763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 37274536 - 37274453
Alignment:
Q  162 aacccacttgggttcgtccagtggta-ttggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | ||| ||| ||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  37274536 aacccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctg 37274453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 38869787 - 38869850
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||| | ||||||| ||||||||||||||||||||||||| ||||| |||||    
T  38869787 agtggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctg 38869850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 5795485 - 5795407
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| |||  ||||| ||| ||||| |||| ||||  ||||||||||||||||||||||||||||||||    
T  5795485 aacccacttgggttggtctggtggtgttgacttggcaccttggagtatgctcctcctcaaggtctcaggtttgattctc 5795407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 2185089 - 2185028
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||| |||||||||||||||||| |||||||| ||||| |||||||||| |||||||||    
T  2185089 agtggtaatggcttggaacctgggagtgtgctccttctcaaagtctcaggttcgattctctc 2185028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 49576950 - 49576890
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||||||| | || |||||| ||||||||||||||||||||||||| |||||||||    
T  49576950 gtggtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctc 49576890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 53496899 - 53496959
Alignment:
Q  184 ggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||| |||| ||||||||| |||||||||||||| ||||||| ||||||||||||||    
T  53496899 ggtattggtttgggacctgggagtgtgctcctcctcaaagtctcagatttgattctctctg 53496959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 2622477 - 2622389
Alignment:
Q  160 acaacccacttgggttcgtccagtggtatt----ggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||| | | |||||||||    ||||||| ||||||||| |||||||||||| | |||||||||| |||||||||||    
T  2622477 acaacccacttgggttggcctagtggtattaattggcttgggacctgggagtgtgctcctcctccatgtctcaggttcgattctctctg 2622389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 4249196 - 4249259
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||| ||||||| |  | |||| |||||||||||||||||||||||||||||||||||||    
T  4249196 agtggtataggcttgggattttggagtgtgctcctcctcaaggtctcaggtttgattctctctg 4249259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 39509069 - 39509148
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||||| |||   ||||| |||||||| | ||||||| |||||||||||| |||||||||||| |||||||    
T  39509069 caacccacttgggttggtctcatggtaatggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39509148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 55427277 - 55427198
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||||| | |  ||||||||||||||| |||||||||  ||||||| ||| |||||||||||| |||||||    
T  55427277 caacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctc 55427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 19238653 - 19238575
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| | |  ||||||||||||||| || |||||| |||||||||||| ||||||| |||| |||||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctc 19238575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 19680864 - 19680782
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||| || | | ||||||||| |||||| || |||||| |||||| |||||||||||| ||||| |||||||||||    
T  19680864 aacccacttggattggcctagtggtattcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttcgattctctctg 19680782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 24827825 - 24827895
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    ||||||||| |||| |||| ||||||||| ||||| ||||||||| | |||||||||| ||||||||||||    
T  24827825 aacccactttggttggtccggtggtattgacttgggacctgggagtgcgctcctcctcgaggtctcaggtt 24827895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 37720290 - 37720212
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| | |  ||| ||||||||||| ||||||||| |||| ||||||||||||| |||||| |||||||    
T  37720290 aacccacttgggttggcctggtgttattggcttgggacctgggagtgtgcccctcctcaaggtcccaggttcgattctc 37720212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 46545711 - 46545793
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | |||||||||||||||  ||||| ||| ||||||||||||||| |||||| || |||| ||||||    
T  46545711 aacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattcgattttctctg 46545793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 47202473 - 47202433
Alignment:
Q  188 ttggcttggaacctgggagggtgctcctcctcaaggtctca 228  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  47202473 ttggcttggaacctgggagtgtgctcctcctcaaggtctca 47202433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 1730565 - 1730483
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||||||   | |||||||||||||||| ||||| ||| ||||||||| |||| ||||||| ||  ||||||||||    
T  1730565 aacccacttgggttgacctagtggtattggcttgggacctgagagtgtgctcctcttcaaagtctcagattctattctctctg 1730483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 8030261 - 8030199
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||| ||||||| || |||||| ||||||||||||||||||||| ||| ||||| ||||    
T  8030261 agtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattccctct 8030199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 8325455 - 8325377
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| | || ||||| ||||||||  |||| |||| |||||| |||||||||||| ||||| |||||||    
T  8325455 aacccacttgggttgggccggtggtgttggcttgagaccttggagtgtgctcatcctcaaggtcttaggttcgattctc 8325377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 46295097 - 46295175
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||| |||| |||  || || ||||||||| || | |||| ||||||||||||||||||||||||| |||||||    
T  46295097 aacccacttaggttggtctggtagtgttggcttgggacattggagtgtgctcctcctcaaggtctcaggttcgattctc 46295175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 5450117 - 5450170
Alignment:
Q  186 tattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattct 239  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||| || ||||||    
T  5450117 tattggcttggaatctgggagtgtgctcctcctcaaggtttcagattcgattct 5450170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 13015446 - 13015507
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||||| || |||||| |||||||||||| | |||||| ||| |||||||||    
T  13015446 agtggtattggcttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctc 13015507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 24234649 - 24234725
Alignment:
Q  166 cacttgggttcgtccag-tggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||| |||||| |||||||||||||| || |||||| |||||| |||| ||||||||| ||| |||||||||    
T  24234649 cacttgggtt-gtccaggtggtattggcttgggacttgggagtgtgctcatcctgaaggtctcaagttcgattctctc 24234725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 33632191 - 33632130
Alignment:
Q  183 tggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||||||||  ||||||  ||||||||||||||||| |||| | |||||||||||    
T  33632191 tggtattggcttggaatatgggagtatgctcctcctcaaggtcccaggatcgattctctctg 33632130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 46329192 - 46329241
Alignment:
Q  190 ggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattct 239  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||| ||||||    
T  46329192 ggcttgggacctgggagtgtgctcctcctcaaggtatcaggttcgattct 46329241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 15180741 - 15180820
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||| | || ||| |||||||||||||||| ||||||||| |   | ||||||||||||| ||||| |||||||||||    
T  15180741 aacccacttagattggtctagtggtattggcttgggacctgggagtg---tactcctcaaggtcttaggttcgattctctctg 15180820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 32992638 - 32992690
Alignment:
Q  188 ttggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||| |||| |||| ||||||||||||||||||||| ||| |||||||    
T  32992638 ttggcttgggaccttggagtgtgctcctcctcaaggtctcaagttcgattctc 32992690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 40284041 - 40283985
Alignment:
Q  183 tggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattct 239  Q
    |||||||||||||| || |||||| ||||  ||||||||||||| ||||||||||||    
T  40284041 tggtattggcttgggacttgggagtgtgcatctcctcaaggtctaaggtttgattct 40283985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 42281311 - 42281236
Alignment:
Q  160 acaacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgat 236  Q
    |||||||||||||||| | |  ||||| ||||||||| |||| | || |||||||| ||||||||||||||||||||    
T  42281311 acaacccacttgggttggccaggtggtgttggcttgggaccttgtagtgtgctcct-ctcaaggtctcaggtttgat 42281236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 51250598 - 51250522
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    |||||||||||||| | |  ||||||||||||||| | ||||||| ||||||| ||||||| ||||| ||| |||||    
T  51250598 aacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattc 51250522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 10047999 - 10048062
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||| ||||  |||  ||||||| |||| ||||||||||| |||||||||||    
T  10047999 agtggtattggcttgggacctaagagtatgctccttctcatggtctcaggttcgattctctctg 10048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 20281265 - 20281198
Alignment:
Q  165 ccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    ||||||||||| |||| ||||||||| ||||| |  || ||| |||||||||||||||||| ||||||    
T  20281265 ccacttgggttggtccggtggtattgacttgggaattgagagcgtgctcctcctcaaggtcccaggtt 20281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 244
Target Start/End: Complemental strand, 21404850 - 21404815
Alignment:
Q  209 tgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||||||| |||||||||||||||    
T  21404850 tgctcctcctcaaggtctcatgtttgattctctctg 21404815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 30938276 - 30938217
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||| |||| | || |||| |||||||||||| |||||||||||| |||||||    
T  30938276 agtggtattggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 30938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 244
Target Start/End: Complemental strand, 44195053 - 44194978
Alignment:
Q  169 ttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||| ||||||||||||||| |||||| |||| || ||| | || |||||||||||| |||  ||||||||||    
T  44195053 ttgggttggtccagtggtattggtttggaatctggaagtgtgtttcttctcaaggtctcatgttcaattctctctg 44194978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 11592209 - 11592147
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||| ||||| ||||| ||| |||||||||||| |||||| ||||| |||| ||||||    
T  11592209 gtggtattgccttgggacctgagagtgtgctcctcctccaggtcttaggttcgattatctctg 11592147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 13901746 - 13901808
Alignment:
Q  166 cacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctca 228  Q
    |||||||||| ||| |||||||||||||||  ||||||||| ||| |||||||  ||||||||    
T  13901746 cacttgggttggtctagtggtattggcttgagacctgggagtgtgttcctccttgaggtctca 13901808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 17618301 - 17618347
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctca 228  Q
    ||||||||||||||  ||||||||| |||||||||||| ||||||||    
T  17618301 gtggtattggcttgagacctgggagtgtgctcctcctcgaggtctca 17618347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 33438551 - 33438513
Alignment:
Q  165 ccacttgggttcgtccagtggtattggcttggaacctgg 203  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  33438551 ccacttgggttggtctagtggtattggcttggaacctgg 33438513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 51622521 - 51622567
Alignment:
Q  198 acctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||| |||| ||||||||||||||||||||||||| || ||||||||    
T  51622521 accttggagtgtgctcctcctcaaggtctcaggttcgactctctctg 51622567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 12798684 - 12798765
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    ||||||||||||||   | ||||||||||| |||  | ||||||| ||||| |||||| |||| ||||||| ||||||||||    
T  12798684 aacccacttgggttgaccgagtggtattggtttgagatctgggagtgtgctgctcctcgaggtttcaggttcgattctctct 12798765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 19532057 - 19531996
Alignment:
Q  183 tggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| || | |||| ||||||||||| ||| | ||||||| |||||||||||    
T  19532057 tggtattggcttgggacataggagcgtgctcctccttaagttttcaggttcgattctctctg 19531996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 29195095 - 29195175
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||| | |  ||||| ||||||||| |||| |||| |||||||| ||||||||| || ||| ||||||||||    
T  29195095 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcct-ctcaaggtcgcaagttcgattctctct 29195175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 8714698 - 8714758
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    ||||||||||| |||| | ||| ||| ||| ||||||||||||| |||| |||||||||||    
T  8714698 agtggtattggtttgggatctgagagcgtgttcctcctcaaggtttcagatttgattctct 8714758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 31826609 - 31826685
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    ||||||||||||||   | |||||||| ||||||| |  || ||| ||||||||||||||||||||| ||| |||||    
T  31826609 aacccacttgggttgccctagtggtataggcttgggatttgcgagtgtgctcctcctcaaggtctcaagttcgattc 31826685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 37980197 - 37980146
Alignment:
Q  188 ttggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||| |||| |||| ||||||||| ||||||||||||||| |||||||    
T  37980197 ttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcgattctc 37980146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 38206174 - 38206127
Alignment:
Q  189 tggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgatt 237  Q
    |||||||| |||| |||| ||||||||| ||||||||||||||||||||    
T  38206174 tggcttgggaccttggagtgtgctcctc-tcaaggtctcaggtttgatt 38206127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 41683752 - 41683808
Alignment:
Q  165 ccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaa 221  Q
    |||||||||||   | |||||||||||||||||||||| ||| |||||||| |||||    
T  41683752 ccacttgggttgacctagtggtattggcttggaacctgagagtgtgctccttctcaa 41683808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 51954134 - 51954194
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||| |||| ||||| || ||||||  ||||||||||| ||||||||||||||||| ||||    
T  51954134 gtggcattgacttgggacttgggagtatgctcctcctcgaggtctcaggtttgattatctc 51954194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 52880164 - 52880224
Alignment:
Q  184 ggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||| |||||| ||| | ||||| ||||||||||| | || ||||||||||||||    
T  52880164 ggtattggctaggaacccgggggtgtgcttctcctcaaggttttagatttgattctctctg 52880224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 56409977 - 56410028
Alignment:
Q  188 ttggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||| |||| |||| ||||||||| ||||||||||||||| |||||||    
T  56409977 ttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcgattctc 56410028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 36371470 - 36371552
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  36371470 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctctg 36371552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 33700847 - 33700767
Alignment:
Q  164 cccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||| | | |||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||    
T  33700847 cccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 33700767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 4566548 - 4566630
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | |||| ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  4566548 aacccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctctg 4566630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 10526823 - 10526905
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||| ||||||| |||||||||||||||||||| |||||||||  ||||||||||||||||||||| || |||||||||||    
T  10526823 aacccatttgggttggtccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctg 10526905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 9165271 - 9165189
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | |||||||||||||||| ||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  9165271 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctg 9165189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 51703779 - 51703861
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||| ||||||| ||| |||||||||||||||||| ||||||| |||||||||||||| || ||||||| |||||||||||    
T  51703779 aacccatttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctctg 51703861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 15786393 - 15786317
Alignment:
Q  165 ccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    ||||||||||| ||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||| ||||||||    
T  15786393 ccacttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctct 15786317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 21547556 - 21547474
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||| ||||||||| | | |||||||||||||||| || ||||||||||||||||||| |||| ||||||| |||||||||||    
T  21547556 aaccgacttgggttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctg 21547474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 8177239 - 8177176
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||| | ||||||| ||||||||||||||||| ||||||| |||||||||||    
T  8177239 agtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 8177176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 19940951 - 19940868
Alignment:
Q  159 aacaacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||||||||||| |||  ||||| || ||||||  ||| |||| ||||||||||| |||||||||||||||||||||||    
T  19940951 aacaacccacttgggttggtctggtggtgttagcttgggtccttggagtgtgctcctccttaaggtctcaggtttgattctctc 19940868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 3265948 - 3266006
Alignment:
Q  186 tattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||| |||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  3265948 tattgacttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 3266006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 952509 - 952589
Alignment:
Q  160 acaacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||| ||| |||  ||||| ||||||||| ||||||||| |||||| ||||||| |||||||||| |||||||    
T  952509 acaacccacttgagttggtctggtggtgttggcttgggacctgggagtgtgctcatcctcaaagtctcaggttagattctc 952589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 2219972 - 2220052
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||||||||  ||  |||||||||||||||||||||  || ||||| |||||| |||||||||||| |||||||||    
T  2219972 aacccacttgggttgttctggtggtattggcttggaacctgaaagtgtgcttctcctcgaggtctcaggttcgattctctc 2220052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 19528409 - 19528325
Alignment:
Q  156 agaaacaacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||| ||||||||||||||| | |  ||||||||||||||| | ||  ||| ||||||||||||||||||||||||| |||||||    
T  19528409 agaatcaacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattctc 19528325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 31794340 - 31794276
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtct 226  Q
    |||||||||||||| | | |||||||||||||||| || |||||| |||||||||||||||||||    
T  31794340 aacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtct 31794276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 37046985 - 37047060
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    |||||||||||||| |||  ||||| ||||||||| |||| |||| |||||||| ||||||||||||||||||||||    
T  37046985 aacccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggtttgattc 37047060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 2799881 - 2799944
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||| ||||||  | ||||||| ||||||||||||||||||||||||| |||||||||||    
T  2799881 agtggtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 2799944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 16170055 - 16169976
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||||| | |  ||||||||| ||||| ||||||||| ||| ||||||||||||| ||||||| |||||||    
T  16170055 caacccacttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggtttcaggttcgattctc 16169976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 4824975 - 4825049
Alignment:
Q  166 cacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||| |||   |||| ||||||||| |||| |||| ||||||||| |||||||||||||||||||||||    
T  4824975 cacttgggttggtctgatggtgttggcttgggaccttggagtgtgctcctcttcaaggtctcaggtttgattctc 4825049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 6122813 - 6122875
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||| ||||||| || |||||| ||||||||||||||||||||||||| ||||| ||||    
T  6122813 agtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctct 6122875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 17745328 - 17745250
Alignment:
Q  166 cacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||| | | |||||||||||||||| ||||| | | |||||||||||| |||||||| ||| |||||||||||    
T  17745328 cacttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctg 17745250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 21268069 - 21267987
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||| ||| | | ||| |||||||||||| || |||||| |||||||||||| ||||||  ||||||||||||||||    
T  21268069 aacccacttgagttgggctagtagtattggcttgggacttgggagtgtgctcctcctctaggtcttgggtttgattctctctg 21267987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 25297772 - 25297850
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| ||| |||||||||| ||| | | ||| ||| |||||||||||| |||||| |||||||||||||    
T  25297772 aacccacttgggttggtctagtggtattgacttaggatctgagagtgtgctcctcctcgaggtctgaggtttgattctc 25297850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 11063556 - 11063637
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||| |||||||  || |||||||||||||||| |||||  || ||| ||||||||||||||| ||||| ||||||||||    
T  11063556 aacccatttgggttgatctagtggtattggcttgggacctgaaagtgtgttcctcctcaaggtcttaggttcgattctctct 11063637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 242
Target Start/End: Complemental strand, 18459307 - 18459227
Alignment:
Q  163 acccacttgggttcgtccagtggta-ttggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||||||| ||| ||||||| ||||||||| || |||||| |||||||||||  |||||| || ||||||||||||    
T  18459307 acccacttgggttggtctagtggtaattggcttgggacttgggagtgtgctcctccttgaggtcttagatttgattctctc 18459227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 31383859 - 31383795
Alignment:
Q  177 gtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    |||| ||||||||||||||| ||||||||| |||||||||||   ||||||||||| ||||||||    
T  31383859 gtccggtggtattggcttgggacctgggagtgtgctcctccttggggtctcaggttcgattctct 31383795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 44126396 - 44126476
Alignment:
Q  163 acccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    ||||||||||||| | |  ||||||||| | ||| ||||||||| |||||||||| | ||||||||| |||||||||||||    
T  44126396 acccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcctccacgaggtctcagatttgattctctct 44126476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 1247148 - 1247195
Alignment:
Q  197 aacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||| || |||||||||||||||||||||| |||||||||||    
T  1247148 aacctgggagtgtactcctcctcaaggtctcaggttcgattctctctg 1247195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 6650614 - 6650677
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||| | | |||||  ||||||||||||| |||||||||| |||||||||||    
T  6650614 agtggtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctctg 6650677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 12370192 - 12370243
Alignment:
Q  191 gcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||| ||||||||| |||||||||||| |||||||| |||||||||||||    
T  12370192 gcttgggacctgggagtgtgctcctcctcgaggtctcatgtttgattctctc 12370243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 29056377 - 29056460
Alignment:
Q  162 aacccacttgggttcgtccagtggta-ttggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| ||||||||||| |||| |||| ||||||||| |||||| |||| ||| | ||||||| |||| ||||||    
T  29056377 aacccacttgggttggtccagtggtatttggtttgggacctgggagtgtgctcatcctgaagttttcaggttcgattatctctg 29056460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 52336831 - 52336768
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||| | ||||||| ||||||||||| ||| ||||||||| |||| ||||||    
T  52336831 agtggtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgattatctctg 52336768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 8904414 - 8904496
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | ||| |||||| ||||| |  || ||| ||||||||||||||||||||| ||| |||||||||||    
T  8904414 aacccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctctg 8904496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 34228868 - 34228953
Alignment:
Q  156 agaaacaacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||| |||||||||| ||| |||  ||||| ||||||||| |||| |||| ||| ||||| ||||||||||||||| |||||||||    
T  34228868 agaaaaaacccacttgagttggtctggtggtgttggcttgggacctcggagtgtgttcctc-tcaaggtctcaggttggattctctc 34228953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 36428732 - 36428790
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||| ||||||||| |||| ||||  |||||||||||||||||||| |||||||||||    
T  36428732 gtggtgttggcttggtaccttggagtatgctcctcctcaaggtctcatgtttgattctc 36428790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 40257399 - 40257465
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctca 228  Q
    |||||||||||||| | |  ||||||||||||||  ||||||||| |||||||||||| ||||||||    
T  40257399 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctca 40257465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 208 - 242
Target Start/End: Original strand, 51281397 - 51281431
Alignment:
Q  208 gtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||||||||||||||||||||||||    
T  51281397 gtgctcctcctcaaggtctcaggtttgattctctc 51281431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 52116837 - 52116787
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    ||||||||||||||| || |||||| |||||||||||||| ||||||||||    
T  52116837 gtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggtt 52116787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 17297013 - 17297062
Alignment:
Q  191 gcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||| |||| |||| ||||||||||||||||||||| |||||||||||    
T  17297013 gcttgggaccttggagtgtgctcctcctcaaggtctcatgtttgattctc 17297062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 27476826 - 27476765
Alignment:
Q  183 tggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| || | |||| |||||||||||| || ||||| |||||||||||||||    
T  27476826 tggtattggcttgggacttaggagtgtgctcctcctcgagatctcaagtttgattctctctg 27476765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 27567198 - 27567117
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||| |||   || ||||| ||||||||||| ||| ||||||||| |||||||||||| || |||| |||||    
T  27567198 aacccacttgggttggtcggatgatattgacttggaacctgagagtgtgctcctcttcaaggtctcagattcgattttctct 27567117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 50901581 - 50901662
Alignment:
Q  162 aacccacttgggttcgtccagtggta-ttggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| | | ||||||| ||||||||| |||||| || |||||||||||| ||||||||  || |||||||||    
T  50901581 aacccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctctc 50901662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 41508831 - 41508907
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    |||||||||||||| | |  |||||| ||| |||| | ||||||| |||||||||||||||||||||| ||| ||||    
T  41508831 aacccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaaggtctcagatttaattc 41508907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 51814494 - 51814574
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| | |   |||||||| ||||  | ||| ||| ||||||||||||||||||||||||| |||||||||    
T  51814494 aacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctc 51814574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 24730387 - 24730458
Alignment:
Q  165 ccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgat 236  Q
    ||||||||||| | | |||||||||| ||||  | ||||||| ||||||||| |||||||| ||||||||||    
T  24730387 ccacttgggttggcctagtggtattgtcttgagatctgggagtgtgctcctcttcaaggtcccaggtttgat 24730458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 44046205 - 44046162
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggt 224  Q
    |||||||||||||||| | ||||||| |||||||||||||||||    
T  44046205 agtggtattggcttgggatctgggagtgtgctcctcctcaaggt 44046162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 50919973 - 50920036
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||| |||| |||||| ||| |||||| |||| ||||| ||||||| |||||||||||    
T  50919973 agtggtattgacttgaaacctgagagtgtgctcatccttaaggtttcaggttcgattctctctg 50920036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 17439955 - 17439997
Alignment:
Q  200 ctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||| |||||||||||| |||||||| |||||||||||||    
T  17439955 ctgggagtgtgctcctcctcgaggtctcatgtttgattctctc 17439997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 35562745 - 35562803
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||||| ||||| ||  |||||||||||| |||||| ||| |||||||||    
T  35562745 gtggtattggcttgggacctgagaatgtgctcctcctcgaggtctaaggattgattctc 35562803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 38947509 - 38947471
Alignment:
Q  201 tgggagggtgctcctcctcaaggtctcaggtttgattct 239  Q
    |||||| ||||||||||||||||||||||||| ||||||    
T  38947509 tgggagtgtgctcctcctcaaggtctcaggttcgattct 38947471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 52029993 - 52029935
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||| ||||  |||| |||| |||||||| |||||||||||||||| |||||||    
T  52029993 gtggtattgacttgagacctaggagtgtgctccttctcaaggtctcaggttcgattctc 52029935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 31605903 - 31605846
Alignment:
Q  183 tggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||| ||||||||| |||| | || ||||||||||||||||||||| ||| |||||||    
T  31605903 tggtgttggcttgggaccttgaagtgtgctcctcctcaaggtctcaagttcgattctc 31605846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 37400274 - 37400351
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattct 239  Q
    |||| ||||||||| |||  ||||||||||||||  |||||  || ||||||||||| ||||||||| ||| ||||||    
T  37400274 aaccaacttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattct 37400351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 43445984 - 43446041
Alignment:
Q  183 tggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||| |||||||||  ||| |||| ||||||||||||||||||||| ||| |||||||    
T  43445984 tggtgttggcttgggtccttggagtgtgctcctcctcaaggtctcatgttcgattctc 43446041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 1094525 - 1094605
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| ||    |||||||| ||||||||||| ||| |||||||||| | ||||||||  || |||||||||    
T  1094525 aacccacttgggttggtttgttggtattgacttggaacctgtgagtgtgctcctccacgaggtctcaaattcgattctctc 1094605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 9964462 - 9964518
Alignment:
Q  186 tattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||| ||||| | ||||||| |||||| ||||||| ||||||||||||||| ||||    
T  9964462 tattgacttgggatctgggagtgtgctcttcctcaatgtctcaggtttgattatctc 9964518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 12587294 - 12587350
Alignment:
Q  186 tattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||| ||||| | ||| ||| |||||||||||| |||||||||||| |||||||||    
T  12587294 tattgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctctc 12587350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 27430125 - 27430197
Alignment:
Q  168 cttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||| | |||||| |||||||||  |||  ||| ||| |||| |||||||||||||||| |||||||    
T  27430125 cttgggttcgcctagtggtgttggcttgggtccttagagcgtgttccttctcaaggtctcaggttcgattctc 27430197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 38939228 - 38939279
Alignment:
Q  188 ttggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||| |||| |||| ||||||||| |||||||||| ||||||||||||    
T  38939228 ttggcttgggaccttggagtgtgctcctc-tcaaggtctctggtttgattctc 38939279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 39012291 - 39012366
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    ||||||||| |||| | | |||||| ||||||||| |||| |||| |||||| || ||||||||| |||||||||||    
T  39012291 aacccactttggttggcctagtggtgttggcttgggaccttggagtgtgctcttc-tcaaggtcttaggtttgattc 39012366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 39964531 - 39964586
Alignment:
Q  188 ttggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||  |||| |||| ||||||||| ||||||||||||||||||||| |||||    
T  39964531 ttggcttgcgaccttggagtgtgctcctc-tcaaggtctcaggtttgattccctctg 39964586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 40810505 - 40810549
Alignment:
Q  200 ctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||| ||| ||||| ||||||||||||||| |||||||||||    
T  40810505 ctgggagtgtgttcctcttcaaggtctcaggttcgattctctctg 40810549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 42327471 - 42327392
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    |||||||||||||| | | |||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctct 42327392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 42922414 - 42922497
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctc-aaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | |||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  42922414 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctctg 42922497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 11062360 - 11062441
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||| | | |||| |||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||    
T  11062360 aacccacttgggttggcctagtgatattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtttgattctctct 11062441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 42602554 - 42602634
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| | | |||||||||||||||| ||||||||| |||||||| |||||||||| |||||||||||||||    
T  42602554 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctc 42602634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 29503271 - 29503349
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| | | ||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||||    
T  29503271 aacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 29503349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 40416466 - 40416384
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | |||||||||| |||||||||||||||  |||||||||| ||||||||||||| |||||||||||    
T  40416466 aacccacttgggttggcctagtggtattgacttggaacctgggagtatgctcctccttaaggtctcaggttcgattctctctg 40416384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 19322768 - 19322849
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    ||||||||||||||  || ||||||||||| |||| ||||||||| ||||||||| |||||||||| |||||||||||||||    
T  19322768 aacccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctctct 19322849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 11251106 - 11251169
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||| || ||| || |||||||||||||||||||||||||||||||||||||    
T  11251106 agtggtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctg 11251169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 19244108 - 19244191
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||||||| ||| | |||||||| ||||| ||||| ||| |||||||||| |||||||||||||| |||||||||||    
T  19244108 caacccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctg 19244191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 1729816 - 1729898
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | |||||||||||||||| || |||||| |||||||||||| |||||| || ||||||||||||||    
T  1729816 aacccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcctctaggtcttagatttgattctctctg 1729898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 37480075 - 37480153
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| | |  ||||||||||||||| ||||| ||| ||||||||||||||||||||||||| |||||||    
T  37480075 aacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 37480153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 16918653 - 16918572
Alignment:
Q  163 acccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||||| | | ||||||||||| |||| | ||||||| ||||||||||||||||||| ||||| |||||||||||    
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctctctg 16918572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 4060290 - 4060208
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | ||||||||||| ||| |||||| ||| ||||| ||||||||| ||||||||| |||||||||||    
T  4060290 aacccacttgggttggcctagtggtattggtttgaaacctgagagtgtgcttctcctcaagatctcaggttcgattctctctg 4060208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 21195733 - 21195671
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||||||| ||||| ||||    
T  21195733 agtggtataggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattccctct 21195671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 34041664 - 34041582
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | |||||||||| ||| | | ||| ||| ||||||||||||||||||||||||||||||| |||||    
T  34041664 aacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctcaggtttgattccctctg 34041582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 4262354 - 4262298
Alignment:
Q  186 tattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||    
T  4262354 tattggcttgggacctggcagtgtgctcctcctcaaggtctcaggttcgattctctc 4262298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 19016030 - 19016109
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||||| |||   |||||||||||||  || |||||| |||||||||||| |||||||| |||||||||||    
T  19016030 caacccacttgggttggtctgatggtattggcttgagacttgggagtgtgctcctcctcgaggtctcaagtttgattctc 19016109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 23052579 - 23052521
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||||| || |||||| ||||| ||||||||||||||||||| |||||||    
T  23052579 gtggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctc 23052521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 39715012 - 39715070
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||| ||||| ||||||||| |||||||||||| |||||||||||| |||||||    
T  39715012 gtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39715070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 45026743 - 45026825
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||| || ||| | | ||| || |||||||| | |||| ||||||||||||||||||||| |||||||||||||||    
T  45026743 aacccacttggtttggtctattagtaatgacttggaacttaggagtgtgctcctcctcaaggtctcatgtttgattctctctg 45026825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 12086185 - 12086129
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    ||||||||||||||| |||||| || |||||||||||||||||||| |||| |||||    
T  12086185 gtggtattggcttgggacctggaagtgtgctcctcctcaaggtctcgggttcgattc 12086129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 12994452 - 12994376
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    ||||| |||| ||| ||| |||||||||| ||||| ||||||||| ||||||||||| ||||||||| ||| |||||    
T  12994452 aacccgcttgagttggtctagtggtattgacttgggacctgggagtgtgctcctccttaaggtctcaagttcgattc 12994376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 28846691 - 28846766
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgatt 237  Q
    ||||||||| ||||  || |||||||||| ||||| ||||||||| |||||||||||| | |||||||||| ||||    
T  28846691 aacccacttaggttgatctagtggtattgacttgggacctgggagtgtgctcctcctcgatgtctcaggttcgatt 28846766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 30410606 - 30410543
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||| |||| |||| |||||||||||||||| |||| ||| |||| ||||||    
T  30410606 agtggtattggcttgggacctaggagtgtgctcctcctcaaggactcatgttcgattttctctg 30410543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 3697475 - 3697398
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| |||   |||||||||||||| |||| |||| |||||||| ||||||||||| |||| |||||||    
T  3697475 aacccacttgggttggtctgatggtattggcttgggaccttggagagtgctcct-ctcaaggtctctggttcgattctc 3697398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 13803495 - 13803577
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||| |||||||  || |||| ||||||||||  || | |||| ||||||||||||||||||||||||| |||| ||||||    
T  13803495 aacccatttgggttgatctagtgatattggcttgagacttaggagtgtgctcctcctcaaggtctcaggttcgattatctctg 13803577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 21213789 - 21213847
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||||| ||||||||| ||| |||||||  |||||||||||| |||||||    
T  21213789 gtggtattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctc 21213847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 5147755 - 5147674
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||| ||| |||||||||| ||||  | |||||||  ||||||| ||||||||||| | || ||||||||||    
T  5147755 aacccacttgggttggtctagtggtattgacttgagatctgggagtatgctccttctcaaggtctcggattcgattctctct 5147674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 7799111 - 7799031
Alignment:
Q  162 aacccacttgggttcgtccag-tggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| |||| | |||||||||||||| || |||||| |||||||||||| || |||||| || |||||||||    
T  7799111 aacccacttgggtt-gtcctggtggtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctc 7799031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 12517803 - 12517751
Alignment:
Q  188 ttggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||| |||| ||||  |||||||||||||||||||| |||||||||||    
T  12517803 ttggcttgggaccttggagtttgctcctcctcaaggtctcatgtttgattctc 12517751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 43964064 - 43963989
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    |||||||||||||| ||| ||| || |||| |||| |||| |||| |||||||| |||||||||||| |||||||||    
T  43964064 aacccacttgggttggtctagtagtgttggtttgggaccttggagtgtgctcct-ctcaaggtctcatgtttgattc 43963989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 26545840 - 26545919
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    |||||||||||||| ||   |||||||| |||||| | |||| || |||||||| ||| |||||||| ||||||||||||    
T  26545840 aacccacttgggttggtttggtggtattagcttgggatctggaagtgtgctccttctcgaggtctcaagtttgattctct 26545919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 30808723 - 30808644
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    |||||||||||||| |||  ||| ||||||||||  ||||| ||   ||||||||||||||||||||| || ||||||||    
T  30808723 aacccacttgggttggtctggtgatattggcttgagacctgagaatatgctcctcctcaaggtctcagtttcgattctct 30808644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 14500277 - 14500359
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||| || | | ||||||||  |||||  | ||||||| |||||||||||| ||||||||| || |||||||||||    
T  14500277 aacccacttggtttggcctagtggtataagcttgagatctgggagtgtgctcctcctctaggtctcagattcgattctctctg 14500359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 30359674 - 30359720
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctca 228  Q
    ||||| ||||||||| |||| |||| |||||||||||||||||||||    
T  30359674 gtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctca 30359720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 23140981 - 23140908
Alignment:
Q  169 ttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||| ||| | |||||||||||||| || |||| | ||| |||||||||| ||||| |||| |||||||||    
T  23140981 ttgggttggtctaatggtattggcttgggacatgggtgtgtgttcctcctcaatgtctctggttcgattctctc 23140908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 23552771 - 23552698
Alignment:
Q  169 ttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||| ||| | |||||||||||||| || |||| | ||| |||||||||| ||||| |||| |||||||||    
T  23552771 ttgggttggtctaatggtattggcttgggacatgggtgtgtgttcctcctcaatgtctctggttcgattctctc 23552698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 26482114 - 26482170
Alignment:
Q  183 tggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||| ||||||||| |||| |||| ||||||||| ||||||||||||||| |||||||    
T  26482114 tggtgttggcttgggacctaggagtgtgctcctc-tcaaggtctcaggttcgattctc 26482170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 6099568 - 6099517
Alignment:
Q  188 ttggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||| |||| |||| ||||||||| ||||||||||||||| |||||||    
T  6099568 ttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcgattctc 6099517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 16131738 - 16131670
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcagg 230  Q
    |||||| |||||||  ||||||||||| |||||| |||  | ||| ||||||||||||||||| |||||    
T  16131738 aacccatttgggttgctccagtggtataggcttgaaactggagagtgtgctcctcctcaaggtttcagg 16131670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 17737681 - 17737625
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgatt 237  Q
    ||||||||||| |||  || |||||| ||||||||||||||||||||| ||| ||||    
T  17737681 agtggtattggtttgtgacttgggagtgtgctcctcctcaaggtctcatgttcgatt 17737625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 29964834 - 29964874
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaa 221  Q
    ||||||||||||||| ||||||||||  |||||||||||||    
T  29964834 agtggtattggcttgaaacctgggagcatgctcctcctcaa 29964874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 242
Target Start/End: Complemental strand, 15401 - 15319
Alignment:
Q  160 acaacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||||| |||  ||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||    
T  15401 acaacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 20019 - 19956
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  20019 agtggtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctctg 19956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 95044 - 94977
Alignment:
Q  165 ccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    ||||||||||| | | |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggtt 94977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 3624582 - 3624660
Alignment:
Q  164 cccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||| | | |||||||||||||||| ||||||||| ||||||||| ||||||||||||||| |||||||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 3624660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 16852340 - 16852418
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| | | |||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||    
T  16852340 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 16852418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 18540298 - 18540380
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | |||||||||||||||| ||||||||| || || ||||||||||||||||||| |||||||||||    
T  18540298 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctg 18540380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 19703563 - 19703485
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| | | |||||||||||||||| ||||| ||| ||||||||||||||||||||||||| |||||||    
T  19703563 aacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 19703485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 44780190 - 44780109
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||||||||| | | ||||| |||||||||| || |||||| ||||||||||||||||||||||||||||||| ||||    
T  44780190 aacccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctct 44780109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 8794402 - 8794339
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||||||||||||||| || ||||||||||||| ||||||||||| |||||||||||    
T  8794402 agtggtattggcttggaacctggaagtgtgctcctcctcagggtctcaggttcgattctctctg 8794339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 2203494 - 2203560
Alignment:
Q  164 cccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcagg 230  Q
    |||||||||||| | | |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagg 2203560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 12988428 - 12988510
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||| || | | ||||||||||||||||||||||| || ||||||||||||||||| ||||||| ||| |||||||    
T  12988428 aacccacttggattggcctagtggtattggcttggaacctggaagtgtgctcctcctcaaggtttcaggttcgatcctctctg 12988510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 33017238 - 33017296
Alignment:
Q  186 tattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||    
T  33017238 tattggcttggaacctggaagtgtgctcctcctcaaggtctcaggttcgattctctctg 33017296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 968382 - 968442
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||    
T  968382 gtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 968442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 5264544 - 5264611
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcag 229  Q
    |||||||||||||| | | |||||||||||||||||||||||||  |||||||||||| |||||||||    
T  5264544 aacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggtctcag 5264611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 6536539 - 6536602
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||  ||||||||||    
T  6536539 agtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctg 6536602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 13129668 - 13129750
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | ||||||| ||||| |||| || |||||| | ||||||||||||||| ||||||| |||||||||||    
T  13129668 aacccacttgggttagcccagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggttcgattctctctg 13129750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 30483961 - 30483879
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    ||||||||||||||| | |||||||||||||||||| |  |||||| |||||||||||||  ||||||||||  |||||||||    
T  30483961 caacccacttgggttggcccagtggtattggcttgggatatgggagtgtgctcctcctcagagtctcaggttcaattctctct 30483879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 11793597 - 11793520
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattct 239  Q
    |||||||||||||| |||  ||||| || |||||| |||| |||| ||||||||||||||||||| ||||||||||||    
T  11793597 aacccacttgggttggtcttgtggtgttcgcttgggaccttggagtgtgctcctcctcaaggtcttaggtttgattct 11793520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 26688864 - 26688935
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    ||||||||||||||| | |  ||||| ||||||||| |||| |||| |||||||||||||||||||||||||    
T  26688864 caacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggtt 26688935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 35690121 - 35690058
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||| | ||||| |  |||||||||||||||||||||||| |||||||||||    
T  35690121 agtggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctg 35690058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 11819795 - 11819857
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    |||||||| ||||||| || |||||| ||||||||||||||||||||||||| ||||| ||||    
T  11819795 agtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactct 11819857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 28783080 - 28783138
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||| ||| |||||||    
T  28783080 gtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctc 28783138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 27750750 - 27750811
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    ||||||| ||||||| || |||||| ||||||||||||||||||||||||| ||||| ||||    
T  27750750 gtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctct 27750811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 11518953 - 11518877
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    |||||||||||||| | | |||||||| |||||||||| |||||| || | |||||||||||||| ||||| |||||    
T  11518953 aacccacttgggttagcctagtggtataggcttggaacttgggagtgtacccctcctcaaggtcttaggttcgattc 11518877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 20994535 - 20994451
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcct-cctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||||||| | | |||||||||| ||||| ||||||||| |||||||| |||||| |||||||| | |||| ||||||    
T  20994535 caacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctccctcaaagtctcaggatcgattatctctg 20994451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 29858105 - 29858049
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattc 238  Q
    ||||||||||||||| ||| ||||| |||||||||||| |||||||||||| |||||    
T  29858105 gtggtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattc 29858049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 23361705 - 23361643
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||| ||||| |  |||||| |||||||||||||||||||||||||  ||||||||||    
T  23361705 gtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctg 23361643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 23874458 - 23874388
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    |||||||||||||| | | |||||||||||||||| ||||||||   ||| ||||||| ||||||||||||    
T  23874458 aacccacttgggttggcctagtggtattggcttgggacctgggaatctgcgcctcctcgaggtctcaggtt 23874388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 18897166 - 18897243
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattct 239  Q
    |||||||||||||| | | |||||| |||| |||| ||||  ||| ||||||||||||||||||||| ||| ||||||    
T  18897166 aacccacttgggttggcctagtggtgttggtttgggaccttagagtgtgctcctcctcaaggtctcatgttcgattct 18897243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 22193420 - 22193360
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||| ||| |||||  |||||||| ||||||||||||||||||| ||||| |||||||||    
T  22193420 gtggtgttgacttggggcctgggagtgtgctcctcctcaaggtcttaggttcgattctctc 22193360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 28787526 - 28787494
Alignment:
Q  208 gtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||||||||||||||||||||||    
T  28787526 gtgctcctcctcaaggtctcaggtttgattctc 28787494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 29431010 - 29431090
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    ||||||||||||||| | |  | ||||||||||||| || |||||| |||||||||||  ||| |||||||| ||||||||    
T  29431010 caacccacttgggttggcctggcggtattggcttgggacttgggagtgtgctcctccttgaggcctcaggttcgattctct 29431090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 35641977 - 35641897
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| |||  ||||||| ||||||  |  |||||| |||||||||||| | |||||||||| |||||||||    
T  35641977 aacccacttgggttggtctggtggtatcggcttgagatttgggagtgtgctcctcctcgatgtctcaggttcgattctctc 35641897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 40137012 - 40136961
Alignment:
Q  188 ttggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||| |||| |||| ||||||||| |||||||||||||||||||||||    
T  40137012 ttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggtttgattctc 40136961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 3058125 - 3058046
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    |||||| ||||||| |||  |||||||||| ||||  | |||||| |||||||||  |||||||||||||| ||||||||    
T  3058125 aacccatttgggttggtctggtggtattggtttgggtcttgggagtgtgctcctctgcaaggtctcaggttcgattctct 3058046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 4435996 - 4436055
Alignment:
Q  183 tggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||  || |||||| ||||||||||||||||||||||  | |||||||||    
T  4435996 tggtattggcttgagacatgggagagtgctcctcctcaaggtctcagactcgattctctc 4436055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 18546435 - 18546360
Alignment:
Q  165 ccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||| |||| ||| ||||||||||  |||| ||||| |||  ||||||||||| |||||||||||| |||||||    
T  18546435 ccacttaggttggtctagtggtattgatttgggacctgagagcatgctcctcctcgaggtctcaggttcgattctc 18546360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 6436611 - 6436549
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||||||| || | |||| |||||||||| ||||||||||| || ||||| |||||    
T  6436611 gtggtattggcttgggacttaggagtgtgctcctccgcaaggtctcagattcgattccctctg 6436549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 6530807 - 6530884
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| | |  ||||| ||||||||| |||| |||| |||||||| ||||| |||||||||| |||||||    
T  6530807 aacccacttgggttggcctggtggtgttggcttgggacctaggagtgtgctcct-ctcaatgtctcaggttcgattctc 6530884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 32992778 - 32992858
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttg--gaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||||||||||| |||  ||| | ||||||||  | |||| |||| |||||||||||||||||| ||||||||| ||||    
T  32992778 aacccacttgggttggtctggtgatgttggcttgtgggaccttggagtgtgctcctcctcaaggtcccaggtttgactctc 32992858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 3524451 - 3524407
Alignment:
Q  188 ttggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    ||||||||| |||| |||| ||||||||||||||||||| |||||    
T  3524451 ttggcttgggaccttggagtgtgctcctcctcaaggtcttaggtt 3524407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 7140729 - 7140789
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||||||||| | ||||| | |||||||||||| || |||||| || |||||||||    
T  7140729 gtggtattggcttgggatctgggtgtgtgctcctcctcgagctctcagattcgattctctc 7140789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 12281514 - 12281574
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||||||||| ||||| ||| |||| ||||||| ||||||||| || |||| ||||    
T  12281514 gtggtattggcttgggacctgagagtgtgcccctcctcgaggtctcagattcgattttctc 12281574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 22269009 - 22268930
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| | |  ||||| ||||||||| |||| |||| ||||| || |||||||||||| |||||||| ||||    
T  22269009 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctc 22268930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 34628666 - 34628722
Alignment:
Q  186 tattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||||| | ||||||| ||| | |||||||| |||||||||| |||||||||    
T  34628666 tattggcttgggatctgggagtgtgtttctcctcaaagtctcaggttcgattctctc 34628722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 36205233 - 36205273
Alignment:
Q  200 ctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||| ||||||||||||||||||||| ||| |||||||    
T  36205233 ctgggagtgtgctcctcctcaaggtctcatgttcgattctc 36205273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 18318 - 18381
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||| |||||||||||| ||||||  ||||||||||||||||| |||||||||||||||||||    
T  18318 agtggcattggcttggaatctgggattgtgctcctcctcaaggtttcaggtttgattctctctg 18381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 222528 - 222588
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    ||||||| |||||||||| ||| ||  ||| ||||||||||||| ||||||||||||||||    
T  222528 agtggtactggcttggaatctgagattgtgttcctcctcaaggtttcaggtttgattctct 222588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 11548 - 11610
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||||||||| | ||||||| |||||||||||| |||||||||||| |||||||||||    
T  11548 gtggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 11610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 2546 - 2468
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    |||||| ||||||| |||| |||||||||| || | | ||||||| ||||||||||||||||||||||||| |||||||    
T  2546 aacccatttgggttggtccggtggtattggttttggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 13102 - 13042
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||||||||  | ||||||| ||||||||||||||||||||||||| |||||||||    
T  13102 gtggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 13042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 25413 - 25341
Alignment:
Q  172 ggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||| |||||||||||||||  || |||||| |||||||| |||||||||||||||| |||| ||||||    
T  25413 ggttcgtctagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcaggttcgattatctctg 25341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 35465 - 35383
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    ||||||||| |||| | |||||||||||||||||||| || ||||  |||||||||||||||||| | ||| |||| ||||||    
T  35465 aacccacttcggtttgcccagtggtattggcttggaatctaggagtatgctcctcctcaaggtcttaagttcgattatctctg 35383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 42596 - 42517
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctct 241  Q
    |||||| ||||||| | | |||||||||| ||||||| |||||||  ||||||||||||  |||||||||| ||||||||    
T  42596 aacccagttgggttggcctagtggtattgacttggaatctgggagtatgctcctcctcagagtctcaggttcgattctct 42517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 41709 - 41627
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||| | | |||||||||||||||  | ||| |||  ||||||||||| ||||||||||||  ||||||||||    
T  41709 aacccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctg 41627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 81636 - 81562
Alignment:
Q  166 cacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||| |||| ||| |||| |||||| |||||| |||| || |||||||||||||||||||||| || |||||||    
T  81636 cactttggttggtctagtgatattggtttggaatctggaagtgtgctcctcctcaaggtctcagattcgattctc 81562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 896 - 835
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctct 243  Q
    ||||||||||||||| | ||||||  |||||||||||| | |||||||||| ||||||||||    
T  896 gtggtattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttcgattctctct 835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 244
Target Start/End: Complemental strand, 2740 - 2705
Alignment:
Q  209 tgctcctcctcaaggtctcaggtttgattctctctg 244  Q
    |||||||||||||||||||||||| |||||||||||    
T  2740 tgctcctcctcaaggtctcaggttcgattctctctg 2705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 6976 - 6925
Alignment:
Q  181 agtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtt 232  Q
    |||||||||||||||| ||  ||||| |||||||||||||| ||||||||||    
T  6976 agtggtattggcttgggactggggagtgtgctcctcctcaaagtctcaggtt 6925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 15833 - 15775
Alignment:
Q  182 gtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctc 240  Q
    ||||||||||||||| |  | ||||  |||||||||||||||||||| |||||||||||    
T  15833 gtggtattggcttgggattttggagtatgctcctcctcaaggtctcaagtttgattctc 15775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 7802 - 7725
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattct 239  Q
    |||| ||||||||| |||  ||||||||||||||  |||||  || ||||||||||| ||||||||| ||| ||||||    
T  7802 aaccaacttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattct 7725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 112281 - 112362
Alignment:
Q  161 caacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    ||||||||||||||| | |  || |||||||||||||| ||||||| ||| ||||| |  |||||| ||||| |||||||||    
T  112281 caacccacttgggttggcctggttgtattggcttggaatctgggagtgtggtcctctttgaggtctgaggttcgattctctc 112362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 15047 - 14968
Alignment:
Q  162 aacccacttgggttcgtccagtggtattggcttggaacctgggagggtgctcctcctcaaggtctcaggtttgattctctc 242  Q
    |||||||||||||| |||   || ||||||||| | | |||||||  ||||||||||||| |||||||||| |||||||||    
T  15047 aacccacttgggttagtctgatgctattggcttaggaactgggagtatgctcctcctcaa-gtctcaggttcgattctctc 14968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University