View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0946_low_20 (Length: 258)
Name: NF0946_low_20
Description: NF0946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0946_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 20492572 - 20492519
Alignment:
| Q |
38 |
gaagtattccaactggaaccacaggaaccttgtatcgatccgaagtattatcta |
91 |
Q |
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| T |
20492572 |
gaagtattccaactggaaccacaggaaccttgtatcgatccgaaatataatcta |
20492519 |
T |
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