View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0946_low_1 (Length: 896)

Name: NF0946_low_1
Description: NF0946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0946_low_1
NF0946_low_1
[»] chr5 (42 HSPs)
chr5 (370-601)||(12372333-12372564)
chr5 (370-597)||(13278100-13278330)
chr5 (369-588)||(19229954-19230173)
chr5 (370-570)||(19228857-19229057)
chr5 (370-597)||(6803497-6803723)
chr5 (370-601)||(18654315-18654550)
chr5 (372-601)||(18655523-18655749)
chr5 (381-549)||(9083216-9083384)
chr5 (374-570)||(39349503-39349699)
chr5 (370-570)||(39350544-39350744)
chr5 (386-593)||(39164091-39164295)
chr5 (374-570)||(12373616-12373816)
chr5 (372-553)||(9082000-9082181)
chr5 (370-588)||(13276838-13277048)
chr5 (370-457)||(8447096-8447183)
chr5 (429-601)||(4031899-4032073)
chr5 (289-402)||(18655659-18655772)
chr5 (291-399)||(8447077-8447185)
chr5 (291-402)||(9083303-9083414)
chr5 (287-402)||(13276815-13276930)
chr5 (370-452)||(6801993-6802075)
chr5 (289-402)||(9081977-9082090)
chr5 (287-399)||(12372310-12372422)
chr5 (290-392)||(18654295-18654397)
chr5 (288-402)||(19230080-19230194)
chr5 (330-402)||(12373728-12373800)
chr5 (290-402)||(39350652-39350764)
chr5 (293-402)||(19228840-19228949)
chr5 (433-570)||(4032924-4033061)
chr5 (330-402)||(39164095-39164167)
chr5 (374-441)||(35952464-35952531)
chr5 (330-401)||(39349519-39349590)
chr5 (330-399)||(13278241-13278310)
chr5 (334-392)||(6802017-6802075)
chr5 (541-601)||(6802406-6802465)
chr5 (334-402)||(6803631-6803699)
chr5 (374-426)||(25001665-25001717)
chr5 (79-174)||(30213403-30213498)
chr5 (59-164)||(40172584-40172692)
chr5 (531-588)||(30674712-30674771)
chr5 (501-575)||(38603646-38603721)
chr5 (532-588)||(14356607-14356664)
[»] chr6 (34 HSPs)
chr6 (374-601)||(34995375-34995601)
chr6 (370-601)||(32348908-32349136)
chr6 (370-600)||(34996633-34996860)
chr6 (370-600)||(3000668-3000892)
chr6 (370-601)||(11801210-11801441)
chr6 (370-601)||(32712374-32712602)
chr6 (372-580)||(32347829-32348037)
chr6 (375-570)||(32713782-32713977)
chr6 (374-570)||(18572908-18573103)
chr6 (370-568)||(19383056-19383246)
chr6 (369-486)||(29479177-29479294)
chr6 (289-402)||(11801349-11801462)
chr6 (370-457)||(18574305-18574392)
chr6 (330-398)||(3000804-3000872)
chr6 (286-402)||(18574300-18574416)
chr6 (330-402)||(29479201-29479273)
chr6 (290-402)||(32349044-32349156)
chr6 (330-402)||(34996768-34996840)
chr6 (290-400)||(18572884-18572994)
chr6 (512-601)||(18574181-18574270)
chr6 (289-402)||(32347806-32347919)
chr6 (330-402)||(32713890-32713962)
chr6 (501-593)||(21095255-21095347)
chr6 (330-402)||(34995391-34995462)
chr6 (370-419)||(29477778-29477827)
chr6 (452-561)||(21094506-21094615)
chr6 (501-557)||(27719885-27719941)
chr6 (369-431)||(19788265-19788327)
chr6 (495-601)||(29477884-29477996)
chr6 (502-601)||(7629675-7629773)
chr6 (287-402)||(32712351-32712466)
chr6 (495-570)||(13561417-13561493)
chr6 (369-431)||(19761960-19762022)
chr6 (345-399)||(19383162-19383218)
[»] chr7 (94 HSPs)
chr7 (370-600)||(18788429-18788659)
chr7 (370-601)||(43113693-43113924)
chr7 (330-601)||(12630542-12630814)
chr7 (370-601)||(29186683-29186914)
chr7 (370-570)||(19217646-19217846)
chr7 (370-601)||(18787167-18787398)
chr7 (370-580)||(43962458-43962668)
chr7 (370-601)||(45399878-45400109)
chr7 (369-570)||(44420422-44420622)
chr7 (370-570)||(44417476-44417676)
chr7 (370-570)||(48793415-48793615)
chr7 (370-570)||(13750535-13750735)
chr7 (370-586)||(9391538-9391754)
chr7 (374-570)||(29187929-29188125)
chr7 (374-601)||(9392677-9392910)
chr7 (369-586)||(13597162-13597378)
chr7 (370-601)||(37237096-37237324)
chr7 (370-588)||(7011652-7011871)
chr7 (370-588)||(7027010-7027229)
chr7 (370-567)||(48792462-48792659)
chr7 (370-600)||(43960964-43961179)
chr7 (370-588)||(27072535-27072753)
chr7 (370-588)||(27205560-27205778)
chr7 (370-567)||(3537445-3537641)
chr7 (370-457)||(3538575-3538662)
chr7 (370-601)||(32518440-32518663)
chr7 (370-560)||(32519658-32519848)
chr7 (373-556)||(44746748-44746931)
chr7 (369-549)||(44230445-44230625)
chr7 (434-570)||(44748462-44748598)
chr7 (287-401)||(19217623-19217737)
chr7 (434-601)||(43114955-43115122)
chr7 (294-403)||(3537429-3537538)
chr7 (288-401)||(29186661-29186774)
chr7 (290-402)||(43113673-43113785)
chr7 (287-399)||(48792439-48792551)
chr7 (746-856)||(18852041-18852157)
chr7 (291-402)||(13750643-13750754)
chr7 (285-399)||(43962579-43962693)
chr7 (288-401)||(32519757-32519870)
chr7 (512-601)||(37235945-37236034)
chr7 (287-402)||(44417453-44417568)
chr7 (434-588)||(26005434-26005588)
chr7 (290-399)||(48793526-48793635)
chr7 (330-402)||(27072661-27072733)
chr7 (330-402)||(27205580-27205652)
chr7 (286-398)||(29188041-29188153)
chr7 (330-398)||(44420533-44420601)
chr7 (374-457)||(12630526-12630609)
chr7 (330-401)||(32518460-32518531)
chr7 (495-601)||(44231726-44231835)
chr7 (291-401)||(9391519-9391629)
chr7 (370-428)||(45688886-45688944)
chr7 (370-471)||(37235832-37235933)
chr7 (330-402)||(44230466-44230538)
chr7 (288-402)||(18788567-18788681)
chr7 (520-601)||(9357664-9357745)
chr7 (330-399)||(13597183-13597252)
chr7 (291-398)||(3538574-3538681)
chr7 (433-568)||(13599158-13599294)
chr7 (495-593)||(45398667-45398764)
chr7 (345-402)||(9392822-9392879)
chr7 (291-384)||(45688867-45688960)
chr7 (330-402)||(7011672-7011744)
chr7 (330-402)||(7027030-7027102)
chr7 (334-402)||(18787191-18787259)
chr7 (289-384)||(42611433-42611528)
chr7 (374-428)||(42611458-42611512)
chr7 (290-379)||(26006773-26006862)
chr7 (290-379)||(27071019-27071108)
chr7 (290-379)||(27207205-27207294)
chr7 (334-402)||(37237234-37237300)
chr7 (85-170)||(43853786-43853871)
chr7 (370-419)||(44231892-44231941)
chr7 (294-402)||(44746729-44746837)
chr7 (292-379)||(7057359-7057446)
chr7 (370-416)||(7057382-7057428)
chr7 (370-428)||(26006784-26006842)
chr7 (289-402)||(37235811-37235924)
chr7 (370-441)||(19008950-19009021)
chr7 (370-441)||(19016725-19016796)
chr7 (335-402)||(45400017-45400084)
chr7 (374-416)||(27071043-27071085)
chr7 (374-416)||(27207228-27207270)
chr7 (358-399)||(43961000-43961041)
chr7 (501-564)||(3538478-3538541)
chr7 (532-567)||(13749183-13749218)
chr7 (370-401)||(26005430-26005461)
chr7 (495-565)||(45688992-45689060)
chr7 (331-381)||(19016725-19016775)
chr7 (495-601)||(27071145-27071249)
chr7 (495-601)||(27207064-27207168)
chr7 (495-587)||(22794206-22794299)
chr7 (501-592)||(36395958-36396051)
[»] chr8 (50 HSPs)
chr8 (370-601)||(26364760-26364988)
chr8 (374-601)||(30640821-30641047)
chr8 (370-601)||(9244084-9244315)
chr8 (370-599)||(521970-522196)
chr8 (372-601)||(30644576-30644801)
chr8 (370-601)||(20308942-20309173)
chr8 (370-601)||(21095575-21095806)
chr8 (374-601)||(43584431-43584655)
chr8 (374-570)||(9245330-9245526)
chr8 (369-601)||(26366062-26366294)
chr8 (370-574)||(20309946-20310151)
chr8 (370-574)||(21096579-21096784)
chr8 (377-570)||(41636857-41637050)
chr8 (370-588)||(41638035-41638251)
chr8 (373-561)||(34642687-34642874)
chr8 (370-601)||(43585813-43586043)
chr8 (370-601)||(34643833-34644058)
chr8 (287-401)||(9244061-9244175)
chr8 (291-399)||(26364741-26364849)
chr8 (293-401)||(34642667-34642775)
chr8 (289-379)||(3714550-3714640)
chr8 (289-402)||(20308921-20309034)
chr8 (289-402)||(21095554-21095667)
chr8 (372-453)||(31202987-31203068)
chr8 (286-399)||(43584403-43584516)
chr8 (330-402)||(41636870-41636942)
chr8 (330-398)||(9245442-9245510)
chr8 (291-402)||(41638159-41638270)
chr8 (330-399)||(522107-522176)
chr8 (334-399)||(30644714-30644779)
chr8 (372-428)||(3714561-3714617)
chr8 (330-401)||(20310060-20310131)
chr8 (330-401)||(21096693-21096764)
chr8 (495-570)||(22012281-22012356)
chr8 (330-399)||(30640837-30640905)
chr8 (512-572)||(31203076-31203136)
chr8 (495-570)||(22013158-22013233)
chr8 (330-393)||(31203005-31203068)
chr8 (495-565)||(3714443-3714513)
chr8 (330-379)||(43134079-43134128)
chr8 (344-379)||(3713114-3713149)
chr8 (374-428)||(43134090-43134144)
chr8 (379-428)||(3713090-3713138)
chr8 (370-419)||(22012176-22012225)
chr8 (512-561)||(43133976-43134025)
chr8 (334-402)||(26366201-26366269)
chr8 (330-398)||(34643971-34644038)
chr8 (495-565)||(3713186-3713256)
chr8 (80-130)||(13341371-13341421)
chr8 (370-419)||(22013289-22013338)
[»] chr4 (67 HSPs)
chr4 (59-290)||(50745104-50745352)
chr4 (370-601)||(34095527-34095758)
chr4 (370-601)||(22621886-22622114)
chr4 (370-570)||(7261442-7261642)
chr4 (59-290)||(18123751-18123999)
chr4 (370-601)||(17356380-17356611)
chr4 (370-601)||(56234889-56235119)
chr4 (370-588)||(38032301-38032519)
chr4 (374-601)||(8815219-8815452)
chr4 (382-597)||(22623018-22623230)
chr4 (369-601)||(10802907-10803139)
chr4 (369-601)||(18091598-18091830)
chr4 (370-570)||(38031187-38031387)
chr4 (374-570)||(23757869-23758066)
chr4 (370-554)||(17357778-17357962)
chr4 (374-570)||(48501223-48501418)
chr4 (370-588)||(10804076-10804294)
chr4 (372-601)||(48499385-48499613)
chr4 (374-570)||(5433306-5433502)
chr4 (668-794)||(48081067-48081196)
chr4 (370-570)||(8814154-8814357)
chr4 (370-486)||(35193179-35193295)
chr4 (370-486)||(56233743-56233859)
chr4 (330-447)||(48081552-48081669)
chr4 (370-486)||(35191836-35191952)
chr4 (371-597)||(36074666-36074892)
chr4 (291-402)||(10802889-10803000)
chr4 (289-402)||(7261550-7261663)
chr4 (452-570)||(35927015-35927133)
chr4 (373-457)||(48080292-48080376)
chr4 (287-402)||(38031164-38031279)
chr4 (288-402)||(22621864-22621978)
chr4 (294-396)||(17357876-17357978)
chr4 (512-582)||(48081454-48081524)
chr4 (370-439)||(34121318-34121387)
chr4 (289-401)||(10804203-10804315)
chr4 (330-402)||(22623150-22623222)
chr4 (330-402)||(34095666-34095738)
chr4 (291-402)||(38032427-38032538)
chr4 (370-457)||(48081602-48081689)
chr4 (292-398)||(23757982-23758088)
chr4 (370-428)||(48463025-48463083)
chr4 (330-402)||(8815364-8815436)
chr4 (330-402)||(56233763-56233835)
chr4 (370-428)||(34122843-34122901)
chr4 (289-379)||(48463014-48463104)
chr4 (290-399)||(17356360-17356469)
chr4 (501-586)||(35925841-35925926)
chr4 (330-403)||(56235026-56235099)
chr4 (330-398)||(5433418-5433486)
chr4 (330-402)||(8814174-8814246)
chr4 (288-384)||(34122827-34122923)
chr4 (330-402)||(35193203-35193275)
chr4 (330-402)||(48499403-48499475)
chr4 (515-587)||(48081265-48081334)
chr4 (330-398)||(35191856-35191924)
chr4 (330-403)||(36074799-36074873)
chr4 (290-379)||(34121298-34121387)
chr4 (288-397)||(48080267-48080376)
chr4 (330-403)||(48501329-48501402)
chr4 (521-586)||(56233878-56233943)
chr4 (501-601)||(34122690-34122789)
chr4 (59-174)||(30495887-30496002)
chr4 (788-829)||(48080485-48080526)
chr4 (290-398)||(18091579-18091687)
chr4 (495-562)||(48462266-48462333)
chr4 (515-565)||(48462907-48462957)
[»] chr1 (54 HSPs)
chr1 (372-601)||(17244196-17244425)
chr1 (370-593)||(51468358-51468581)
chr1 (372-601)||(7111343-7111572)
chr1 (370-570)||(51693166-51693366)
chr1 (370-601)||(45229474-45229702)
chr1 (369-601)||(52759381-52759613)
chr1 (370-601)||(51468769-51469000)
chr1 (370-552)||(50484913-50485095)
chr1 (370-570)||(7110245-7110445)
chr1 (370-601)||(38235018-38235248)
chr1 (369-556)||(5488780-5488967)
chr1 (374-601)||(45228298-45228525)
chr1 (370-552)||(5488520-5488702)
chr1 (370-567)||(52086646-52086841)
chr1 (373-564)||(52087679-52087870)
chr1 (370-550)||(1823215-1823391)
chr1 (377-549)||(40187629-40187800)
chr1 (374-568)||(50483533-50483727)
chr1 (434-601)||(52761467-52761631)
chr1 (287-398)||(52086623-52086734)
chr1 (372-549)||(18819283-18819460)
chr1 (291-402)||(51468339-51468450)
chr1 (287-401)||(51693143-51693257)
chr1 (373-587)||(47533736-47533950)
chr1 (501-601)||(21203161-21203261)
chr1 (370-482)||(47532976-47533088)
chr1 (372-483)||(17245651-17245761)
chr1 (297-402)||(50485003-50485108)
chr1 (370-446)||(25181520-25181596)
chr1 (291-402)||(17244175-17244286)
chr1 (290-400)||(18819261-18819371)
chr1 (290-402)||(7110225-7110337)
chr1 (330-402)||(5488874-5488946)
chr1 (330-402)||(7111482-7111554)
chr1 (330-402)||(38235156-38235228)
chr1 (292-386)||(25181502-25181596)
chr1 (330-399)||(45229613-45229682)
chr1 (372-556)||(1821929-1822114)
chr1 (330-402)||(51468908-51468980)
chr1 (330-399)||(5488540-5488609)
chr1 (370-419)||(18820806-18820855)
chr1 (330-399)||(52087784-52087853)
chr1 (290-402)||(17245672-17245783)
chr1 (330-402)||(40187642-40187713)
chr1 (334-402)||(45228318-45228386)
chr1 (330-389)||(1821947-1822006)
chr1 (288-402)||(50483508-50483621)
chr1 (540-601)||(17245551-17245612)
chr1 (330-399)||(47532996-47533065)
chr1 (290-398)||(52759362-52759470)
chr1 (293-399)||(47533864-47533970)
chr1 (683-746)||(36808327-36808393)
chr1 (514-545)||(47533119-47533150)
chr1 (372-402)||(52761603-52761633)
[»] chr3 (116 HSPs)
chr3 (59-290)||(4359854-4360102)
chr3 (370-595)||(52521946-52522170)
chr3 (370-597)||(31937054-31937284)
chr3 (370-597)||(35759103-35759330)
chr3 (370-601)||(21727929-21728160)
chr3 (370-601)||(46903495-46903723)
chr3 (370-570)||(28777586-28777786)
chr3 (370-570)||(43393952-43394153)
chr3 (370-601)||(46902350-46902578)
chr3 (370-601)||(47431058-47431286)
chr3 (672-856)||(50880158-50880351)
chr3 (370-601)||(55209801-55210034)
chr3 (374-601)||(28776471-28776698)
chr3 (370-561)||(31938216-31938406)
chr3 (369-590)||(2232620-2232840)
chr3 (370-586)||(2233188-2233404)
chr3 (369-550)||(17742211-17742393)
chr3 (369-550)||(19043531-19043713)
chr3 (369-570)||(17116220-17116420)
chr3 (370-570)||(21729087-21729287)
chr3 (374-586)||(37609344-37609556)
chr3 (370-601)||(11348340-11348570)
chr3 (370-564)||(10979080-10979274)
chr3 (370-567)||(52525262-52525458)
chr3 (373-588)||(47917494-47917708)
chr3 (370-575)||(11346831-11347036)
chr3 (432-601)||(37610631-37610800)
chr3 (370-568)||(47429646-47429839)
chr3 (370-601)||(50880985-50881208)
chr3 (370-552)||(54354308-54354490)
chr3 (370-555)||(53180718-53180902)
chr3 (370-550)||(5691014-5691193)
chr3 (376-570)||(17740862-17741049)
chr3 (376-570)||(19042182-19042369)
chr3 (374-570)||(23073273-23073469)
chr3 (724-826)||(11348164-11348266)
chr3 (374-486)||(53764452-53764563)
chr3 (370-486)||(53765949-53766065)
chr3 (374-549)||(54353046-54353221)
chr3 (374-482)||(23091214-23091322)
chr3 (369-484)||(53178719-53178834)
chr3 (370-568)||(5689744-5689936)
chr3 (434-601)||(35758087-35758253)
chr3 (370-457)||(43392645-43392732)
chr3 (370-601)||(15290358-15290588)
chr3 (287-402)||(23091187-23091302)
chr3 (287-402)||(28777694-28777809)
chr3 (291-398)||(31938318-31938425)
chr3 (292-402)||(35759238-35759348)
chr3 (446-601)||(50879782-50879937)
chr3 (289-401)||(17116200-17116312)
chr3 (290-402)||(31937034-31937146)
chr3 (330-398)||(52525370-52525438)
chr3 (330-401)||(46902370-46902441)
chr3 (370-483)||(17117387-17117498)
chr3 (289-399)||(21727908-21728018)
chr3 (288-402)||(54354398-54354512)
chr3 (330-399)||(21729198-21729267)
chr3 (512-601)||(43392767-43392856)
chr3 (371-483)||(46986077-46986188)
chr3 (330-402)||(55209821-55209893)
chr3 (370-457)||(23072079-23072165)
chr3 (369-451)||(50879512-50879594)
chr3 (330-399)||(17742303-17742372)
chr3 (330-399)||(19043623-19043692)
chr3 (290-398)||(2232601-2232709)
chr3 (330-402)||(23072099-23072170)
chr3 (330-402)||(43392665-43392737)
chr3 (330-402)||(47431194-47431266)
chr3 (330-398)||(53764467-53764535)
chr3 (291-402)||(2233312-2233423)
chr3 (292-399)||(53765976-53766083)
chr3 (515-570)||(55210807-55210862)
chr3 (293-402)||(43394060-43394170)
chr3 (290-395)||(23073388-23073493)
chr3 (289-402)||(54353021-54353134)
chr3 (291-399)||(10979185-10979293)
chr3 (515-595)||(23072203-23072283)
chr3 (292-399)||(37609322-37609429)
chr3 (330-401)||(46903632-46903703)
chr3 (294-392)||(5691111-5691209)
chr3 (330-398)||(50881120-50881188)
chr3 (291-399)||(53178701-53178809)
chr3 (370-428)||(34014527-34014585)
chr3 (290-399)||(11348481-11348590)
chr3 (369-481)||(33113306-33113410)
chr3 (290-379)||(34014507-34014596)
chr3 (289-402)||(52521925-52522038)
chr3 (740-808)||(21728274-21728342)
chr3 (532-600)||(23091926-23091994)
chr3 (330-402)||(28776487-28776559)
chr3 (330-402)||(46986098-46986169)
chr3 (439-567)||(10978093-10978220)
chr3 (290-400)||(17117410-17117518)
chr3 (374-416)||(24376481-24376523)
chr3 (372-426)||(27749127-27749181)
chr3 (374-428)||(27750472-27750526)
chr3 (512-570)||(33111744-33111802)
chr3 (349-402)||(33113325-33113379)
chr3 (290-379)||(24376458-24376547)
chr3 (330-379)||(27750461-27750510)
chr3 (370-439)||(34015798-34015867)
chr3 (330-391)||(50879533-50879594)
chr3 (330-398)||(53180815-53180883)
chr3 (352-399)||(17740891-17740938)
chr3 (352-399)||(19042211-19042258)
chr3 (495-601)||(24376317-24376421)
chr3 (514-564)||(53101685-53101735)
chr3 (357-402)||(5689785-5689830)
chr3 (334-399)||(11346855-11346920)
chr3 (334-399)||(47917623-47917687)
chr3 (512-601)||(53764911-53764999)
chr3 (370-402)||(35758083-35758115)
chr3 (501-555)||(27749237-27749291)
chr3 (330-368)||(47429666-47429704)
chr3 (370-415)||(53101827-53101872)
[»] chr2 (31 HSPs)
chr2 (370-601)||(27892204-27892435)
chr2 (370-601)||(27891125-27891356)
chr2 (370-570)||(16602744-16602944)
chr2 (373-601)||(26388240-26388454)
chr2 (370-570)||(38243854-38244054)
chr2 (370-462)||(43814540-43814632)
chr2 (370-549)||(23832987-23833165)
chr2 (370-457)||(16604201-16604288)
chr2 (288-399)||(27892346-27892457)
chr2 (289-401)||(27891104-27891216)
chr2 (412-567)||(38242944-38243096)
chr2 (330-402)||(16602764-16602836)
chr2 (290-402)||(16604196-16604308)
chr2 (330-402)||(38243962-38244034)
chr2 (370-441)||(23833898-23833969)
chr2 (330-414)||(43814560-43814644)
chr2 (293-399)||(26388220-26388326)
chr2 (512-601)||(16604077-16604166)
chr2 (288-381)||(23833898-23833991)
chr2 (515-601)||(5033623-5033708)
chr2 (330-398)||(23833007-23833074)
chr2 (330-379)||(5033517-5033566)
chr2 (330-379)||(15496084-15496133)
chr2 (370-419)||(19577376-19577425)
chr2 (374-425)||(5033501-5033552)
chr2 (389-431)||(15496083-15496125)
chr2 (334-379)||(5034846-5034891)
chr2 (370-414)||(43814636-43814680)
chr2 (495-561)||(5034743-5034809)
chr2 (374-428)||(5034857-5034911)
chr2 (99-171)||(43631967-43632040)
[»] scaffold0878 (4 HSPs)
scaffold0878 (370-601)||(2892-3126)
scaffold0878 (434-601)||(1852-2018)
scaffold0878 (289-402)||(3034-3147)
scaffold0878 (370-402)||(1848-1880)
[»] scaffold0141 (4 HSPs)
scaffold0141 (370-601)||(31052-31283)
scaffold0141 (370-552)||(35202-35384)
scaffold0141 (291-402)||(31033-31144)
scaffold0141 (291-402)||(35292-35403)
[»] scaffold0049 (4 HSPs)
scaffold0049 (370-601)||(83529-83760)
scaffold0049 (370-552)||(79428-79610)
scaffold0049 (291-402)||(79409-79520)
scaffold0049 (291-402)||(83668-83779)
[»] scaffold1425 (4 HSPs)
scaffold1425 (370-570)||(1500-1700)
scaffold1425 (370-570)||(153-352)
scaffold1425 (290-402)||(1608-1720)
scaffold1425 (289-402)||(132-245)
[»] scaffold0018 (3 HSPs)
scaffold0018 (370-482)||(25332-25444)
scaffold0018 (291-402)||(25352-25463)
scaffold0018 (501-561)||(25252-25312)
[»] scaffold0026 (3 HSPs)
scaffold0026 (512-601)||(104412-104501)
scaffold0026 (370-457)||(104320-104407)
scaffold0026 (286-397)||(104296-104407)
[»] scaffold0349 (1 HSPs)
scaffold0349 (501-557)||(9307-9363)


Alignment Details
Target: chr5 (Bit Score: 151; Significance: 2e-79; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 12372333 - 12372564
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||| |||||||||||    
T  12372333 tcccttaacttatttgttttattcaatttggtctcataagtcttaactttctcaaacacgtctcttaacttatttgttttattcaatttgatccaatttt 12372432  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||| ||||        | | | |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12372433 gataattttaataccctaaaaaaacataccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttct 12372532  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | ||||||||| ||||||||||||||||||||    
T  12372533 tcttccctcatcttcatctacattcatccttc 12372564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 370 - 597
Target Start/End: Complemental strand, 13278330 - 13278100
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||  ||||||| |||||||||||    
T  13278330 tcccttaatttattttttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttttttacttcaatttgatccaatttt 13278231  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttact---ttcttct 566  Q
    |||| |||||||||| |        ||| | |||||| | | ||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||    
T  13278230 gataattttaatcccatagaaaaagagaccgttggattagggaggtctatcagattttatagtgtatcaccaacacctaatttatttactttattcttct 13278131  T
Q  567 tctttttccctcatattcatctacattcatc 597  Q
    |||| ||||||||| ||||||| ||||||||    
T  13278130 tcttcttccctcatcttcatctccattcatc 13278100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 369 - 588
Target Start/End: Complemental strand, 19230173 - 19229954
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattt 468  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||| ||||||||||||||||| | ||||||||    
T  19230173 atcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattt 19230074  T
Q  469 tgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
    ||||| ||||||||||||        ||| | |||||| ||| |||||||||| |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  19230073 tgataattttaatcccctcaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcatcaacacttaatttatttactttcttcttc 19229974  T
Q  569 tttttccctcatattcatct 588  Q
    || |||| |||| |||||||    
T  19229973 ttcttccatcatcttcatct 19229954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 370 - 570
Target Start/End: Original strand, 19228857 - 19229057
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||   |||||| ||||||||||||||||| | |||||||||    
T  19228857 tcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgttccttaactgatttcttttattcaatttggtccaatttt 19228956  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||| | |||||| ||| |||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  19228957 gataattttaatcccctaaaaaaagagaccgttggattacggaggtctattagattttatagtgtatcatcaacacctaatttatttactttcttcttct 19229056  T
Q  570 t 570  Q
    |    
T  19229057 t 19229057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 370 - 597
Target Start/End: Complemental strand, 6803723 - 6803497
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| |||||||||||||| ||||||||| |||||||||||| ||||||||||| ||   |||||||||||||||||||||||| | |||||||||    
T  6803723 tcccttaatttatttcttttatttaatttggtcacataagtcttaattttctcaaacatgtttcttaacttatttcttttattcaatttggtccaatttt 6803624  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| |||||||||  |        ||| | || ||| || || ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  6803623 gataattttaatcctttaaaaaaacagaccgttagattac-aaagtctatcagattttatagtgtatcaccaacatctaatttatttactttcttcttct 6803525  T
Q  570 ttttccctcatattcatctacattcatc 597  Q
    | ||||||||| ||||||||||||||||    
T  6803524 tcttccctcatcttcatctacattcatc 6803497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 18654315 - 18654550
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttatt-caattcgatccaattt 468  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||  |||| | ||||||||    
T  18654315 tcccttaatttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaaatttggtccaattt 18654414  T
Q  469 tgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttac---tttcttc 565  Q
    ||||  |||||||||| |        ||| | |||||| ||| ||||||||||||||||| | |||||||||||||||||||||||  ||   |||||||    
T  18654415 tgatcattttaatcccattaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaatttatcaacatttttcttc 18654514  T
Q  566 ttctttttccctcatattcatctacattcatccttc 601  Q
    ||||| ||||||||| ||||||| ||||||||||||    
T  18654515 ttcttcttccctcatcttcatcttcattcatccttc 18654550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 372 - 601
Target Start/End: Complemental strand, 18655749 - 18655523
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttga 471  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||| ||||||||||||||||||| | ||||| |||||    
T  18655749 ccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtcccttaatttatttcttttattcaatttggtccaactttga 18655650  T
Q  472 tacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttcttt 571  Q
    || ||||||||||||        ||| | ||| || ||||| |||||||||||||||   |||||||||||||  ||||||||| ||   || ||||||     
T  18655649 taattttaatcccctaaaaaaagagaccgttgaattacgaaagtctatcagattttacggtgtatcaccaacaattaatttattaac---ctccttcttc 18655553  T
Q  572 ttccctcatattcatctacattcatccttc 601  Q
    ||| ||||| |||||| |||||||||||||    
T  18655552 ttctctcattttcatccacattcatccttc 18655523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 381 - 549
Target Start/End: Complemental strand, 9083384 - 9083216
Alignment:
Q  381 atttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgatacttttaa 480  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||| ||| |||||||||||| | ||||||||||||| ||||||    
T  9083384 atttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaacttttttattttattcaatttggtccaattttgataattttaa 9083285  T
Q  481 tcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaa 549  Q
    ||||||        ||| | |||||| |||||||||||| |||||||||| ||||||||||||||||||    
T  9083284 tcccctaaaaaaggagaccgttggattacgaaggtctataagattttatagtgtatcaccaacacctaa 9083216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 374 - 570
Target Start/End: Original strand, 39349503 - 39349699
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||| |||||||||||||||||| |||||| | | ||||||| |||    
T  39349503 ttaacttatttcttttattcaatttggttccataactcttaactttctcaaacacgtcctttaacttatttcttttactcaatttggttcaatttttata 39349602  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
     ||||||||||||         || | || ||| ||| |||||||| |||||||||  || ||||||||||||||||||||||||||||||||||||    
T  39349603 attttaatcccctaaaaaaagtgaccgtttgattacggaggtctattagattttatcgtggatcaccaacacctaatttatttactttcttcttctt 39349699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 370 - 570
Target Start/End: Complemental strand, 39350744 - 39350544
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||||||||||| | |||| | |||||||||    
T  39350744 tcccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaacttatttcttttacttaatttggtccaatttt 39350645  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
     ||| ||||||||| ||        ||| | |||||| ||| ||||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |||    
T  39350644 tataattttaatcctctaaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaatttttttgctttattcatct 39350545  T
Q  570 t 570  Q
    |    
T  39350544 t 39350544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 386 - 593
Target Start/End: Original strand, 39164091 - 39164295
Alignment:
Q  386 ttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgatacttttaatcccc 485  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| | ||||||||||||| ||||||| |||    
T  39164091 ttttattcaatttagtctcataagtcttaactttatcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgata-ttttaat-ccc 39164188  T
Q  486 tnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattca 585  Q
    |        |||   ||| || ||| ||| |||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  39164189 ttaaaaaaaagactgttgaattacggaggcctatcaaattttatagtgtatcaccaacacctaatttatttacttttttcttcttttt-cctcatcttca 39164287  T
Q  586 tctacatt 593  Q
    ||||||||    
T  39164288 tctacatt 39164295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 374 - 570
Target Start/End: Complemental strand, 12373816 - 12373616
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||| | |||||||||||||    
T  12373816 ttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaacttatttattttattcaatttggtccaattttgata 12373717  T
Q  474 cttttaatc----ccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
     ||||||||                ||| | |||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  12373716 attttaatcaaaaaaaaaaaaaaacagaccgttggattacgaatgtctatcagattttacactgtatcaccaacacctaatttatttactttcttcttct 12373617  T
Q  570 t 570  Q
    |    
T  12373616 t 12373616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 372 - 553
Target Start/End: Original strand, 9082000 - 9082181
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttga 471  Q
    |||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||||  |||||||||||||||||||||||| | |||||||||||    
T  9082000 ccttaactcatttcttttattcaatttgattccataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttga 9082099  T
Q  472 tacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaattta 553  Q
    || ||||||||||||        ||| | |||||| ||| | ||||||||||||||||| | |||| | |||||||||||||    
T  9082100 taattttaatcccctagaaaatgagaccgttggatcacggatgtctatcagattttatagtatatcgctaacacctaattta 9082181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 370 - 588
Target Start/End: Original strand, 13276838 - 13277048
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||||||||  |||| |||||| |||||||||||||||  |||||||||||||||||||||||| | || ||||||    
T  13276838 tcccttaacttatttcttttattcaatttggtcctataaatcttaattttctcaaacacgtcccttaacttatttcttttattcaatttggtcaaatttt 13276937  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| |||||||||| |        ||| | |||||| ||| |||| ||||| ||||||        |||||||||||||||||||||||||||||| ||    
T  13276938 gataattttaatcccttaaaaaaaaagaccgttggattacggaggtgtatcacatttta--------caccaacacctaatttatttactttcttctcct 13277029  T
Q  570 ttttccctcatattcatct 588  Q
    | ||||  ||| |||||||    
T  13277030 tcttccaccatcttcatct 13277048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 370 - 457
Target Start/End: Original strand, 8447096 - 8447183
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaatt 457  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  8447096 tcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttcttttattcaatt 8447183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 429 - 601
Target Start/End: Original strand, 4031899 - 4032073
Alignment:
Q  429 gtcatttaacttatttcttttattcaattcgatccaattttgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagatttta 528  Q
    |||| ||||||||||||||||||||||||   ||||||||||||| ||||||||| ||        ||| | ||| || ||| | ||||| |||||||||    
T  4031899 gtcacttaacttatttcttttattcaatttagtccaattttgataattttaatccactaaaaaaagagaccgttgaattacggaagtctaccagatttta 4031998  T
Q  529 taatgtatcaccaacacctaatttat--ttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    || |||||||||||||||||||||||  |||||||||||||||| |||| |||| ||||||||||||||||||||    
T  4031999 tagtgtatcaccaacacctaatttatatttactttcttcttcttcttccttcatcttcatctacattcatccttc 4032073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 289 - 402
Target Start/End: Complemental strand, 18655772 - 18655659
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||||||| |||||||||        ||||||||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||    
T  18655772 taggcttaattgatctgccggttccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtcccttaatttatttcttt 18655673  T
Q  389 tattcaatttggtc 402  Q
    ||||||||||||||    
T  18655672 tattcaatttggtc 18655659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 8447077 - 8447185
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    |||||||||||||| |||||  |||||||||        ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8447077 ggcttaattgatctaccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttctttta 8447176  T
Q  391 ttcaatttg 399  Q
    |||||||||    
T  8447177 ttcaatttg 8447185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 9083414 - 9083303
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||||||||| | |        ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| |||||    
T  9083414 ggcttaattgatctgccggtttcttaattcatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaacttttttatttta 9083315  T
Q  391 ttcaatttggtc 402  Q
    ||||||||||||    
T  9083314 ttcaatttggtc 9083303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 287 - 402
Target Start/End: Original strand, 13276815 - 13276930
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  |||||||||        |||||||||||||| |||| | |||| |||||||||||| |||||||||||||||||    
T  13276815 tttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataaatcttaattttctcaaacacgtcccttaacttatttct 13276914  T
Q  387 tttattcaatttggtc 402  Q
    ||||||||||||||||    
T  13276915 tttattcaatttggtc 13276930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 370 - 452
Target Start/End: Original strand, 6801993 - 6802075
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttatt 452  Q
    |||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  6801993 tcccttaacttatttcttttttttaatttggtctcataagtcttaattttctcaaacacgtcccttaacttatttcttttatt 6802075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 9081977 - 9082090
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    |||||||||||||||| |||||| ||||||| |        |||||||||| | |||||||| ||||||||||||||||| |||||||||||||||||||    
T  9081977 taggcttaattgatctaccggttccttaactcatttcttttattcaatttgattccataagtcttaactttctcaaacacgtcccttaacttatttcttt 9082076  T
Q  389 tattcaatttggtc 402  Q
    ||||||||||||||    
T  9082077 tattcaatttggtc 9082090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 12372310 - 12372422
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| || |||||||||||| |    
T  12372310 tttaggcttaattgatctgccggtcccttaacttatttgttttattcaatttggtctcataagtcttaactttctcaaacacgtctcttaacttatttgt 12372409  T
Q  387 tttattcaatttg 399  Q
    |||||||||||||    
T  12372410 tttattcaatttg 12372422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 290 - 392
Target Start/End: Original strand, 18654295 - 18654397
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||  ||||| |||        ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  18654295 aggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaacttatttctttt 18654394  T
Q  390 att 392  Q
    |||    
T  18654395 att 18654397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 288 - 402
Target Start/End: Complemental strand, 19230194 - 19230080
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    ||||||||||||||||||||| |  ||||| |||        |||||||||||||| |||||| ||||||||||||||||| |||||||||| |||||||    
T  19230194 ttaggcttaattgatctgccgatcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttctt 19230095  T
Q  388 ttattcaatttggtc 402  Q
    |||||||||||||||    
T  19230094 ttattcaatttggtc 19230080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 12373800 - 12373728
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  12373800 attcaatttagtcccataagtcttaactttctcaaacacgtcccttaacttatttattttattcaatttggtc 12373728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 39350764 - 39350652
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    ||||||||||||| |||||||  |||||||||        ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  39350764 aggcttaattgatatgccggtcccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaacttatttctttt 39350665  T
Q  390 attcaatttggtc 402  Q
    | | |||||||||    
T  39350664 acttaatttggtc 39350652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 293 - 402
Target Start/End: Original strand, 19228840 - 19228949
Alignment:
Q  293 cttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttatt 392  Q
    ||||||||||||||||||  ||||| |||        |||||||||||||| |||||| ||||||||||||||||| | |||||||| ||||||||||||    
T  19228840 cttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgttccttaactgatttcttttatt 19228939  T
Q  393 caatttggtc 402  Q
    ||||||||||    
T  19228940 caatttggtc 19228949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 433 - 570
Target Start/End: Complemental strand, 4033061 - 4032924
Alignment:
Q  433 tttaacttatttcttttattcaattcgatccaattttgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataat 532  Q
    |||||||||||| ||||||| || | | ||||||||| ||| ||||||||| ||        ||| | |||||| ||| |||||||||||||||||||||    
T  4033061 tttaacttattttttttatttaacttggtccaattttaataattttaatccactaaaaaaagagaccgttggattacggaggtctatcagattttataat 4032962  T
Q  533 gtatcaccaacacctaatttatttactttcttcttctt 570  Q
    ||||||  |||||||| |||||||||||||||||||||    
T  4032961 gtatcattaacacctagtttatttactttcttcttctt 4032924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 39164095 - 39164167
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||| ||| ||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  39164095 attcaatttagtctcataagtcttaactttatcaaacacgtcccttaacttatttcttttattcaatttggtc 39164167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 374 - 441
Target Start/End: Complemental strand, 35952531 - 35952464
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaactta 441  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||  ||||||||    
T  35952531 ttaacttatttcttttattcaatttggtctcataaatcttaactttgtcaaacgcgtcccttaactta 35952464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 330 - 401
Target Start/End: Original strand, 39349519 - 39349590
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggt 401  Q
    |||||||||||| |||||| | ||||||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  39349519 attcaatttggttccataactcttaactttctcaaacacgtcctttaacttatttcttttactcaatttggt 39349590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 13278310 - 13278241
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||    
T  13278310 attcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttttttacttcaatttg 13278241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 6802017 - 6802075
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttatt 392  Q
    ||||||||| ||||||| |||| |||||||||||| |||||||||||||||||||||||    
T  6802017 aatttggtctcataagtcttaattttctcaaacacgtcccttaacttatttcttttatt 6802075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 541 - 601
Target Start/End: Original strand, 6802406 - 6802465
Alignment:
Q  541 aacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    |||||||||||||||||||||||||||||| ||||| ||| || |||||||||||||||||    
T  6802406 aacacctaatttatttactttcttcttcttcttccc-catctttatctacattcatccttc 6802465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 6803699 - 6803631
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||| ||||||| |||| |||||||||||  |  ||||||||||||||||||||||||||||||    
T  6803699 aatttggtcacataagtcttaattttctcaaacatgtttcttaacttatttcttttattcaatttggtc 6803631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 374 - 426
Target Start/End: Original strand, 25001665 - 25001717
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaac 426  Q
    |||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  25001665 ttaacttatttcttttattcaatttgatttcataagtcttaactttcgcaaac 25001717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 30213403 - 30213498
Alignment:
Q  79 gaaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaatttttgtgttaaaatacaatagcggatccgaatccgctacccgc 174  Q
    ||||||||||||||||||| ||||| ||||| ||| |||||||||| ||| |||||  ||||||||   ||||| |||||  |||||||| |||||    
T  30213403 gaaatccccaaaatgcccttaaaatggttttaaaattagggtcaatgtgggattttcctgttaaaacctaatagtggatcaaaatccgctgcccgc 30213498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 40172584 - 40172692
Alignment:
Q  59 gaaaatgttaaggttaatttgaaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaa---tttttgtgttaaaatacaatagcgg 155  Q
    ||||| ||||||||||||| ||||| ||||||||||||   ||| |||||  ||| |||||||||||||| |   ||||| |||| ||||||||||| ||    
T  40172584 gaaaaggttaaggttaattcgaaattcccaaaatgcccatgaaacagtttaaaaattagggtcaatttgggatcttttttatgtttaaatacaatagggg 40172683  T
Q  156 atccgaatc 164  Q
    ||| |||||    
T  40172684 atcagaatc 40172692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 588
Target Start/End: Complemental strand, 30674771 - 30674712
Alignment:
Q  531 atgtatcaccaacacctaatttattt-acttt-cttcttctttttccctcatattcatct 588  Q
    |||||||||||||||||||||||||| ||||| |||| |||| ||||||||| |||||||    
T  30674771 atgtatcaccaacacctaatttatttcactttccttcctcttcttccctcatcttcatct 30674712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 575
Target Start/End: Complemental strand, 38603721 - 38603646
Alignment:
Q  501 ttggataacgaaggtctatcagattttataatgtatcaccaacacctaatttat-ttactttcttcttctttttcc 575  Q
    |||||||| ||||||| ||||||| | ||| |||||||||||||||| |||||| | ||||||||| |||| ||||    
T  38603721 ttggataaagaaggtccatcagatctaatagtgtatcaccaacacctcatttatatcactttcttcatcttcttcc 38603646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 588
Target Start/End: Original strand, 14356607 - 14356664
Alignment:
Q  532 tgtatcaccaacacctaattta-tttactttcttcttctttttccctcatattcatct 588  Q
    |||||||||||||||| ||||| |||||||||||| |||| || |||||| |||||||    
T  14356607 tgtatcaccaacacctgatttattttactttcttcatcttctttcctcatcttcatct 14356664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 1e-74; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 374 - 601
Target Start/End: Original strand, 34995375 - 34995601
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||    
T  34995375 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtc-tttaacttatttcttttattcaatttggtccaattttaata 34995473  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttcttttt 573  Q
     ||||||||||||        ||| | || ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||    
T  34995474 attttaatcccctaaaaaaacagaccgttagattacgaaggtctatcagattttatagtgtatcaccaacatctaatttatttactttcttcttcttctt 34995573  T
Q  574 ccctcatattcatctacattcatccttc 601  Q
    ||||||| ||||||| ||||||||||||    
T  34995574 ccctcatcttcatctgcattcatccttc 34995601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 32349136 - 32348908
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||| ||||||||||||||||| | |||||||||    
T  32349136 tcccttaatttatttcttttattcaatttggtcttataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaatttt 32349037  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||| | |||||| ||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||     
T  32349036 gataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttcttc- 32348938  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
      |||| |||| ||||||| ||||||||||||    
T  32348937 --ttccatcatcttcatcttcattcatccttc 32348908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 370 - 600
Target Start/End: Complemental strand, 34996860 - 34996633
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||  |||||||||||||||||||||||| | |||||||||    
T  34996860 tccctgaacttatttcttttattcaatttagtcccataagtcttaactttctcaaatacgtcccttaacttatttcttttattcaatttggtccaatttt 34996761  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| |||||||| |||        ||| | |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  34996760 gataattttaatctcctaaaaaaacagaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttc- 34996662  T
Q  570 ttttccctcatattcatctacattcatcctt 600  Q
      ||||||||| ||||||||| ||| |||||    
T  34996661 --ttccctcatcttcatctaccttcttcctt 34996633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 370 - 600
Target Start/End: Complemental strand, 3000892 - 3000668
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||   |||||||||    
T  3000892 tcccttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaacacctcccttaacttatttcttttattcaatttagtccaatttt 3000793  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||||| |||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||        
T  3000792 gataattttaatcccctaaaaacacagatcgttggattacgaaggtctatcagattttatagtgtatcactaacacctaatttatttactttcttc---- 3000697  T
Q  570 ttttccctcatattcatctacattcatcctt 600  Q
      |||| |||| |||||||||||||||||||    
T  3000696 --ttccatcatcttcatctacattcatcctt 3000668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 11801441 - 11801210
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||| ||||||||||||||||| | |||||||||    
T  11801441 tcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaatttt 11801342  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||| | |||||| ||| |||||||||| |||||||| |||||||  |||||||||||||||||||||||| ||||    
T  11801341 gataattttaatcccctcaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcattaacacctaatttatttactttcttattct 11801242  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | |||| |||| ||||||| ||||||||||||    
T  11801241 tcttccatcatcttcatctccattcatccttc 11801210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 32712374 - 32712602
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||| |||||||  |||| |||||  ||||||||| |||||  |||||||||||||||||||||||| | |||||||||    
T  32712374 tcccttaacttatttcttttattcagtttggtcctataaatcttacatttctcaaatacgtctcttaacttatttcttttattcaatttggtccaatttt 32712473  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||| | |||||| ||| |||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||||     
T  32712474 gataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtaccaccaacacctaacttatttactttcttcttc- 32712572  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
      ||||||||| ||||||||||||||||||||    
T  32712573 --ttccctcatcttcatctacattcatccttc 32712602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 372 - 580
Target Start/End: Original strand, 32347829 - 32348037
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttga 471  Q
    |||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||| | ||||||||||||||||| | |||||||||||    
T  32347829 ccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaagtgatttcttttattcaatttggtccaattttga 32347928  T
Q  472 tacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttcttt 571  Q
    || ||||||||||||        ||| | |||||| |||  |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||     
T  32347929 taattttaatcccctaaaaaaagagaacgttggattacgggggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttcttcttc 32348028  T
Q  572 ttccctcat 580  Q
    |||| ||||    
T  32348029 ttccatcat 32348037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 375 - 570
Target Start/End: Complemental strand, 32713977 - 32713782
Alignment:
Q  375 taacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgatac 474  Q
    |||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||||  |||||||||||||||||||||||| | |||||||||||||     
T  32713977 taacttatttcttttattcagtttggttccataaatcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgataa 32713878  T
Q  475 ttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
    ||||||||||||         || | |||||| ||| |||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||    
T  32713877 ttttaatcccctaaaaaaagtgaccgttggattacggaggtctataagattttacagtgtatcaccaacacctaatttatttactttcttcttctt 32713782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 374 - 570
Target Start/End: Original strand, 18572908 - 18573103
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||  |||||||||||||||||||||| | |  ||||||||||||    
T  18572908 ttaacttatttcttttattcaatttggtcccataagtcttaactttcttaaaaacgtcccttaacttatttcttttattcaaattgggccaattttgata 18573007  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
     ||||||||||||        | |   |||||| ||| |||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||||    
T  18573008 attttaatcccctaaaaaag-acactgttggattacggaggtctatcaaattttacagtgtatcaccaacacataatttatttactttcttcttctt 18573103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 370 - 568
Target Start/End: Complemental strand, 19383246 - 19383056
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaactta--tttcttttattcaattcgatccaatt 467  Q
    ||||||||||||||||||||||||||||       |||||||||||||||||||||||||||  ||||||||  ||| |||||||||||| |||| ||||    
T  19383246 tcccttaacttatttcttttattcaatt-------ataagtcttaactttctcaaacacgtcccttaacttattttttttttattcaatttgatctaatt 19383154  T
Q  468 ttgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttctt 567  Q
    |||||| ||||||| ||||        ||| | |||||| |||| |||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  19383153 ttgataattttaatgccctaaaaag--agaccgttggattacgatggtctatcagattttatagtgtatca-caacatctaatttatttactttcttctt 19383057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 369 - 486
Target Start/End: Complemental strand, 29479294 - 29479177
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattt 468  Q
    ||||||||| |||||||||||||||||| ||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||||||| | ||||||||    
T  29479294 atcccttaaattatttcttttattcaatctggtcccataagttttaactttctcaatcacgtcctttaacttatttcttttattcaatttggtccaattt 29479195  T
Q  469 tgatacttttaatcccct 486  Q
    | ||| ||| ||||||||    
T  29479194 taataatttcaatcccct 29479177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 289 - 402
Target Start/End: Complemental strand, 11801462 - 11801349
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||||||  ||||| |||        |||||||||||||| |||||| ||||||||||||||||| |||||||||| ||||||||    
T  11801462 taggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttt 11801363  T
Q  389 tattcaatttggtc 402  Q
    ||||||||||||||    
T  11801362 tattcaatttggtc 11801349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 370 - 457
Target Start/End: Complemental strand, 18574392 - 18574305
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaatt 457  Q
    |||||| |||||||||||||||||||||||||  ||||||||||||||||||||| ||||||  | ||||||||||||||||||||||    
T  18574392 tcccttgacttatttcttttattcaatttggttccataagtcttaactttctcaagcacgtccctgaacttatttcttttattcaatt 18574305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 330 - 398
Target Start/End: Complemental strand, 3000872 - 3000804
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaattt 398  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||    
T  3000872 attcaatttggtcccataaatcttaactttctcaaacacctcccttaacttatttcttttattcaattt 3000804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 286 - 402
Target Start/End: Complemental strand, 18574416 - 18574300
Alignment:
Q  286 atttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttc 385  Q
    |||| ||||||||||||||||||||  ||| |||||        |||||||||||| |||||||| ||||||||||||| ||| ||||| ||||||||||    
T  18574416 attttggcttaattgatctgccggtcccttgacttatttcttttattcaatttggttccataagtcttaactttctcaagcacgtccctgaacttatttc 18574317  T
Q  386 ttttattcaatttggtc 402  Q
    |||||||||||||||||    
T  18574316 ttttattcaatttggtc 18574300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 29479273 - 29479201
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  29479273 attcaatctggtcccataagttttaactttctcaatcacgtcctttaacttatttcttttattcaatttggtc 29479201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 32349156 - 32349044
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||  ||||| |||        |||||||||||||  |||||| ||||||||||||||||| |||||||||| |||||||||    
T  32349156 aggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcttataagtcttaactttctcaaacacgtcccttaactgatttctttt 32349057  T
Q  390 attcaatttggtc 402  Q
    |||||||||||||    
T  32349056 attcaatttggtc 32349044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 34996840 - 34996768
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||| ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||    
T  34996840 attcaatttagtcccataagtcttaactttctcaaatacgtcccttaacttatttcttttattcaatttggtc 34996768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 290 - 400
Target Start/End: Original strand, 18572884 - 18572994
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||   ||||||||        ||||||||||||||||||||| |||||||||| ||| || ||||||||||||||||||||    
T  18572884 aggcttaattgatctgccggtccgttaacttatttcttttattcaatttggtcccataagtcttaactttcttaaaaacgtcccttaacttatttctttt 18572983  T
Q  390 attcaatttgg 400  Q
    |||||| ||||    
T  18572984 attcaaattgg 18572994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 512 - 601
Target Start/End: Complemental strand, 18574270 - 18574181
Alignment:
Q  512 aggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    ||||||||||||||||||| |||| ||||||||||  |||||||||||||||||||||| |||||||||  |||||| |||||| |||||    
T  18574270 aggtctatcagattttatagtgtaccaccaacaccggatttatttactttcttcttcttcttccctcatcctcatcttcattcaaccttc 18574181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 32347806 - 32347919
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    |||||||||||||||||| |||| ||||| |||        |||||||||||||  |||||| ||||||||||||||||| |||||||| | ||||||||    
T  32347806 taggcttaattgatctgctggttccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaagtgatttcttt 32347905  T
Q  389 tattcaatttggtc 402  Q
    ||||||||||||||    
T  32347906 tattcaatttggtc 32347919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 32713962 - 32713890
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||| |||||| |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32713962 attcagtttggttccataaatcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtc 32713890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 501 - 593
Target Start/End: Complemental strand, 21095347 - 21095255
Alignment:
Q  501 ttggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacatt 593  Q
    |||||| ||| ||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||  ||| ||||||| ||||    
T  21095347 ttggattacggaggtctaccagattttatagtgtatcaccaacacctaatttatttactttattcttattcttcctccatcttcatcttcatt 21095255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 34995391 - 34995462
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||| ||||||| ||||||||||||||||| | | |||||||||||||||||||||||||||||    
T  34995391 attcaatttggtctcataagtcttaactttctcaaacacgt-ctttaacttatttcttttattcaatttggtc 34995462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 29477778 - 29477827
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaacttt 419  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29477778 tcccttaacttatttcttttattcaatttggtctcataaatcttaacttt 29477827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 452 - 561
Target Start/End: Original strand, 21094506 - 21094615
Alignment:
Q  452 tcaattcgatccaattttgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatt 551  Q
    |||||| |||||||||||||||  |||||||||||        ||| | |||||| ||| |||||||  |||||||||| ||||||||||||||||||||    
T  21094506 tcaatttgatccaattttgataactttaatcccctaaaaaaagagaccgttggattacggaggtctactagattttatagtgtatcaccaacacctaatt 21094605  T
Q  552 tatttacttt 561  Q
    ||||||||||    
T  21094606 tatttacttt 21094615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 27719885 - 27719941
Alignment:
Q  501 ttggataacgaaggtctatcagattttataatgtatcaccaacacctaatttattta 557  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  27719885 ttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttattta 27719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 369 - 431
Target Start/End: Original strand, 19788265 - 19788327
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtc 431  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||||||||  |||||||||    
T  19788265 atcccttaacttgtttcttttattcaatttgatctcataagttttaactttcataaacacgtc 19788327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 495 - 601
Target Start/End: Original strand, 29477884 - 29477996
Alignment:
Q  495 agatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttct------tcttctttttccctcatattcatct 588  Q
    ||||| ||||||||   ||||||| ||||||||||  |||||||||||||||| |||||||||||||||      ||||||| ||||||||| |||||||    
T  29477884 agatcgttggataagtgaggtctaccagattttatggtgtatcaccaacacctgatttatttactttcttcctcctcttcttcttccctcatcttcatct 29477983  T
Q  589 acattcatccttc 601  Q
     |||||| |||||    
T  29477984 tcattcaaccttc 29477996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 502 - 601
Target Start/End: Complemental strand, 7629773 - 7629675
Alignment:
Q  502 tggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    ||||| |||||| | |||||||||||||| |||||| |||||| ||||||| |||||||| ||| |||||||||  ||| ||||||| |||||| |||||    
T  7629773 tggattacgaagatttatcagattttatagtgtatctccaacatctaattt-tttactttattcatctttttcctccatcttcatcttcattcaaccttc 7629675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 287 - 402
Target Start/End: Original strand, 32712351 - 32712466
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    |||||| |||||||||||| ||||  |||||||||        ||||| |||||||| |||| | |||  ||||||||| || || ||||||||||||||    
T  32712351 tttaggtttaattgatctgtcggtcccttaacttatttcttttattcagtttggtcctataaatcttacatttctcaaatacgtctcttaacttatttct 32712450  T
Q  387 tttattcaatttggtc 402  Q
    ||||||||||||||||    
T  32712451 tttattcaatttggtc 32712466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 495 - 570
Target Start/End: Original strand, 13561417 - 13561493
Alignment:
Q  495 agatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttat-ttactttcttcttctt 570  Q
    ||||| |||||||| ||||||| ||||||| | ||| ||||||||||||||||||||||| | ||||||||| ||||    
T  13561417 agatcgttggataaagaaggtccatcagatctaatagtgtatcaccaacacctaatttatatcactttcttcatctt 13561493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 369 - 431
Target Start/End: Original strand, 19761960 - 19762022
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtc 431  Q
    |||||||||||| |||||||||||||||||| ||| |||||| |||| ||||  |||||||||    
T  19761960 atcccttaacttgtttcttttattcaatttgatcttataagttttaattttcataaacacgtc 19762022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 19383218 - 19383162
Alignment:
Q  345 ataagttttaactttctcaaacacatcccttaactta--tttcttttattcaatttg 399  Q
    |||||| ||||||||||||||||| ||||||||||||  ||| ||||||||||||||    
T  19383218 ataagtcttaactttctcaaacacgtcccttaacttattttttttttattcaatttg 19383162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 5e-74; HSPs: 94)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 370 - 600
Target Start/End: Complemental strand, 18788659 - 18788429
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| |||||||||||||||||| |||||  |||| |||||||||||||||||| |||  |||||||||||||||||||||||| | |||||||||    
T  18788659 tcccttaatttatttcttttattcaatatggtcctataaatcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtccaatttt 18788560  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||| ||       |||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18788559 gataattttaatcctctaaaaaaatagaccgttggattacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 18788460  T
Q  570 ttttccctcatattcatctacattcatcctt 600  Q
     |||||||||| |||||||||||||||||||    
T  18788459 ctttccctcatcttcatctacattcatcctt 18788429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 43113693 - 43113924
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| | |||||||||    
T  43113693 tcccttaacttatttcttttattcaatttggtctcataagttttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaatttt 43113792  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||| | |||||| ||  ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  43113793 gataattttaatcccctaaaaaaagagaccgttggattacagaggtctatcagattttatagtgtatcaccagcacctaatttatttgctttcttcttct 43113892  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | |||| |||| ||||||| ||||||||||||    
T  43113893 tcttccatcatcttcatcttcattcatccttc 43113924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 330 - 601
Target Start/End: Original strand, 12630542 - 12630814
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacg 429  Q
    ||||||||||||| ||||||| ||||||||||||||||  | ||||||||||| |||||| ||||||||||||||| ||||||||| |||||||||||||    
T  12630542 attcaatttggtctcataagtcttaactttctcaaacatgttccttaacttatgtcttttcttcaatttggtctcaaaagtcttaattttctcaaacacg 12630641  T
Q  430 tcatttaa-cttatttcttttattcaattcgatccaattttgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagatttta 528  Q
    ||  |||| ||| ||| |||||||||||| | || |||||||||| ||||||||||||        |||   |||||| ||  |||| ||||||||||||    
T  12630642 tcccttaacctttttttttttattcaatttggtctaattttgataattttaatcccctagaaaaagagactgttggattacagaggtatatcagatttta 12630741  T
Q  529 taatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    | ||| ||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  12630742 ttatggatcactaacacctaatttatttactttcttcttcttcttccctcatcttcatctacattcatccttc 12630814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 29186683 - 29186914
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||| |||||||||||| | | |||||||    
T  29186683 tcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttattttattcaatttggttcaatttt 29186782  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| |||||||||| |        ||| | | |||| ||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |    
T  29186783 gataattttaatcccttaaaaaatgagaccgtaggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttattttcttctttt 29186882  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | ||||||||| ||||||||||||||| ||||    
T  29186883 tcttccctcatcttcatctacattcattcttc 29186914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 370 - 570
Target Start/End: Original strand, 19217646 - 19217846
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| | | |||||||    
T  19217646 tcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccattaacttatttcttttattcaatttggtacaatttt 19217745  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||| ||||        ||| | |||||| ||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19217746 gataattttaataccctaaaaaaagagaccgttggattacggaggtctatcggattttatagtgtatcaccaacacctaatttatttactttcttcttct 19217845  T
Q  570 t 570  Q
    |    
T  19217846 t 19217846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 18787167 - 18787398
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| ||||||||||| || ||||||||| ||||| |||||||||| ||||| | |||  |||||||||||||||||||||||| | |||||||||    
T  18787167 tcccttaatttatttcttttgtttaatttggtcccataaatcttaactttttcaaatatgtcccttaacttatttcttttattcaatttggtccaatttt 18787266  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||       |||| | |||||| ||| |||| |||||||||||||  |||||||||||||| |||||||||||||||||||||||    
T  18787267 gataattttaatcccctaaaaaaatagaccgttggattacggaggtttatcagattttatggtgtatcaccaacacttaatttatttactttcttcttct 18787366  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | ||||||||||||||||||||| ||||||||    
T  18787367 tcttccctcatattcatctacatccatccttc 18787398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 370 - 580
Target Start/End: Complemental strand, 43962668 - 43962458
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||  |||||||||||||||||||||||| |||||||||||    
T  43962668 tcccttaacttatttcttttattcaatttggtcacataagtcttagctttctcaaacatgtcccttaacttatttcttttattcaatttgatccaatttt 43962569  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||  ||        ||| | |||||| ||||||||||||||||||||||| | |||||| |||||||||||||||| ||||||||||||    
T  43962568 gataattttaatcatctaaaaaaacagaccgttggattacgaaggtctatcagattttatagtatatcactaacacctaatttatttcctttcttcttct 43962469  T
Q  570 ttttccctcat 580  Q
    | |||||||||    
T  43962468 tcttccctcat 43962458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 45400109 - 45399878
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||| |||  ||  |||||||||||||| ||||||||||  ||||||||||  ||||||||||||||||||| | || | |||||||||    
T  45400109 tcccttaacttatttgtttattttgatttggtctcataactcttaacttttgcaaacacgtcccttaacttatttcttttatttactttggtccaatttt 45400010  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||| | |||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  45400009 gataattttaatcccctaaaaaaagagaccgttggattacgaaggtctatcagattttatagtgtatcactaacacctaatttatttactttcttcttct 45399910  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | |||| |||| ||||||||||||||||||||    
T  45399909 tcttccttcatcttcatctacattcatccttc 45399878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 369 - 570
Target Start/End: Complemental strand, 44420622 - 44420422
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattt 468  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||   ||||||||    
T  44420622 atcctttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttagtccaattt 44420523  T
Q  469 tgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
    ||||| ||||||| ||||        | | | |||||| |||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||    
T  44420522 tgataattttaatgccctaaaaaaagataccgttggattacgaaggtctatcaga-tttatagtgtatcaccaacatctaatttatttactttcttcttc 44420424  T
Q  569 tt 570  Q
    ||    
T  44420423 tt 44420422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 370 - 570
Target Start/End: Original strand, 44417476 - 44417676
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||  ||||||||||| |||| ||||||| | |||||||||    
T  44417476 tcccttaacttatttcttttattcaatttggttccataagtcttaacattctcaaacacgtcccttaacttatttattttcttcaatttggtccaatttt 44417575  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||||  |||||| ||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  44417576 gataattttaatcccctaaaaaaagagattgttggattacggaggtctatcagattttatagtctatcaccaacacctaatttatttactttcttcttct 44417675  T
Q  570 t 570  Q
    |    
T  44417676 t 44417676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 370 - 570
Target Start/End: Complemental strand, 48793615 - 48793415
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  48793615 tcccttaacttatttcttttattcattttggtcccataagtcttaactttttcaaacacgtcccttaacttatttcttttattcaatttgatccaatttt 48793516  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| |||||||| |||        ||| | |||||| || ||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  48793515 gataattttaatctcctaaaaaaagagaccgttggattacaaaggtgtataagattttatagtgtatcaccaacaccaaatttatttactttcttcttct 48793416  T
Q  570 t 570  Q
    |    
T  48793415 t 48793415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 370 - 570
Target Start/End: Complemental strand, 13750735 - 13750535
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||  |||||||||||||||||||||||| | |||||||||    
T  13750735 tcccttaacttatttcttttattcaatttgatcacataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaatttt 13750636  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||| | |||||| |||||||||||| |||||||||| ||||||| || || ||||||||| ||||||| ||||||    
T  13750635 gataattttaatcccctaaaaaaacagaccgttggattacgaaggtctattagattttatagtgtatcatcatcaactaatttatatactttcgtcttct 13750536  T
Q  570 t 570  Q
    |    
T  13750535 t 13750535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 370 - 586
Target Start/End: Original strand, 9391538 - 9391754
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||||||||  |||| |||||| |||||||||||||||  || ||||||||||||||||||||| | | |||||||    
T  9391538 tcccttaacttatttcttttattcaatttggtcctataaatcttaattttctcaaacacgtcccttcacttatttcttttattcaatttggtacaatttt 9391637  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| |||||||||  |        ||| | |||||| ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  9391638 gataattttaatcctttaaaaaaagagaccgttggattacgaaggtctatcagattttatagtgtatcatcaacaccaaatttatttactttcttcttct 9391737  T
Q  570 ttttccctcatattcat 586  Q
    | |||| |||| |||||    
T  9391738 tcttccatcatcttcat 9391754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 374 - 570
Target Start/End: Complemental strand, 29188125 - 29187929
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||| |||||| ||||||||||||   |||||||||||||    
T  29188125 ttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaatttatttattttattcaatttagtccaattttgata 29188026  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
     ||||||||||||        ||| | ||||||  |  ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  29188025 attttaatcccctaaaaaaagagaccgttggattgcagaggtctatcagattttatagtgcatcaccaacacctaatttatttactttcttcttctt 29187929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 374 - 601
Target Start/End: Complemental strand, 9392910 - 9392677
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    ||||||||||||||||||| |||||  ||  ||||||||||||||||||||||| |||  |||||||||||||||||||||||| | |||||||||||||    
T  9392910 ttaacttatttcttttatttaatttattcctataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtccaattttgata 9392811  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttact------ttcttctt 567  Q
     ||||||||||||        ||| | |||||| ||  ||||||||||||||||||| |||||||||  |||||||||||||||||      ||||||||    
T  9392810 attttaatcccctagaaaaagagaccgttggattacagaggtctatcagattttatagtgtatcaccggcacctaatttatttactttcttcttcttctt 9392711  T
Q  568 ctttttccctcatattcatctacattcatccttc 601  Q
    ||| ||||||||| ||||||||||||||||||||    
T  9392710 cttcttccctcatcttcatctacattcatccttc 9392677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 369 - 586
Target Start/End: Original strand, 13597162 - 13597378
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattt 468  Q
    |||| ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||  | ||||||||||||||||| |||| ||| ||||||    
T  13597162 atcctttaacgtatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtccctgaacttatttcttttattaaatttgat-caattt 13597260  T
Q  469 tgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
    ||||| ||||||||| ||        | ||| |||||| | | |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  13597261 tgataattttaatcctctaaaaaaagatatcgttggattagggaggtctataagattttatagtgtatcaccaacacctaatttatttactttcttcttc 13597360  T
Q  569 tttttccctcatattcat 586  Q
    || |||| |||| |||||    
T  13597361 ttcttccatcatcttcat 13597378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 37237324 - 37237096
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||| ||  |||||||||||  |||||| |||| | |||||||||    
T  37237324 tcccttaatttatttcttttatttaatttggtctcataagtcttaactctctcaaacacatcccttaacttattt--tttattaaatttggtccaatttt 37237227  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||| ||||| ||        ||||| |||||| ||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||     
T  37237226 gataattt-aatcctctaaaaaaagagatcgttggattacggaggtctatcagattttatagtgtatgaccaacacctaatttatttactttcttcatca 37237128  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | |||| |||| ||||||| ||||||||||||    
T  37237127 tcttccatcatcttcatcttcattcatccttc 37237096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 370 - 588
Target Start/End: Original strand, 7011652 - 7011871
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||  ||| |||||||||||||||||||| | |||||||||    
T  7011652 tcccttaacttatttcttttattcaatttgatctcataagtcttaactttatcaaacatgtcccttagcttatttcttttattcaatttggtccaatttt 7011751  T
Q  470 gatacttttaatcccct-nnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
    |||| |||||||||  |         ||| | |||||| ||| |||||||| |||||||||| |||||||||||||||||||||||||||||| ||| ||    
T  7011752 gataattttaatccattaaaaaaaaaagaccgttggattacggaggtctataagattttatagtgtatcaccaacacctaatttatttactttattcatc 7011851  T
Q  569 tttttccctcatattcatct 588  Q
    || ||| ||||| |||||||    
T  7011852 ttcttctctcatcttcatct 7011871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 370 - 588
Target Start/End: Original strand, 7027010 - 7027229
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||  ||| |||||||||||||||||||| | |||||||||    
T  7027010 tcccttaacttatttcttttattcaatttgatctcataagtcttaactttatcaaacatgtcccttagcttatttcttttattcaatttggtccaatttt 7027109  T
Q  470 gatacttttaatcccct-nnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
    |||| |||||||||  |         ||| | |||||| ||| |||||||| |||||||||| |||||||||||||||||||||||||||||| ||| ||    
T  7027110 gataattttaatccattaaaaaaaaaagaccgttggattacggaggtctataagattttatagtgtatcaccaacacctaatttatttactttattcatc 7027209  T
Q  569 tttttccctcatattcatct 588  Q
    || ||| ||||| |||||||    
T  7027210 ttcttctctcatcttcatct 7027229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 370 - 567
Target Start/End: Original strand, 48792462 - 48792659
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||  |||||||||||||||||||||||| |||| ||||||    
T  48792462 tcccttaacttatttcttttattcaatttggtcccataagttttaactttttcaaacatgtcccttaacttatttcttttattcaatttgatctaatttt 48792561  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttctt 567  Q
    |||| |||||||| |||        ||| | |||||| || | ||| ||| |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  48792562 gataattttaatctcctaaaaaaagagaccgttggattacaagggtgtataagattttatagtgtatcaccaacaccaaatttatttactttcttctt 48792659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 370 - 600
Target Start/End: Original strand, 43960964 - 43961179
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||||| |            |||||||||||||  |||| ||||||||||||||||||| |||||||||||    
T  43960964 tcccttaacttatttcttttattcaatttggtctcgt------------tctcaaacacgtcccttaatttatttcttttattcaatttgatccaatttt 43961051  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||| ||        ||| | |||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||     
T  43961052 gataattttaatcctctacaaaaacagaccgttggattacaaaggtctatcagattttatagtgtatcactaacacctaatttatttactttcttcttc- 43961150  T
Q  570 ttttccctcatattcatctacattcatcctt 600  Q
      ||||||||| |||||||||| ||||||||    
T  43961151 --ttccctcatcttcatctacactcatcctt 43961179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 370 - 588
Target Start/End: Complemental strand, 27072753 - 27072535
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| ||||||||||||||||||||| || |||||||||||||||||||||||| |||  |||||||||||||||||||||||| | || ||||||    
T  27072753 tcccttaatttatttcttttattcaatttgatcccataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtcaaatttt 27072654  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||| ||        | | | |||||| ||  |||||||| |||||||||| | |||||||||||||||||||||||||||| ||| |||    
T  27072653 gataattttaatccactaaaaaaaaaaaccgttggattacagaggtctataagattttatagtttatcaccaacacctaatttatttactttattcatct 27072554  T
Q  570 ttttccctcatattcatct 588  Q
    | ||| || || |||||||    
T  27072553 tcttctcttatcttcatct 27072535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 370 - 588
Target Start/End: Original strand, 27205560 - 27205778
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| ||||||||||||||||||||| || |||||||||||||||||||||||| |||  |||||||||||||||||||||||| | || ||||||    
T  27205560 tcccttaatttatttcttttattcaatttgatcccataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtcaaatttt 27205659  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||| ||        | | | |||||| ||  |||||||| |||||||||| | |||||||||||||||||||||||||||| ||| |||    
T  27205660 gataattttaatccactaaaaaaaaaaaccgttggattacagaggtctataagattttatagtctatcaccaacacctaatttatttactttattcatct 27205759  T
Q  570 ttttccctcatattcatct 588  Q
    | ||| || || |||||||    
T  27205760 tcttctcttatcttcatct 27205778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 370 - 567
Target Start/End: Original strand, 3537445 - 3537641
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||||||||||||||||   || ||||||    
T  3537445 tcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttcttttattcaatttagtctaatttt 3537544  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttctt 567  Q
     ||| ||||||||||||        | | | |||||| |||||||||||| | |||||||| | |||||||| |||||||||| ||||||||||||||    
T  3537545 aataattttaatcccctaaaaaaagaaaccgttggattacgaaggtctataaaattttatagtatatcaccatcacctaattt-tttactttcttctt 3537641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 370 - 457
Target Start/End: Complemental strand, 3538662 - 3538575
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaatt 457  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  3538662 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcttttcacttatttcttttattcaatt 3538575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 32518440 - 32518663
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||  |||| ||||||||||||||||||| | | |||        
T  32518440 tcccttaatttatttcttttattcaatttggtcccataaatcttaactttctcaaacacgtcccttaaattatttcttttattcaatttggttcaa---- 32518535  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttact-ttcttcttc 568  Q
         ||||||||||||        ||| | |||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||  ||  ||||| ||    
T  32518536 -----ttttaatcccctaaaaaaaaagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttattccctcatcttcatc 32518630  T
Q  569 tttttccctcatattcatctacattcatccttc 601  Q
    || |||||| || ||||||| ||||||||||||    
T  32518631 ttcttccctaatcttcatcttcattcatccttc 32518663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 370 - 560
Target Start/End: Complemental strand, 32519848 - 32519658
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||| ||  |||| ||||||||||||||||||| | | |||||||    
T  32519848 tcccttaatttatttcttttattcaatttggtcccataaatcttaactttctcaaacacatcccttaaattatttcttttattcaatttggttcaatttt 32519749  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactt 560  Q
     ||| |||||||||| |        ||| | ||| || ||||||||||| |||||| |||| ||| ||||||||||||||||| |||||||    
T  32519748 aataattttaatcccttaaaaaaagagaccgttgaattacgaaggtctaccagattgtatagtgtgtcaccaacacctaatttttttactt 32519658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 373 - 556
Target Start/End: Original strand, 44746748 - 44746931
Alignment:
Q  373 cttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgat 472  Q
    |||||||||||| |||||||||||||| ||| ||||||||||| ||||||||||| ||   |||||||||||||||||||||||| | || |||||||||    
T  44746748 cttaacttattttttttattcaatttgatcttataagtcttaattttctcaaacatgttcgttaacttatttcttttattcaatttggtcaaattttgat 44746847  T
Q  473 acttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttattt 556  Q
    | |||||||||| |        ||| | |||||| ||| |||||||||| |||||||| ||||| | |||||||||||||||||    
T  44746848 aattttaatcccttagaaaaagagaccgttggattacggaggtctatcatattttatagtgtattatcaacacctaatttattt 44746931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 369 - 549
Target Start/End: Original strand, 44230445 - 44230625
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattt 468  Q
    ||||||||  |||||||||||||||||||| ||  ||||||| ||||||||||||| |||||| ||||||||||||||||||||||||| | ||||||||    
T  44230445 atcccttagattatttcttttattcaatttagttccataagttttaactttctcaatcacgtcctttaacttatttcttttattcaatttggtccaattt 44230544  T
Q  469 tgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaa 549  Q
    | ||| ||| ||||||||        ||| | |||||| ||  ||||||||||||||||| | ||||||| ||||||||||    
T  44230545 taataatttcaatcccctacgaaaagagaccgttggattacagaggtctatcagattttacagtgtatcatcaacacctaa 44230625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 434 - 570
Target Start/End: Complemental strand, 44748598 - 44748462
Alignment:
Q  434 ttaacttatttcttttattcaattcgatccaattttgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatg 533  Q
    |||| ||||||||||||||||||  | ||||||||||||| ||||||||||||        |||   |||||| ||||||||||||||||||||||| ||    
T  44748598 ttaatttatttcttttattcaatatggtccaattttgataattttaatcccctagaaaaggagactgttggattacgaaggtctatcagattttatagtg 44748499  T
Q  534 tatcaccaacacctaatttatttactttcttcttctt 570  Q
    |||||||||||||||||||||||||||||||||||||    
T  44748498 tatcaccaacacctaatttatttactttcttcttctt 44748462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 287 - 401
Target Start/End: Original strand, 19217623 - 19217737
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  |||||||||        ||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  19217623 tttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccattaacttatttct 19217722  T
Q  387 tttattcaatttggt 401  Q
    |||||||||||||||    
T  19217723 tttattcaatttggt 19217737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 434 - 601
Target Start/End: Complemental strand, 43115122 - 43114955
Alignment:
Q  434 ttaacttatttcttttattcaattcgatccaattttgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatg 533  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |        ||| | |||||| ||  | ||||||||||||||||| ||    
T  43115122 ttaacttatttcttttattcaatttgatccaattttgataattttaatcccttaaaaaagaagaccgttggattactgaagtctatcagattttatagtg 43115023  T
Q  534 tatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
     |||| ||  ||||||||||||||||||||||||||| ||||||||| ||||| | ||||||||||||    
T  43115022 catcatcataacctaatttatttactttcttcttcttcttccctcatcttcattttcattcatccttc 43114955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 294 - 403
Target Start/End: Original strand, 3537429 - 3537538
Alignment:
Q  294 ttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattc 393  Q
    |||||||||||||||||  |||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3537429 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttcttttattc 3537528  T
Q  394 aatttggtct 403  Q
    ||||| ||||    
T  3537529 aatttagtct 3537538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 288 - 401
Target Start/End: Original strand, 29186661 - 29186774
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    ||||||||||||||||||| |||  |||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  29186661 ttaggcttaattgatctgctggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttatt 29186760  T
Q  388 ttattcaatttggt 401  Q
    ||||||||||||||    
T  29186761 ttattcaatttggt 29186774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 43113673 - 43113785
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||| ||||  |||||||||        ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  43113673 aggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtctcataagttttaactttctcaaacacgtcccttaacttatttctttt 43113772  T
Q  390 attcaatttggtc 402  Q
    |||||||||||||    
T  43113773 attcaatttggtc 43113785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 48792439 - 48792551
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  |||||||||        |||||||||||||||||||||||||||||| |||||||  |||||||||||||||||    
T  48792439 tttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttttcaaacatgtcccttaacttatttct 48792538  T
Q  387 tttattcaatttg 399  Q
    |||||||||||||    
T  48792539 tttattcaatttg 48792551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 746 - 856
Target Start/End: Complemental strand, 18852157 - 18852041
Alignment:
Q  746 agcatttcacaaaaccagcaacaataactccttaacttcaacaaccatggcagcatcttctctaacatcctcattctact------cattcacaacatcc 839  Q
    |||||| ||||| | ||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||    
T  18852157 agcattgcacaacaacagtagcaatcactccttaacttcaacaaccatggcagcatcttctctaacatcctcattctactccttcccattcacaacatcc 18852058  T
Q  840 cccaaatcttcttacct 856  Q
    |||||||||||| ||||    
T  18852057 cccaaatcttctcacct 18852041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 13750754 - 13750643
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        |||||||||| || ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  13750754 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttgatcacataagtcttaactttctcaaacacgtcccttaacttatttctttta 13750655  T
Q  391 ttcaatttggtc 402  Q
    ||||||||||||    
T  13750654 ttcaatttggtc 13750643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 285 - 399
Target Start/End: Complemental strand, 43962693 - 43962579
Alignment:
Q  285 aatttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttattt 384  Q
    ||||||||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| ||| ||||||||||||  |||||||||||||||    
T  43962693 aatttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcacataagtcttagctttctcaaacatgtcccttaacttattt 43962594  T
Q  385 cttttattcaatttg 399  Q
    |||||||||||||||    
T  43962593 cttttattcaatttg 43962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 288 - 401
Target Start/End: Complemental strand, 32519870 - 32519757
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    ||||||| |||||||||||||||  ||||| |||        ||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||    
T  32519870 ttaggctaaattgatctgccggtcccttaatttatttcttttattcaatttggtcccataaatcttaactttctcaaacacatcccttaaattatttctt 32519771  T
Q  388 ttattcaatttggt 401  Q
    ||||||||||||||    
T  32519770 ttattcaatttggt 32519757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 512 - 601
Target Start/End: Original strand, 37235945 - 37236034
Alignment:
Q  512 aggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||  ||||||| ||||| ||| ||||||||||||||||||||    
T  37235945 aggtcaatcagattttacaatgtatcaccaacacctaatttatttactttactcttcttcttcccacatcttcatctacattcatccttc 37236034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 287 - 402
Target Start/End: Original strand, 44417453 - 44417568
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  |||||||||        |||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||| |    
T  44417453 tttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggttccataagtcttaacattctcaaacacgtcccttaacttatttat 44417552  T
Q  387 tttattcaatttggtc 402  Q
    ||| ||||||||||||    
T  44417553 tttcttcaatttggtc 44417568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 434 - 588
Target Start/End: Original strand, 26005434 - 26005588
Alignment:
Q  434 ttaacttatttcttttattcaattcgatccaattttgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatg 533  Q
    |||||||||||||||||||||||| | | ||||||||||| ||||| ||| ||        ||| | |||||| || ||||||||| |||||||||| ||    
T  26005434 ttaacttatttcttttattcaatttggttcaattttgataattttactccactaaaaaaagagaccgttggattacaaaggtctataagattttatagtg 26005533  T
Q  534 tatcaccaacacctaatttatttactttcttcttctttttccctcatattcatct 588  Q
    |||||||||||| |||||||| |||||||||| |||| ||| ||||| |||||||    
T  26005534 tatcaccaacacgtaatttatgtactttcttcatcttcttctctcatcttcatct 26005588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 48793635 - 48793526
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    ||||||||||||| |||||||  |||||||||        ||||| ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||    
T  48793635 aggcttaattgatttgccggtcccttaacttatttcttttattcattttggtcccataagtcttaactttttcaaacacgtcccttaacttatttctttt 48793536  T
Q  390 attcaatttg 399  Q
    ||||||||||    
T  48793535 attcaatttg 48793526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 27072733 - 27072661
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||| |||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  27072733 attcaatttgatcccataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtc 27072661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 27205580 - 27205652
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||| |||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  27205580 attcaatttgatcccataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtc 27205652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 286 - 398
Target Start/End: Complemental strand, 29188153 - 29188041
Alignment:
Q  286 atttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttc 385  Q
    |||||||||||| ||||||||||||   ||||||||        ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||     
T  29188153 atttaggcttaaatgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaatttattta 29188054  T
Q  386 ttttattcaattt 398  Q
    |||||||||||||    
T  29188053 ttttattcaattt 29188041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 330 - 398
Target Start/End: Complemental strand, 44420601 - 44420533
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaattt 398  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  44420601 attcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaattt 44420533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 374 - 457
Target Start/End: Original strand, 12630526 - 12630609
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaatt 457  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||   ||||||||| |||||| |||||||    
T  12630526 ttaacttatgtcttttattcaatttggtctcataagtcttaactttctcaaacatgttccttaacttatgtcttttcttcaatt 12630609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 330 - 401
Target Start/End: Original strand, 32518460 - 32518531
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggt 401  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  32518460 attcaatttggtcccataaatcttaactttctcaaacacgtcccttaaattatttcttttattcaatttggt 32518531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 495 - 601
Target Start/End: Complemental strand, 44231835 - 44231726
Alignment:
Q  495 agatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttct---tcttctttttccctcatattcatctaca 591  Q
    ||||| ||||||||  |||||||| ||||||||||| |||||||||||||||| |||||||||||||||   ||||||| ||||||||| ||||||| ||    
T  44231835 agatcgttggataagtaaggtctaccagattttatagtgtatcaccaacacctgatttatttactttcttcctcttcttcttccctcatcttcatcttca 44231736  T
Q  592 ttcatccttc 601  Q
    |||| |||||    
T  44231735 ttcaaccttc 44231726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 9391519 - 9391629
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        |||||||||||||| |||| | |||| |||||||||||| |||||| ||||||||||||||    
T  9391519 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataaatcttaattttctcaaacacgtcccttcacttatttctttta 9391618  T
Q  391 ttcaatttggt 401  Q
    |||||||||||    
T  9391619 ttcaatttggt 9391629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 45688886 - 45688944
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacac 428  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45688886 tcccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacac 45688944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 370 - 471
Target Start/End: Original strand, 37235832 - 37235933
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||| ||||||||  ||||| ||  ||||||||||||| ||||  ||||||||||||||| |||||||| | |||||||||    
T  37235832 tcccttaacttatttcttttatttaatttggttccataaatcccaactttctcaaacgcgtcccttaacttatttctttgattcaatttggtccaatttt 37235931  T
Q  470 ga 471  Q
    ||    
T  37235932 ga 37235933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 44230466 - 44230538
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||| || |||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  44230466 attcaatttagttccataagttttaactttctcaatcacgtcctttaacttatttcttttattcaatttggtc 44230538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 288 - 402
Target Start/End: Complemental strand, 18788681 - 18788567
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    ||||||||||||||| |||||||  ||||| |||        ||||||| |||||| |||| | ||||||||||||||||  ||||||||||||||||||    
T  18788681 ttaggcttaattgatatgccggtcccttaatttatttcttttattcaatatggtcctataaatcttaactttctcaaacatgtcccttaacttatttctt 18788582  T
Q  388 ttattcaatttggtc 402  Q
    |||||||||||||||    
T  18788581 ttattcaatttggtc 18788567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 520 - 601
Target Start/End: Complemental strand, 9357745 - 9357664
Alignment:
Q  520 cagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| |||| || |||||| ||||||| |||||| |||||    
T  9357745 cagatcttatagtgtatcaccaacacctaatttatttactttcttcatcttctttcctcatcttcatcttcattcaaccttc 9357664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 13597183 - 13597252
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  13597183 attcaatttggtcctataagtcttaactttctcaaacacgtccctgaacttatttcttttattaaatttg 13597252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 291 - 398
Target Start/End: Complemental strand, 3538681 - 3538574
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||| ||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| ||  || ||||||||||||||    
T  3538681 ggcttaattgatccgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcttttcacttatttctttta 3538582  T
Q  391 ttcaattt 398  Q
    ||||||||    
T  3538581 ttcaattt 3538574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 433 - 568
Target Start/End: Complemental strand, 13599294 - 13599158
Alignment:
Q  433 tttaacttatttcttttattcaattcgatccaattttgatacttttaatcccct-nnnnnnntagatcattggataacgaaggtctatcagattttataa 531  Q
    ||||||||||||||||||||||||| | ||||||||||||| |||||||  | |         | ||  |||||| ||| |||||||||||||||||||     
T  13599294 tttaacttatttcttttattcaatttgctccaattttgataattttaatatcttaaaaaaaaaaaattgttggattacggaggtctatcagattttatag 13599195  T
Q  532 tgtatcaccaacacctaatttatttactttcttcttc 568  Q
    |||||||  ||||||||||||||||||||||||||||    
T  13599194 tgtatcagtaacacctaatttatttactttcttcttc 13599158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 495 - 593
Target Start/End: Original strand, 45398667 - 45398764
Alignment:
Q  495 agatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacatt 593  Q
    |||||||||||||| | |||| ||||| || ||||| ||||||||||||| |||||||||||||||||||| |||| || |||||| ||||||| ||||    
T  45398667 agatcattggataagggaggtttatcaaatcttatagtgtatcaccaacatctaatttatttactttcttcatcttctt-cctcatcttcatcttcatt 45398764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 9392879 - 9392822
Alignment:
Q  345 ataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    |||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  9392879 ataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtc 9392822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 291 - 384
Target Start/End: Original strand, 45688867 - 45688960
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttattt 384  Q
    ||||||||||||||| ||||  |||||||||        ||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  45688867 ggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacatcccttaactcattt 45688960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 7011672 - 7011744
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||| || ||||||| |||||||| |||||||  ||||||| |||||||||||||||||||||||||    
T  7011672 attcaatttgatctcataagtcttaactttatcaaacatgtcccttagcttatttcttttattcaatttggtc 7011744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 7027030 - 7027102
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||| || ||||||| |||||||| |||||||  ||||||| |||||||||||||||||||||||||    
T  7027030 attcaatttgatctcataagtcttaactttatcaaacatgtcccttagcttatttcttttattcaatttggtc 7027102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 18787191 - 18787259
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||||| | |||||||| ||||| |  |||||||||||||||||||||||||||||||||    
T  18787191 aatttggtcccataaatcttaactttttcaaatatgtcccttaacttatttcttttattcaatttggtc 18787259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 289 - 384
Target Start/End: Original strand, 42611433 - 42611528
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttattt 384  Q
    ||||||||||||||||||||||   ||||||||        |||||||||||| |||||||||||||||||||||||||||  |||||||| ||||    
T  42611433 taggcttaattgatctgccggtcctttaacttatttcttttattcaatttggttccataagttttaactttctcaaacacactccttaactcattt 42611528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 374 - 428
Target Start/End: Original strand, 42611458 - 42611512
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacac 428  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||||||    
T  42611458 ttaacttatttcttttattcaatttggttccataagttttaactttctcaaacac 42611512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 379
Target Start/End: Complemental strand, 26006862 - 26006773
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||| ||||  |||||||||         ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  26006862 aggcttaattgatctgtcggtcccttaacttatttcttttgttcaatttggtcccataagttttaactatcacaaacacatcccttaact 26006773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 379
Target Start/End: Original strand, 27071019 - 27071108
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||||||||   ||||||||        |||||||||||||||||||||||||||  || ||||||||||||||||||    
T  27071019 aggcttaattgatctgccggtcatttaacttatttcttttattcaatttggtcccataagttttaacagtcacaaacacatcccttaact 27071108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 379
Target Start/End: Complemental strand, 27207294 - 27207205
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||||||||   ||||||||        |||||||||||||||||||||||||||  || ||||||||||||||||||    
T  27207294 aggcttaattgatctgccggtcatttaacttatttcttttattcaatttggtcccataagttttaacagtcacaaacacatcccttaact 27207205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 37237300 - 37237234
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||||||||  ||||||| |||||||||    
T  37237300 aatttggtctcataagtcttaactctctcaaacacatcccttaacttatt--ttttattaaatttggtc 37237234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 43853871 - 43853786
Alignment:
Q  85 cccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaatttttgtgttaaaatacaatagcggatccgaatccgctac 170  Q
    ||||||||||||| ||||| ||||| ||  |||||||||||||| |||||  || |||||| |||||||||||| |||||||||||    
T  43853871 cccaaaatgccctcaaaatggttttaaagttagggtcaatttgggattttcctgctaaaatccaatagcggatcagaatccgctac 43853786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 44231941 - 44231892
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaacttt 419  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  44231941 tcccttaacttatttcttttattcaatttggtcccataaatcttaacttt 44231892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 294 - 402
Target Start/End: Original strand, 44746729 - 44746837
Alignment:
Q  294 ttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattc 393  Q
    |||||||||||| |||| ||||||||||        |||||||||| ||  |||||| |||| |||||||||||  | | ||||||||||||||||||||    
T  44746729 ttaattgatctgtcggtctcttaacttattttttttattcaatttgatcttataagtcttaattttctcaaacatgttcgttaacttatttcttttattc 44746828  T
Q  394 aatttggtc 402  Q
    |||||||||    
T  44746829 aatttggtc 44746837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 292 - 379
Target Start/End: Complemental strand, 7057446 - 7057359
Alignment:
Q  292 gcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||||||  |||||||||        |||||||||||||||||||||||||||  || ||||||||||||| ||||    
T  7057446 gcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagttttaaccgtcacaaacacatccctcaact 7057359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 7057428 - 7057382
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaac 416  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  7057428 tcccttaacttatttcttttattcaatttggtcccataagttttaac 7057382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 26006842 - 26006784
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacac 428  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||||| || |||||||    
T  26006842 tcccttaacttatttcttttgttcaatttggtcccataagttttaactatcacaaacac 26006784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 37235811 - 37235924
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||  ||||||||  |||||||||        ||| |||||||| |||||| |   ||||||||||||| | |||||||||||||||||||    
T  37235811 taggcttaattggcctgccggtcccttaacttatttcttttatttaatttggttccataaatcccaactttctcaaacgcgtcccttaacttatttcttt 37235910  T
Q  389 tattcaatttggtc 402  Q
     |||||||||||||    
T  37235911 gattcaatttggtc 37235924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 370 - 441
Target Start/End: Original strand, 19008950 - 19009021
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaactta 441  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||| ||| |||| | ||||  ||||||||    
T  19008950 tcccttaacttatttctttttttcaatttggtcccataagtattaaatttgtcaatcgcgtcccttaactta 19009021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 370 - 441
Target Start/End: Complemental strand, 19016796 - 19016725
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaactta 441  Q
    |||||||| ||||||||||| |||||||||||| ||||||| |||| ||| |||| ||||||  ||||||||    
T  19016796 tcccttaatttatttctttttttcaatttggtcccataagtattaaatttgtcaaccacgtcccttaactta 19016725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 335 - 402
Target Start/End: Complemental strand, 45400084 - 45400017
Alignment:
Q  335 atttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||| ||||| | ||||||||  ||||||| ||||||||||||||||||||||| | |||||||    
T  45400084 atttggtctcataactcttaacttttgcaaacacgtcccttaacttatttcttttatttactttggtc 45400017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 374 - 416
Target Start/End: Original strand, 27071043 - 27071085
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaac 416  Q
    ||||||||||||||||||||||||||||| ||||||| |||||    
T  27071043 ttaacttatttcttttattcaatttggtcccataagttttaac 27071085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 374 - 416
Target Start/End: Complemental strand, 27207270 - 27207228
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaac 416  Q
    ||||||||||||||||||||||||||||| ||||||| |||||    
T  27207270 ttaacttatttcttttattcaatttggtcccataagttttaac 27207228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 358 - 399
Target Start/End: Original strand, 43961000 - 43961041
Alignment:
Q  358 ttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  43961000 ttctcaaacacgtcccttaatttatttcttttattcaatttg 43961041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 564
Target Start/End: Complemental strand, 3538541 - 3538478
Alignment:
Q  501 ttggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttctt 564  Q
    |||||| ||| || ||||||| ||||||   ||||||||||||| |||||||||||||||||||    
T  3538541 ttggattacggagatctatcaaattttacggtgtatcaccaacatctaatttatttactttctt 3538478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 532 - 567
Target Start/End: Original strand, 13749183 - 13749218
Alignment:
Q  532 tgtatcaccaacacctaatttatttactttcttctt 567  Q
    |||||||||||||||||||||||||| |||||||||    
T  13749183 tgtatcaccaacacctaatttatttaatttcttctt 13749218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 401
Target Start/End: Original strand, 26005430 - 26005461
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggt 401  Q
    ||||||||||||||||||||||||||||||||    
T  26005430 tcccttaacttatttcttttattcaatttggt 26005461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 495 - 565
Target Start/End: Original strand, 45688992 - 45689060
Alignment:
Q  495 agatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttc 565  Q
    ||||| |||||||| | || ||||||||||   ||| |||||||||||||| |||||||||||||||||||    
T  45688992 agatcgttggataagggagatctatcagatc--atagtgtatcaccaacacttaatttatttactttcttc 45689060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 19016775 - 19016725
Alignment:
Q  331 ttcaatttggtcccataagttttaactttctcaaacacatcccttaactta 381  Q
    |||||||||||||||||||| |||| ||| |||| ||| ||||||||||||    
T  19016775 ttcaatttggtcccataagtattaaatttgtcaaccacgtcccttaactta 19016725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 495 - 601
Target Start/End: Original strand, 27071145 - 27071249
Alignment:
Q  495 agatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattc 594  Q
    ||||| ||||||||   ||||||| ||||| ||||||| |||||||||||||| | ||||||| ||||||| | || ||||| ||| ||||||  |||||    
T  27071145 agatcgttggataagagaggtctaccagatcttataatatatcaccaacacctga-ttatttaatttcttcatgttcttccc-catcttcatcatcattc 27071242  T
Q  595 atccttc 601  Q
    |||||||    
T  27071243 atccttc 27071249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 495 - 601
Target Start/End: Complemental strand, 27207168 - 27207064
Alignment:
Q  495 agatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattc 594  Q
    ||||| ||||||||   ||||||| ||||| ||||||| |||||||||||||| | ||||||| ||||||| | || ||||| ||| ||||||  |||||    
T  27207168 agatcgttggataagagaggtctaccagatcttataatatatcaccaacacctga-ttatttaatttcttcatgttcttccc-catcttcatcatcattc 27207071  T
Q  595 atccttc 601  Q
    |||||||    
T  27207070 atccttc 27207064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 495 - 587
Target Start/End: Complemental strand, 22794299 - 22794206
Alignment:
Q  495 agatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttac-tttcttcttctttttccctcatattcatc 587  Q
    ||||| ||||||||   ||||||||||||| | ||  ||||||||||||| || |||||||| | ||||||| |||| ||||||||| ||||||    
T  22794299 agatcgttggataaatgaggtctatcagatctaattgtgtatcaccaacatctgatttattttcttttcttcatcttcttccctcatcttcatc 22794206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 501 - 592
Target Start/End: Original strand, 36395958 - 36396051
Alignment:
Q  501 ttggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatt-tac-tttcttcttctttttccctcatattcatctacat 592  Q
    |||||||| | || || ||||||||| | | ||||||||||||| |||||||||| ||| ||||||| |||| ||||| ||| |||||||||||    
T  36395958 ttggataaaggagatccatcagatttaacagtgtatcaccaacatctaatttattatacttttcttcatcttcttcccacatcttcatctacat 36396051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 2e-73; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 26364760 - 26364988
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||    
T  26364760 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacatcctttaacttatttcttttattcaatttgatccaatttt 26364859  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||| ||        ||| | |||||| ||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  26364860 gataattttaatcctctaaaaaaagagaccgttggattacagaggtctatcagattttataatgtatcaccaacacctaatttatttagtttcttcttc- 26364958  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
      ||||||||| ||||||||| ||||||||||    
T  26364959 --ttccctcatcttcatctacgttcatccttc 26364988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 374 - 601
Target Start/End: Original strand, 30640821 - 30641047
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||||||| ||||||||||| |||    
T  30640821 ttaacttatttcttttattcaatttggtcccataagttttaaccttatcaaacacgtca-ttaacttatttcttttattcaatttgatccaattttaata 30640919  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttcttttt 573  Q
     ||||||||||||        ||| | |||||| ||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  30640920 attttaatcccctaaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcaccaacacctaatttatttactttcttcttcttctt 30641019  T
Q  574 ccctcatattcatctacattcatccttc 601  Q
    |||| || ||||||||||||||||||||    
T  30641020 cccttatcttcatctacattcatccttc 30641047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 9244084 - 9244315
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||| |||||||||||| | | |||||||    
T  9244084 tcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttattttattcaatttggttcaatttt 9244183  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| |||||||||| |        ||| | | |||| ||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |    
T  9244184 gataattttaatcccttaaaaaatgagaccgtaggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttattttcttctttt 9244283  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | ||||||||| ||||||||||||||| ||||    
T  9244284 tcttccctcatcttcatctacattcattcttc 9244315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 370 - 599
Target Start/End: Complemental strand, 522196 - 521970
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||  ||||||||||| |||||||||||| |||| ||||||    
T  522196 tcccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacatgtcccttaacttatttattttattcaatttgatctaatttt 522097  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        |||   |||||| ||| |||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||     
T  522096 gataattttaatcccctagaaaaagagactgttggattacggaggtctatcaaattttatagtgtatcaccaacccctaatttatttactttcttcttc- 521998  T
Q  570 ttttccctcatattcatctacattcatcct 599  Q
      ||||||||| ||||||||||||||||||    
T  521997 --ttccctcatcttcatctacattcatcct 521970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 372 - 601
Target Start/End: Complemental strand, 30644801 - 30644576
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttga 471  Q
    |||||| |||||||||||||| ||||||||| ||||| ||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||    
T  30644801 ccttaatttatttcttttatttaatttggtcccataaatcttaactttctcaaacacgtctcttaacttatttcttttattcaatttgatccaattttga 30644702  T
Q  472 tacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttcttt 571  Q
    || ||||||||| ||        ||| | |||||| ||| |||||||||| ||||||||||| ||||||||||||||||||||||| ||| ||||||       
T  30644701 taattttaatcctctaaaaaag-agaccgttggattacggaggtctatcaaattttataatggatcaccaacacctaatttatttagttttttcttc--- 30644606  T
Q  572 ttccctcatattcatctacattcatccttc 601  Q
    ||||||||| ||||||||||||||||||||    
T  30644605 ttccctcatcttcatctacattcatccttc 30644576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 20308942 - 20309173
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||  |||| |||||  |||||||||||| | |||||||||    
T  20308942 tcccttaacttatttcttttattcaattgagtcccataagttttaactttctcaaacacgtcccttaatttattgtttttattcaatttggtccaatttt 20309041  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| |||| |||||||        ||| | |||||| ||  ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  20309042 gataattttgatcccctagaaaaagagaccgttggatcactgaggtctatcagattttatagtgtatcaccaatacctaatttatttactttcttcttct 20309141  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | |||| |||| ||||||| ||||||||||||    
T  20309142 tcttccatcatcttcatctccattcatccttc 20309173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 21095575 - 21095806
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||  |||| |||||  |||||||||||| | |||||||||    
T  21095575 tcccttaacttatttcttttattcaattgagtcccataagttttaactttctcaaacacgtcccttaatttattgtttttattcaatttggtccaatttt 21095674  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| |||| |||||||        ||| | |||||| ||  ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  21095675 gataattttgatcccctagaaaaagagaccgttggatcactgaggtctatcagattttatagtgtatcaccaatacctaatttatttactttcttcttct 21095774  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | |||| |||| ||||||| ||||||||||||    
T  21095775 tcttccatcatcttcatctccattcatccttc 21095806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 374 - 601
Target Start/End: Original strand, 43584431 - 43584655
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||    
T  43584431 ttaacttatttcttttattcaatttgatctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttgatccaattttgata 43584530  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttcttttt 573  Q
     ||||||||   |        ||| | |||||| || || |||||||||||||||||||||||||||||   |||||||||||||||||||||||   ||    
T  43584531 attttaatcttttaaaaaaagagaccgttggattacaaaagtctatcagattttataatgtatcaccaatgtctaatttatttactttcttcttc---tt 43584627  T
Q  574 ccctcatattcatctacattcatccttc 601  Q
    || |||| ||||||| ||||| ||||||    
T  43584628 ccatcatcttcatcttcattcgtccttc 43584655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 374 - 570
Target Start/End: Complemental strand, 9245526 - 9245330
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||| |||||| ||||||||||||   ||||||||| |||    
T  9245526 ttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaatttatttattttattcaatttagtccaatttttata 9245427  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
     ||||||||||||        ||| | ||||||  |  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9245426 attttaatcccctaaaaaaagagaccgttggattgctgaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttctt 9245330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 369 - 601
Target Start/End: Complemental strand, 26366294 - 26366062
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattt 468  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||| || ||||||| ||    ||||||||||||||||||||||| | |||| |||    
T  26366294 atcctttaacttatttcttttatttaatttggtttcataagtcttaaccttatcaaacatgttccataacttatttcttttattcaatttggtccatttt 26366195  T
Q  469 tgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
    | ||| ||||||||||||        ||| | || ||| ||| |||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  26366194 taataattttaatcccctaaaaaaaaagaccgttagattacggaggtctattagattttatagtgtatcaccaacacataatttatttactttcttcttc 26366095  T
Q  569 tttttccctcatattcatctacattcatccttc 601  Q
    || |||||| || ||| ||||||||||||||||    
T  26366094 ttcttccctaatcttcttctacattcatccttc 26366062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 370 - 574
Target Start/End: Complemental strand, 20310151 - 20309946
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||| ||| | | |||||||    
T  20310151 tcccttaacttatttcttttattcattttggtctcataagtcttaagtttctcaaacacgtcccttaacttatttcttttattcgatttggttcaatttt 20310052  T
Q  470 gatacttttaatcccct-nnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
    |||| |||||||||| |         ||| | |||||| | |||||||| |||||||||||| ||||||||| |||||||| |||||||||||||| |||    
T  20310051 gataattttaatcccttagaaaaaaaagaccgttggattatgaaggtctgtcagattttatagtgtatcacctacacctaacttatttactttctttttc 20309952  T
Q  569 tttttc 574  Q
    ||||||    
T  20309951 tttttc 20309946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 370 - 574
Target Start/End: Complemental strand, 21096784 - 21096579
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||| ||| | | |||||||    
T  21096784 tcccttaacttatttcttttattcattttggtctcataagtcttaagtttctcaaacacgtcccttaacttatttcttttattcgatttggttcaatttt 21096685  T
Q  470 gatacttttaatcccct-nnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
    |||| |||||||||| |         ||| | |||||| | |||||||| |||||||||||| ||||||||| |||||||| |||||||||||||| |||    
T  21096684 gataattttaatcccttagaaaaaaaagaccgttggattatgaaggtctgtcagattttatagtgtatcacctacacctaacttatttactttctttttc 21096585  T
Q  569 tttttc 574  Q
    ||||||    
T  21096584 tttttc 21096579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 377 - 570
Target Start/End: Original strand, 41636857 - 41637050
Alignment:
Q  377 acttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgatactt 476  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| |||||||||  |||| ||||||||||||||||||| | ||||| ||| ||| ||    
T  41636857 acttatttctttcattcaatttggtcccataagtcttaactttctaaaacacgtcccttaatttatttcttttattcaatttggtccaacttttataatt 41636956  T
Q  477 ttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
    ||||||||||        ||| | |||||| ||| | ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  41636957 ttaatcccctaaaaaaagagaccgttggattacggaagtctatcagattttatcgtgtatcaccaacacctaatttatttactttcttcttctt 41637050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 370 - 588
Target Start/End: Complemental strand, 41638251 - 41638035
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | |||||||||    
T  41638251 tcccttaacttatttcttttattcaatttattctcataagtcttaactttctcaaacatgtcctttaacttatttcttttattcaatttggtccaatttt 41638152  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
     ||| ||||||||||||        |||  ||||||| ||  ||||||||||  ||||||| ||||||||||||||||||||| ||| |||| ||| |||    
T  41638151 aataattttaatcccctaaaaaag-agacaattggattacagaggtctatcatgttttatagtgtatcaccaacacctaattt-tttgctttattcatct 41638054  T
Q  570 ttttccctcatattcatct 588  Q
    | ||||  |||||||||||    
T  41638053 tcttcctccatattcatct 41638035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 373 - 561
Target Start/End: Original strand, 34642687 - 34642874
Alignment:
Q  373 cttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgat 472  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||||||||||||| | |  |||||||||    
T  34642687 cttaacttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtttaattttgat 34642786  T
Q  473 acttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttacttt 561  Q
    | ||||||||||||        | | | ||||||  || ||||||||||||||||||| | ||||||||||| ||||||||||||||||    
T  34642787 aattttaatcccctaaaaaaa-aaaccgttggattgcggaggtctatcagattttatagtatatcaccaacatctaatttatttacttt 34642874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 43586043 - 43585813
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| |||  |||| ||||||| ||||||||||| |||||||||||    
T  43586043 tcccttaacttatttcttttatttaatttgatctcataagtcttaattttctcaaacatgtctattaaattatttcatttattcaatttgatccaatttt 43585944  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
     ||| ||||||| || |        ||| |||||||| | ||||||||| || |||||||| ||||||| ||| |||||||||||||| ||||||| |||    
T  43585943 aataattttaat-cctttaaaaaaaagaccattggattatgaaggtctaccatattttatagtgtatcatcaatacctaatttatttattttcttcatct 43585845  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | ||||  ||| ||||||  |||||| |||||    
T  43585844 tcttcctccatcttcatcatcattcaaccttc 43585813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 34644058 - 34643833
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||| ||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||  |||| |||||||||||||| ||||   | |||||||    
T  34644058 tcccttgacttatttcttttattcaatttg-tcccataaatcttaactttctcaaacacctctattaatttatttcttttatttaatttagttcaatttt 34643960  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||| | ||||||     ||||||||||||||||||   ||||||||||||||||||||||||   ||||||||||    
T  34643959 gataattttaatcccctaaaaaa--agaccgttggat---tgaggtctatcagattttatggcgtatcaccaacacctaatttatttggattcttcttct 34643865  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | ||||||||| |||||||||||| |||||||    
T  34643864 tcttccctcatcttcatctacattaatccttc 34643833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 287 - 401
Target Start/End: Original strand, 9244061 - 9244175
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    |||||||||||||||||||| |||  |||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  9244061 tttaggcttaattgatctgctggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttat 9244160  T
Q  387 tttattcaatttggt 401  Q
    |||||||||||||||    
T  9244161 tttattcaatttggt 9244175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 26364741 - 26364849
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||    
T  26364741 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacatcctttaacttatttctttta 26364840  T
Q  391 ttcaatttg 399  Q
    |||||||||    
T  26364841 ttcaatttg 26364849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 293 - 401
Target Start/End: Original strand, 34642667 - 34642775
Alignment:
Q  293 cttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttatt 392  Q
    |||||||||||||||||| ||||||||||        |||||||||||||  |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  34642667 cttaattgatctgccggtctcttaacttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaacttatttcttttatt 34642766  T
Q  393 caatttggt 401  Q
    |||||||||    
T  34642767 caatttggt 34642775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 289 - 379
Target Start/End: Complemental strand, 3714640 - 3714550
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    ||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3714640 taggcttaattgatctgccggttccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacatcccttaact 3714550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 20308921 - 20309034
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||||||  |||||||||        ||||||||  ||||||||||||||||||||||||||||| |||||||| |||||  |||    
T  20308921 taggcttaattgatctgccggtcccttaacttatttcttttattcaattgagtcccataagttttaactttctcaaacacgtcccttaatttattgtttt 20309020  T
Q  389 tattcaatttggtc 402  Q
    ||||||||||||||    
T  20309021 tattcaatttggtc 20309034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 21095554 - 21095667
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||||||  |||||||||        ||||||||  ||||||||||||||||||||||||||||| |||||||| |||||  |||    
T  21095554 taggcttaattgatctgccggtcccttaacttatttcttttattcaattgagtcccataagttttaactttctcaaacacgtcccttaatttattgtttt 21095653  T
Q  389 tattcaatttggtc 402  Q
    ||||||||||||||    
T  21095654 tattcaatttggtc 21095667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 372 - 453
Target Start/End: Original strand, 31202987 - 31203068
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattc 453  Q
    ||||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||||||  ||||||||||||||||||||    
T  31202987 ccttaacttatttcttttattcattttggtcccataaatcttaagtttctcaaacacgtcccttaacttatttcttttattc 31203068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 43584403 - 43584516
Alignment:
Q  286 atttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttc 385  Q
    |||||||||||||||||||| ||||   ||||||||        |||||||||| || ||||||| ||||||||||||||||| ||||||||||||||||    
T  43584403 atttaggcttaattgatctgtcggtccattaacttatttcttttattcaatttgatctcataagtcttaactttctcaaacacgtcccttaacttatttc 43584502  T
Q  386 ttttattcaatttg 399  Q
    ||||||||||||||    
T  43584503 ttttattcaatttg 43584516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 41636870 - 41636942
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  41636870 attcaatttggtcccataagtcttaactttctaaaacacgtcccttaatttatttcttttattcaatttggtc 41636942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 330 - 398
Target Start/End: Complemental strand, 9245510 - 9245442
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaattt 398  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| |||||||||||||    
T  9245510 attcaatttggtcccataagtcttaactttctcaaacacgtcccttaatttatttattttattcaattt 9245442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 41638270 - 41638159
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        |||||||||  || ||||||| ||||||||||||||||  ||| |||||||||||||||||    
T  41638270 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttattctcataagtcttaactttctcaaacatgtcctttaacttatttctttta 41638171  T
Q  391 ttcaatttggtc 402  Q
    ||||||||||||    
T  41638170 ttcaatttggtc 41638159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 522176 - 522107
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    |||||||||||| |||||||| ||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  522176 attcaatttggttccataagtcttaactttctcaaacatgtcccttaacttatttattttattcaatttg 522107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 30644779 - 30644714
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    ||||||||||||||| | ||||||||||||||||| || |||||||||||||||||||||||||||    
T  30644779 aatttggtcccataaatcttaactttctcaaacacgtctcttaacttatttcttttattcaatttg 30644714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 3714617 - 3714561
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacac 428  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  3714617 ccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacac 3714561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 330 - 401
Target Start/End: Complemental strand, 20310131 - 20310060
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggt 401  Q
    ||||| ||||||| ||||||| |||| |||||||||||| |||||||||||||||||||||||| |||||||    
T  20310131 attcattttggtctcataagtcttaagtttctcaaacacgtcccttaacttatttcttttattcgatttggt 20310060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 330 - 401
Target Start/End: Complemental strand, 21096764 - 21096693
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggt 401  Q
    ||||| ||||||| ||||||| |||| |||||||||||| |||||||||||||||||||||||| |||||||    
T  21096764 attcattttggtctcataagtcttaagtttctcaaacacgtcccttaacttatttcttttattcgatttggt 21096693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 495 - 570
Target Start/End: Original strand, 22012281 - 22012356
Alignment:
Q  495 agatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
    ||||| ||||||||   ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  22012281 agatcgttggataagtgaggtctaccagattttatagtgtatcaccaacacctgatttatttactttcttcttctt 22012356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 30640837 - 30640905
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    ||||||||||||||||||||||||||| || |||||||| | | ||||||||||||||||||||||||||    
T  30640837 attcaatttggtcccataagttttaaccttatcaaacacgt-cattaacttatttcttttattcaatttg 30640905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 512 - 572
Target Start/End: Original strand, 31203076 - 31203136
Alignment:
Q  512 aggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttt 572  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||| | |||||||    
T  31203076 aggtctatcaaattttataatgtatcaccaacacctaacttatttactttcattttctttt 31203136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 495 - 570
Target Start/End: Complemental strand, 22013233 - 22013158
Alignment:
Q  495 agatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
    ||||| ||||||||   ||||||| ||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  22013233 agatcgttggataagtgaggtctaccagattttatagtgtatcaccaacacctgatttatttactttcatcttctt 22013158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 31203005 - 31203068
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattc 393  Q
    ||||| ||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||    
T  31203005 attcattttggtcccataaatcttaagtttctcaaacacgtcccttaacttatttcttttattc 31203068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 495 - 565
Target Start/End: Complemental strand, 3714513 - 3714443
Alignment:
Q  495 agatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttc 565  Q
    ||||| |||||||| | || |||||||||| ||||| |||||||||||||| | |||||||||||||||||    
T  3714513 agatcgttggataagggagatctatcagatcttatagtgtatcaccaacacttgatttatttactttcttc 3714443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 43134128 - 43134079
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||    
T  43134128 attcaatttggtcctataacttttaactttcttaaacacatcccttaact 43134079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 344 - 379
Target Start/End: Original strand, 3713114 - 3713149
Alignment:
Q  344 cataagttttaactttctcaaacacatcccttaact 379  Q
    ||||||||||||||||||||||||||||||||||||    
T  3713114 cataagttttaactttctcaaacacatcccttaact 3713149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 43134144 - 43134090
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacac 428  Q
    |||||||||||||||||||||||||||||  |||| | |||||||||| ||||||    
T  43134144 ttaacttatttcttttattcaatttggtcctataacttttaactttcttaaacac 43134090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 379 - 428
Target Start/End: Original strand, 3713090 - 3713138
Alignment:
Q  379 ttatttcttttattcaatttggtctcataagtcttaactttctcaaacac 428  Q
    |||||||||||||| |||||||| |||||||| |||||||||||||||||    
T  3713090 ttatttcttttatttaatttggt-tcataagttttaactttctcaaacac 3713138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 22012176 - 22012225
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaacttt 419  Q
    |||||||||||||||||||  |||| ||||||||||||| ||||||||||    
T  22012176 tcccttaacttatttctttatttcagtttggtctcataactcttaacttt 22012225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 561
Target Start/End: Complemental strand, 43134025 - 43133976
Alignment:
Q  512 aggtctatcagattttataatgtatcaccaacacctaatttatttacttt 561  Q
    ||||||| ||||||||||| |||||||||||||| | |||||||||||||    
T  43134025 aggtctaccagattttatagtgtatcaccaacacttgatttatttacttt 43133976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 26366269 - 26366201
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||  ||||||| ||||| || |||||||  | || ||||||||||||||||||||||||||||    
T  26366269 aatttggtttcataagtcttaaccttatcaaacatgttccataacttatttcttttattcaatttggtc 26366201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 398
Target Start/End: Complemental strand, 34644038 - 34643971
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaattt 398  Q
    |||||||||| |||||||| | ||||||||||||||||| ||  |||| |||||||||||||| |||||    
T  34644038 attcaatttg-tcccataaatcttaactttctcaaacacctctattaatttatttcttttatttaattt 34643971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 495 - 565
Target Start/End: Original strand, 3713186 - 3713256
Alignment:
Q  495 agatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttc 565  Q
    ||||| |||||||| | || ||||| |||| ||||| |||||||| ||||| | |||||||||||||||||    
T  3713186 agatcgttggataagggagatctattagatcttatagtgtatcacaaacacttgatttatttactttcttc 3713256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 13341421 - 13341371
Alignment:
Q  80 aaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaa 130  Q
    |||||||||||||||||| ||||  ||||| ||| ||||||||||||||||    
T  13341421 aaatccccaaaatgccctcaaaaaggttttcaaaatagggtcaatttggaa 13341371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 22013338 - 22013289
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaacttt 419  Q
    |||||||||||||||||||  |||| ||||||| ||||| ||||||||||    
T  22013338 tcccttaacttatttctttatttcagtttggtcccataactcttaacttt 22013289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 7e-73; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 59 - 290
Target Start/End: Complemental strand, 50745352 - 50745104
Alignment:
Q  59 gaaaatgttaaggttaatttgaaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaatttttgtgttaaaatacaatagcggatc 158  Q
    ||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||| |||| |||||||||||||||||| |||||    
T  50745352 gaaaatgttaaggctaatttgaaatccccaaaatgccttcaaaacagttttgaaagtagggtcaatttgggatttatgtgttaaaatacaatagtggatc 50745253  T
Q  159 cgaatccgctacccgc--------gaactgct---------ggagcagtcgctaacctaagttgctcggctcggctcctaccattacttgccactcagct 241  Q
    ||||||||||||||||        ||||||||         ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||    
T  50745252 cgaatccgctacccgcctacacgcgaactgctatagctgctggagcagtcgctaacctgagttgctcggcccggctcctaccattacttgccactcggct 50745153  T
Q  242 acaccactatatcgcgctgttgactactctggccataatatacaattta 290  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  50745152 acaccactatatcgtgctattgactactctggccataatatacaattta 50745104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 34095758 - 34095527
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||| | |||||||||    
T  34095758 tcccttaacttattttttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttgttcaatttggtccaatttt 34095659  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||| | ||| || ||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  34095658 gataattttaatcccctaaaaaaggagaccgttgaattacggaggtctatcagattttatagtgtatcacccacacctaatttatttactttcttcttct 34095559  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | |||| |||| ||||||||||||||||||||    
T  34095558 tcttccatcatcttcatctacattcatccttc 34095527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 22621886 - 22622114
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||| | |||||||||    
T  22621886 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctttacttatttcttttattcaatttggtccaatttt 22621985  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||| | |||||| ||| ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||     
T  22621986 gataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccgacaccgaatttatttactttcttcttc- 22622084  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
      ||||||||| ||||||||||||||||||||    
T  22622085 --ttccctcatcttcatctacattcatccttc 22622114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 370 - 570
Target Start/End: Complemental strand, 7261642 - 7261442
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||  |||||||||||||||||||||||| | |||||||||    
T  7261642 tcccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaatttt 7261543  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||       |||| |||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7261542 gataattttaatcccctaaaaaaatagaccattggattacgaaggtctataagattttatagtgtatcaccaacacctaatttatttactttcttcttct 7261443  T
Q  570 t 570  Q
    |    
T  7261442 t 7261442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 59 - 290
Target Start/End: Original strand, 18123751 - 18123999
Alignment:
Q  59 gaaaatgttaaggttaatttgaaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaatttttgtgttaaaatacaatagcggatc 158  Q
    |||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  18123751 gaaaatgttagggttaatttgaaatccccaaaatgccctcaaaacagttttgaaagtagggtcaatttgggatttatgtgttaaaatacaatagcggatc 18123850  T
Q  159 cgaatccgctacc--------cgcgaa---------ctgctggagcagtcgctaacctaagttgctcggctcggctcctaccattacttgccactcagct 241  Q
    |||||||||||||        ||||||         |||||||||||||||||||||| |||||||||| |||||||||||||||||||  ||||| |||    
T  18123851 cgaatccgctacccgcctacacgcgaactgctatagctgctggagcagtcgctaacctgagttgctcggatcggctcctaccattactttgcactcggct 18123950  T
Q  242 acaccactatatcgcgctgttgactactctggccataatatacaattta 290  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  18123951 acaccactatattgcgctattgactactctgaccataatatacaattta 18123999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 17356380 - 17356611
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||||| |  || || ||||||||||||||||||||||  |||||||||||||||||||||||| | |||||||||    
T  17356380 tcccttaacttatttcttttattcaatttgatgccagaaatcttaactttctcaaacacgtcccttaacttatttcttttattcaatttgttccaatttt 17356479  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||| | |||||| ||| ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  17356480 gataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctagttcatttactttcttcttct 17356579  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | ||||||||| ||||||| ||||||||||||    
T  17356580 tcttccctcatcttcatcttcattcatccttc 17356611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 56235119 - 56234889
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||  |  |||||||||||||||||||||||||| || ||||||    
T  56235119 tcccttaatttatttcttttattcaatttgatctcataagtcttaactttatcaaacacaccccttaacttatttcttttattcaattcggtctaatttt 56235020  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||||||||||||| ||        ||| || || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  56235019 gatacttttaatcctctaaaaaac-agaccaatgaattacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttat 56234921  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | |||  |||| || |||||||||||||||||    
T  56234920 tcttctttcatctttatctacattcatccttc 56234889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 370 - 588
Target Start/End: Complemental strand, 38032519 - 38032301
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||| ||||||||||||||||| | |||||||||    
T  38032519 tcccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaatttt 38032420  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||| | |||||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  38032419 gataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttcttct 38032320  T
Q  570 ttttccctcatattcatct 588  Q
    | |||| |||| |||||||    
T  38032319 tcttccatcatcttcatct 38032301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 374 - 601
Target Start/End: Complemental strand, 8815452 - 8815219
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||| | | |||||||||||||    
T  8815452 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttctattcaaattggtccaattttgata 8815353  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttact------ttcttctt 567  Q
     ||||||||| ||        | | | |||||| ||| ||||||||||||||||||| ||||||||||||||| ||||||||||||      ||||||||    
T  8815352 attttaatcctctaaaaaaaaaaaccgttggattacggaggtctatcagattttatagtgtatcaccaacaccaaatttatttactttcttcttcttctt 8815253  T
Q  568 ctttttccctcatattcatctacattcatccttc 601  Q
    ||| ||||||||| ||||||||||||||||||||    
T  8815252 cttcttccctcatcttcatctacattcatccttc 8815219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 382 - 597
Target Start/End: Complemental strand, 22623230 - 22623018
Alignment:
Q  382 tttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgatacttttaat 481  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||  || ||||||||||||||||||||| | ||||||||||||| |||||||    
T  22623230 tttcttttattcaatttggtcccataagtcttaactttctcaagcacgtccctttacttatttcttttattcaatttggtccaattttgataattttaat 22623131  T
Q  482 cccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcata 581  Q
    |||||        ||| | |||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||   |||||||||     
T  22623130 cccctacaaaaagagaccgttggattacggaggtctatcagattttataatgtatcaccaacatctaatttatttactctcttcttc---ttccctcatc 22623034  T
Q  582 ttcatctacattcatc 597  Q
    ||||||||||||||||    
T  22623033 ttcatctacattcatc 22623018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 369 - 601
Target Start/End: Original strand, 10802907 - 10803139
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattt 468  Q
    |||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||  |||||||||||||||||||||||| | ||||||||    
T  10802907 atcccttaacttatttcttttattcaatttggtcccataaattttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattt 10803006  T
Q  469 tgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
    ||||| ||||||| ||||        ||| | |||||| ||| |||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  10803007 tgataattttaataccctaaaaaaagagaccgttggattacggaggtttatcagattttatattgtatcaccaacaccgaatttatttactttcttcttc 10803106  T
Q  569 tttttccctcatattcatctacattcatccttc 601  Q
      |   | |||| ||||||||||||||||||||    
T  10803107 cctcatcttcatcttcatctacattcatccttc 10803139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 369 - 601
Target Start/End: Original strand, 18091598 - 18091830
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattt 468  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||  ||||||||| | ||||||||||||   ||||||||    
T  18091598 atcccttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaaaacgtccattaacttatctattttattcaatttagtccaattt 18091697  T
Q  469 tgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
    ||||| |||||||| | |        ||| | ||| || ||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18091698 tgataattttaatctcttaaaaaatgagaccgttgaattacagaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttc 18091797  T
Q  569 tttttccctcatattcatctacattcatccttc 601  Q
    || ||||||||| ||||||||| ||||| ||||    
T  18091798 ttcttccctcatcttcatctaccttcattcttc 18091830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 370 - 570
Target Start/End: Original strand, 38031187 - 38031387
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||| ||||||||||||||||| | |||||||||    
T  38031187 tcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaatttt 38031286  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| |||||||||| |        ||| | ||| || ||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  38031287 gataattttaatcccataaaaaaaaagaccgttgaattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttcttct 38031386  T
Q  570 t 570  Q
    |    
T  38031387 t 38031387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 374 - 570
Target Start/End: Complemental strand, 23758066 - 23757869
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaa-ttcgatccaattttgat 472  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||  ||||||||||||||||||| || || ||||||||||||||    
T  23758066 ttaatttatttcttttattcaatttagtctcataagttttaactttctcaaacacgtcccttaacttatttcttttattaaattttgatccaattttgat 23757967  T
Q  473 acttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
    | ||||||||| |         ||| | ||| || ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  23757966 aattttaatcctccaaaaaaagagaccgttgaattacggaggtctatcagattttatggtgtatcaccaacacctaatttatttactttcttcttctt 23757869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 370 - 554
Target Start/End: Complemental strand, 17357962 - 17357778
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||||||||||||||  |||||||||||    
T  17357962 tcccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatatgatccaatttt 17357863  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttat 554  Q
    |||| |||||||| |||        ||| | ||| || ||| ||||||| ||||||||||||||||||| ||| || ||||||||    
T  17357862 gataattttaatctcctgaaaaaagagaccgttgaattacggaggtctaccagattttataatgtatcagcaatacttaatttat 17357778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 374 - 570
Target Start/End: Complemental strand, 48501418 - 48501223
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||||||| ||| ||||||||||||||||||||||||| | || |||||| |||    
T  48501418 ttaacttatttcttttattcaattaggtttcataattcttaactttctcaaacatgtcctttaacttatttcttttattcaatttggtctaattttaata 48501319  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
     ||||||||||||        ||| | || ||| ||| |||||| |||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  48501318 -ttttaatcccctaaaaaaagagaccgttagattacggaggtctgtcagattttattgtgtatcatcaacacctaatttatttactttcttcttctt 48501223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 370 - 588
Target Start/End: Complemental strand, 10804294 - 10804076
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||||||||  |||||| |||||||||| ||| | ||   |||||||||||||||||||||||| | | |||||||    
T  10804294 tcccttaacttatttcttttattcaatttggtcctataagttttaactttcttaaataagttccttaacttatttcttttattcaatttggttcaatttt 10804195  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||| ||        ||| | |||||| ||| ||||||||||||||||| | ||||||| |||| ||||||||||||||||||||| |||    
T  10804194 gataattttaatccactaaaaaaaaagaccgttggattacggaggtctatcagattttacagtgtatcatcaacgcctaatttatttactttcttcatct 10804095  T
Q  570 ttttccctcatattcatct 588  Q
    | ||| ||||| |||||||    
T  10804094 tcttctctcatcttcatct 10804076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 372 - 601
Target Start/End: Original strand, 48499385 - 48499613
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttga 471  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |||  ||||||||||| |||||||||||| | |||||||||||    
T  48499385 ccttaacttatttcttttattcaatttggtcccataattcttaactttttcaaacatgtcccttaacttatttattttattcaatttggtccaattttga 48499484  T
Q  472 tacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttcttt 571  Q
    || ||||||||||||        ||||| |||||| ||  |||||||||||||||||   ||||||||||||| ||||||| |||||||| ||| ||||     
T  48499485 taattttaatcccctaaaaaaagagatcgttggattacagaggtctatcagattttacggtgtatcaccaacatctaattt-tttactttattcatcttc 48499583  T
Q  572 ttccctcatattcatctacattcatccttc 601  Q
    ||||  ||| ||||||| | |||| |||||    
T  48499584 ttcctccatcttcatcttctttcaaccttc 48499613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 374 - 570
Target Start/End: Complemental strand, 5433502 - 5433306
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||||||| ||   ||||||||||| ||||||||||||   |||||||||||||    
T  5433502 ttaacttatttcttttattcaatttggtcctataagttttaactttctcaaacatgtgccttaacttatttattttattcaatttactccaattttgata 5433403  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
     ||||||| ||||        |||   ||| || ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  5433402 attttaataccctaaaaattgagactgttgtattacggaggtctatcagattttataatgtatcacaaacacctaatttatttaatttcttcttctt 5433306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 668 - 794
Target Start/End: Complemental strand, 48081196 - 48081067
Alignment:
Q  668 ttttgttatacaaagtggagtatataataatcaacaatta---aaaacaatcttttaatagtgattgaattgaatcaaacaagcatttcacaaaaccagc 764  Q
    |||||||||||| ||||||||||| || ||||||||||||   |||||||||||||||  ||||||||||||||||||||||||||||||||||| |||     
T  48081196 ttttgttatacacagtggagtatacaagaatcaacaattacagaaaacaatcttttaacggtgattgaattgaatcaaacaagcatttcacaaaaacagt 48081097  T
Q  765 aacaataactccttaacttcaacaaccatg 794  Q
    ||||||||||||||||||||||||||||||    
T  48081096 aacaataactccttaacttcaacaaccatg 48081067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 370 - 570
Target Start/End: Original strand, 8814154 - 8814357
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||| |||||||||||| |||  |||||||||||||||||||||||| | || ||||||    
T  8814154 tcccttaacttatttcttttattcaatttagtcccataaatcttatctttctcaaacatgtcccttaacttatttcttttattcaatttggtcgaatttt 8814253  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaattt----atttactttcttc 565  Q
    |||| ||||||| ||||       ||||   |||||| ||| ||||||||||||||||||| |||| ||||||||||||||||    |||||||||||||    
T  8814254 gataattttaataccctaaaaaa-tagactgttggattacggaggtctatcagattttatagtgtaacaccaacacctaatttatttatttactttcttc 8814352  T
Q  566 ttctt 570  Q
    |||||    
T  8814353 ttctt 8814357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 370 - 486
Target Start/End: Complemental strand, 35193295 - 35193179
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||| | |||| ||||    
T  35193295 tcccttaatttatttcttttattcaatttggtctcataaaacttaactttctcaaacacgtcctttaacttatttcttttattcaatttggtccattttt 35193196  T
Q  470 gatacttttaatcccct 486  Q
    |||| ||||||||||||    
T  35193195 gataattttaatcccct 35193179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 370 - 486
Target Start/End: Original strand, 56233743 - 56233859
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||  |||||||||||||||||||||||| | |||||||||    
T  56233743 tcccttaacttatttcttttattcaatttggtcgcataagtctcaactttctcaaacatgtcccttaacttatttcttttattcaatttggtccaatttt 56233842  T
Q  470 gatacttttaatcccct 486  Q
    |||| ||||||||||||    
T  56233843 gataattttaatcccct 56233859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 330 - 447
Target Start/End: Complemental strand, 48081669 - 48081552
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacg 429  Q
    |||||||||||| |||||||| |||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48081669 attcaatttggttccataagtcttaactttttcaaatatgtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacg 48081570  T
Q  430 tcatttaacttatttctt 447  Q
    ||  |||| |||||||||    
T  48081569 tcccttaagttatttctt 48081552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 370 - 486
Target Start/End: Original strand, 35191836 - 35191952
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||   | |||||||    
T  35191836 tcccttaacttatttcttttattcaatttggtttcataagtcttaactttctcaaacacgttcattaacttatttcttttattcaatttagttcaatttt 35191935  T
Q  470 gatacttttaatcccct 486  Q
    |||| ||||||||||||    
T  35191936 gataattttaatcccct 35191952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 371 - 597
Target Start/End: Complemental strand, 36074892 - 36074666
Alignment:
Q  371 cccttaacttatttcttttattcaatttggtctcataagtcttaact-ttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||| ||||||| ||||||||||||| ||| ||||| | |||||| ||||||| |||||   ||||||||||| |||||||||||| | || ||||||    
T  36074892 cccttatcttatttattttattcaatttagtcccataaattttaactcttctcaagcacgttccttaacttattttttttattcaatttggtctaatttt 36074793  T
Q  470 g-atacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
      ||| |||||||| | |        ||||| |||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||| |||||    
T  36074792 ttatatttttaatctcataaaaaa--agatcgttggattacgaaggtctatcatattttatagtgtatcaccaacacctaatttatttaatttcctcttc 36074695  T
Q  569 tttttccctcatattcatctacattcatc 597  Q
    || ||||||||| |||||||| |||||||    
T  36074694 ttcttccctcatcttcatctaaattcatc 36074666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 10802889 - 10803000
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    |||||||||||||||||| |  |||||||||        ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  10802889 ggcttaattgatctgccgatcccttaacttatttcttttattcaatttggtcccataaattttaactttctcaaacacgtcccttaacttatttctttta 10802988  T
Q  391 ttcaatttggtc 402  Q
    ||||||||||||    
T  10802989 ttcaatttggtc 10803000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 289 - 402
Target Start/End: Complemental strand, 7261663 - 7261550
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    |||||||||||||||| |||||  |||||||||        |||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||    
T  7261663 taggcttaattgatctaccggtcccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcccttaacttatttcttt 7261564  T
Q  389 tattcaatttggtc 402  Q
    ||||||||||||||    
T  7261563 tattcaatttggtc 7261550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 452 - 570
Target Start/End: Complemental strand, 35927133 - 35927015
Alignment:
Q  452 tcaattcgatccaattttgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatt 551  Q
    |||||| ||||||||||||||| |||||||| |||        ||||| |||||| ||||||||||| ||||||||||| ||||||||||||||||||||    
T  35927133 tcaatttgatccaattttgataattttaatctcctaaaaaaaaagatcgttggattacgaaggtctaccagattttatagtgtatcaccaacacctaatt 35927034  T
Q  552 tatttactttcttcttctt 570  Q
    |||||||||||||||||||    
T  35927033 tatttactttcttcttctt 35927015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 373 - 457
Target Start/End: Original strand, 48080292 - 48080376
Alignment:
Q  373 cttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaatt 457  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  48080292 cttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaacttgtcctttaacttatttcttttattcaatt 48080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 287 - 402
Target Start/End: Original strand, 38031164 - 38031279
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  ||||| |||        |||||||||||||| |||||| ||||||||||||||||| |||||||||| ||||||    
T  38031164 tttaggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttct 38031263  T
Q  387 tttattcaatttggtc 402  Q
    ||||||||||||||||    
T  38031264 tttattcaatttggtc 38031279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 288 - 402
Target Start/End: Original strand, 22621864 - 22621978
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    |||||||||||||||||||| ||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| |||||| |||||||||||    
T  22621864 ttaggcttaattgatctgccagtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctttacttatttctt 22621963  T
Q  388 ttattcaatttggtc 402  Q
    |||||||||||||||    
T  22621964 ttattcaatttggtc 22621978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 294 - 396
Target Start/End: Complemental strand, 17357978 - 17357876
Alignment:
Q  294 ttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattc 393  Q
    |||||||||||||||||  |||||||||        |||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  17357978 ttaattgatctgccggtcccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacacgtcccttaacttatttcttttattc 17357879  T
Q  394 aat 396  Q
    |||    
T  17357878 aat 17357876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 512 - 582
Target Start/End: Complemental strand, 48081524 - 48081454
Alignment:
Q  512 aggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatat 582  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48081524 aggtctttcagagtttataatgtatcaccaacacctaatttatttactttcttcttcttttttcctcatat 48081454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 34121318 - 34121387
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaact 439  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  34121318 tcccttaatttatttcttttattcaatttggtctcataagtcttaactttctcaaacacatcacttaact 34121387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 289 - 401
Target Start/End: Complemental strand, 10804315 - 10804203
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||||||  |||||||||        |||||||||||||| ||||||||||||||||| ||| |  | |||||||||||||||||    
T  10804315 taggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataagttttaactttcttaaataagttccttaacttatttcttt 10804216  T
Q  389 tattcaatttggt 401  Q
    |||||||||||||    
T  10804215 tattcaatttggt 10804203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 22623222 - 22623150
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  22623222 attcaatttggtcccataagtcttaactttctcaagcacgtccctttacttatttcttttattcaatttggtc 22623150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 34095738 - 34095666
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  34095738 attcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttgttcaatttggtc 34095666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 38032538 - 38032427
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  ||||| |||        |||||||||||||  |||||| ||||||||||||||||| |||||||||| ||||||||||    
T  38032538 ggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaactgatttctttta 38032439  T
Q  391 ttcaatttggtc 402  Q
    ||||||||||||    
T  38032438 ttcaatttggtc 38032427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 370 - 457
Target Start/End: Complemental strand, 48081689 - 48081602
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaatt 457  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||| ||||| | |||  ||||||||||||||||||||||||    
T  48081689 tcccttaacttattccttttattcaatttggttccataagtcttaactttttcaaatatgtcccttaacttatttcttttattcaatt 48081602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 292 - 398
Target Start/End: Complemental strand, 23758088 - 23757982
Alignment:
Q  292 gcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttat 391  Q
    ||||||||||||||||||||  |||| |||        ||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23758088 gcttaattgatctgccggttctttaatttatttcttttattcaatttagtctcataagttttaactttctcaaacacgtcccttaacttatttcttttat 23757989  T
Q  392 tcaattt 398  Q
    | |||||    
T  23757988 taaattt 23757982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 48463083 - 48463025
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacac 428  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  48463083 tcccttaacttatttcttttattcaatttggtctcataagttttaactttctcaaacac 48463025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 8815436 - 8815364
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| ||||||| ||||||    
T  8815436 attcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttctattcaaattggtc 8815364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 56233763 - 56233835
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||| ||||||| | ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  56233763 attcaatttggtcgcataagtctcaactttctcaaacatgtcccttaacttatttcttttattcaatttggtc 56233835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 34122901 - 34122843
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacac 428  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  34122901 tcccttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaacac 34122843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 289 - 379
Target Start/End: Complemental strand, 48463104 - 48463014
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||||| |||  |||||||||        ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48463104 taggcttaattgatctgctggtcccttaacttatttcttttattcaatttggtctcataagttttaactttctcaaacacatcccttaact 48463014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 17356360 - 17356469
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||| ||||  |||||||||        |||||||||| | ||| || | ||||||||||||||||| ||||||||||||||||||||    
T  17356360 aggcttaattgatctgtcggtcccttaacttatttcttttattcaatttgatgccagaaatcttaactttctcaaacacgtcccttaacttatttctttt 17356459  T
Q  390 attcaatttg 399  Q
    ||||||||||    
T  17356460 attcaatttg 17356469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 501 - 586
Target Start/End: Original strand, 35925841 - 35925926
Alignment:
Q  501 ttggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcat 586  Q
    |||||| ||| || |||||||||||||||| ||||||  ||||||||||||||||||||||||||||||| | ||||||| |||||    
T  35925841 ttggattacggagatctatcagattttatagtgtatcgtcaacacctaatttatttactttcttcttcttctcccctcatcttcat 35925926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 403
Target Start/End: Complemental strand, 56235099 - 56235026
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtct 403  Q
    |||||||||| || ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| |||||    
T  56235099 attcaatttgatctcataagtcttaactttatcaaacacaccccttaacttatttcttttattcaattcggtct 56235026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 330 - 398
Target Start/End: Complemental strand, 5433486 - 5433418
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaattt 398  Q
    |||||||||||||| |||||||||||||||||||||||  | ||||||||||||| |||||||||||||    
T  5433486 attcaatttggtcctataagttttaactttctcaaacatgtgccttaacttatttattttattcaattt 5433418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 8814174 - 8814246
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||| ||||||||| | ||| ||||||||||||  |||||||||||||||||||||||||||||||||    
T  8814174 attcaatttagtcccataaatcttatctttctcaaacatgtcccttaacttatttcttttattcaatttggtc 8814246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 288 - 384
Target Start/End: Complemental strand, 34122923 - 34122827
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttattt 384  Q
    |||||||||||||||||| ||||  |||||||||        ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  34122923 ttaggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaacacatcccttaactcattt 34122827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 35193275 - 35193203
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||| |||||   ||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  35193275 attcaatttggtctcataaaacttaactttctcaaacacgtcctttaacttatttcttttattcaatttggtc 35193203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 48499403 - 48499475
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||||||||| | |||||||| |||||||  ||||||||||||||| |||||||||||||||||    
T  48499403 attcaatttggtcccataattcttaactttttcaaacatgtcccttaacttatttattttattcaatttggtc 48499475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 515 - 587
Target Start/End: Complemental strand, 48081334 - 48081265
Alignment:
Q  515 tctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatc 587  Q
    ||||| ||| |||||| ||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  48081334 tctatgagagtttatactgtatcaccaacacctaatttatttactttct---tctttttccctcatattcatc 48081265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 330 - 398
Target Start/End: Original strand, 35191856 - 35191924
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaattt 398  Q
    ||||||||||||  ||||||| ||||||||||||||||| | | |||||||||||||||||||||||||    
T  35191856 attcaatttggtttcataagtcttaactttctcaaacacgttcattaacttatttcttttattcaattt 35191924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 330 - 403
Target Start/End: Complemental strand, 36074873 - 36074799
Alignment:
Q  330 attcaatttggtcccataagttttaact-ttctcaaacacatcccttaacttatttcttttattcaatttggtct 403  Q
    ||||||||| ||||||||| |||||||| ||||||| ||| | ||||||||||||| ||||||||||||||||||    
T  36074873 attcaatttagtcccataaattttaactcttctcaagcacgttccttaacttattttttttattcaatttggtct 36074799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 379
Target Start/End: Original strand, 34121298 - 34121387
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||||||||  ||||| |||        ||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  34121298 aggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtctcataagtcttaactttctcaaacacatcacttaact 34121387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 288 - 397
Target Start/End: Original strand, 48080267 - 48080376
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    |||||||||||||||||| ||||  |||||||||        ||| ||||||||  ||||||| |||||||||||||||   ||| ||||||||||||||    
T  48080267 ttaggcttaattgatctgtcggtcacttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaacttgtcctttaacttatttctt 48080366  T
Q  388 ttattcaatt 397  Q
    ||||||||||    
T  48080367 ttattcaatt 48080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 403
Target Start/End: Complemental strand, 48501402 - 48501329
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtct 403  Q
    |||||||| |||  ||||| | ||||||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  48501402 attcaattaggtttcataattcttaactttctcaaacatgtcctttaacttatttcttttattcaatttggtct 48501329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 521 - 586
Target Start/End: Original strand, 56233878 - 56233943
Alignment:
Q  521 agattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcat 586  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||| | || |||||| |||||    
T  56233878 agattttatagtgtatcgccaacacctaatttatttactttcttcttcctctttcctcatcttcat 56233943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 501 - 601
Target Start/End: Complemental strand, 34122789 - 34122690
Alignment:
Q  501 ttggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatcctt 600  Q
    |||||||| | || |||||||||| ||||| |||||||||||||| | ||||||||||||||||| | || ||| | ||| ||||||| |||||||||||    
T  34122789 ttggataagggagatctatcagatcttatagtgtatcaccaacacttgatttatttactttcttcatgttcttctc-catcttcatcttcattcatcctt 34122691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 30496002 - 30495887
Alignment:
Q  59 gaaaatgttaaggttaatttgaaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaatttttgtgttaaaatacaatagcggatc 158  Q
    |||| ||||| |||||||  |||||||||| | || ||| |||| |||||| ||| |||||||||||||| |||||  ||||||||||||||||  |||     
T  30496002 gaaattgttagggttaatccgaaatccccagagtgtccttaaaacagttttaaaattagggtcaatttgggattttcctgttaaaatacaatagtagata 30495903  T
Q  159 cgaatccgctacccgc 174  Q
     ||||||| |||||||    
T  30495902 agaatccgatacccgc 30495887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 788 - 829
Target Start/End: Complemental strand, 48080526 - 48080485
Alignment:
Q  788 aaccatggcagcatcttctctaacatcctcattctactcatt 829  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  48080526 aaccatggcatcatcttctctaacatcctcattctactcatt 48080485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 290 - 398
Target Start/End: Original strand, 18091579 - 18091687
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    ||||||||||||||||||| |  |||||||||        ||| ||||||||  ||||||| |||||||||||||| || ||| ||||||||| | ||||    
T  18091579 aggcttaattgatctgccgatcccttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaaaacgtccattaacttatctatttt 18091678  T
Q  390 attcaattt 398  Q
    |||||||||    
T  18091679 attcaattt 18091687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 495 - 562
Target Start/End: Original strand, 48462266 - 48462333
Alignment:
Q  495 agatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttc 562  Q
    |||||||||||||| | || ||||||| || ||||| |||||||||||||  | ||||||||||||||    
T  48462266 agatcattggataagggagatctatcatatcttatagtgtatcaccaacatttgatttatttactttc 48462333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 565
Target Start/End: Complemental strand, 48462957 - 48462907
Alignment:
Q  515 tctatcagattttataatgtatcaccaacacctaatttatttactttcttc 565  Q
    |||||||||| ||||| ||||||| |||||| | |||||||||||||||||    
T  48462957 tctatcagatcttatactgtatcatcaacacatgatttatttactttcttc 48462907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 5e-71; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 372 - 601
Target Start/End: Original strand, 17244196 - 17244425
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttga 471  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  ||||||||||||||| |||||||| | |||||||||||    
T  17244196 ccttaacttatttcttttattcaatttggtcccataagtctcaactttctcaaacacgtcccttaacttatttctttgattcaatttggtccaattttga 17244295  T
Q  472 tacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttcttt 571  Q
    || |||||||| |||        ||| | |||||| ||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||     
T  17244296 taattttaatctcctaaaaaaagagaccgttggattacggaggtctatcagattttataatgtatcaccgatacctaatttatttactttcttcttcttc 17244395  T
Q  572 ttccctcatattcatctacattcatccttc 601  Q
    ||||||||| ||||||||||||||||||||    
T  17244396 ttccctcatcttcatctacattcatccttc 17244425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 370 - 593
Target Start/End: Original strand, 51468358 - 51468581
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| | |||||||||    
T  51468358 tcccttaacttattttttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaatttt 51468457  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
     ||| ||||||||||||        ||||   ||||| ||| ||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||    
T  51468458 aataattttaatcccctaaaaaaaaagattgatggattacggaggtctatcagattttatagtgtatcaccaacacccaatttatttacttttttcttct 51468557  T
Q  570 ttttccctcatattcatctacatt 593  Q
    | ||||||||| ||||||||||||    
T  51468558 tcttccctcatcttcatctacatt 51468581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 372 - 601
Target Start/End: Complemental strand, 7111572 - 7111343
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttga 471  Q
    |||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||| ||||||||||||||||| | |||||||||||    
T  7111572 ccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtccattaactgatttcttttattcaatttggtccaattttga 7111473  T
Q  472 tacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttcttt 571  Q
    || ||||||||||||        ||| | |||||| ||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||     
T  7111472 taattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttcttcttc 7111373  T
Q  572 ttccctcatattcatctacattcatccttc 601  Q
    |||| |||| ||||||| ||||||||||||    
T  7111372 ttccatcatcttcatctccattcatccttc 7111343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 370 - 570
Target Start/End: Original strand, 51693166 - 51693366
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | | |||||||    
T  51693166 tcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcctttaacttatttcttttattcaatttggttcaatttt 51693265  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||| ||||        ||| | |||||| ||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  51693266 gataattttaataccctaaaaaaagagaccgttggattacggaggtctatcggattttatagtgtatcaccaacacctaatttatttactttcttcttct 51693365  T
Q  570 t 570  Q
    |    
T  51693366 t 51693366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 45229702 - 45229474
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  45229702 tcccttaatttatttcttttattcaatttggtctcataaatcttaattttctcaaacacgtcccttaacttatttcttttattcaatttgatccaatttt 45229603  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| |||||||||  |        ||||  |||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||     
T  45229602 gataattttaatcctataaaaaaaaagattgttggattacggaggtctatcagattttataatggatcaccaacacctaatttatttagtttcttgttc- 45229504  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
      |||| |||| ||||||||||||||||||||    
T  45229503 --ttccttcatcttcatctacattcatccttc 45229474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 369 - 601
Target Start/End: Original strand, 52759381 - 52759613
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattt 468  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||  ||||||||| | ||||||||||||   ||||||||    
T  52759381 atcccttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaaaacgtccattaacttatctattttattcaatttagtccaattt 52759480  T
Q  469 tgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
    ||||| |||||||| | |        ||| | ||| || ||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  52759481 tgataattttaatctcttaaaaaatgagaccgttgaattacagaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttc 52759580  T
Q  569 tttttccctcatattcatctacattcatccttc 601  Q
    || ||||||||| ||||||||| ||||| ||||    
T  52759581 ttcttccctcatcttcatctaccttcattcttc 52759613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 51469000 - 51468769
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||| ||||||||||||||||| ||||| |||||||||| |||||||||||  | |||||||||||| ||||||||| | |||||||||    
T  51469000 tcccttaacttattttttttattcaatttggtcccataaatcttaactttttcaaacacgtccctaaacttatttcttctattcaatttggtccaatttt 51468901  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
     ||| ||||||||||||        | | |||||||| ||| || ||||| |||||||| | ||||||||||||||||||||||||||||||||||||||    
T  51468900 aataattttaatcccctaaaaaaaaaaagcattggattacggagatctattagattttacagtgtatcaccaacacctaatttatttactttcttcttct 51468801  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | |||| |||| |||||||||||| |||||||    
T  51468800 tcttccatcatcttcatctacatttatccttc 51468769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 370 - 552
Target Start/End: Complemental strand, 50485095 - 50484913
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| | |||||||||    
T  50485095 tcccttaacttatttcatttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaatttt 50484996  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaattt 552  Q
    |||| ||||||||||||        ||| |||||||| ||  ||||||||||||||||| | |||||||||||||||||||||    
T  50484995 gataattttaatcccctaaaaaaagagaccattggattacataggtctatcagattttacagtgtatcaccaacacctaattt 50484913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 370 - 570
Target Start/End: Original strand, 7110245 - 7110445
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| |||||||||||||| |||||||||  |||||||||||||||||||||||||||  |||||| ||||||||||||||||| | |||||||||    
T  7110245 tcccttaatttatttcttttatttaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaatttt 7110344  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||||| ||||||  || ||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||    
T  7110345 gataattttaatcccctaaaaaaagagatcgttggattgcggaggtctatcagattttatagtgtatcatcaacgcctaatttatttactttcttcttct 7110444  T
Q  570 t 570  Q
    |    
T  7110445 t 7110445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 38235248 - 38235018
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||| |||| | |||||||||    
T  38235248 tcccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttggtccaatttt 38235149  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
     |||  |||||| |||         | | | |||||| ||||| |||||| |||||||| | ||||||||||||||||||||||||||||||||||||||    
T  38235148 aataagtttaat-cccaaaaaaaacaaaccgttggattacgaatgtctataagattttacagtgtatcaccaacacctaatttatttactttcttcttct 38235050  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | ||||||||| |||||||||| |||||||||    
T  38235049 tcttccctcatcttcatctacactcatccttc 38235018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 369 - 556
Target Start/End: Complemental strand, 5488967 - 5488780
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattt 468  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||   |||||||||||||||||||||||| | ||||||||    
T  5488967 atcccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgttcattaacttatttcttttattcaatttggtccaattt 5488868  T
Q  469 tgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttattt 556  Q
    ||||| |||||||||| |        ||| | |||||| ||| |||||||||| |||||||| |||||||||||||||||||||||||    
T  5488867 tgataattttaatcccttagaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcaccaacacctaatttattt 5488780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 374 - 601
Target Start/End: Original strand, 45228298 - 45228525
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    ||||||||||||||||||| ||||| ||| ||||| | ||||| || ||||||||||  ||||||||||||||||||||||||| | ||||||||| |||    
T  45228298 ttaacttatttcttttatttaattttgtcccataaattttaaccttatcaaacacgttctttaacttatttcttttattcaatttggtccaattttaata 45228397  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttcttttt 573  Q
     ||||||||||||        ||| | |||||| ||| || ||||||| |||||||| |||||||| ||| | |||||||||||||||||||||||| ||    
T  45228398 attttaatcccctaaaaaaagagaccgttggattacggagatctatcaaattttatagtgtatcacaaacgcttaatttatttactttcttcttcttctt 45228497  T
Q  574 ccctcatattcatctacattcatccttc 601  Q
    ||||||| ||||||||||||||||||||    
T  45228498 ccctcatcttcatctacattcatccttc 45228525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 370 - 552
Target Start/End: Original strand, 5488520 - 5488702
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| ||||||||||||||||||||| |  |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  5488520 tcccttaatttatttcttttattcaatttgattccataagacttaactttctcaaacacgtcctttaacttatttcttttattcaatttgatccaatttt 5488619  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaattt 552  Q
    |||| |||||||||| |        ||| | |||||| ||| ||||||||||||||||||| |||||||||||||| ||||||    
T  5488620 gataattttaatcccttagaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacgtaattt 5488702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 370 - 567
Target Start/End: Original strand, 52086646 - 52086841
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||||||||||||||||   |||||||||    
T  52086646 tcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttcttttattcaatttagtccaatttt 52086745  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttctt 567  Q
     ||| ||||||||||||        | | | |||||| |||||||||||| | |||||||| |||||||||| |||||||||| ||||||||||||||    
T  52086746 aataattttaatcccctaaaaaa--aaaccgttggattacgaaggtctataaaattttatagtgtatcaccatcacctaatttttttactttcttctt 52086841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 373 - 564
Target Start/End: Complemental strand, 52087870 - 52087679
Alignment:
Q  373 cttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgat 472  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||||||||    
T  52087870 cttaacttatttcttttattcaatttggtctcatatgtcttaactttctcaaacacgtcctttcacttatttcttttattcaatttgattcaattttgat 52087771  T
Q  473 acttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttctt 564  Q
    | ||||| ||||||        ||| | ||| || ||| |||||||||| ||||||   ||||||||||||| |||||||||||| ||||||    
T  52087770 aattttagtcccctaaaaaaagagaccgttgaattacggaggtctatcaaattttacggtgtatcaccaacatctaatttatttaatttctt 52087679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 370 - 550
Target Start/End: Complemental strand, 1823391 - 1823215
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||   ||||||||| |||  ||||||||||| |||||||||||| |||||||||||    
T  1823391 tcccttaacttatttcttttattcaatttagtcacataagtcttaa---tctcaaacatgtcgcttaacttattt-ttttattcaatttgatccaatttt 1823296  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaat 550  Q
    |||| ||||||||  ||       || | | |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  1823295 gataattttaatcttctaaaaagataaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaat 1823215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 377 - 549
Target Start/End: Original strand, 40187629 - 40187800
Alignment:
Q  377 acttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgatactt 476  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||  ||||||||||||||||| |||||| | ||||||||| ||| ||    
T  40187629 acttatttcttttattcaatttggtcccataagtcttaactttatcaaacatgtc-cttaacttatttcttttactcaatttggtccaatttttataatt 40187727  T
Q  477 ttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaa 549  Q
    ||||||||||        ||| | |||||| ||| ||||||||||||||||||  ||||||||||||||||||    
T  40187728 ttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatcgtgtatcaccaacacctaa 40187800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 374 - 568
Target Start/End: Original strand, 50483533 - 50483727
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||| | ||||||||| |||    
T  50483533 ttaacttatttcttgtattcaatttggtctcataagtcttaattttcttaaaaacgtcatttaatttatttcttttattcaatttggtccaatttttata 50483632  T
Q  474 cttttaatcccct-nnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
     ||||| ||||||         |||   |||||| ||| | ||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||    
T  50483633 attttactcccctaaaaaaaagagactgttggattacggaagtcta-cagattttatcgtgtataaccaacacctaatttatttactttcttcttc 50483727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 434 - 601
Target Start/End: Complemental strand, 52761631 - 52761467
Alignment:
Q  434 ttaacttatttcttttattcaattcgatccaattttgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatg 533  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||||||||||        ||| | ||||||  || ||||||||||||||||||| ||    
T  52761631 ttaacttatttcttttattcaatttggtccaattttgataattttaatcccctgaaaaaagagaccgttggattgcggaggtctatcagattttatagtg 52761532  T
Q  534 tatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    |||||||||||||||||||||||||||||| ||||   |||| |||| ||||||| ||||||||||||    
T  52761531 tatcaccaacacctaatttatttactttctccttc---ttccatcatcttcatcttcattcatccttc 52761467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 52086623 - 52086734
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  |||||||||        ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  52086623 tttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttct 52086722  T
Q  387 tttattcaattt 398  Q
    ||||||||||||    
T  52086723 tttattcaattt 52086734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 372 - 549
Target Start/End: Original strand, 18819283 - 18819460
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttga 471  Q
    |||||| |||||| |||||||||||||| || ||||||||||||||||||||| ||||||  |||| ||||||||||||||||||| |  |||||||| |    
T  18819283 ccttaaattattttttttattcaatttgatcccataagtcttaactttctcaatcacgtcccttaatttatttcttttattcaatttggcccaattttaa 18819382  T
Q  472 tacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaa 549  Q
    || ||||||||||||        | | | |||||| ||| |||| |||||||||||||| ||||||||||||||||||    
T  18819383 taattttaatcccctatgaaaagaaaccgttggattacggaggtatatcagattttatagtgtatcaccaacacctaa 18819460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 51468339 - 51468450
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  51468339 ggcttaattgatctgccggtcccttaacttattttttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttctttta 51468438  T
Q  391 ttcaatttggtc 402  Q
    ||||||||||||    
T  51468439 ttcaatttggtc 51468450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 287 - 401
Target Start/End: Original strand, 51693143 - 51693257
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||| ||||  |||||||||        ||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  51693143 tttaggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcctttaacttatttct 51693242  T
Q  387 tttattcaatttggt 401  Q
    |||||||||||||||    
T  51693243 tttattcaatttggt 51693257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 373 - 587
Target Start/End: Complemental strand, 47533950 - 47533736
Alignment:
Q  373 cttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgat 472  Q
    ||||| |||||||||||||| ||||| ||| ||||||| |||||||| ||||| |||||  |||| ||||||| || |||||||| ||| ||||||||||    
T  47533950 cttaaattatttcttttatttaatttagtcccataagttttaactttttcaaatacgtctcttaaattatttcattcattcaatttgattcaattttgat 47533851  T
Q  473 acttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttt 572  Q
    | || |||||| |        |||| | ||  || |   || |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |    
T  47533850 aattataatcctccaaaaaaatagaccgttaaattagagagatctatcagattttatagtgtatcaccaacacctaatttatttactttcttcatcttct 47533751  T
Q  573 tccctcatattcatc 587  Q
    ||| |||| ||||||    
T  47533750 tccatcatcttcatc 47533736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 501 - 601
Target Start/End: Original strand, 21203161 - 21203261
Alignment:
Q  501 ttggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatcctt 600  Q
    |||||| || |||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||| ||  ||||| |||||||||||||||||||    
T  21203161 ttggattacaaaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttattcttcttttctcatcttcatctacattcatcctt 21203260  T
Q  601 c 601  Q
    |    
T  21203261 c 21203261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 370 - 482
Target Start/End: Original strand, 47532976 - 47533088
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| |||||| ||||||||||||||||||||||| |||||||||| ||||||||||   |||| ||||||| ||||||||||| ||| |||||||    
T  47532976 tcccttaagttattttttttattcaatttggtctcataaatcttaactttatcaaacacgttccttaaattatttcatttattcaatttgattcaatttt 47533075  T
Q  470 gatacttttaatc 482  Q
    |||| ||||||||    
T  47533076 gataattttaatc 47533088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 372 - 483
Target Start/End: Complemental strand, 17245761 - 17245651
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttga 471  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||  ||||||||||| ||||||| |||| | |||||||||||    
T  17245761 ccttaatttatttcttttattcaatttggtctcataagtcttaactctctcaaacaagtcccttaacttattt-ttttattaaatttggtccaattttga 17245663  T
Q  472 tacttttaatcc 483  Q
    |  |||||||||    
T  17245662 tcattttaatcc 17245651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 297 - 402
Target Start/End: Complemental strand, 50485108 - 50485003
Alignment:
Q  297 attgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaat 396  Q
    ||||||||||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  50485108 attgatctgccggtcccttaacttatttcatttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaat 50485009  T
Q  397 ttggtc 402  Q
    ||||||    
T  50485008 ttggtc 50485003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 370 - 446
Target Start/End: Original strand, 25181520 - 25181596
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttct 446  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  25181520 tcccttaacttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaacttatttct 25181596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 17244175 - 17244286
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||| | ||||||||| |||||||||        ||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| |    
T  17244175 ggcttaattaacctgccggttccttaacttatttcttttattcaatttggtcccataagtctcaactttctcaaacacgtcccttaacttatttctttga 17244274  T
Q  391 ttcaatttggtc 402  Q
    ||||||||||||    
T  17244275 ttcaatttggtc 17244286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 290 - 400
Target Start/End: Original strand, 18819261 - 18819371
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||| ||||| |||        |||||||||| |||||||||| ||||||||||||| ||| |||||||| |||||||||||    
T  18819261 aggcttaattgatctgccggttccttaaattattttttttattcaatttgatcccataagtcttaactttctcaatcacgtcccttaatttatttctttt 18819360  T
Q  390 attcaatttgg 400  Q
    |||||||||||    
T  18819361 attcaatttgg 18819371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 7110225 - 7110337
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||  ||||| |||        ||| |||||||||| |||||| ||||||||||||||||| |||||||||| |||||||||    
T  7110225 aggcttaattgatctgccggtcccttaatttatttcttttatttaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttctttt 7110324  T
Q  390 attcaatttggtc 402  Q
    |||||||||||||    
T  7110325 attcaatttggtc 7110337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 5488946 - 5488874
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||| ||||||||||| ||||||||||||||||| | | |||||||||||||||||||||||||||||    
T  5488946 attcaatttagtcccataagtcttaactttctcaaacacgttcattaacttatttcttttattcaatttggtc 5488874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 7111554 - 7111482
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||| |||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  7111554 attcaatttggtcctataagtcttaactttctcaaacacgtccattaactgatttcttttattcaatttggtc 7111482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 38235228 - 38235156
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||  |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  38235228 attcaatttggtcatataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttggtc 38235156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 25181502 - 25181596
Alignment:
Q  292 gcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    |||||||||||||||||||  |||||||||        |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  25181502 gcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaacttatttct 25181596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 45229682 - 45229613
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    ||||||||||||| ||||| | |||| |||||||||||| ||||||||||||||||||||||||||||||    
T  45229682 attcaatttggtctcataaatcttaattttctcaaacacgtcccttaacttatttcttttattcaatttg 45229613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 372 - 556
Target Start/End: Original strand, 1821929 - 1822114
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaactta-tttcttttattcaattcgatccaattttg 470  Q
    |||||| |||||| ||||||||||||| |||  |||| | ||||||||||||||||||||  |||||||| ||| ||||||| ||||   || |||||||    
T  1821929 ccttaatttattttttttattcaattttgtcctataaattttaactttctcaaacacgtcccttaacttatttttttttatttaatttagtctaattttg 1822028  T
Q  471 atacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttattt 556  Q
    ||| |||||||||  |        ||| | |||| | ||||||||||||| ||||||||| |||||||  ||||||||||||||||    
T  1822029 ataattttaatcctttaaaaaaagagaccgttgggttacgaaggtctatctgattttatagtgtatcattaacacctaatttattt 1822114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 51468980 - 51468908
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||||||||| | |||||||| |||||||| ||||| |||||||||||| ||||||||||||||    
T  51468980 attcaatttggtcccataaatcttaactttttcaaacacgtccctaaacttatttcttctattcaatttggtc 51468908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 5488540 - 5488609
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    |||||||||| | |||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  5488540 attcaatttgattccataagacttaactttctcaaacacgtcctttaacttatttcttttattcaatttg 5488609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 18820855 - 18820806
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaacttt 419  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18820855 tcccttaacttatttcttttattcaatttggtctcataaatcttaacttt 18820806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 52087853 - 52087784
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    ||||||||||||| |||| || ||||||||||||||||| ||| || |||||||||||||||||||||||    
T  52087853 attcaatttggtctcatatgtcttaactttctcaaacacgtcctttcacttatttcttttattcaatttg 52087784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 17245783 - 17245672
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||| ||||||| ||||| |||        ||||||||||||| ||||||| |||||| |||||||||  ||||||||||||||| ||||    
T  17245783 aggcttaattgatccgccggttccttaatttatttcttttattcaatttggtctcataagtcttaactctctcaaacaagtcccttaacttattt-tttt 17245685  T
Q  390 attcaatttggtc 402  Q
    ||| |||||||||    
T  17245684 attaaatttggtc 17245672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 40187642 - 40187713
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||||||||||| |||||||| |||||||  | ||||||||||||||||||| |||||||||||    
T  40187642 attcaatttggtcccataagtcttaactttatcaaacatgt-ccttaacttatttcttttactcaatttggtc 40187713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 45228318 - 45228386
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||| ||||||||| ||||||| || |||||||| | | |||||||||||||||||||||||||||||    
T  45228318 aattttgtcccataaattttaaccttatcaaacacgttctttaacttatttcttttattcaatttggtc 45228386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 1821947 - 1822006
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    ||||||||| |||| |||| ||||||||||||||||||| ||||||||||||||| ||||    
T  1821947 attcaattttgtcctataaattttaactttctcaaacacgtcccttaacttatttttttt 1822006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 288 - 402
Target Start/End: Original strand, 50483508 - 50483621
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    |||||||||||||||||| |||| | ||||||||        ||||||||||||| ||||||| |||| ||||| ||| || ||  |||| |||||||||    
T  50483508 ttaggcttaattgatctgtcggtct-ttaacttatttcttgtattcaatttggtctcataagtcttaattttcttaaaaacgtcatttaatttatttctt 50483606  T
Q  388 ttattcaatttggtc 402  Q
    |||||||||||||||    
T  50483607 ttattcaatttggtc 50483621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 540 - 601
Target Start/End: Complemental strand, 17245612 - 17245551
Alignment:
Q  540 caacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    ||||| ||||||||||||||||||||||| | |||| |||| ||||||| ||||||||||||    
T  17245612 caacatctaatttatttactttcttcttcatcttccatcatcttcatcttcattcatccttc 17245551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 47532996 - 47533065
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    ||||||||||||| ||||| | |||||||| |||||||| | |||||| ||||||| |||||||||||||    
T  47532996 attcaatttggtctcataaatcttaactttatcaaacacgttccttaaattatttcatttattcaatttg 47533065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 290 - 398
Target Start/End: Original strand, 52759362 - 52759470
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    ||||||||||||||||||| |  |||||||||        ||| ||||||||  ||||||| |||||||||||||| || ||| ||||||||| | ||||    
T  52759362 aggcttaattgatctgccgatcccttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaaaacgtccattaacttatctatttt 52759461  T
Q  390 attcaattt 398  Q
    |||||||||    
T  52759462 attcaattt 52759470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 293 - 399
Target Start/End: Complemental strand, 47533970 - 47533864
Alignment:
Q  293 cttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttatt 392  Q
    |||||||||||||| ||| |||||| |||        ||| ||||| |||||||||||||||||||| ||||| || || ||||| ||||||| || |||    
T  47533970 cttaattgatctgctggtctcttaaattatttcttttatttaatttagtcccataagttttaactttttcaaatacgtctcttaaattatttcattcatt 47533871  T
Q  393 caatttg 399  Q
    |||||||    
T  47533870 caatttg 47533864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 683 - 746
Target Start/End: Original strand, 36808327 - 36808393
Alignment:
Q  683 tggagtatataataatcaacaattaaa---aacaatcttttaatagtgattgaattgaatcaaacaa 746  Q
    ||||||||| || |||||||||||| |   |||||||||| || |||||||||||||||||||||||    
T  36808327 tggagtatacaagaatcaacaattacacagaacaatctttcaagagtgattgaattgaatcaaacaa 36808393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 545
Target Start/End: Original strand, 47533119 - 47533150
Alignment:
Q  514 gtctatcagattttataatgtatcaccaacac 545  Q
    ||||||||||||||||||||||||||||||||    
T  47533119 gtctatcagattttataatgtatcaccaacac 47533150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 372 - 402
Target Start/End: Complemental strand, 52761633 - 52761603
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||||    
T  52761633 ccttaacttatttcttttattcaatttggtc 52761603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 2e-70; HSPs: 116)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 59 - 290
Target Start/End: Original strand, 4359854 - 4360102
Alignment:
Q  59 gaaaatgttaaggttaatttgaaatccccaaaatgccctgaaaatagttttgaaagtagggtcaatttggaatttttgtgttaaaatacaatagcggatc 158  Q
    |||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  4359854 gaaaatgttagggttaatttgaaatccccaaaatgccctcaaaacagttttgaaagtagggtcaatttgggatttatgtgttaaaatacaatagcggatc 4359953  T
Q  159 cgaatccgctacc--------cgcgaa---------ctgctggagcagtcgctaacctaagttgctcggctcggctcctaccattacttgccactcagct 241  Q
    |||||||||||||        ||||||         |||||||||||||||||||||| |||||||||| |||||||||||||||||||  ||||| |||    
T  4359954 cgaatccgctacccgcctacacgcgaactgctatagctgctggagcagtcgctaacctgagttgctcggatcggctcctaccattactttgcactcggct 4360053  T
Q  242 acaccactatatcgcgctgttgactactctggccataatatacaattta 290  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  4360054 acaccactatattgcgctattgactactctgaccataatatacaattta 4360102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 370 - 595
Target Start/End: Original strand, 52521946 - 52522170
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||| ||| |||||||| |||||||||||| | |||||||||    
T  52521946 tcccttaacttatttctttaattcaatttggtctcatagatcttaactttctcaaacacgtcctttcacttatttattttattcaatttggtccaatttt 52522045  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    ||||  |||||||||||        |||   |||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  52522046 gataactttaatcccctaaaaaaa-agacagttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttct 52522144  T
Q  570 ttttccctcatattcatctacattca 595  Q
    | ||||||||| ||||||||||||||    
T  52522145 tcttccctcatcttcatctacattca 52522170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 370 - 597
Target Start/End: Original strand, 31937054 - 31937284
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  || |||||||| ||||||||| || | |||||||||    
T  31937054 tcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttcacttatttattttattcattttggtccaatttt 31937153  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttact---ttcttct 566  Q
    |||| ||||||||||||        ||| | |||||| ||| ||||||||||||||||||| ||||||||||||||||||||| ||||||   |||||||    
T  31937154 gataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttttttactttcttcttct 31937253  T
Q  567 tctttttccctcatattcatctacattcatc 597  Q
    |||| ||||||||| ||||||||||||||||    
T  31937254 tcttcttccctcatcttcatctacattcatc 31937284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 370 - 597
Target Start/End: Complemental strand, 35759330 - 35759103
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||| ||||||||||||||||||| | |||||||||    
T  35759330 tcccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaatttatttcttttattcaatttggtccaatttt 35759231  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||            ||| | |||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  35759230 gataattttaatctaaaaaaaaaacagaccgttggattacgaatgtctatcagattttacagtgtatcaccaacacctaatttatttactttcttcttct 35759131  T
Q  570 ttttccctcatattcatctacattcatc 597  Q
    | ||||||||| ||||||||||||||||    
T  35759130 tcttccctcatcttcatctacattcatc 35759103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 21727929 - 21728160
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| ||| |||||||    
T  21727929 tcccataacttatttcttttattcaatttggtctcataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttgattcaatttt 21728028  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| |||||||| |||       ||||   || ||| |||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||| |    
T  21728029 gataattttaatctcctaaaaaagtagactgttagattacgaaggtctatctcattttataatgtatcaccaacacctaatttatttaccttcttctttt 21728128  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | |||| |||| ||||||  |||||| |||||    
T  21728129 tcttccttcattttcatcaccattcaaccttc 21728160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 46903723 - 46903495
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| | | |||||||    
T  46903723 tcccttaacttatttcttttattcaatttggtcccataaatcttaagtttttcaaacacgtcctttaacttatttcttttattcaatttggtacaatttt 46903624  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||  ||||||||||||        ||| | |||||| ||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||     
T  46903623 gatgattttaatcccctaaaaaaaaagaccgttggattacggaggtctattagattttatagtgtatcaccaacacctaatttatttactttcttcttc- 46903525  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
      |||| |||| ||||||| ||||||||||||    
T  46903524 --ttccatcattttcatcttcattcatccttc 46903495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 370 - 570
Target Start/End: Complemental strand, 28777786 - 28777586
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||| ||||||||||||||||| | |||||||||    
T  28777786 tcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaatttt 28777687  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||| | |||||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  28777686 gataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactttcttcttct 28777587  T
Q  570 t 570  Q
    |    
T  28777586 t 28777586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 370 - 570
Target Start/End: Complemental strand, 43394153 - 43393952
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaactta-tttcttttattcaattcgatccaattt 468  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||| |||||||||||||| | | ||||||||    
T  43394153 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaagacgtcccttaacttattttcttttattcaaattggtccaattt 43394054  T
Q  469 tgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
    ||||| |||||| |||||        ||| | |||||| ||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  43394053 tgataattttaaccccctaaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaatttatttactttcttcttc 43393954  T
Q  569 tt 570  Q
    ||    
T  43393953 tt 43393952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 46902350 - 46902578
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  |||||||||||||||||||||||| | | |||||||    
T  46902350 tcccttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtgcaatttt 46902449  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||||  || ||| ||| ||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||     
T  46902450 gataattttaatcccctaaaagaagagattgttagattacggaggtctatcagattttatagtgtatcactaacaccaaatttatttactttcttcttc- 46902548  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
      |||| |||  ||||||| ||||||||||||    
T  46902549 --ttccatcaatttcatcttcattcatccttc 46902578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 47431286 - 47431058
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||   |||||||||||||||| ||||||| | |||||||||    
T  47431286 tcccttaatttatttcttttattcaatttggtctcataagttttaactttttcaaacacgttccttaacttatttcttttgttcaatttggtccaatttt 47431187  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||| | |||||| | | |||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||     
T  47431186 gataattttaatcccctaaaaaaagagaccgttggattatggaggtctattagattttatagtgtatcacccacacctaatttatttactttcttcttc- 47431088  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
      |||| |||| ||||||||||||||||||||    
T  47431087 --ttccatcatcttcatctacattcatccttc 47431058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 672 - 856
Target Start/End: Original strand, 50880158 - 50880351
Alignment:
Q  672 gttatacaaagtggagtatataataatcaacaatta---aaaacaatcttttaatagtgattgaattgaatcaaacaagcatttcacaaaaccagcaaca 768  Q
    |||||||| ||||||||||| || ||||||||||||   ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | ||    
T  50880158 gttatacacagtggagtatacaagaatcaacaattacataaaacaatcttttaacagtgattgaattgaatcaaacaagcatttcacaaaaacagtagca 50880257  T
Q  769 ataactccttaacttcaacaaccatggcagcatcttctctaacatcctcattctact------cattcacaacatcccccaaatcttcttacct 856  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||      ||||||||||||||||||||| |||| ||||    
T  50880258 ataacttcttaacttcaacaaccatggcagcatcttctccaacatcctcattctactccttcccattcacaacatcccccaaatattctcacct 50880351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 55209801 - 55210034
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||  |||| |||||||||||||| |||| | |||||||||    
T  55209801 tcccttaacttatttcttttattcaatttggttccataagttttaactttctcaaacacgtcccttaatttatttcttttatttaatttggtccaatttt 55209900  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttact---ttcttct 566  Q
    |||| ||||||||| |         ||| |||||||| ||| |||||||||||| |||||| ||||| ||||||||||||||||||||||   |||||||    
T  55209901 gataattttaatccac-gaaaaaagagaccattggattacggaggtctatcagaatttatagtgtattaccaacacctaatttatttactttattcttct 55209999  T
Q  567 tctttttccctcatattcatctacattcatccttc 601  Q
    |||| ||||||||| ||||||||||||||||||||    
T  55210000 tcttcttccctcatcttcatctacattcatccttc 55210034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 374 - 601
Target Start/End: Original strand, 28776471 - 28776698
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    |||| |||||| |||||||||||||| ||  |||| |||||| ||||||||||| |||  |||||| ||||||||||||||||| | |||||||||||||    
T  28776471 ttaatttattttttttattcaatttgatcctataaatcttaattttctcaaacaagtcccttaactgatttcttttattcaatttggtccaattttgata 28776570  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttcttttt 573  Q
     ||||||||||||        ||| | |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  28776571 attttaatcccctaaaaacagagaccgttggattacggaggtctatcagattttataatgtatcatcaacacctaatttatttactttcttcttcttctt 28776670  T
Q  574 ccctcatattcatctacattcatccttc 601  Q
    || |||| ||||||| ||||||||||||    
T  28776671 ccatcatcttcatctccattcatccttc 28776698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 370 - 561
Target Start/End: Complemental strand, 31938406 - 31938216
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||   |||||||||    
T  31938406 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttagtccaatttt 31938307  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttacttt 561  Q
     ||| ||||||||||||        ||| | |||||| |||||||||||| |||||||||| ||||||||||||||||||||| ||||||||    
T  31938306 aataattttaatcccctaaaaaaagagaccgttggattacgaaggtctataagattttatagtgtatcaccaacacctaattt-tttacttt 31938216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 369 - 590
Target Start/End: Original strand, 2232620 - 2232840
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattt 468  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||  |||| |||||||||||||||||||  |||||||||    
T  2232620 atcccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaatacgtcccttaatttatttcttttattcaatttaatccaattt 2232719  T
Q  469 tgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
    | ||| ||||||||||||        ||| |||||||| ||| |||||||| ||||||||   ||||||| ||||||||||||||||||||||||| |||    
T  2232720 taataattttaatcccctagaaaaaaagaccattggattacggaggtctatgagattttacggtgtatcagcaacacctaatttatttactttctttttc 2232819  T
Q  569 tttttccctcatattcatctac 590  Q
    || ||||| ||| |||||||||    
T  2232820 ttcttccc-catcttcatctac 2232840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 370 - 586
Target Start/End: Complemental strand, 2233404 - 2233188
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||  |||||||||||||||||||||||| | |||||||||    
T  2233404 tcccttaacttatttcttttattcaattcggtctcataagtcttaactttgtcaaacatgtcccttaacttatttcttttattcaatttggtccaatttt 2233305  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||| ||        ||||| |||||| | | || ||||| ||||||||||  ||||||||||||||||||||| |||||||||||||||    
T  2233304 gataattttaatcctctaaaaaaagagatcgttggattatggagatctataagattttatagcgtatcaccaacacctaatttaattactttcttcttct 2233205  T
Q  570 ttttccctcatattcat 586  Q
    | |||| |||| |||||    
T  2233204 tcttccatcatcttcat 2233188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 369 - 550
Target Start/End: Complemental strand, 17742393 - 17742211
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattt 468  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||| ||||||||||    
T  17742393 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttgatccaattt 17742294  T
Q  469 tgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattt-tataatgtatcaccaacacctaat 550  Q
    ||||| ||||||||||||        ||| | |||||| ||| ||||||||||||||| || | ||||||| |||||||||||    
T  17742293 tgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagatttatacagtgtatcaacaacacctaat 17742211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 369 - 550
Target Start/End: Complemental strand, 19043713 - 19043531
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattt 468  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||| ||||||||||    
T  19043713 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttgatccaattt 19043614  T
Q  469 tgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattt-tataatgtatcaccaacacctaat 550  Q
    ||||| ||||||||||||        ||| | |||||| ||| ||||||||||||||| || | ||||||| |||||||||||    
T  19043613 tgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagatttatacagtgtatcaacaacacctaat 19043531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 369 - 570
Target Start/End: Original strand, 17116220 - 17116420
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattt 468  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||  |||||||||||||||||||||||| | | ||||||    
T  17116220 atcccttaacttatttcttttattcaatttggtctcataagtgttaagtttctcaaacacgtcccttaacttatttcttttattcaatttggttcaattt 17116319  T
Q  469 tgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
    ||||| ||||||| ||||        | | | |||||| ||| ||||| |||||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  17116320 tgataattttaat-ccctaaaaaatgacaccgttggattacggaggtccatcagagtttatagtgtatcaccaacacctaatttattcactttcttcttc 17116418  T
Q  569 tt 570  Q
    ||    
T  17116419 tt 17116420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 370 - 570
Target Start/End: Complemental strand, 21729287 - 21729087
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| |||||||||||||||||||| ||| |||||||  |||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||    
T  21729287 tcccttaatttatttcttttattcaatttagtcccataagttctaactttctcaaacacgtcccttaacttatttcttttattcaatttgattcaatttt 21729188  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||| ||        ||| |||||||| | ||||||||| || |||||||| ||||||| |||||||||||||||||||||||||| |||    
T  21729187 gataattttaatcctctaaaaaatgagaccattggattatgaaggtctaccatattttatagtgtatcatcaacacctaatttatttactttcttcatct 21729088  T
Q  570 t 570  Q
    |    
T  21729087 t 21729087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 374 - 586
Target Start/End: Original strand, 37609344 - 37609556
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||||||| |||    
T  37609344 ttaacttatttcttttatttaatttggtcatataagtcttaactttctcaaacacgtccctcaacttatttcttttattcaatttgatccaattttaata 37609443  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttcttttt 573  Q
     ||||||||||||        ||| | |||||| | | |||||||| |||||| ||| ||| ||| ||||||||||||||||||||||||||||||| ||    
T  37609444 attttaatcccctaaaaaaagagaccgttggattagggaggtctataagatttaatagtgtctcatcaacacctaatttatttactttcttcttcttctt 37609543  T
Q  574 ccctcatattcat 586  Q
    || |||| |||||    
T  37609544 ccatcatcttcat 37609556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 11348570 - 11348340
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| ||   |||||| |||||||||||| |||| |||||||||||    
T  11348570 tcccttaacttatttcttttattcaatttggtctcataagtattaactttatcatacatgttccttaactaatttcttttatttaatttgatccaatttt 11348471  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||| || |        ||| | ||| || ||| ||||||||||||||||||| | ||||||| |||||||||| |||||||||||||||||    
T  11348470 gataattttaattccttagaaaaagagaccgttgaattacggaggtctatcagattttatagtatatcacc-acacctaattaatttactttcttcttct 11348372  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | |||||| || ||| ||||||||||||||||    
T  11348371 tcttcccttatcttcctctacattcatccttc 11348340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 370 - 564
Target Start/End: Complemental strand, 10979274 - 10979080
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |||||||    
T  10979274 tcccttaacttatttcttttattcaatttggtcccataaatcttaaatttctcaaacacgtcatttcacttatttcttttattcaatttgattcaatttt 10979175  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttctt 564  Q
    |||| ||||| |||| |        ||| |||||||| ||| |||| ||||| ||||||   ||||||||||||| |||||||||||||||||||    
T  10979174 gataattttagtccctttaaaaaagagaccattggattacggaggtttatcaaattttacggtgtatcaccaacatctaatttatttactttctt 10979080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 370 - 567
Target Start/End: Complemental strand, 52525458 - 52525262
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||   |||||||||    
T  52525458 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacatcccttaacttatttcttttattcaatttagtccaatttt 52525359  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttctt 567  Q
     ||| ||||||||||||        ||| | |||||| | ||||||  || |||||||||||||| ||||||||| ||||||| ||||||||||||||    
T  52525358 aataattttaatcccctaaaaaaagagaccgttggattatgaaggttaataagattttataatgtgtcaccaacatctaattt-tttactttcttctt 52525262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 373 - 588
Target Start/End: Complemental strand, 47917708 - 47917494
Alignment:
Q  373 cttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgat 472  Q
    |||||||||||||||||||| ||||||||||||||| |||||  |||||||||||||||   ||||||||||||||||||||||| |||| |||||| ||    
T  47917708 cttaacttatttcttttatttaatttggtctcataaatcttagttttctcaaacacgtc-cctaacttatttcttttattcaatttgatctaattttaat 47917610  T
Q  473 acttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttt 572  Q
    | ||||||||||||        ||||  |||||| ||| |||| |||||||||||||| ||||| ||||||||| ||||||||||||||| ||||||| |    
T  47917609 aattttaatcccctaaaaataaagattgttggattacggaggtttatcagattttatagtgtattaccaacaccgaatttatttactttcctcttcttct 47917510  T
Q  573 tccctcatattcatct 588  Q
    ||| |||| |||||||    
T  47917509 tccatcatcttcatct 47917494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 370 - 575
Target Start/End: Original strand, 11346831 - 11347036
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| |||||||||||||| |||||||||  |||| |||||||||| ||||||||||   |||| ||||||||||||||||||| | |||||||||    
T  11346831 tcccttaatttatttcttttatttaatttggtcatataaatcttaactttatcaaacacgtgccttaatttatttcttttattcaatttgttccaatttt 11346930  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        ||| |||||||| | ||||||||| || ||| |||| |||||||||||||||||||||||||||||||||| |||    
T  11346931 gataattttaatcccctgaaaagagagaccattggattatgaaggtctaccatattgtatagtgtatcaccaacacctaatttatttactttcttcatct 11347030  T
Q  570 ttttcc 575  Q
    | ||||    
T  11347031 tcttcc 11347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 432 - 601
Target Start/End: Complemental strand, 37610800 - 37610631
Alignment:
Q  432 atttaacttatttcttttattcaattcgatccaattttgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataa 531  Q
    ||||||||||||| |||||||||||| | ||||||||||||| ||||||||||||        ||| | |||||| ||| |||||||||||||||||||     
T  37610800 atttaacttattttttttattcaatttggtccaattttgataattttaatcccctaaaaaaaaagaccgttggattacggaggtctatcagattttatag 37610701  T
Q  532 tgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||||||    
T  37610700 tgtatcaccaacacctaatttatttactttcttcttcttcttccctcatcttcgtcttcattcatccttc 37610631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 370 - 568
Target Start/End: Original strand, 47429646 - 47429839
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||| ||||||| | |||||||||    
T  47429646 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccttta-------tcttttgttcaatttggtccaatttt 47429738  T
Q  470 gatacttttaatcccct--nnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttctt 567  Q
    |||| ||||||||||||          |||   |||||| ||| |||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  47429739 gataattttaatcccctaaaaaaaaaaagactgttggattacggaggtctattagattttatagtgtatcaccaacatctaatttatttactttcttctt 47429838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 50881208 - 50880985
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||  |||| |||||||||||||||||||   | |||||||    
T  50881208 tcccttaacttatttcttttattcaatttgaccacataagtcttaactttctcaaacacgtcccttaatttatttcttttattcaatttagttcaatttt 50881109  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||||        | |  ||||||| | ||||||||| || |||||||| |||| ||||||||||||||||||||| ||||||| |||    
T  50881108 gataattttaatccccta-------aaaaaattggattatgaaggtctaccatattttatagtgtaccaccaacacctaatttatttattttcttcatct 50881016  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | ||||| ||| ||||||  |||||| |||||    
T  50881015 tcttccc-catcttcatcatcattcaaccttc 50880985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 370 - 552
Target Start/End: Complemental strand, 54354490 - 54354308
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||||||||  ||||||||||||||| |||||||| | |||||||||    
T  54354490 tcccttaacctatttcttttatttaatttggtcccttaagtcttaactttctcaaacacgtcccttaacttatttctttgattcaatttggtccaatttt 54354391  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaattt 552  Q
    |||| ||||||| ||||        ||| |||||||| |   ||||||||||||||||| | |||||||||||||||||||||    
T  54354390 gataattttaattccctataaaaagagaccattggattatagaggtctatcagattttacagtgtatcaccaacacctaattt 54354308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 370 - 555
Target Start/End: Complemental strand, 53180902 - 53180718
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||| ||||||||||||   |||||||||    
T  53180902 tcccttaacttattt-ttttattcaatttgatctcataagtcgtaactttctcaaacacgttctttaacttattttttttattcaatttagtccaatttt 53180804  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatt 555  Q
     ||| ||||||||| ||        ||| | |||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  53180803 aataattttaatcctctaaaaaaggagaccgttggattacggaggtctatcagattgtatagtgtatcaccaacacctaatttatt 53180718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 370 - 550
Target Start/End: Complemental strand, 5691193 - 5691014
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||  ||||||||||||||||||| || | | |||||||||    
T  5691193 tcccttaacttatttcttttattcaatttagtcacataagtcttaattttctcaaacacgtcccttaacttatttcttttattaaacttg-tccaatttt 5691095  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaat 550  Q
    |||| ||| ||||||||        ||| | |||||| ||| ||||||||||||||||| | |||||||||||||||||||    
T  5691094 gataatttaaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaat 5691014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 376 - 570
Target Start/End: Original strand, 17740862 - 17741049
Alignment:
Q  376 aacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgatact 475  Q
    ||||||||||||||||| |||||||||||       |||||||||||||||| |||  ||||||||||||||||||| |||| ||||||||||||||| |    
T  17740862 aacttatttcttttatttaatttggtctc-------ttaactttctcaaacatgtcccttaacttatttcttttattaaatttgatccaattttgataat 17740954  T
Q  476 tttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
    ||||||||  |        ||| | | |||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17740955 tttaatcctttaaaaatagagaccgtcggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttctt 17741049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 376 - 570
Target Start/End: Original strand, 19042182 - 19042369
Alignment:
Q  376 aacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgatact 475  Q
    ||||||||||||||||| |||||||||||       |||||||||||||||| |||  ||||||||||||||||||| |||| ||||||||||||||| |    
T  19042182 aacttatttcttttatttaatttggtctc-------ttaactttctcaaacatgtcccttaacttatttcttttattaaatttgatccaattttgataat 19042274  T
Q  476 tttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
    ||||||||  |        ||| | | |||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19042275 tttaatcctttaaaaatagagaccgtcggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttctt 19042369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 374 - 570
Target Start/End: Complemental strand, 23073469 - 23073273
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||| | |||  ||||||||||||||||||||||   | | |||||||||||    
T  23073469 ttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaagatgtcccttaacttatttcttttattcaaactggttcaattttgata 23073370  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
     ||||||||||||        ||| | ||| || ||| |||| ||||| ||||||   |||||||||||||||||||||||||||||||||||||||    
T  23073369 attttaatcccctaaaaaaagagaccgttgaattacggaggtgtatcaaattttacggtgtatcaccaacacctaatttatttactttcttcttctt 23073273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 724 - 826
Target Start/End: Complemental strand, 11348266 - 11348164
Alignment:
Q  724 agtgattgaattgaatcaaacaagcatttcacaaaaccagcaacaataactccttaacttcaacaaccatggcagcatcttctctaacatcctcattcta 823  Q
    ||||||||||||||||||| ||| |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11348266 agtgattgaattgaatcaagcaaacatttcacaaaagcagtagcaataactccttaacttcaacaaccatggcagcatcttctctaacatcctcattcta 11348167  T
Q  824 ctc 826  Q
    |||    
T  11348166 ctc 11348164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 374 - 486
Target Start/End: Original strand, 53764452 - 53764563
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   || ||||||||||    
T  53764452 ttaacttattt-ttttattcaatttggtctcataagtcttaactttctcaaacacgtcctttaacttatttcttttattcaatttagtcaaattttgata 53764550  T
Q  474 cttttaatcccct 486  Q
     ||||||||||||    
T  53764551 attttaatcccct 53764563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 370 - 486
Target Start/End: Complemental strand, 53766065 - 53765949
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||  | |||||||||| |||||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  53766065 tcccttaacttatttcttttattcaatttggttccgtaagtcttaattttctcaaacacgtcccttaacttatttcttttattcaatttgatccaatttt 53765966  T
Q  470 gatacttttaatcccct 486  Q
     ||| ||||||||||||    
T  53765965 aataattttaatcccct 53765949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 374 - 549
Target Start/End: Original strand, 54353046 - 54353221
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    |||||||||||||||||||||||||| || |||||||||||||||| ||||||| |||  ||||||||||||||||| |||||| | ||||||||| |||    
T  54353046 ttaacttatttcttttattcaatttgatcccataagtcttaactttatcaaacatgtcccttaacttatttcttttactcaatttggtccaatttttata 54353145  T
Q  474 cttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaa 549  Q
     |||||||||||         ||| | |||||| ||||||||||||||||||||||  |||||||| |||||||||    
T  54353146 attttaatccccgaaaaaaagagaccgttggattacgaaggtctatcagattttatcgtgtatcactaacacctaa 54353221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 374 - 482
Target Start/End: Original strand, 23091214 - 23091322
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgata 473  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||| ||||||||||||||| | ||||| |||||||    
T  23091214 ttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtctcttaacttaattcttttattcaatttggtccaactttgata 23091313  T
Q  474 cttttaatc 482  Q
     ||||||||    
T  23091314 attttaatc 23091322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 369 - 484
Target Start/End: Original strand, 53178719 - 53178834
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattt 468  Q
    |||||||||||||||| |||||||||||||| | ||||||| ||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||    
T  53178719 atcccttaacttattttttttattcaatttgatttcataagccttaactttctcaaacacgttccttaacttatttcttttattcaatttgatccaattt 53178818  T
Q  469 tgatacttttaatccc 484  Q
    ||||  ||||||||||    
T  53178819 tgatcattttaatccc 53178834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 370 - 568
Target Start/End: Original strand, 5689744 - 5689936
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||| ||||||||||||||| ||||||||| ||||||       |||| ||||||||||  ||||||||||||||||||| |||| | |||||||||    
T  5689744 tcccttagcttatttcttttattaaatttggtcccataaga------tttcccaaacacgtcccttaacttatttcttttattaaatttggtccaatttt 5689837  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttc 568  Q
    |||| |||||||||  |        ||| | |||||| ||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  5689838 gataattttaatcctttaaaacaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacttaatttatttactttcttcttc 5689936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 434 - 601
Target Start/End: Original strand, 35758087 - 35758253
Alignment:
Q  434 ttaacttatttcttttattcaattcgatccaattttgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatg 533  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||           | | | |||||| ||||| ||||||||||||||| | ||    
T  35758087 ttaacttatttcttttattcaatttggtccaattttgataattttaatccaaaaaaaaaacaaaccgttggattacgaatgtctatcagattttacagtg 35758186  T
Q  534 tatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||    
T  35758187 tatcaccaacacctaatttatttactttcttcttcttcttccctc-tcttcatctacattcatccttc 35758253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 370 - 457
Target Start/End: Original strand, 43392645 - 43392732
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaatt 457  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||    
T  43392645 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaagcacgtccctgaacttatttcttttattcaatt 43392732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 15290588 - 15290358
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||| |||||| || |||||||||||| ||||||||||| |||  |||| ||||||| ||||||||||| |||||||||||    
T  15290588 tcccttaacttatttcttttatttaatttgatcacataagtcttaattttctcaaacatgtctattaaattatttcatttattcaatttgatccaatttt 15290489  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
     ||| ||||||| |  |        ||| ||||| || | ||||||||| || |||||||| ||||||| ||| |||||||||||||| ||||||| |||    
T  15290488 aataattttaat-catttaaaaaaaagaccattgaattatgaaggtctaccatattttatagtgtatcatcaatacctaatttatttattttcttcatct 15290390  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | ||||  ||| ||||||  |||||| |||||    
T  15290389 tcttcctccatcttcatcatcattcaaccttc 15290358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 287 - 402
Target Start/End: Original strand, 23091187 - 23091302
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    |||||||||||||||||||||||| | ||||||||        ||||||||||||| ||||||| ||||||||||||||||| || ||||||||| ||||    
T  23091187 tttaggcttaattgatctgccggtcttttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtctcttaacttaattct 23091286  T
Q  387 tttattcaatttggtc 402  Q
    ||||||||||||||||    
T  23091287 tttattcaatttggtc 23091302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 287 - 402
Target Start/End: Complemental strand, 28777809 - 28777694
Alignment:
Q  287 tttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttct 386  Q
    ||||||||||||||||||||||||  ||||| |||        |||||||||||||| |||||| ||||||||||||||||| |||||||||| ||||||    
T  28777809 tttaggcttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttct 28777710  T
Q  387 tttattcaatttggtc 402  Q
    ||||||||||||||||    
T  28777709 tttattcaatttggtc 28777694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 291 - 398
Target Start/End: Complemental strand, 31938425 - 31938318
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  31938425 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttctttta 31938326  T
Q  391 ttcaattt 398  Q
    ||||||||    
T  31938325 ttcaattt 31938318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 292 - 402
Target Start/End: Complemental strand, 35759348 - 35759238
Alignment:
Q  292 gcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttat 391  Q
    |||||||||||||||||||  |||||||||        ||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  35759348 gcttaattgatctgccggtcccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaatttatttcttttat 35759249  T
Q  392 tcaatttggtc 402  Q
    |||||||||||    
T  35759248 tcaatttggtc 35759238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 446 - 601
Target Start/End: Original strand, 50879782 - 50879937
Alignment:
Q  446 ttttattcaattcgatccaattttgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacac 545  Q
    ||||||||||||   ||||||||||||| |||||||||| |        | ||| || ||| ||| ||||||||||||||||||| ||||||||||||||    
T  50879782 ttttattcaattttgtccaattttgataattttaatcccatagaaaaaaaaatcgttagattacggaggtctatcagattttatagtgtatcaccaacac 50879881  T
Q  546 ctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    ||||||| ||| ||||||||||||| || |||||| |||||||| |||||||||||    
T  50879882 ctaatttgtttcctttcttcttcttctttcctcatcttcatctatattcatccttc 50879937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 289 - 401
Target Start/End: Original strand, 17116200 - 17116312
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    |||||||||||||||||||| |  |||||||||        ||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||||||    
T  17116200 taggcttaattgatctgccgatcccttaacttatttcttttattcaatttggtctcataagtgttaagtttctcaaacacgtcccttaacttatttcttt 17116299  T
Q  389 tattcaatttggt 401  Q
    |||||||||||||    
T  17116300 tattcaatttggt 17116312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 31937034 - 31937146
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||  |||||||||        ||||||||||||||||||||| ||||||||||||||||| |||||| |||||||| ||||    
T  31937034 aggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttcacttatttatttt 31937133  T
Q  390 attcaatttggtc 402  Q
    ||||| |||||||    
T  31937134 attcattttggtc 31937146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 330 - 398
Target Start/End: Complemental strand, 52525438 - 52525370
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaattt 398  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  52525438 attcaatttggtctcataagtcttaactttctcaaacacatcccttaacttatttcttttattcaattt 52525370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 330 - 401
Target Start/End: Original strand, 46902370 - 46902441
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggt 401  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46902370 attcaatttggtcccataaatcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggt 46902441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 370 - 483
Target Start/End: Complemental strand, 17117498 - 17117387
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||  | ||| |||||||||||| |  | ||||||    
T  17117498 tcccttaacttatttcttttattcaatttggtctcataagtcttaagtttctcaaacacgtcccttaa--ttttttttttattcaatttgggcaaatttt 17117401  T
Q  470 gatacttttaatcc 483  Q
    |||  |||||||||    
T  17117400 gatgattttaatcc 17117387  T

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Target: chr3; HSP #56
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 21727908 - 21728018
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||||||  | |||||||        ||||||||||||| ||||||| ||||||||||||||||  |||||||||||||||||||    
T  21727908 taggcttaattgatctgccggtcccataacttatttcttttattcaatttggtctcataagtcttaactttctcaaacatgtcccttaacttatttcttt 21728007  T
Q  389 tattcaatttg 399  Q
    |||||||||||    
T  21728008 tattcaatttg 21728018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 288 - 402
Target Start/End: Complemental strand, 54354512 - 54354398
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    |||||||||||||||||||||||  |||||| ||        ||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||    
T  54354512 ttaggcttaattgatctgccggtcccttaacctatttcttttatttaatttggtcccttaagtcttaactttctcaaacacgtcccttaacttatttctt 54354413  T
Q  388 ttattcaatttggtc 402  Q
    | |||||||||||||    
T  54354412 tgattcaatttggtc 54354398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 21729267 - 21729198
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    ||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  21729267 attcaatttagtcccataagttctaactttctcaaacacgtcccttaacttatttcttttattcaatttg 21729198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 512 - 601
Target Start/End: Original strand, 43392767 - 43392856
Alignment:
Q  512 aggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||| |||||||||||| ||||||||| ||||||| |||||| |||||    
T  43392767 aggtctatcagattttatagtgtaccaccaacaccaaatttatttattttcttcttcttcttccctcatcttcatcttcattcaaccttc 43392856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 483
Target Start/End: Complemental strand, 46986188 - 46986077
Alignment:
Q  371 cccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttg 470  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||||| |||||||||||||  ||||||||||| | ||||| |||| | || |||||||    
T  46986188 cccttaatttatttcttttattcaatttggtccaataagtcttaactctctcaaacacgtcccttaacttattt-tcttattaaatttggtcaaattttg 46986090  T
Q  471 atacttttaatcc 483  Q
    ||| |||||||||    
T  46986089 ataattttaatcc 46986077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 55209821 - 55209893
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  55209821 attcaatttggttccataagttttaactttctcaaacacgtcccttaatttatttcttttatttaatttggtc 55209893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 370 - 457
Target Start/End: Original strand, 23072079 - 23072165
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaatt 457  Q
    |||||||| | ||||| |||||||||||||||| |||||||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  23072079 tcccttaattcatttcatttattcaatttggtcccataagtcttaactttctcaaagacgtc-cttaacttatttcttttattcaatt 23072165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 369 - 451
Target Start/End: Original strand, 50879512 - 50879594
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttat 451  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||  |||| |||||| ||||||    
T  50879512 atcccttaacttatttcttttattcaatttggtcccataaatcttaactttcttaaacacgtcccttaaattattttttttat 50879594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 17742372 - 17742303
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  17742372 attcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttg 17742303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 19043692 - 19043623
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  19043692 attcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttg 19043623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 290 - 398
Target Start/End: Original strand, 2232601 - 2232709
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    ||||||||||||||||||| |  |||||||||        ||||||||||||| ||||||| |||||||||||||| || |||||||| |||||||||||    
T  2232601 aggcttaattgatctgccgatcccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaatacgtcccttaatttatttctttt 2232700  T
Q  390 attcaattt 398  Q
    |||||||||    
T  2232701 attcaattt 2232709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 23072099 - 23072170
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||||||||||| |||||||||||||| || | |||||||||||||||||||||||||||||||    
T  23072099 attcaatttggtcccataagtcttaactttctcaaagacgt-ccttaacttatttcttttattcaatttggtc 23072170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 43392665 - 43392737
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||| ||||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||||    
T  43392665 attcaatttggtctcataagtcttaactttctcaagcacgtccctgaacttatttcttttattcaatttggtc 43392737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 47431266 - 47431194
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||| |||||||||||||||| |||||||| | |||||||||||||||||| ||||||||||||    
T  47431266 attcaatttggtctcataagttttaactttttcaaacacgttccttaacttatttcttttgttcaatttggtc 47431194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 330 - 398
Target Start/End: Original strand, 53764467 - 53764535
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaattt 398  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  53764467 attcaatttggtctcataagtcttaactttctcaaacacgtcctttaacttatttcttttattcaattt 53764535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 2233423 - 2233312
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||| ||||  |||||||||        |||||||| |||| ||||||| |||||||| |||||||  |||||||||||||||||||||    
T  2233423 ggcttaattgatctgtcggtcccttaacttatttcttttattcaattcggtctcataagtcttaactttgtcaaacatgtcccttaacttatttctttta 2233324  T
Q  391 ttcaatttggtc 402  Q
    ||||||||||||    
T  2233323 ttcaatttggtc 2233312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 53766083 - 53765976
Alignment:
Q  292 gcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttat 391  Q
    ||||||||||||||| |||  |||||||||        |||||||||||| || ||||| |||| |||||||||||| ||||||||||||||||||||||    
T  53766083 gcttaattgatctgcgggtcccttaacttatttcttttattcaatttggttccgtaagtcttaattttctcaaacacgtcccttaacttatttcttttat 53765984  T
Q  392 tcaatttg 399  Q
    ||||||||    
T  53765983 tcaatttg 53765976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 515 - 570
Target Start/End: Complemental strand, 55210862 - 55210807
Alignment:
Q  515 tctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  55210862 tctatcagattttataatgtatcaccaacacataatttatttactttcttcttctt 55210807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 293 - 402
Target Start/End: Complemental strand, 43394170 - 43394060
Alignment:
Q  293 cttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaactta-tttcttttat 391  Q
    ||||||||||||||||||  |||||||||        ||||||||||||| ||||||| |||||||||||||| || |||||||||||| ||||||||||    
T  43394170 cttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaagacgtcccttaacttattttcttttat 43394071  T
Q  392 tcaatttggtc 402  Q
    |||| ||||||    
T  43394070 tcaaattggtc 43394060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 290 - 395
Target Start/End: Complemental strand, 23073493 - 23073388
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||   ||||||||        ||||||||||||||||||| | |||||||||||||| |  ||||||||||||||||||||    
T  23073493 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaagatgtcccttaacttatttctttt 23073394  T
Q  390 attcaa 395  Q
    ||||||    
T  23073393 attcaa 23073388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 54353021 - 54353134
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||| ||||   ||||||||        |||||||||| |||||||||| |||||||| |||||||  |||||||||||||||||||    
T  54353021 taggcttaattgatctgacggtcctttaacttatttcttttattcaatttgatcccataagtcttaactttatcaaacatgtcccttaacttatttcttt 54353120  T
Q  389 tattcaatttggtc 402  Q
    || |||||||||||    
T  54353121 tactcaatttggtc 54353134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 10979293 - 10979185
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        ||||||||||||||||||| | |||| |||||||||||| ||  || ||||||||||||||    
T  10979293 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataaatcttaaatttctcaaacacgtcatttcacttatttctttta 10979194  T
Q  391 ttcaatttg 399  Q
    |||||||||    
T  10979193 ttcaatttg 10979185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 595
Target Start/End: Original strand, 23072203 - 23072283
Alignment:
Q  515 tctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattca 595  Q
    |||||||||||||||| |||| | ||||||||  |||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  23072203 tctatcagattttatagtgtaccgccaacaccagatttatttactttcttcttcttcttccctcatcttcatcttcattca 23072283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 37609322 - 37609429
Alignment:
Q  292 gcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttat 391  Q
    |||||||||||||||||||   ||||||||        ||| |||||||||  |||||| ||||||||||||||||| ||||| ||||||||||||||||    
T  37609322 gcttaattgatctgccggtcctttaacttatttcttttatttaatttggtcatataagtcttaactttctcaaacacgtccctcaacttatttcttttat 37609421  T
Q  392 tcaatttg 399  Q
    ||||||||    
T  37609422 tcaatttg 37609429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 330 - 401
Target Start/End: Complemental strand, 46903703 - 46903632
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggt 401  Q
    ||||||||||||||||||| | |||| ||| |||||||| ||| ||||||||||||||||||||||||||||    
T  46903703 attcaatttggtcccataaatcttaagtttttcaaacacgtcctttaacttatttcttttattcaatttggt 46903632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 5691209 - 5691111
Alignment:
Q  294 ttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttatt 392  Q
    |||||||||||||||||  |||||||||        ||||||||| ||| ||||||| |||| |||||||||||| |||||||||||||||||||||||    
T  5691209 ttaattgatctgccggtcccttaacttatttcttttattcaatttagtcacataagtcttaattttctcaaacacgtcccttaacttatttcttttatt 5691111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 330 - 398
Target Start/End: Complemental strand, 50881188 - 50881120
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaattt 398  Q
    ||||||||||  | ||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  50881188 attcaatttgaccacataagtcttaactttctcaaacacgtcccttaatttatttcttttattcaattt 50881120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 53178701 - 53178809
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    |||||||||||||||||| |  |||||||||        |||||||||| |  ||||||  ||||||||||||||||| | |||||||||||||||||||    
T  53178701 ggcttaattgatctgccgatcccttaacttattttttttattcaatttgatttcataagccttaactttctcaaacacgttccttaacttatttctttta 53178800  T
Q  391 ttcaatttg 399  Q
    |||||||||    
T  53178801 ttcaatttg 53178809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 34014527 - 34014585
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacac 428  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||| || |||||||    
T  34014527 tcccttaacttatttcttttattcaatttggtcccataaatcttaactgtcgcaaacac 34014585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 11348590 - 11348481
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| |||||||| ||| |||  | |||||||| |||||||||    
T  11348590 aggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtattaactttatcatacatgttccttaactaatttctttt 11348491  T
Q  390 attcaatttg 399  Q
    ||| ||||||    
T  11348490 atttaatttg 11348481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 369 - 481
Target Start/End: Complemental strand, 33113410 - 33113306
Alignment:
Q  369 atcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttc-ttttattcaattcgatccaatt 467  Q
    ||||||||| ||||||||||||||||||||||| |         ||||||| |||||||||||  |||||||||||| |||||||||||| | |||||||    
T  33113410 atcccttaatttatttcttttattcaatttggttt---------taactttttcaaacacgtcccttaacttatttctttttattcaatttggtccaatt 33113320  T
Q  468 ttgatacttttaat 481  Q
    |||||| |||||||    
T  33113319 ttgataattttaat 33113306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 379
Target Start/End: Original strand, 34014507 - 34014596
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||||||||  |||||||||        ||||||||||||||||||| | |||||| || ||||||||||||||||||    
T  34014507 aggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataaatcttaactgtcgcaaacacatcccttaact 34014596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 52521925 - 52522038
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    |||| ||||||||||||| |||  |||||||||        ||||||||||||| ||||  | ||||||||||||||||| ||| || |||||||| |||    
T  52521925 taggtttaattgatctgctggtcccttaacttatttctttaattcaatttggtctcatagatcttaactttctcaaacacgtcctttcacttatttattt 52522024  T
Q  389 tattcaatttggtc 402  Q
    ||||||||||||||    
T  52522025 tattcaatttggtc 52522038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 740 - 808
Target Start/End: Original strand, 21728274 - 21728342
Alignment:
Q  740 caaacaagcatttcacaaaaccagcaacaataactccttaacttcaacaaccatggcagcatcttctct 808  Q
    |||||||||||||||||||  ||| | ||| |||| |||||||||||||||||||||||||||| ||||    
T  21728274 caaacaagcatttcacaaacacagtagcaagaacttcttaacttcaacaaccatggcagcatctactct 21728342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 532 - 600
Target Start/End: Original strand, 23091926 - 23091994
Alignment:
Q  532 tgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatcctt 600  Q
    |||||||||||||||||||||||| || |||| |||||| ||| ||||| |||||| ||||||||||||    
T  23091926 tgtatcaccaacacctaatttattaaccttctccttcttcttctctcatcttcatccacattcatcctt 23091994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 28776487 - 28776559
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||| ||| |||| | |||| |||||||||||  |||||||||| ||||||||||||||||||||||    
T  28776487 attcaatttgatcctataaatcttaattttctcaaacaagtcccttaactgatttcttttattcaatttggtc 28776559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 46986169 - 46986098
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||| |||||| |||||| |||||||||| ||||||||||||||| | ||||| |||||||||    
T  46986169 attcaatttggtccaataagtcttaactctctcaaacacgtcccttaacttattt-tcttattaaatttggtc 46986098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 439 - 567
Target Start/End: Original strand, 10978093 - 10978220
Alignment:
Q  439 ttatttcttttattcaattcgatccaattttgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatca 538  Q
    ||||||||||||||||| |   ||||||||| ||| ||||||||||||        | | | |||||| |||||||||||| | |||||||| |||||||    
T  10978093 ttatttcttttattcaacttagtccaattttaataattttaatcccctaaaaaaagaaaccgttggattacgaaggtctataaaattttatagtgtatca 10978192  T
Q  539 ccaacacctaatttatttactttcttctt 567  Q
    ||| |||||||||| ||||||||||||||    
T  10978193 ccatcacctaattt-tttactttcttctt 10978220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 290 - 400
Target Start/End: Complemental strand, 17117518 - 17117410
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||| ||||  |||||||||        ||||||||||||| ||||||| |||| |||||||||||| ||||||||  | ||| ||||    
T  17117518 aggcttaattgatctgtcggtcccttaacttatttcttttattcaatttggtctcataagtcttaagtttctcaaacacgtcccttaa--tttttttttt 17117421  T
Q  390 attcaatttgg 400  Q
    |||||||||||    
T  17117420 attcaatttgg 17117410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 374 - 416
Target Start/End: Complemental strand, 24376523 - 24376481
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaac 416  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  24376523 ttaacttatttcttttattcaatttggtctcataagttttaac 24376481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 372 - 426
Target Start/End: Original strand, 27749127 - 27749181
Alignment:
Q  372 ccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaac 426  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||||||| ||||    
T  27749127 ccttaacttatgtcttttattcaatttagtcacataagtcttaactttcttaaac 27749181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 27750526 - 27750472
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacac 428  Q
    |||| |||||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  27750526 ttaatttatttcttttattcaatttggtctcataagttttaattttttcaaacac 27750472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 512 - 570
Target Start/End: Complemental strand, 33111802 - 33111744
Alignment:
Q  512 aggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctt 570  Q
    |||||||| | |||||||| |||||| || |||||||||||||||||||||||||||||    
T  33111802 aggtctataaaattttatagtgtatctcccacacctaatttatttactttcttcttctt 33111744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 349 - 402
Target Start/End: Complemental strand, 33113379 - 33113325
Alignment:
Q  349 gttttaactttctcaaacacatcccttaacttatttc-ttttattcaatttggtc 402  Q
    ||||||||||| |||||||| |||||||||||||||| |||||||||||||||||    
T  33113379 gttttaactttttcaaacacgtcccttaacttatttctttttattcaatttggtc 33113325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 290 - 379
Target Start/End: Complemental strand, 24376547 - 24376458
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||||||||||   ||||||||        ||||||||||||| |||||||||||||  || ||||||||||||||||||    
T  24376547 aggcttaattgatctgccggtcctttaacttatttcttttattcaatttggtctcataagttttaacagtcacaaacacatcccttaact 24376458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 27750510 - 27750461
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  27750510 attcaatttggtctcataagttttaattttttcaaacacatcccttaact 27750461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 370 - 439
Target Start/End: Complemental strand, 34015867 - 34015798
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaact 439  Q
    |||||||| |||||||||||||||||||||||| |||||||| ||| | || ||||||| || |||||||    
T  34015867 tcccttaagttatttcttttattcaatttggtcccataagtcataaatgtcgcaaacacatcctttaact 34015798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 50879533 - 50879594
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttat 391  Q
    ||||||||||||||||||| | |||||||||| |||||| |||||||| |||||| ||||||    
T  50879533 attcaatttggtcccataaatcttaactttcttaaacacgtcccttaaattattttttttat 50879594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 398
Target Start/End: Complemental strand, 53180883 - 53180815
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaattt 398  Q
    |||||||||| || |||||||  |||||||||||||||| | | ||||||||||| |||||||||||||    
T  53180883 attcaatttgatctcataagtcgtaactttctcaaacacgttctttaacttattttttttattcaattt 53180815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 17740891 - 17740938
Alignment:
Q  352 ttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  17740891 ttaactttctcaaacatgtcccttaacttatttcttttattaaatttg 17740938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 19042211 - 19042258
Alignment:
Q  352 ttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  19042211 ttaactttctcaaacatgtcccttaacttatttcttttattaaatttg 19042258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 495 - 601
Target Start/End: Complemental strand, 24376421 - 24376317
Alignment:
Q  495 agatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattc 594  Q
    ||||| ||||||||   ||||||| ||||| |||||||||||||||||||||| | ||||||| ||||||| | || ||||| ||| ||||||  |||||    
T  24376421 agatcgttggataagagaggtctaccagatcttataatgtatcaccaacacctga-ttatttaatttcttcatgttcttccc-catcttcatcatcattc 24376324  T
Q  595 atccttc 601  Q
    |||||||    
T  24376323 atccttc 24376317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 564
Target Start/End: Original strand, 53101685 - 53101735
Alignment:
Q  514 gtctatcagattttataatgtatcaccaacacctaatttatttactttctt 564  Q
    ||||| ||||| ||||| |||||||||||||| ||||||||||||||||||    
T  53101685 gtctaccagatcttatagtgtatcaccaacacttaatttatttactttctt 53101735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Original strand, 5689785 - 5689830
Alignment:
Q  357 tttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    |||| ||||||| ||||||||||||||||||||||| |||||||||    
T  5689785 tttcccaaacacgtcccttaacttatttcttttattaaatttggtc 5689830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 11346855 - 11346920
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    |||||||||  |||| | |||||||| |||||||| | |||||| |||||||||||||||||||||    
T  11346855 aatttggtcatataaatcttaactttatcaaacacgtgccttaatttatttcttttattcaatttg 11346920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 47917687 - 47917623
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttg 399  Q
    ||||||||| ||||| | |||  |||||||||||| |||| |||||||||||||||||||||||||    
T  47917687 aatttggtctcataaatcttagttttctcaaacacgtccc-taacttatttcttttattcaatttg 47917623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 601
Target Start/End: Original strand, 53764911 - 53764999
Alignment:
Q  512 aggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    ||||||||||||||||||  |||||||||||||| |||||| |||||||| ||| |||| ||||  ||| ||||||| | |||| |||||    
T  53764911 aggtctatcagattttatggtgtatcaccaacacttaattt-tttactttattcatcttcttcctccatcttcatcttctttcaaccttc 53764999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 370 - 402
Target Start/End: Original strand, 35758083 - 35758115
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||||||    
T  35758083 tcccttaacttatttcttttattcaatttggtc 35758115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 501 - 555
Target Start/End: Original strand, 27749237 - 27749291
Alignment:
Q  501 ttggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatt 555  Q
    |||||||| |||| |||||||||| ||||| |||||||||||||| | |||||||    
T  27749237 ttggataaagaagatctatcagatcttatagtgtatcaccaacacttgatttatt 27749291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 330 - 368
Target Start/End: Original strand, 47429666 - 47429704
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacac 368  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  47429666 attcaatttggtctcataagtcttaactttctcaaacac 47429704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 370 - 415
Target Start/End: Complemental strand, 53101872 - 53101827
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaa 415  Q
    |||||||| ||||||||||||||||||||||||  |||| ||||||    
T  53101872 tcccttaagttatttcttttattcaatttggtcctataattcttaa 53101827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 7e-70; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 27892435 - 27892204
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||| |||||||||||    
T  27892435 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcagacacgtcccttaacttatttcttttattcaatttgatccaatttt 27892336  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||            ||| | || ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||    
T  27892335 gataattttaatcaaaaaaaaaaacagaccgttagattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttttttttct 27892236  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | ||||||||| ||||||||||||||||||||    
T  27892235 tcttccctcatcttcatctacattcatccttc 27892204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 27891125 - 27891356
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||| || | | |||||||    
T  27891125 tcccttaacttatttcttttattcaatttggtctcataggtcttaactttctcaaacacgtcccttaacttatttcttttattcattttggttcaatttt 27891224  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| |||||||             ||| | || ||| ||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||    
T  27891225 gataattttaataaaaaaaaaaaacagaccgttagattacgaatgtctatcagattttccagtgtatcaccaacacctaatttatttactttcttcttct 27891324  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | ||||||| | ||||||||||||||||||||    
T  27891325 tcttccctcgtcttcatctacattcatccttc 27891356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 370 - 570
Target Start/End: Original strand, 16602744 - 16602944
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||| || | | |||||||||    
T  16602744 tcccttaatttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaacttatttcttttatttaaattggtccaatttt 16602843  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||||||          ||| | |||||| ||| | ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  16602844 gataattttaatccctaaaaaaaaaagaccgttggattacggatgtctatcagattttacagtgtatcaccaacacctaatttatttactttcttcttct 16602943  T
Q  570 t 570  Q
    |    
T  16602944 t 16602944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 373 - 601
Target Start/End: Original strand, 26388240 - 26388454
Alignment:
Q  373 cttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgat 472  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||| ||||||||||    
T  26388240 cttaacttattttttttattcaatttgatctcataagtcttaactttctcaaacacgtcctttaacttatttcttttatttaatttgattcaattttgat 26388339  T
Q  473 acttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttt 572  Q
    | |||||||||| |        ||| | || ||| ||| |||||||||||||||||           | ||||||| |||||||||||||||||||   |    
T  26388340 aattttaatcccatataaaaaaagaccgtttgattacggaggtctatcagatttta-----------cgacacctagtttatttactttcttcttc---t 26388425  T
Q  573 tccctcatattcatctacattcatccttc 601  Q
    |||||||| ||||||||||||||||||||    
T  26388426 tccctcatcttcatctacattcatccttc 26388454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 370 - 570
Target Start/End: Complemental strand, 38244054 - 38243854
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||| |||||||||||||||| ||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||| | |||||||||    
T  38244054 tcccttaatttatttcttttattcattttggtcccataagtcttaactttttcaaacacgtcccttaacttatttcttttattcaatttggtccaatttt 38243955  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| |||||||| |||        | |   |||||| || ||||| ||| |||||||| | ||||| ||||||||| ||||||||||||||||||||||    
T  38243954 gataattttaatctcctaaaaaaagatactgttggattacaaaggtgtataagattttacagtgtattaccaacaccaaatttatttactttcttcttct 38243855  T
Q  570 t 570  Q
    |    
T  38243854 t 38243854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 370 - 462
Target Start/End: Original strand, 43814540 - 43814632
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatc 462  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  43814540 tcccttaacttatttcttttattcaatttcgtctcataagtcttaactttctcaaatacgtcctttaacttatttcttttattcaatttgatc 43814632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 370 - 549
Target Start/End: Original strand, 23832987 - 23833165
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||  ||||||| ||| ||||||||||||   |||||||||    
T  23832987 tcccttaacttatttattttattccatttggtcccataagtcttaactttctcaaacacgtc-cttaacttttttattttattcaatttagtccaatttt 23833085  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaa 549  Q
    |||| ||||||||||||        ||| | |||||| ||| |||||||  |||||||||| ||||||| ||||||||||    
T  23833086 gataattttaatcccctaaaaaagaagaccgttggattacggaggtctagaagattttatagtgtatcatcaacacctaa 23833165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 370 - 457
Target Start/End: Complemental strand, 16604288 - 16604201
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaatt 457  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||  | ||||||||||||||||||||||    
T  16604288 tcccttaacttatttcttttattcaatttggtcccataagtcttaagtttctcaagcacgtccctgaacttatttcttttattcaatt 16604201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 288 - 399
Target Start/End: Complemental strand, 27892457 - 27892346
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctt 387  Q
    |||||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||    
T  27892457 ttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcagacacgtcccttaacttatttctt 27892358  T
Q  388 ttattcaatttg 399  Q
    ||||||||||||    
T  27892357 ttattcaatttg 27892346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 289 - 401
Target Start/End: Original strand, 27891104 - 27891216
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||||||  |||||||||        ||||||||||||| |||| || ||||||||||||||||| |||||||||||||||||||    
T  27891104 taggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataggtcttaactttctcaaacacgtcccttaacttatttcttt 27891203  T
Q  389 tattcaatttggt 401  Q
    |||||| ||||||    
T  27891204 tattcattttggt 27891216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 412 - 567
Target Start/End: Original strand, 38242944 - 38243096
Alignment:
Q  412 ttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaattttgatacttttaatcccctnnnnnnntagatcattggataacga 511  Q
    |||||||| ||||||| |||  ||||||||||||||||||| |||| ||||||||||||||| |||||||| |||        ||| | |||||| || |    
T  38242944 ttaactttttcaaacatgtctcttaacttatttcttttatttaatttgatccaattttgataattttaatctcctaaaaaaagagaccgttggattacaa 38243043  T
Q  512 aggtctatcagattttataatgtatcaccaacacctaatttatttactttcttctt 567  Q
    ||   ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  38243044 ag---tataagattttataatgtatcaccaacaccaaatttatttactttcttctt 38243096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 16602764 - 16602836
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||||    
T  16602764 attcaatttggtcccataagtcttaactttctcaaacacgtcccttaacttatttcttttatttaaattggtc 16602836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 16604308 - 16604196
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    ||||||||||||||| |||||  |||||||||        ||||||||||||||||||||| |||| |||||||| ||| ||||| ||||||||||||||    
T  16604308 aggcttaattgatctaccggtcccttaacttatttcttttattcaatttggtcccataagtcttaagtttctcaagcacgtccctgaacttatttctttt 16604209  T
Q  390 attcaatttggtc 402  Q
    |||||||||||||    
T  16604208 attcaatttggtc 16604196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 38244034 - 38243962
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtc 402  Q
    ||||| ||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  38244034 attcattttggtcccataagtcttaactttttcaaacacgtcccttaacttatttcttttattcaatttggtc 38243962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 370 - 441
Target Start/End: Complemental strand, 23833969 - 23833898
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaactta 441  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||  ||||||||    
T  23833969 tcccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcccttaactta 23833898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 330 - 414
Target Start/End: Original strand, 43814560 - 43814644
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaatttggtctcataagtctta 414  Q
    ||||||||| ||| ||||||| |||||||||||||| || ||| |||||||||||||||||||||||||| || |||||||||||    
T  43814560 attcaatttcgtctcataagtcttaactttctcaaatacgtcctttaacttatttcttttattcaatttgatcacataagtctta 43814644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 293 - 399
Target Start/End: Original strand, 26388220 - 26388326
Alignment:
Q  293 cttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttatt 392  Q
    ||||||||||||| |||| ||||||||||        |||||||||| || ||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  26388220 cttaattgatctgtcggtctcttaacttattttttttattcaatttgatctcataagtcttaactttctcaaacacgtcctttaacttatttcttttatt 26388319  T
Q  393 caatttg 399  Q
     ||||||    
T  26388320 taatttg 26388326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 512 - 601
Target Start/End: Complemental strand, 16604166 - 16604077
Alignment:
Q  512 aggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    ||||||| ||||||||||| |||| |||||||||   |||||||||||||||||||||| ||||||||| ||||||| |||||| |||||    
T  16604166 aggtctaccagattttatagtgtaccaccaacactggatttatttactttcttcttcttcttccctcatcttcatcttcattcaaccttc 16604077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 288 - 381
Target Start/End: Complemental strand, 23833991 - 23833898
Alignment:
Q  288 ttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaactta 381  Q
    |||||||||||||||||||||||  |||||||||        |||||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  23833991 ttaggcttaattgatctgccggtcccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcccttaactta 23833898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 515 - 601
Target Start/End: Original strand, 5033623 - 5033708
Alignment:
Q  515 tctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    |||| ||||||||||| |||||||||||||  ||||||||||||||||||| |||| ||||| ||| ||||||| ||||||||||||    
T  5033623 tctaccagattttatagtgtatcaccaacatttaatttatttactttcttcatcttcttccc-catcttcatcttcattcatccttc 5033708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 330 - 398
Target Start/End: Original strand, 23833007 - 23833074
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttttattcaattt 398  Q
    |||| |||||||||||||||| ||||||||||||||||| | ||||||||| ||| |||||||||||||    
T  23833007 attccatttggtcccataagtcttaactttctcaaacacgt-ccttaacttttttattttattcaattt 23833074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 5033517 - 5033566
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  5033517 attcaatttggtcctataacttttaactttctcaaatacatcccttaact 5033566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 15496084 - 15496133
Alignment:
Q  330 attcaatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    ||||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  15496084 attcaatttggtcccataagtcttaactttcacaaacacgtcccttaact 15496133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 19577425 - 19577376
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaacttt 419  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||||||    
T  19577425 tcccttaacttatttcttttagtcaatttggtcccataactcttaacttt 19577376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 374 - 425
Target Start/End: Original strand, 5033501 - 5033552
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaa 425  Q
    |||||||||||||||||||||||||||||  |||| | ||||||||||||||    
T  5033501 ttaacttatttcttttattcaatttggtcctataacttttaactttctcaaa 5033552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 389 - 431
Target Start/End: Original strand, 15496083 - 15496125
Alignment:
Q  389 tattcaatttggtctcataagtcttaactttctcaaacacgtc 431  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  15496083 tattcaatttggtcccataagtcttaactttcacaaacacgtc 15496125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 334 - 379
Target Start/End: Complemental strand, 5034891 - 5034846
Alignment:
Q  334 aatttggtcccataagttttaactttctcaaacacatcccttaact 379  Q
    |||||||| | |||| ||||||||||||||||||||||||||||||    
T  5034891 aatttggttctataacttttaactttctcaaacacatcccttaact 5034846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 370 - 414
Target Start/End: Complemental strand, 43814680 - 43814636
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtctta 414  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||    
T  43814680 tcccctaacatatttcttttattcaatttggtctcataagactta 43814636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 495 - 561
Target Start/End: Complemental strand, 5034809 - 5034743
Alignment:
Q  495 agatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttacttt 561  Q
    ||||| ||||||||   ||||||| ||||||||| | |||||||||||||| | |||||||||||||    
T  5034809 agatcgttggataagagaggtctaacagattttagagtgtatcaccaacacttgatttatttacttt 5034743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 5034911 - 5034857
Alignment:
Q  374 ttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacac 428  Q
    ||||||||||||||||||| ||||||||   |||| | |||||||||||||||||    
T  5034911 ttaacttatttcttttatttaatttggttctataacttttaactttctcaaacac 5034857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 43631967 - 43632040
Alignment:
Q  99 aaaatagttttgaaagtagggtcaatttggaatttttg-tgttaaaatacaatagcggatccgaatccgctacc 171  Q
    ||||| ||||| ||| ||||||||| |||  ||||||  ||||||||| |||||||||||| ||||||||||||    
T  43631967 aaaatggttttaaaattagggtcaacttgcgatttttcctgttaaaatccaatagcggatcagaatccgctacc 43632040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 119; Significance: 2e-60; HSPs: 4)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 3126 - 2892
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||  |||||||||||||||||||||||| | |||||||||    
T  3126 tcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcagacacgtcccttaacttatttcttttattcaatttggtccaatttt 3027  T
Q  470 gatacttttaatcc-cctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttac--tttcttct 566  Q
    |||| |||||||||            ||| | || ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||  ||| ||||    
T  3026 gataattttaatccaaaaaaaaaaacagaccgttagattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttttttttct 2927  T
Q  567 tctttttccctcatattcatctacattcatccttc 601  Q
    |||| ||||||||| ||||||||||||||||||||    
T  2926 tcttcttccctcatcttcatctacattcatccttc 2892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 434 - 601
Target Start/End: Original strand, 1852 - 2018
Alignment:
Q  434 ttaacttatttcttttattcaattcgatccaattttgatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatg 533  Q
    |||||||||||||||||||||||| | ||||||||| ||| |||||||||          |||| | || ||| ||||| |||||| |||||||  | ||    
T  1852 ttaacttatttcttttattcaatttggtccaatttt-ataattttaatccaaaaaaaatatagaccgttagattacgaatgtctattagattttccagtg 1950  T
Q  534 tatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  1951 tatcaccaacacctaatttatttactttcttcttcttcttccctcatcttcatctacattcatccttc 2018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 289 - 402
Target Start/End: Complemental strand, 3147 - 3034
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||| ||  |||||||||        ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  3147 taggcttaattgatctgccagtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcagacacgtcccttaacttatttcttt 3048  T
Q  389 tattcaatttggtc 402  Q
    ||||||||||||||    
T  3047 tattcaatttggtc 3034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 370 - 402
Target Start/End: Original strand, 1848 - 1880
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtc 402  Q
    |||||||||||||||||||||||||||||||||    
T  1848 tcccttaacttatttcttttattcaatttggtc 1880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 103; Significance: 9e-51; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 31052 - 31283
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||| | |||| ||||    
T  31052 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctcaacttatttcttttactcaatttggtccagtttt 31151  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
     ||| ||||||||||||        ||| | |||||| ||| ||||||||||||||||||| ||||||||||||||||||||| |||  ||| ||| |||    
T  31152 tataattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttttttgttttattcatct 31251  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | ||||  ||| ||||||| | |||| |||||    
T  31252 tcttcctccatcttcatcttctttcaaccttc 31283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 370 - 552
Target Start/End: Complemental strand, 35384 - 35202
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  | ||||||||||||||| |||||| | |||||||||    
T  35384 tcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccctcaacttatttcttttactcaatttggtccaatttt 35285  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaattt 552  Q
     ||| ||||||||||||        ||| | |||||| ||| ||||||||||||||||| | |||||||||||||||||||||    
T  35284 tataattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaattt 35202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 31033 - 31144
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  31033 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctcaacttatttctttta 31132  T
Q  391 ttcaatttggtc 402  Q
     |||||||||||    
T  31133 ctcaatttggtc 31144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 35403 - 35292
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||| ||||  |||||||||        ||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  35403 ggcttaattgatctggcggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccctcaacttatttctttta 35304  T
Q  391 ttcaatttggtc 402  Q
     |||||||||||    
T  35303 ctcaatttggtc 35292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 103; Significance: 9e-51; HSPs: 4)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 370 - 601
Target Start/End: Complemental strand, 83760 - 83529
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||| | |||| ||||    
T  83760 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctcaacttatttcttttactcaatttggtccagtttt 83661  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
     ||| ||||||||||||        ||| | |||||| ||| ||||||||||||||||||| ||||||||||||||||||||| |||  ||| ||| |||    
T  83660 tataattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttttttgttttattcatct 83561  T
Q  570 ttttccctcatattcatctacattcatccttc 601  Q
    | ||||  ||| ||||||| | |||| |||||    
T  83560 tcttcctccatcttcatcttctttcaaccttc 83529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 370 - 552
Target Start/End: Original strand, 79428 - 79610
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  | ||||||||||||||| |||||| | |||||||||    
T  79428 tcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccctcaacttatttcttttactcaatttggtccaatttt 79527  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaattt 552  Q
     ||| ||||||||||||        ||| | |||||| ||| ||||||||||||||||| | |||||||||||||||||||||    
T  79528 tataattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaattt 79610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 79409 - 79520
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||| ||||  |||||||||        ||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  79409 ggcttaattgatctggcggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccctcaacttatttctttta 79508  T
Q  391 ttcaatttggtc 402  Q
     |||||||||||    
T  79509 ctcaatttggtc 79520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 83779 - 83668
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    ||||||||||||||||||||  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  83779 ggcttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctcaacttatttctttta 83680  T
Q  391 ttcaatttggtc 402  Q
     |||||||||||    
T  83679 ctcaatttggtc 83668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425 (Bit Score: 96; Significance: 1e-46; HSPs: 4)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 370 - 570
Target Start/End: Complemental strand, 1700 - 1500
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||| | |||||||||    
T  1700 tcccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacacgtcctttaatttatttcctttattcaatttggtccaatttt 1601  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| |||||||||| |        ||| | |||||| |   |||||||||||||||||   ||||| ||||||||||||||| ||||||||||||||||    
T  1600 gataattttaatcccttaaaaaaacagaccgttggattatagaggtctatcagattttacggtgtataaccaacacctaatttttttactttcttcttct 1501  T
Q  570 t 570  Q
    |    
T  1500 t 1500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 370 - 570
Target Start/End: Original strand, 153 - 352
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||| | || ||||||    
T  153 tcccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcctttaatttatttcctttattcaatttggtcaaatttt 252  T
Q  470 gatacttttaatcccctnnnnnnntagatcattggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttct 569  Q
    |||| ||||||| || |        ||| | |||||| ||  ||||||||||||||||| |  |||||||||||||||||||| |||||||| ||| |||    
T  253 gataattttaattccttaaaaaaagagaccgttggattacagaggtctatcagattttacagcgtatcaccaacacctaattt-tttactttattcatct 351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 1720 - 1608
Alignment:
Q  290 aggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttt 389  Q
    |||||||||||||||||||||  |||||||||        |||||||||||| |||||||| ||||||||||||||||| ||| |||| ||||||| |||    
T  1720 aggcttaattgatctgccggtcccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacacgtcctttaatttatttccttt 1621  T
Q  390 attcaatttggtc 402  Q
    |||||||||||||    
T  1620 attcaatttggtc 1608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 132 - 245
Alignment:
Q  289 taggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttcttt 388  Q
    ||||||||||||||||||| ||  |||||||||        |||||||||| |||||||||| ||||||||||||||||| ||| |||| ||||||| ||    
T  132 taggcttaattgatctgccagtcccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcctttaatttatttcctt 231  T
Q  389 tattcaatttggtc 402  Q
    ||||||||||||||    
T  232 tattcaatttggtc 245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 81; Significance: 1e-37; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 370 - 482
Target Start/End: Complemental strand, 25444 - 25332
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaattcgatccaatttt 469  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||| |||||||||||||| |||| | |||||||||    
T  25444 tcccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtcccttaatttatttcttttattaaatttggtccaatttt 25345  T
Q  470 gatacttttaatc 482  Q
    |||| ||||||||    
T  25344 gataattttaatc 25332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 25463 - 25352
Alignment:
Q  291 ggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttctttta 390  Q
    |||||||||||||||||| |  |||||||||        ||||||||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  25463 ggcttaattgatctgccgctcccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtcccttaatttatttctttta 25364  T
Q  391 ttcaatttggtc 402  Q
    || |||||||||    
T  25363 ttaaatttggtc 25352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 501 - 561
Target Start/End: Complemental strand, 25312 - 25252
Alignment:
Q  501 ttggataacgaaggtctatcagattttataatgtatcaccaacacctaatttatttacttt 561  Q
    |||||| ||| |||| ||||| |||||||| ||||| | ||||||||||||||||||||||    
T  25312 ttggattacggaggtttatcacattttatagtgtattatcaacacctaatttatttacttt 25252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 74; Significance: 2e-33; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 512 - 601
Target Start/End: Original strand, 104412 - 104501
Alignment:
Q  512 aggtctatcagattttataatgtatcaccaacacctaatttatttactttcttcttctttttccctcatattcatctacattcatccttc 601  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  104412 aggtctatcagattttatagtgtatcaccaacatctaatttatttactttcttcttcttcttccctcatcttcatctacattcatccttc 104501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 370 - 457
Target Start/End: Original strand, 104320 - 104407
Alignment:
Q  370 tcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcatttaacttatttcttttattcaatt 457  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||    
T  104320 tcccttaacttatttcttttattcaatttggtcccataagttttaacattctcaaacacgtcccttaacttatttcttttattcaatt 104407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 286 - 397
Target Start/End: Original strand, 104296 - 104407
Alignment:
Q  286 atttaggcttaattgatctgccggtttcttaacttannnnnnnnattcaatttggtcccataagttttaactttctcaaacacatcccttaacttatttc 385  Q
    ||||||||||||||||| || ||||  |||||||||        ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  104296 atttaggcttaattgatttgacggtcccttaacttatttcttttattcaatttggtcccataagttttaacattctcaaacacgtcccttaacttatttc 104395  T
Q  386 ttttattcaatt 397  Q
    ||||||||||||    
T  104396 ttttattcaatt 104407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 9307 - 9363
Alignment:
Q  501 ttggataacgaaggtctatcagattttataatgtatcaccaacacctaatttattta 557  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  9307 ttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttattta 9363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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