View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0946_low_29 (Length: 217)

Name: NF0946_low_29
Description: NF0946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0946_low_29
NF0946_low_29
[»] chr2 (20 HSPs)
chr2 (45-217)||(23274429-23274601)
chr2 (75-217)||(19716452-19716594)
chr2 (75-217)||(19721015-19721157)
chr2 (94-217)||(23097453-23097576)
chr2 (46-213)||(20848426-20848592)
chr2 (141-211)||(28350807-28350877)
chr2 (75-202)||(12577219-12577346)
chr2 (141-211)||(21901469-21901539)
chr2 (140-202)||(22462931-22462993)
chr2 (81-202)||(24657108-24657229)
chr2 (140-202)||(11351161-11351223)
chr2 (140-201)||(23205245-23205306)
chr2 (140-201)||(23676849-23676910)
chr2 (75-202)||(24704932-24705059)
chr2 (140-202)||(23116509-23116571)
chr2 (99-202)||(23105177-23105280)
chr2 (150-195)||(22322799-22322844)
chr2 (150-195)||(24265311-24265356)
chr2 (150-195)||(24712975-24713020)
chr2 (144-192)||(24874210-24874258)
[»] scaffold0222 (2 HSPs)
scaffold0222 (45-217)||(21048-21220)
scaffold0222 (45-217)||(385-557)
[»] scaffold0317 (1 HSPs)
scaffold0317 (45-217)||(2865-3037)
[»] chr7 (29 HSPs)
chr7 (45-217)||(13676646-13676818)
chr7 (45-217)||(12459823-12459995)
chr7 (75-208)||(14283265-14283398)
chr7 (45-217)||(15099485-15099657)
chr7 (94-217)||(11385311-11385434)
chr7 (48-217)||(16947354-16947523)
chr7 (45-217)||(19150206-19150378)
chr7 (45-217)||(20749605-20749777)
chr7 (46-217)||(21755608-21755779)
chr7 (46-217)||(26091680-26091851)
chr7 (66-217)||(26115472-26115623)
chr7 (46-217)||(40924699-40924870)
chr7 (48-217)||(13024542-13024711)
chr7 (46-198)||(12712564-12712716)
chr7 (94-217)||(13965550-13965673)
chr7 (46-217)||(49155497-49155668)
chr7 (75-208)||(14144886-14145019)
chr7 (45-217)||(14261128-14261300)
chr7 (45-217)||(12798386-12798555)
chr7 (139-211)||(12203688-12203760)
chr7 (75-202)||(18050850-18050977)
chr7 (132-202)||(11984273-11984343)
chr7 (140-202)||(9591653-9591715)
chr7 (137-203)||(15627810-15627876)
chr7 (140-202)||(16726360-16726422)
chr7 (140-202)||(17703374-17703436)
chr7 (150-195)||(8710904-8710949)
chr7 (150-195)||(13689340-13689385)
chr7 (150-195)||(15157983-15158028)
[»] scaffold0034 (3 HSPs)
scaffold0034 (45-217)||(1850-2022)
scaffold0034 (60-217)||(11804-11961)
scaffold0034 (123-207)||(70684-70768)
[»] scaffold0010 (4 HSPs)
scaffold0010 (45-217)||(39231-39403)
scaffold0010 (51-201)||(180753-180903)
scaffold0010 (140-202)||(14753-14815)
scaffold0010 (140-194)||(5244-5298)
[»] chr8 (19 HSPs)
chr8 (45-217)||(22027618-22027790)
chr8 (46-217)||(28984183-28984354)
chr8 (99-217)||(16268562-16268680)
chr8 (48-217)||(31413870-31414039)
chr8 (75-217)||(22054164-22054306)
chr8 (45-217)||(29300764-29300936)
chr8 (54-209)||(22374149-22374304)
chr8 (81-217)||(19985487-19985623)
chr8 (141-211)||(6606813-6606883)
chr8 (142-211)||(20391454-20391523)
chr8 (140-202)||(30310497-30310559)
chr8 (94-209)||(21928748-21928863)
chr8 (140-202)||(21391214-21391276)
chr8 (140-202)||(21780540-21780602)
chr8 (140-202)||(22043193-22043255)
chr8 (140-202)||(32603511-32603573)
chr8 (144-195)||(17671382-17671433)
chr8 (140-203)||(21671881-21671944)
chr8 (140-172)||(22421276-22421308)
[»] chr3 (47 HSPs)
chr3 (45-217)||(12357650-12357822)
chr3 (45-217)||(18131470-18131642)
chr3 (45-217)||(31941737-31941909)
chr3 (75-217)||(14290655-14290797)
chr3 (48-217)||(17494484-17494652)
chr3 (45-217)||(31692308-31692480)
chr3 (46-217)||(10408803-10408974)
chr3 (46-217)||(47126779-47126950)
chr3 (46-214)||(16326833-16327003)
chr3 (45-158)||(11949107-11949220)
chr3 (94-213)||(17189257-17189376)
chr3 (66-217)||(28757174-28757325)
chr3 (94-212)||(24190187-24190305)
chr3 (45-217)||(16825402-16825574)
chr3 (75-217)||(16384495-16384637)
chr3 (99-217)||(16831651-16831769)
chr3 (48-211)||(11958310-11958473)
chr3 (45-217)||(35983015-35983187)
chr3 (48-213)||(12181181-12181346)
chr3 (123-207)||(13317702-13317786)
chr3 (141-211)||(2037041-2037111)
chr3 (141-211)||(2040782-2040852)
chr3 (141-211)||(14039676-14039746)
chr3 (141-211)||(15008713-15008783)
chr3 (75-202)||(8744528-8744655)
chr3 (75-202)||(13944888-13945015)
chr3 (139-217)||(15230531-15230609)
chr3 (139-217)||(15236399-15236477)
chr3 (75-217)||(12857619-12857761)
chr3 (120-186)||(10417199-10417265)
chr3 (140-202)||(23079166-23079228)
chr3 (132-202)||(23414939-23415009)
chr3 (140-202)||(11861272-11861334)
chr3 (76-202)||(12501788-12501914)
chr3 (140-202)||(15065990-15066052)
chr3 (140-202)||(16804096-16804158)
chr3 (140-203)||(12843251-12843314)
chr3 (140-202)||(16695083-16695145)
chr3 (140-202)||(17497610-17497672)
chr3 (150-195)||(5110565-5110610)
chr3 (150-195)||(10008529-10008574)
chr3 (150-195)||(15345401-15345446)
chr3 (150-195)||(20059210-20059255)
chr3 (150-190)||(10909139-10909179)
chr3 (144-192)||(15399677-15399725)
chr3 (150-190)||(15713217-15713257)
chr3 (144-192)||(24186113-24186161)
[»] scaffold0367 (1 HSPs)
scaffold0367 (45-217)||(8919-9091)
[»] chr6 (26 HSPs)
chr6 (45-217)||(24515454-24515626)
chr6 (42-217)||(18797756-18797931)
chr6 (45-217)||(10465888-10466060)
chr6 (45-214)||(14376959-14377128)
chr6 (48-217)||(19456095-19456264)
chr6 (48-217)||(19466240-19466409)
chr6 (94-217)||(21567031-21567154)
chr6 (75-217)||(19438101-19438243)
chr6 (66-217)||(24367490-24367641)
chr6 (46-198)||(34642645-34642797)
chr6 (141-211)||(16813805-16813875)
chr6 (141-217)||(8720745-8720821)
chr6 (144-209)||(21474768-21474833)
chr6 (141-211)||(19486340-19486410)
chr6 (153-217)||(25771021-25771085)
chr6 (51-207)||(15462411-15462567)
chr6 (140-203)||(23081587-23081650)
chr6 (140-203)||(30678078-30678141)
chr6 (140-202)||(21764976-21765038)
chr6 (154-211)||(25958799-25958856)
chr6 (84-197)||(27559029-27559142)
chr6 (60-207)||(20010551-20010699)
chr6 (140-195)||(5836290-5836345)
chr6 (140-202)||(18404999-18405061)
chr6 (153-202)||(25756670-25756719)
chr6 (144-192)||(25115720-25115768)
[»] scaffold0664 (1 HSPs)
scaffold0664 (75-217)||(7302-7444)
[»] chr1 (23 HSPs)
chr1 (45-214)||(20832870-20833039)
chr1 (45-217)||(19857525-19857697)
chr1 (46-214)||(21961279-21961447)
chr1 (46-217)||(20297635-20297806)
chr1 (48-217)||(24096582-24096751)
chr1 (46-217)||(52988993-52989164)
chr1 (46-217)||(38909793-38909964)
chr1 (46-217)||(48426125-48426296)
chr1 (46-211)||(20074682-20074847)
chr1 (46-214)||(31536967-31537135)
chr1 (75-217)||(21739003-21739145)
chr1 (45-217)||(21742519-21742691)
chr1 (66-217)||(37680321-37680472)
chr1 (48-217)||(22015712-22015881)
chr1 (141-211)||(18273114-18273184)
chr1 (60-207)||(20853737-20853884)
chr1 (140-202)||(21228538-21228600)
chr1 (137-194)||(16379406-16379463)
chr1 (140-202)||(24784839-24784901)
chr1 (140-202)||(22435715-22435777)
chr1 (141-195)||(33388018-33388072)
chr1 (150-195)||(21833627-21833672)
chr1 (144-192)||(21842531-21842579)
[»] scaffold0706 (1 HSPs)
scaffold0706 (45-209)||(5115-5279)
[»] scaffold0167 (1 HSPs)
scaffold0167 (45-217)||(5287-5459)
[»] scaffold0011 (2 HSPs)
scaffold0011 (45-217)||(153726-153898)
scaffold0011 (140-194)||(23454-23508)
[»] scaffold0004 (3 HSPs)
scaffold0004 (50-217)||(319482-319649)
scaffold0004 (45-213)||(325941-326109)
scaffold0004 (141-191)||(200401-200451)
[»] chr4 (24 HSPs)
chr4 (46-217)||(7357473-7357644)
chr4 (51-217)||(16150847-16151013)
chr4 (51-217)||(16154993-16155159)
chr4 (45-217)||(18259646-18259818)
chr4 (46-217)||(3261689-3261860)
chr4 (45-217)||(20893236-20893408)
chr4 (75-217)||(44658761-44658903)
chr4 (48-217)||(15266984-15267153)
chr4 (94-214)||(11204130-11204250)
chr4 (46-217)||(29450432-29450603)
chr4 (45-217)||(14993262-14993434)
chr4 (76-209)||(15073595-15073728)
chr4 (45-207)||(27903590-27903752)
chr4 (75-202)||(51603702-51603829)
chr4 (75-202)||(53750380-53750507)
chr4 (141-203)||(8708978-8709040)
chr4 (99-211)||(13879368-13879480)
chr4 (140-202)||(18224123-18224185)
chr4 (140-202)||(13513650-13513712)
chr4 (140-203)||(8336-8399)
chr4 (140-203)||(14697401-14697464)
chr4 (145-203)||(15685-15743)
chr4 (140-202)||(18604469-18604531)
chr4 (150-195)||(14300636-14300681)
[»] scaffold0420 (1 HSPs)
scaffold0420 (48-214)||(8851-9017)
[»] scaffold0203 (1 HSPs)
scaffold0203 (45-205)||(764-924)
[»] scaffold0106 (1 HSPs)
scaffold0106 (45-217)||(34571-34743)
[»] scaffold1426 (1 HSPs)
scaffold1426 (46-217)||(1505-1676)
[»] scaffold0020 (2 HSPs)
scaffold0020 (75-217)||(98481-98623)
scaffold0020 (54-209)||(176230-176385)
[»] scaffold1032 (1 HSPs)
scaffold1032 (48-217)||(713-882)
[»] chr5 (34 HSPs)
chr5 (48-217)||(23077982-23078151)
chr5 (46-217)||(20345402-20345573)
chr5 (46-217)||(22505799-22505970)
chr5 (45-217)||(23563245-23563417)
chr5 (46-217)||(25851192-25851363)
chr5 (46-217)||(14884068-14884239)
chr5 (75-202)||(17266426-17266553)
chr5 (141-211)||(16258119-16258189)
chr5 (141-211)||(22591838-22591908)
chr5 (141-211)||(22595393-22595463)
chr5 (141-211)||(23669847-23669917)
chr5 (140-217)||(21870355-21870432)
chr5 (140-217)||(21874635-21874712)
chr5 (140-202)||(18782346-18782408)
chr5 (60-186)||(28892050-28892176)
chr5 (120-201)||(20824647-20824728)
chr5 (143-211)||(21561108-21561176)
chr5 (143-211)||(21983260-21983328)
chr5 (99-186)||(20779086-20779173)
chr5 (60-207)||(22465084-22465231)
chr5 (144-211)||(43122685-43122752)
chr5 (140-202)||(23526283-23526345)
chr5 (141-202)||(20803830-20803891)
chr5 (150-195)||(41774084-41774129)
chr5 (140-203)||(26735819-26735882)
chr5 (137-195)||(21631498-21631556)
chr5 (140-202)||(23461203-23461265)
chr5 (140-194)||(23474426-23474480)
chr5 (150-195)||(14996838-14996883)
chr5 (150-195)||(19773202-19773247)
chr5 (150-195)||(22329986-22330031)
chr5 (150-195)||(27521648-27521693)
chr5 (150-195)||(27682499-27682544)
chr5 (144-192)||(22351155-22351203)
[»] scaffold0243 (2 HSPs)
scaffold0243 (45-217)||(9670-9842)
scaffold0243 (140-216)||(23844-23920)
[»] scaffold0156 (1 HSPs)
scaffold0156 (45-217)||(37173-37345)
[»] scaffold0058 (1 HSPs)
scaffold0058 (45-217)||(22356-22528)
[»] scaffold2165 (1 HSPs)
scaffold2165 (46-217)||(701-872)
[»] scaffold0118 (1 HSPs)
scaffold0118 (46-217)||(696-867)
[»] scaffold0001 (1 HSPs)
scaffold0001 (46-217)||(514251-514422)
[»] scaffold0348 (2 HSPs)
scaffold0348 (75-217)||(4747-4889)
scaffold0348 (82-217)||(17382-17517)
[»] scaffold0017 (2 HSPs)
scaffold0017 (75-217)||(4351-4493)
scaffold0017 (84-202)||(16979-17097)
[»] scaffold0235 (2 HSPs)
scaffold0235 (45-214)||(8363-8532)
scaffold0235 (45-214)||(18577-18746)
[»] scaffold0009 (2 HSPs)
scaffold0009 (48-217)||(251856-252025)
scaffold0009 (140-202)||(229765-229827)
[»] scaffold1517 (1 HSPs)
scaffold1517 (45-217)||(1385-1557)
[»] scaffold0067 (4 HSPs)
scaffold0067 (54-217)||(64500-64663)
scaffold0067 (54-217)||(49078-49241)
scaffold0067 (54-217)||(58112-58275)
scaffold0067 (45-217)||(29858-30030)
[»] scaffold0029 (2 HSPs)
scaffold0029 (46-217)||(115797-115968)
scaffold0029 (120-201)||(93808-93889)
[»] scaffold0310 (1 HSPs)
scaffold0310 (45-211)||(11211-11377)
[»] scaffold2062 (1 HSPs)
scaffold2062 (48-217)||(770-939)
[»] scaffold0266 (1 HSPs)
scaffold0266 (45-217)||(16871-17043)
[»] scaffold0108 (1 HSPs)
scaffold0108 (45-217)||(50339-50511)
[»] scaffold0076 (1 HSPs)
scaffold0076 (45-217)||(53321-53493)
[»] scaffold0072 (1 HSPs)
scaffold0072 (45-201)||(54281-54437)
[»] scaffold0056 (1 HSPs)
scaffold0056 (45-217)||(781-953)
[»] scaffold0023 (3 HSPs)
scaffold0023 (45-217)||(164299-164471)
scaffold0023 (140-202)||(30487-30549)
scaffold0023 (140-216)||(43352-43428)
[»] scaffold0041 (1 HSPs)
scaffold0041 (46-217)||(41970-42141)
[»] scaffold0035 (1 HSPs)
scaffold0035 (48-217)||(6042-6211)
[»] scaffold1433 (1 HSPs)
scaffold1433 (57-217)||(1209-1369)
[»] scaffold0751 (1 HSPs)
scaffold0751 (45-213)||(5415-5583)
[»] scaffold0476 (1 HSPs)
scaffold0476 (94-214)||(446-566)
[»] scaffold0404 (1 HSPs)
scaffold0404 (57-217)||(7990-8150)
[»] scaffold0335 (1 HSPs)
scaffold0335 (45-217)||(4202-4374)
[»] scaffold0146 (1 HSPs)
scaffold0146 (45-217)||(182-354)
[»] scaffold0074 (1 HSPs)
scaffold0074 (45-217)||(15306-15478)
[»] scaffold1299 (1 HSPs)
scaffold1299 (94-217)||(1746-1869)
[»] scaffold0114 (1 HSPs)
scaffold0114 (75-217)||(40322-40464)
[»] scaffold0054 (1 HSPs)
scaffold0054 (76-217)||(63417-63558)
[»] scaffold0053 (2 HSPs)
scaffold0053 (77-202)||(65211-65336)
scaffold0053 (75-217)||(62670-62812)
[»] scaffold0276 (1 HSPs)
scaffold0276 (66-217)||(23821-23972)
[»] scaffold0261 (2 HSPs)
scaffold0261 (45-176)||(12351-12482)
scaffold0261 (45-176)||(20531-20662)
[»] scaffold0151 (1 HSPs)
scaffold0151 (82-217)||(440-575)
[»] scaffold0104 (1 HSPs)
scaffold0104 (54-217)||(43317-43480)
[»] scaffold0005 (1 HSPs)
scaffold0005 (81-208)||(263496-263623)
[»] scaffold1845 (1 HSPs)
scaffold1845 (117-214)||(1205-1302)
[»] scaffold0708 (1 HSPs)
scaffold0708 (48-217)||(5043-5212)
[»] scaffold0239 (1 HSPs)
scaffold0239 (75-208)||(9694-9827)
[»] scaffold0190 (1 HSPs)
scaffold0190 (48-217)||(30224-30393)
[»] scaffold0523 (2 HSPs)
scaffold0523 (75-211)||(5704-5840)
scaffold0523 (46-215)||(11643-11812)
[»] scaffold0068 (1 HSPs)
scaffold0068 (46-214)||(67009-67177)
[»] scaffold0765 (1 HSPs)
scaffold0765 (54-217)||(6155-6318)
[»] scaffold0003 (2 HSPs)
scaffold0003 (81-208)||(203651-203778)
scaffold0003 (140-200)||(424637-424697)
[»] scaffold1056 (1 HSPs)
scaffold1056 (75-217)||(1984-2126)
[»] scaffold1530 (1 HSPs)
scaffold1530 (108-217)||(801-910)
[»] scaffold0046 (1 HSPs)
scaffold0046 (45-217)||(70342-70514)
[»] scaffold0102 (2 HSPs)
scaffold0102 (75-217)||(42962-43104)
scaffold0102 (75-202)||(50258-50385)
[»] scaffold0026 (1 HSPs)
scaffold0026 (76-209)||(51916-52049)
[»] scaffold0434 (1 HSPs)
scaffold0434 (140-217)||(5800-5877)
[»] scaffold0088 (1 HSPs)
scaffold0088 (46-202)||(30169-30325)
[»] scaffold0443 (1 HSPs)
scaffold0443 (66-190)||(12052-12176)
[»] scaffold0405 (1 HSPs)
scaffold0405 (75-209)||(5866-6000)
[»] scaffold0031 (1 HSPs)
scaffold0031 (123-217)||(115936-116030)
[»] scaffold0188 (1 HSPs)
scaffold0188 (153-217)||(33270-33334)
[»] scaffold0180 (1 HSPs)
scaffold0180 (116-211)||(30917-31012)
[»] scaffold0609 (2 HSPs)
scaffold0609 (141-211)||(1269-1339)
scaffold0609 (162-211)||(7908-7957)
[»] scaffold0044 (1 HSPs)
scaffold0044 (140-202)||(17489-17551)
[»] scaffold0161 (1 HSPs)
scaffold0161 (139-211)||(36156-36228)
[»] scaffold0100 (1 HSPs)
scaffold0100 (140-203)||(16521-16584)
[»] scaffold1220 (1 HSPs)
scaffold1220 (76-202)||(1-127)
[»] scaffold0289 (1 HSPs)
scaffold0289 (140-202)||(117-179)
[»] scaffold0019 (1 HSPs)
scaffold0019 (140-202)||(171447-171509)
[»] scaffold1914 (1 HSPs)
scaffold1914 (99-200)||(1145-1246)
[»] scaffold0309 (1 HSPs)
scaffold0309 (45-130)||(12961-13046)
[»] scaffold2059 (1 HSPs)
scaffold2059 (140-216)||(668-744)
[»] scaffold0509 (1 HSPs)
scaffold0509 (145-197)||(12162-12214)
[»] scaffold0490 (1 HSPs)
scaffold0490 (161-217)||(3215-3271)
[»] scaffold0993 (1 HSPs)
scaffold0993 (140-199)||(1311-1370)
[»] scaffold0819 (1 HSPs)
scaffold0819 (142-201)||(445-504)
[»] scaffold0605 (1 HSPs)
scaffold0605 (120-207)||(1589-1676)
[»] scaffold0550 (1 HSPs)
scaffold0550 (76-202)||(10071-10197)
[»] scaffold0130 (2 HSPs)
scaffold0130 (144-211)||(3796-3863)
scaffold0130 (140-198)||(7696-7754)
[»] scaffold0079 (1 HSPs)
scaffold0079 (75-202)||(36762-36889)
[»] scaffold0040 (2 HSPs)
scaffold0040 (140-203)||(18174-18237)
scaffold0040 (140-203)||(110819-110882)
[»] scaffold1881 (1 HSPs)
scaffold1881 (140-202)||(393-455)
[»] scaffold0546 (1 HSPs)
scaffold0546 (140-202)||(208-270)
[»] scaffold0451 (1 HSPs)
scaffold0451 (140-202)||(13945-14007)
[»] scaffold0285 (1 HSPs)
scaffold0285 (140-202)||(5327-5389)
[»] scaffold0273 (1 HSPs)
scaffold0273 (140-202)||(369-431)
[»] scaffold0192 (1 HSPs)
scaffold0192 (123-209)||(29839-29925)
[»] scaffold0109 (2 HSPs)
scaffold0109 (140-202)||(13037-13099)
scaffold0109 (140-192)||(41484-41536)
[»] scaffold0081 (2 HSPs)
scaffold0081 (153-202)||(21946-21995)
scaffold0081 (153-202)||(37370-37419)
[»] scaffold0006 (1 HSPs)
scaffold0006 (146-203)||(104561-104618)
[»] scaffold0008 (2 HSPs)
scaffold0008 (140-216)||(139509-139585)
scaffold0008 (140-211)||(179-250)
[»] scaffold0270 (2 HSPs)
scaffold0270 (140-203)||(7202-7265)
scaffold0270 (140-203)||(14332-14395)
[»] scaffold0075 (2 HSPs)
scaffold0075 (140-203)||(48059-48122)
scaffold0075 (145-203)||(55383-55441)
[»] scaffold1423 (1 HSPs)
scaffold1423 (140-202)||(291-353)
[»] scaffold0611 (1 HSPs)
scaffold0611 (140-202)||(9356-9418)
[»] scaffold0293 (1 HSPs)
scaffold0293 (140-194)||(15739-15793)
[»] scaffold0181 (1 HSPs)
scaffold0181 (84-202)||(28841-28959)
[»] scaffold0177 (2 HSPs)
scaffold0177 (140-202)||(11269-11331)
scaffold0177 (140-202)||(14954-15016)
[»] scaffold0080 (3 HSPs)
scaffold0080 (140-202)||(10152-10214)
scaffold0080 (140-202)||(12807-12869)
scaffold0080 (140-202)||(32208-32270)
[»] scaffold0042 (1 HSPs)
scaffold0042 (137-195)||(26678-26736)
[»] scaffold0012 (1 HSPs)
scaffold0012 (140-194)||(216341-216395)
[»] scaffold0865 (1 HSPs)
scaffold0865 (144-209)||(1178-1243)
[»] scaffold0518 (1 HSPs)
scaffold0518 (175-208)||(2195-2228)
[»] scaffold0305 (1 HSPs)
scaffold0305 (81-202)||(3134-3255)
[»] scaffold0165 (1 HSPs)
scaffold0165 (45-134)||(12194-12283)
[»] scaffold0133 (1 HSPs)
scaffold0133 (144-209)||(28191-28256)
[»] scaffold0431 (1 HSPs)
scaffold0431 (144-192)||(10701-10749)
[»] scaffold0413 (1 HSPs)
scaffold0413 (140-172)||(3871-3903)
[»] scaffold0357 (1 HSPs)
scaffold0357 (140-172)||(17920-17952)
[»] scaffold0282 (1 HSPs)
scaffold0282 (140-192)||(13397-13449)
[»] scaffold0098 (1 HSPs)
scaffold0098 (147-215)||(25808-25876)


Alignment Details
Target: chr2 (Bit Score: 141; Significance: 4e-74; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 23274429 - 23274601
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  23274429 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagcacttcttctcatctttagtacaaa 23274528  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||    
T  23274529 cattactcttgtggcctttctcaccacacttgttgcaaacaatttcagtaggagcatctctcctcttgggcct 23274601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 19716594 - 19716452
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||||||||   ||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  19716594 cgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacact 19716495  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||||||| ||||||||||||||||||||||| ||||||||    
T  19716494 tgtaacaaacgatctcagcaggagcatctctcctattgggcct 19716452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 19721157 - 19721015
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||||||||   ||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  19721157 cgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacact 19721058  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||||||| ||||||||||||||||||||||| ||||||||    
T  19721057 tgtaacaaacgatctcagcaggagcatctctcctattgggcct 19721015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 23097576 - 23097453
Alignment:
Q  94 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagc 193  Q
    ||||||| ||||| |||||| | ||||| ||||||| |||||| ||||||||||||||||||||||||||||| ||||||||  | ||||| ||||||||    
T  23097576 tgtgtcctttctgaccacacttgaagcacttcttctgatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagc 23097477  T
Q  194 aggagcatctctcctcttgggcct 217  Q
    ||||||||||||||||||||||||    
T  23097476 aggagcatctctcctcttgggcct 23097453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 20848426 - 20848592
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  20848426 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 20848525  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgg 213  Q
    |||||| |||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||    
T  20848526 attactcttgtggcctttctcaccacacttgtagc-aacaatctcaacaggagcatctctcctcttgg 20848592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 28350807 - 28350877
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  28350807 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggaacatctctcctctt 28350877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 202
Target Start/End: Original strand, 12577219 - 12577346
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  12577219 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 12577318  T
Q  175 tgtaacaaacaatctcagcaggagcatc 202  Q
    |  | || || |||||||||||||||||    
T  12577319 taaagcacactatctcagcaggagcatc 12577346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 21901469 - 21901539
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||| |||| ||||||| |||||    
T  21901469 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctctt 21901539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 22462993 - 22462931
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  22462993 acaaacattactcttgtggcctttctcaccacagttgaaacaaacaatctccgcaggagcatc 22462931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 202
Target Start/End: Complemental strand, 24657229 - 24657108
Alignment:
Q  81 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaac 180  Q
    |||||||||||| |||| |||||||  |||||||  || || |||||| | || | || ||||||| |||| |||||||||||||||||||| ||| |||    
T  24657229 caatcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattgaaac 24657130  T
Q  181 aaacaatctcagcaggagcatc 202  Q
    ||  ||||||||||||| ||||    
T  24657129 aagtaatctcagcaggaacatc 24657108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 11351223 - 11351161
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||||||||| ||| |||| |||||||| |||||||||||    
T  11351223 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatc 11351161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 23205245 - 23205306
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcat 201  Q
    |||||||||||| |||||||||||||| ||||| ||| ||||||||||||| | ||||||||    
T  23205245 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23205306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 23676849 - 23676910
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcat 201  Q
    |||||||||||| |||||||||||||| ||||| ||| ||||||||||||| | ||||||||    
T  23676849 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23676910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 202
Target Start/End: Complemental strand, 24705059 - 24704932
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| |||||||||||  |||| |||||||  ||||||   || ||||||||  | || | || ||||||||| || |||||||||||||||||||| |    
T  24705059 cgcttgcaatcagctaaagtgtgacccttcttgccacactggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcaccacaat 24704960  T
Q  175 tgtaacaaacaatctcagcaggagcatc 202  Q
    || |||| | ||||||||||||| ||||    
T  24704959 tgaaacagataatctcagcaggaacatc 24704932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 23116571 - 23116509
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||| | ||||| ||| ||||||||||||| | |||||||||    
T  23116571 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatctctgaaggagcatc 23116509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 23105280 - 23105177
Alignment:
Q  99 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggag 198  Q
    ||||||| |||||| | ||| ||| ||||  | |||| || |||| ||||||| |||||||| |||||||||||   | |||||| ||||||||||||||    
T  23105280 cccttctttccacagcgaaaacatctcttgacgtcttaaggacaagcattactcttgtggcccttctcaccacaagagaaacaaataatctcagcaggag 23105181  T
Q  199 catc 202  Q
    ||||    
T  23105180 catc 23105177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 22322844 - 22322799
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  22322844 cttttgtggcctttctcaccacaattgaaacacacaatctccgcag 22322799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 24265311 - 24265356
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  24265311 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 24265356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 24712975 - 24713020
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  24712975 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 24713020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 24874258 - 24874210
Alignment:
Q  144 acattacttttgtggcctttctcaccacacttgtaacaaacaatctcag 192  Q
    ||||| ||||||||||||||| ||||||| ||| |||| ||||||||||    
T  24874258 acattgcttttgtggcctttcccaccacagttgaaacacacaatctcag 24874210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 21048 - 21220
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  21048 tcattgcagttatagcaaattatgtctccccgcttacaatcaactaatgtgtgtcccttctgtccacacctgaagcacttcttctcacctttagtacaaa 21147  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  21148 cattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcagaagcatctctcctcttgggcct 21220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 557 - 385
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||||||||| |  || || ||||| ||||||||||   ||||||| ||||| |||||||| || || ||||||||||| || |||||||    
T  557 tcattgcagttatagcaaacaacatcaccacgcttgcaatcagctaggctgtgtcctttctgaccacacctgaaacacttcttctcatccttggtacaaa 458  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||| ||| ||||||||||||   ||||| ||||||||||| ||||||||||||||||||||||| ||||||||    
T  457 catcactcttgtggcctttcctgccacatttgtaacaaacgatctcagcaggagcatctctcctattgggcct 385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 2865 - 3037
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| | |||||||||||||||  |||||    
T  2865 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagaacttcttctcatctttatcacaaa 2964  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  2965 cattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcct 3037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 2e-69; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 13676646 - 13676818
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| | |||||||||||||||  |||||    
T  13676646 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagtacttcttctcatctttatcacaaa 13676745  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  13676746 cattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcct 13676818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 12459823 - 12459995
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||||||||||||||| || ||||| || |||||||| |||||||   ||||||||||||| ||||||||||| |||||| |||||||| ||  ||||     
T  12459823 tcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtcccttctgaccacacctaaaacatttcctctcatctctaccacaag 12459922  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||| || ||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  12459923 cattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatctctcctcttgggcct 12459995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 14283398 - 14283265
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| |||||||||||| |||| |||||||| |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  14283398 cgcttgcaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacact 14283299  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcct 208  Q
    |||||||||||| |||||||||||||||||||||    
T  14283298 tgtaacaaacaacctcagcaggagcatctctcct 14283265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 15099657 - 15099485
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| ||||| || |||||||||||| |||   ||||||||||||| |||||||| ||||| |||||||||||| ||  |||||    
T  15099657 tcattgcagttataacaaacgatgtccccacgcttacaatcatctagagtgtgtcccttctgaccacacctgaagcacttcttctcatctctatcacaaa 15099558  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    | ||||| |||||||||||||||||||||||| | ||||| || |||| ||||||||||||||||||||||||    
T  15099557 cgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggagcatctctcctcttgggcct 15099485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 11385434 - 11385311
Alignment:
Q  94 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagc 193  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||| ||||||||    
T  11385434 tgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaactatctcagc 11385335  T
Q  194 aggagcatctctcctcttgggcct 217  Q
    ||||||||||||||||||||||||    
T  11385334 aggagcatctctcctcttgggcct 11385311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 16947523 - 16947354
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    |||||||| |||||||| |||||||| |||||||| ||||||| | ||||||| ||||| ||||||||||  || ||| |||||||| ||  |||| |||    
T  16947523 ttgcagttgtagcaaacaatgtctccacgcttacattcagctagtgtgtgtcctttctgaccacacctaacacacttcctctcatctctaccacaagcat 16947424  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||| ||||||||||| ||||||||||||||||||||||| ||| | |||||||||||||||||||||||    
T  16947423 tactcttgtggcctttttcaccacacttgtaacaaacaatttcaactggagcatctctcctcttgggcct 16947354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 19150206 - 19150378
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||| ||||| |||||||| || ||||| ||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||| ||||  |  ||| |    
T  19150206 tcattacagttgtagcaaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatctcgatcacaca 19150305  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||||||||||||| | |||||||| |||| |||||||||||||||||| |||||    
T  19150306 cattactgttgtggcctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcct 19150378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 20749605 - 20749777
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||| ||||| |||||||| || ||||| ||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||| ||||  |  ||| |    
T  20749605 tcattacagttgtagcaaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatctcgatcacaca 20749704  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||||||||||||| | |||||||| |||| |||||||||||||||||| |||||    
T  20749705 cattactgttgtggcctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcct 20749777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 21755608 - 21755779
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| ||||| || || || || |||||||| ||||||||  |||| |||||||| |||||||| || || ||| |||||||||||  ||||||    
T  21755608 cattgcagttgtagcagacaatatccccacgcttacattcagctaaagtgtgacccttctgaccacacctgaaacacttcctctcatctttaccacaaac 21755707  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||| || ||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  21755708 attgctcttgtggcctttttcaccacacttgtaacaaacaatctcagagggagcatctctcctcttaggcct 21755779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 217
Target Start/End: Complemental strand, 26091851 - 26091680
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  26091851 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 26091752  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  26091751 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcct 26091680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 26115623 - 26115472
Alignment:
Q  66 atgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 165  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  26115623 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 26115524  T
Q  166 caccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26115523 caccacacttgtaacaaacaatctcagccggagcatctctcctcttgggcct 26115472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 217
Target Start/End: Complemental strand, 40924870 - 40924699
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  40924870 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 40924771  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  40924770 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcct 40924699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 48 - 217
Target Start/End: Original strand, 13024542 - 13024711
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    |||||||| ||||| || |||||||| |||||||| |||||||   ||||||| ||||  |||||||| || |||||| |||||| | ||  | || |||    
T  13024542 ttgcagttgtagcagacaatgtctccacgcttacattcagctagggtgtgtcctttctaaccacacctgaaacatttcctctcatatctaccataagcat 13024641  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    | |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13024642 tgcttttgtggcctttttcaccacacttgtaacaaacaatttcagcaggagcatctctcctcttgggcct 13024711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 46 - 198
Target Start/End: Complemental strand, 12712716 - 12712564
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||||||||| || || || || || || ||||||||||| | ||| ||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  12712716 cattgcagttatagcatacaatatcaccacgtttgcaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaac 12712617  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggag 198  Q
    ||||||||||||||||||||| ||||||||  | ||||| |||||| ||||||    
T  12712616 attacttttgtggcctttctcgccacacttaaagcaaactatctcaacaggag 12712564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 13965673 - 13965550
Alignment:
Q  94 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagc 193  Q
    |||| |||||||| |||||||| ||||||||  | |||||||||  |||||||||||| |||||| ||||||||||||||||||| ||| ||||||||||    
T  13965673 tgtgacccttctgaccacacctgaagcattttctatcatctttaccacaaacattactcttgtggtctttctcaccacacttgtagcaatcaatctcagc 13965574  T
Q  194 aggagcatctctcctcttgggcct 217  Q
    ||||||||||||||||||||||||    
T  13965573 aggagcatctctcctcttgggcct 13965550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 49155497 - 49155668
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  | || |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  49155497 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactatgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 49155596  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  49155597 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcct 49155668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 14144886 - 14145019
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||||||||| | ||| ||||| || |||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| ||| |||    
T  14144886 cgcttgcaatcagctaacacgtgacccttttgaccacacctgaagcacttcttctcctccttggtacaaacgttactcttgtggcctttctcgccatact 14144985  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcct 208  Q
    |  ||||||| |||||||||||||||||||||||    
T  14144986 taaaacaaactatctcagcaggagcatctctcct 14145019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 14261300 - 14261128
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||| ||||| |||||||| || || || ||||| |||||||| ||| ||||||| ||||| | |||||||||| | ||||||||||||  |  ||  |    
T  14261300 tcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgactacacctaaagtacttcttctcatctcgatgacgca 14261201  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||||||||||||| | |||| |||||||| |||||||| ||||| ||| |||||    
T  14261200 cattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatatctccccttaggcct 14261128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 12798555 - 12798386
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||| ||||| |||||||| |  || || |||| ||||||||||||  ||||||| ||||| |||||||| ||||| ||||||||||||     |||||    
T  12798555 tcattacagttgtagcaaacaacatccccacgctcacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctcggtcacaaa 12798456  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||    ||||||||| |||||||||| |||| | ||||||||||||||||| ||||    
T  12798455 cattactcttgtggccttt---tccacacttgaaacaaacaatatcagtatgagcatctctcctcttgagcct 12798386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 12203760 - 12203688
Alignment:
Q  139 tacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  12203760 tacaaacattactcttgtggcccttctcaccacacttgtagcaaacaatcacagcaggaacatctctcctctt 12203688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 202
Target Start/End: Complemental strand, 18050977 - 18050850
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  18050977 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 18050878  T
Q  175 tgtaacaaacaatctcagcaggagcatc 202  Q
    |  | || || |||||||||||||||||    
T  18050877 taaagcacactatctcagcaggagcatc 18050850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 11984273 - 11984343
Alignment:
Q  132 tctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||| |||||||||||| || |||||||||||||||||||| ||| |||||  ||||||||| ||||||||    
T  11984273 tcttcagtacaaacattgctcttgtggcctttctcaccacaattgaaacaagtaatctcagctggagcatc 11984343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 9591653 - 9591715
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||| ||||| ||| |||| |||||||| |||||||||||    
T  9591653 acaaacattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagcatc 9591715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 15627810 - 15627876
Alignment:
Q  137 agtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    ||||||| | ||||| |||||||||||||||||||| ||||| |||||||  |||||||||| ||||    
T  15627810 agtacaagcgttactcttgtggcctttctcaccacagttgtagcaaacaacttcagcaggagtatct 15627876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 16726422 - 16726360
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||| | ||||| ||| |||||||||| || |||||||||||    
T  16726422 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 16726360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 17703436 - 17703374
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||| | ||||| ||| |||||||||| || |||||||||||    
T  17703436 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 17703374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 8710904 - 8710949
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  8710904 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 8710949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 13689340 - 13689385
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  13689340 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 13689385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 15158028 - 15157983
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  15158028 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 15157983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 121; Significance: 4e-62; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 2022 - 1850
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| ||||||| ||||| |||||||| ||||| |||||||||||||||  |||||    
T  2022 tcattgcagttatagcaaacaacgtctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaa 1923  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||    
T  1922 cattactcttgtggcctttctcaccacacttgtagcaaacaatttcagcaggagcatctatcctcttgggcct 1850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 60 - 217
Target Start/End: Complemental strand, 11961 - 11804
Alignment:
Q  60 caaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 159  Q
    ||||| ||||| || ||||| ||||||||||   ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  11961 caaacaatgtcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggc 11862  T
Q  160 ctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  11861 ctttctcgccacacttgtaacaaacgatctcagtaggagcatctctcctcttgggcct 11804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 70684 - 70768
Alignment:
Q  123 ttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcc 207  Q
    |||||||||||||| || || |||||||  |||||||||||| |||||||||||||||||||||  ||| |||||||||||||||    
T  70684 ttcttctcatctttggtgcagacattacccttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggagcatctctcc 70768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 121; Significance: 4e-62; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 39403 - 39231
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||||||||| |  |||||||||||||||| ||||||| ||||||| ||||| |||||||| ||||| |||||||||||||||  |||||    
T  39403 tcattgcagttatagcaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaa 39304  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39303 cattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggagcatctctcctcttgggcct 39231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 201
Target Start/End: Complemental strand, 180903 - 180753
Alignment:
Q  51 cagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattac 150  Q
    |||||| | ||||| || ||||| ||||| |||||||| || |  || |||||||| || || || || |||||||||||||||| ||| ||| ||||||    
T  180903 cagttaaaacaaacaatatctccacgcttgcaatcagccaacacatgacccttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattac 180804  T
Q  151 ttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcat 201  Q
    | |||||||| ||| ||||||| ||||||||||||| |||| |||||||||    
T  180803 tcttgtggcccttcacaccacatttgtaacaaacaacctcaacaggagcat 180753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 14753 - 14815
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||| ||||| ||||||||| ||||||||||||| |||||||||||    
T  14753 acaaacattactcttgtggccattctcgccacacttgaaacaaacaatctccgcaggagcatc 14815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 5244 - 5298
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagca 194  Q
    |||| ||||||| || |||||||||||||||||  |||| |||||||||||||||    
T  5244 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagca 5298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 22027790 - 22027618
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||| ||||||||||||| | |||||||| |||||||||||||||| |||| |||||||| |||||||| ||||| |||||||||||||| |||||||    
T  22027790 tcattgtagttatagcaaacaacgtctcccctcttacaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctcatctttggtacaaa 22027691  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  22027690 cattactcttgtggcctttatcgccacacttgtaacaaactatctcagcaggagcatctctcctattgggcct 22027618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 28984183 - 28984354
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  28984183 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 28984282  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  28984283 attactcttgtggcctttctcaccacacttgtaacaaacaatctcaactggagcatctctcctcttgggcct 28984354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 99 - 217
Target Start/End: Complemental strand, 16268680 - 16268562
Alignment:
Q  99 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggag 198  Q
    |||||||| |||||||| ||||| ||| |||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  16268680 cccttctgaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggag 16268581  T
Q  199 catctctcctcttgggcct 217  Q
    |||||||| |||| |||||    
T  16268580 catctctcttcttaggcct 16268562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 31414039 - 31413870
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    |||||||| |||||||| ||||| || |||||||| ||||||| | ||||||| ||||| ||||||||||| || ||| |||||||| ||  |||| |||    
T  31414039 ttgcagttgtagcaaacaatgtccccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacacttcctctcatctctaccacaagcat 31413940  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    | || || |||||||| |||||||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  31413939 tgctcttatggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcct 31413870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 75 - 217
Target Start/End: Original strand, 22054164 - 22054306
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||| ||||| | ||| |||||||| ||||| || ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  22054164 cgcttgcaatccgctaaaaggtgacccttctgaccacatctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacact 22054263  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |  ||||||| |||||||||| |||||||||||| || |||||    
T  22054264 taaaacaaactatctcagcagaagcatctctcctattcggcct 22054306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 29300936 - 29300764
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||||||||||||| | || ||||| || |||||||| ||||||| | |||||||  |||| ||||||||||| || ||| | |||||| ||  ||||     
T  29300936 tcattgcagttatagtagacaatgtccccacgcttacattcagctagtgtgtgtcctctctgaccacacctaaaacacttcctttcatctctaccacaag 29300837  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||| || ||||||||| | |||||||||||  |||||||||| ||||| ||| |||||| ||||||||||||    
T  29300836 cattgctcttgtggcctctttcaccacacttaaaacaaacaatttcagcgggaacatctcccctcttgggcct 29300764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 22374149 - 22374304
Alignment:
Q  54 ttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttt 153  Q
    ||||||||||| || || || ||||| |||||||||||| ||||||| |||| |||||||||||| || ||||| |||||      ||| |||||||| |    
T  22374149 ttatagcaaacaatatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttttcatcacggtcacatacattactct 22374248  T
Q  154 tgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctc 209  Q
    ||||| |||| |||||||||||| |||| |||||||||| ||||| ||||||||||    
T  22374249 tgtggtctttttcaccacacttgaaacagacaatctcagtaggagaatctctcctc 22374304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 19985487 - 19985623
Alignment:
Q  81 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaac 180  Q
    |||||||||||| ||||||  ||||||||||| || ||  | |||||||||||      ||| |||||||| ||||||| ||| || ||||||||| |||    
T  19985487 caatcagctaatgtgtgtcatttctgtccacatctgaaatacttcttctcatcacggtcacatacattactcttgtggcttttttcgccacacttgaaac 19985586  T
Q  181 aaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||||||||| |||||||||||||||||| |||||    
T  19985587 aaacaatctcagtaggagcatctctcctcttaggcct 19985623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 6606883 - 6606813
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||| |||| ||||||| |||||    
T  6606883 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctctt 6606813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 20391454 - 20391523
Alignment:
Q  142 aaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||||||||| |||| ||||||| |||||    
T  20391454 aaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagaaggaacatctctactctt 20391523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 30310559 - 30310497
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||||| ||||| ||| |||||||||| || |||||||||||    
T  30310559 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatatccgcaggagcatc 30310497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 209
Target Start/End: Original strand, 21928748 - 21928863
Alignment:
Q  94 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagc 193  Q
    ||||||| ||||||||||| || || || ||||||||||||     ||  |||||||| | |||||| || || ||||||||| |||||| ||||||||     
T  21928748 tgtgtcctttctgtccacatctgaaacacttcttctcatctcggtcacttacattactctcgtggcccttttcgccacacttgaaacaaagaatctcagt 21928847  T
Q  194 aggagcatctctcctc 209  Q
    ||||||||||||||||    
T  21928848 aggagcatctctcctc 21928863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 21391276 - 21391214
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||| ||||||| ||||||||||||||||||||     |||||||||||||||||||||||||    
T  21391276 acaagcattactcttgtggcctttctcaccacaagaaaaacaaacaatctcagcaggagcatc 21391214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 21780602 - 21780540
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||| ||||||| ||||||||||||||||||||     |||||||||||||||||||||||||    
T  21780602 acaagcattactcttgtggcctttctcaccacaagaaaaacaaacaatctcagcaggagcatc 21780540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 22043193 - 22043255
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||||||||||| ||| |||||  ||||||||  ||||||||    
T  22043193 acaaacattactcttgtggcctttctcaccacaattgaaacaagtaatctcagttggagcatc 22043255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 32603511 - 32603573
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||| ||||||| ||| |||||||||| || | |||||||||    
T  32603511 acaaacattactcttgtggcctttcccaccacagttgaaacaaacaatttccgaaggagcatc 32603573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 17671433 - 17671382
Alignment:
Q  144 acattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||| ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  17671433 acattgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag 17671382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 21671881 - 21671944
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    |||| ||||||| ||||||||||||||||||||  | || || ||||||||| |||||||||||    
T  21671881 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 21671944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 22421308 - 22421276
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccaca 172  Q
    |||| ||||||||||||||||||||||||||||    
T  22421308 acaagcattacttttgtggcctttctcaccaca 22421276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 2e-57; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 12357822 - 12357650
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| ||||||| ||||| |||||||| ||||| |||||||||||||||  ||| |    
T  12357822 tcattgcagttatagcaaacaacgtctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaga 12357723  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| ||||||||||| || ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  12357722 cattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggagtatctctcctcttgggcct 12357650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 18131642 - 18131470
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||||||||||||||| ||||  || || |||||||||| |||||||  |||||| ||||| |||||||| ||||| |||||||||||||||  |||||    
T  18131642 tcattgcagttatagcacactacatccccacgcttacaattagctaatgcgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaa 18131543  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  18131542 cattactcttgtggcctttctcgccacacttgtagcaatcaatctcaacaggagcatctctcctcttgggcct 18131470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 31941737 - 31941909
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||| ||||| ||||| |  || || ||||| || |||||||   ||||||||||||| |||||||| || || |||||||||||||| |||||||    
T  31941737 tcattgcaattataacaaacaacatcaccacgcttgcagtcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatctttggtacaaa 31941836  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  31941837 cattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatttctcctattgggcct 31941909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 14290797 - 14290655
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||| ||||||||||||  |  ||| |||||||| ||||||||||||||||||||||    
T  14290797 cgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcaatcacacacattactcttgtggcctttctcaccacact 14290698  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    || | |||| |||||||| |||||||||||||||||| |||||    
T  14290697 tgaagcaaataatctcagtaggagcatctctcctcttaggcct 14290655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 48 - 217
Target Start/End: Original strand, 17494484 - 17494652
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    ||||||||||||||||| |||||||| | |||||| ||||||| | ||||||| ||||| |||||||| | ||| |||||||||||| ||  ||||||||    
T  17494484 ttgcagttatagcaaacaatgtctccacacttacagtcagctagtgtgtgtcctttctgaccacacctga-gcacttcttctcatctctatcacaaacat 17494582  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||| ||||||||||| |||||||| ||| | ||||||||||||| | ||||||||||||||||||||||    
T  17494583 tactcttgtggcctttttcaccacatttgaagcaaacaatctcagtatgagcatctctcctcttgggcct 17494652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 31692480 - 31692308
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| |  || || | ||| || |||||||   ||||||||||||  |||||||| || || |||||||||||||| |||||||    
T  31692480 tcattgcagttataacaaacaacatcaccactcttgcagtcagctagagtgtgtcccttctaaccacacctgaaacacttcttctcatctttggtacaaa 31692381  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| |||||| ||||||||    
T  31692380 cattactcttgtggcctttctcaccacacttgtaacaaacgatctcagcagaagcatttctcctattgggcct 31692308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 10408803 - 10408974
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  10408803 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 10408902  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  10408903 attactcttgtggcctttctcaccacatttgtaacaaacaatctcagctggagcatctctcctcttgggcct 10408974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 47126779 - 47126950
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  47126779 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 47126878  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  47126879 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcct 47126950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 46 - 214
Target Start/End: Complemental strand, 16327003 - 16326833
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| ||||| || ||||| || |||||||| ||||||||  ||||||||||||| |||||||| || |||||| |||||||| ||  ||||||    
T  16327003 cattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgtcccttctgaccacacctgaaacatttcctctcatctctaccacaaac 16326904  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaa-tctcagcaggagca-tctctcctcttggg 214  Q
    ||| || ||||||||||| ||||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  16326903 attgctcttgtggcctttttcaccacacttataacaaacaagtctcagcaggagcagtctctcctcttggg 16326833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 11949220 - 11949107
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||| ||||| || ||||| ||||||||||||||||||||||    
T  11949220 tcattgcagttatagcaaacaacatctccccgcttacaatcagctaatatgtgtcctttctgaccacatctgaagcacttcttctcatctttagtacaaa 11949121  T
Q  145 cattacttttgtgg 158  Q
    ||||||| ||||||    
T  11949120 cattactcttgtgg 11949107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 213
Target Start/End: Original strand, 17189257 - 17189376
Alignment:
Q  94 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagc 193  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||||  |||||||||| ||| |    
T  17189257 tgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaac 17189356  T
Q  194 aggagcatctctcctcttgg 213  Q
    ||||||||||||||||||||    
T  17189357 aggagcatctctcctcttgg 17189376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 66 - 217
Target Start/End: Original strand, 28757174 - 28757325
Alignment:
Q  66 atgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 165  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  28757174 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 28757273  T
Q  166 caccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  28757274 caccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcct 28757325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 24190187 - 24190305
Alignment:
Q  94 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagc 193  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||||  |||||||||| ||| |    
T  24190187 tgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaac 24190286  T
Q  194 aggagcatctctcctcttg 212  Q
    |||||||||||||||||||    
T  24190287 aggagcatctctcctcttg 24190305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 16825574 - 16825402
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||| |||| |||||||| ||||| || |||||||||||||||||  ||||||| || |  |||||||| ||||| |||||||||||      |||||    
T  16825574 tcattgaagttgtagcaaacaatgtccccacgcttacaatcagctaaagtgtgtccttttttaccacacctgaagcacttcttctcatcacggtcacaaa 16825475  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| ||||||||||| |||||||||||| |||||||||| |||| ||||||||||||| ||||||||||    
T  16825474 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcatcttgggcct 16825402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 16384637 - 16384495
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| |||||||| || ||||| |||||||| |||||||| ||||| ||||||||||| || |||||||| ||||| |||||| ||||||| |||||||    
T  16384637 cgcttgcaatcagccaacatgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggactttctcgccacact 16384538  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |  ||||||| ||||||||||||||||||||||| || |||||    
T  16384537 taaaacaaactatctcagcaggagcatctctcctattcggcct 16384495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 99 - 217
Target Start/End: Complemental strand, 16831769 - 16831651
Alignment:
Q  99 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggag 198  Q
    |||||||| |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||||||  ||||||| |||||||||||||    
T  16831769 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 16831670  T
Q  199 catctctcctcttgggcct 217  Q
    |||||||||| || |||||    
T  16831669 catctctcctattcggcct 16831651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 11958473 - 11958310
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    |||||||| ||||| || |||||  | |||||||| ||||||| | | ||||| ||||| |||||||| || || ||| |||||||| ||  |||| |||    
T  11958473 ttgcagttgtagcagacaatgtcctcacgcttacattcagctagtgtatgtcctttctgaccacacctgaaacacttcctctcatctctaccacaagcat 11958374  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    | |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  11958373 tgcttttgtggcctttttcaccacacttataacaaacaatttcagcaggagcatctctcctctt 11958310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 35983015 - 35983187
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||| ||||| |||||||| || || || ||||| |||||||| ||| ||||||| ||||||||||| || || || ||||||||||||     ||| |    
T  35983015 tcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatctcggtcacaca 35983114  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||||||||||||| | |||| |||| ||| |||||||||||||||||| |||||    
T  35983115 cattactcttgtggcctttctcaccacacttgaagcaaataatcacagtaggagcatctctcctcttaggcct 35983187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 48 - 213
Target Start/End: Original strand, 12181181 - 12181346
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    ||||| ||||| ||||| ||||| ||  ||||||||||||||| | ||||||| ||| | ||||| || ||||| |||||||||||| ||  ||| || |    
T  12181181 ttgcaattataacaaacaatgtccccaagcttacaatcagctagtgtgtgtcctttccgaccacaactgaagcacttcttctcatctctatcacagactt 12181280  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgg 213  Q
    |||| ||||||||||| |||||||||||| | |||| ||| |||| ||||||||||||||||||||    
T  12181281 tactcttgtggcctttttcaccacacttgaagcaaaaaatgtcagtaggagcatctctcctcttgg 12181346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 13317786 - 13317702
Alignment:
Q  123 ttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcc 207  Q
    |||||||||||||| || |||||||||||||||||||||||  |||||||||||||||||||||  ||| |||||||||||||||    
T  13317786 ttcttctcatctttggtgcaaacattacttttgtggccttttgcaccacacttgtaacaaacaacatcaacaggagcatctctcc 13317702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 2037111 - 2037041
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  2037111 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctctt 2037041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 2040852 - 2040782
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  2040852 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctctt 2040782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 14039676 - 14039746
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  14039676 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctctt 14039746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 15008783 - 15008713
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  15008783 caaacattactcttgtggcctctctcaccacacttgtagcaaacaatctcagcaggaacatctctcctctt 15008713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 202
Target Start/End: Complemental strand, 8744655 - 8744528
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  8744655 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 8744556  T
Q  175 tgtaacaaacaatctcagcaggagcatc 202  Q
    |  | || || |||||||||||||||||    
T  8744555 taaagcacactatctcagcaggagcatc 8744528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 202
Target Start/End: Original strand, 13944888 - 13945015
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  13944888 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 13944987  T
Q  175 tgtaacaaacaatctcagcaggagcatc 202  Q
    |  | || || |||||||||||||||||    
T  13944988 taaagcacactatctcagcaggagcatc 13945015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 15230531 - 15230609
Alignment:
Q  139 tacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||||||||| |||||||| || |||||||||||||| |||||||||||||||||| ||||| | ||||| |||||    
T  15230531 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcct 15230609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 15236399 - 15236477
Alignment:
Q  139 tacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||||||||| |||||||| || |||||||||||||| |||||||||||||||||| ||||| | ||||| |||||    
T  15236399 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcct 15236477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 12857761 - 12857619
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagt-acaaacattacttttgtggcctttctcaccacac 173  Q
    ||||| || ||||||| ||||||||| |||| |||||| |  || || |||||||||||   ||| ||| ||||||||  ||||||| || |||||||||    
T  12857761 cgcttgcactcagctattatgtgtcctttctttccacatcggaaacacttcttctcatcac-agtcacatacattactcatgtggcccttttcaccacac 12857663  T
Q  174 ttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||| |||| |||||||||| ||||||||||||||| || |||||    
T  12857662 ttgaaacagacaatctcagtaggagcatctctccttttaggcct 12857619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 10417265 - 10417199
Alignment:
Q  120 catttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaa 186  Q
    |||||||||||||||| ||| ||| ||||||| |||||||| ||| ||||||| |||||||||||||    
T  10417265 catttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaacaa 10417199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 23079228 - 23079166
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||||||||| ||  ||||||||||| |||||||||||||    
T  23079228 acaaacattgctcttgtggcctttctcaccacaattaaaacaaacaatcacagcaggagcatc 23079166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 23415009 - 23414939
Alignment:
Q  132 tctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||| |||||||||||| |||||||||||||| ||| | ||| |||| |||||||| |||||||||||    
T  23415009 tctttaggacaaacattactcttgtggcctttctcgccatagttgaaacagacaatctccgcaggagcatc 23414939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 11861272 - 11861334
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||||||||| ||| || | |||||||| |||||||||||    
T  11861272 acaaacattgctcttgtggcctttctcaccacaattgaaatagacaatctccgcaggagcatc 11861334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 202
Target Start/End: Original strand, 12501788 - 12501914
Alignment:
Q  76 gcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacactt 175  Q
    |||| |||||||||||| |||| |||||||  |||||||  || ||||||||  | || | || ||||||||| || |||||||||||||| ||||| ||    
T  12501788 gcttgcaatcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcgccacaatt 12501887  T
Q  176 gtaacaaacaatctcagcaggagcatc 202  Q
    | ||||   ||||||||||||| ||||    
T  12501888 gaaacaggtaatctcagcaggaacatc 12501914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 15065990 - 15066052
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||||||||| ||  |||| |||||| |||||||||||||    
T  15065990 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatcgcagcaggagcatc 15066052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 16804158 - 16804096
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||||||||| ||| |||||  ||||||||| ||||||||    
T  16804158 acaaacattgctcttgtggcctttctcaccacaattgaaacaagtaatctcagctggagcatc 16804096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 12843314 - 12843251
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    |||| ||||||| ||||||||||||||||||||  | || || ||||||||| |||||||||||    
T  12843314 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 12843251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 16695083 - 16695145
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| ||| |||||||||| ||||| ||| |||||  ||||||||| ||||||||    
T  16695083 acaaacattactcttgcggcctttctcgccacaattgaaacaagtaatctcagctggagcatc 16695145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 17497610 - 17497672
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||| ||||||| ||||||||||||||||||||  |  |||| |||||||| |||||||||||    
T  17497610 acaagcattactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatc 17497672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 5110610 - 5110565
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  5110610 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 5110565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 10008529 - 10008574
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  10008529 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 10008574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 15345446 - 15345401
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  15345446 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 15345401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 20059255 - 20059210
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  20059255 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 20059210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 10909139 - 10909179
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctc 190  Q
    ||||||||||||||||||||||| ||| |||| ||||||||    
T  10909139 cttttgtggcctttctcaccacaattgaaacacacaatctc 10909179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 15399725 - 15399677
Alignment:
Q  144 acattacttttgtggcctttctcaccacacttgtaacaaacaatctcag 192  Q
    ||||| ||||||||||||||| ||||||| ||| |||| ||||||||||    
T  15399725 acattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 15399677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 15713257 - 15713217
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctc 190  Q
    ||||||||||||||||||||||| ||| |||| ||||||||    
T  15713257 cttttgtggcctttctcaccacaattgaaacacacaatctc 15713217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 24186113 - 24186161
Alignment:
Q  144 acattacttttgtggcctttctcaccacacttgtaacaaacaatctcag 192  Q
    ||||| ||||||||||||||| ||||||| ||| |||| ||||||||||    
T  24186113 acattgcttttgtggcctttcacaccacaattgaaacacacaatctcag 24186161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 9091 - 8919
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||||||||| |  |||||||||||||||| ||||||| ||||||| ||||| |||||||| ||||| ||||||||||| |||  ||| |    
T  9091 tcattgcagttatagcaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatccttatcacaga 8992  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||    
T  8991 cattactcttgtggcttttctcaccacacttgtagcaaacaatcttagcagaagcatctctcctcttgggcct 8919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 3e-50; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 24515626 - 24515454
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| |  ||||||| ||| |||||||||| | ||||||  ||||| |||||||| || || ||||||||||||||||||||||    
T  24515626 tcattgcagttataacaaacaacatctcccctcttccaatcagctagtgtgtgtcttttctgaccacacctgaaacacttcttctcatctttagtacaaa 24515527  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  24515526 cattactcttgtggcctttctcaccacacttataacaaacaatatcaacaggagcatctctcctcttgggcct 24515454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 42 - 217
Target Start/End: Original strand, 18797756 - 18797931
Alignment:
Q  42 tcatcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtac 141  Q
    ||||||||||||||||||||||| | ||| || ||||| ||||||||||   ||||||||||||| |||||||| || ||||||| |||||||||||| |    
T  18797756 tcatcattgcagttatagcaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacatttctgctcatctttagtgc 18797855  T
Q  142 aaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||| ||  |||||||||| ||||||||||||||    
T  18797856 aaacattactcttgtggcctttctcgccacacttataacaaacaatatccacaggagcatccctcctcttgggcct 18797931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 10466060 - 10465888
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||||||||||||||| || ||||| || |||||||| |||||||   ||||||||||||| ||||||||||| |||||| |||||||| ||  ||||     
T  10466060 tcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtcccttctgaccacacctaaaacatttcctctcatctctaccacaag 10465961  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||| || ||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  10465960 cattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatctctcctcttgggcct 10465888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 45 - 214
Target Start/End: Complemental strand, 14377128 - 14376959
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| |  || || |||||||||| ||||||  ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||    
T  14377128 tcattgcagttataacaaacaacatcaccacgcttacaattagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaa 14377029  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttggg 214  Q
    ||||||| ||||||||||||||||| |||||||| |||||||  ||| |||||||||||||||| |||||    
T  14377028 cattactcttgtggcctttctcaccgcacttgtagcaaacaacatcaacaggagcatctctcctattggg 14376959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 48 - 217
Target Start/End: Original strand, 19456095 - 19456264
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    ||||||||||||||||| |||||||| |||||||||||| ||| | ||||||| ||||| |  ||||| ||||| |||||||||||| ||  ||| ||||    
T  19456095 ttgcagttatagcaaacaatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttcttctcatctctatcacagacat 19456194  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||| ||||||||||| |||||||||||| | ||||||||||||| ||||| ||||||||||||||||||    
T  19456195 tactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcct 19456264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 48 - 217
Target Start/End: Original strand, 19466240 - 19466409
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    ||||||||||||||||| |||||||| |||||||||||| ||| | ||||||| ||||| |  ||||| ||||| |||||||||||| ||  ||| ||||    
T  19466240 ttgcagttatagcaaacaatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttcttctcatctctatcacagacat 19466339  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||| ||||||||||| |||||||||||| | ||||||||||||| ||||| ||||||||||||||||||    
T  19466340 tactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcct 19466409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 21567154 - 21567031
Alignment:
Q  94 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagc 193  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||  | ||||| || |||||    
T  21567154 tgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagc 21567055  T
Q  194 aggagcatctctcctcttgggcct 217  Q
    ||||||||||||||||||||||||    
T  21567054 aggagcatctctcctcttgggcct 21567031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 75 - 217
Target Start/End: Original strand, 19438101 - 19438243
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||||||||   ||||||| ||||| |||||||| || || || ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  19438101 cgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttattctcatctttagtacaaacattactcaagtggcctttctcaccacact 19438200  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| ||| ||||||||||||||||||||||||||||||||    
T  19438201 tgtaacgaacgatctcagcaggagcatctctcctcttgggcct 19438243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 66 - 217
Target Start/End: Original strand, 24367490 - 24367641
Alignment:
Q  66 atgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 165  Q
    ||||| |||||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  24367490 atgtccccccgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 24367589  T
Q  166 caccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||||||    
T  24367590 caccacacttgtagcaaacaatctcaacatgagcatctctcctcttgggcct 24367641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 46 - 198
Target Start/End: Complemental strand, 34642797 - 34642645
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| ||||| || || || || || |||||||||||||| | ||| ||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  34642797 cattgcagttgtagcatacaatatcaccacgtttacaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaac 34642698  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggag 198  Q
    ||||||||||||||| ||||| ||||||||  | ||||| ||||| |||||||    
T  34642697 attacttttgtggcccttctcgccacacttaaagcaaactatctccgcaggag 34642645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 16813805 - 16813875
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  16813805 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctctt 16813875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 8720821 - 8720745
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| |||||    
T  8720821 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcatcaggatcatctctcctcttaggcct 8720745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 21474768 - 21474833
Alignment:
Q  144 acattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctc 209  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||    
T  21474768 acattactcttgtggcctttttcaccacacttgaaacaaacaatctcagtaggagcatctctcctc 21474833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 19486410 - 19486340
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||| |||| ||||||| |||||    
T  19486410 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctctt 19486340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 25771021 - 25771085
Alignment:
Q  153 ttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||||||| |||||||||||| |||| |||||||||| |||||||||||||||||| |||||    
T  25771021 ttgtggcctttttcaccacacttgaaacagacaatctcagtaggagcatctctcctcttaggcct 25771085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 207
Target Start/End: Original strand, 15462411 - 15462567
Alignment:
Q  51 cagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattac 150  Q
    |||||||| || || || ||||||||||| || ||||| || |  || || ||||| || || || || ||||||||||||||| | || || |||||||    
T  15462411 cagttataacacacgatatctccccgcttgcactcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctctggtgcagacattac 15462510  T
Q  151 ttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcc 207  Q
    | |||||||||||| |||||||||||||||| ||||  ||| ||||||  |||||||    
T  15462511 tcttgtggcctttcgcaccacacttgtaacacacaacatcaacaggagtctctctcc 15462567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 23081587 - 23081650
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    |||| ||||||| ||||||||||||||||||||  | ||||||||||||||| |||||||||||    
T  23081587 acaagcattactcttgtggcctttctcaccacaagtataacaaacaatctcaacaggagcatct 23081650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 30678141 - 30678078
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    |||||||||||| |||||||  ||||||||||||||||| ||||||| ||||||||||| ||||    
T  30678141 acaaacattactcttgtggctcttctcaccacacttgtagcaaacaacctcagcaggagtatct 30678078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 21764976 - 21765038
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||||||||| ||| |||| |||||||| |||||||||||    
T  21764976 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatc 21765038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 25958856 - 25958799
Alignment:
Q  154 tgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    |||||||||||| ||||||| |||| ||||||||||||| |||||||||||| |||||    
T  25958856 tgtggcctttcttaccacacctgtagcaaacaatctcagtaggagcatctctactctt 25958799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 27559142 - 27559029
Alignment:
Q  84 tcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaa 183  Q
    ||||||||| |||| |||||||  |||||||  || || |||||| | || | || ||||||| |||| |||||||||||||||||||| ||| |||||     
T  27559142 tcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattgaaacaag 27559043  T
Q  184 caatctcagcagga 197  Q
     |||||||||||||    
T  27559042 taatctcagcagga 27559029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 20010699 - 20010551
Alignment:
Q  60 caaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 159  Q
    ||||| || ||||| ||||| || ||||| || || || |||||||| || || || || ||||||||||||||||  || ||| ||||||| |||||||    
T  20010699 caaacgatatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggc 20010600  T
Q  160 ctttctcaccacacttgtaacaa-acaatctcagcaggagcatctctcc 207  Q
    | ||| ||||||| ||||||||| ||||  ||| ||||||||| |||||    
T  20010599 ccttcacaccacatttgtaacaatacaacatcaacaggagcatttctcc 20010551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 5836345 - 5836290
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||| |||| |||||||||| ||||||| ||| |||| |||||||||||||    
T  5836345 acaaacattgctttcgtggcctttcccaccacagttgaaacacacaatctcagcag 5836290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 18405061 - 18404999
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||| ||||||| ||||||||||||||||||||  || |||| |||||||  |||||||||||    
T  18405061 acaagcattactcttgtggcctttctcaccacaagtgaaacagacaatctttgcaggagcatc 18404999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 25756719 - 25756670
Alignment:
Q  153 ttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||||||||||| ||  |||| |||||||| |||||||||||    
T  25756719 ttgtggcctttctcaccacaattaaaacagacaatctccgcaggagcatc 25756670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 25115720 - 25115768
Alignment:
Q  144 acattacttttgtggcctttctcaccacacttgtaacaaacaatctcag 192  Q
    ||||| ||||||||||||||| ||||||| ||| |||| ||||||||||    
T  25115720 acattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 25115768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 75 - 217
Target Start/End: Original strand, 7302 - 7444
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||||||||   ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  7302 cgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacact 7401  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  7402 tgtaacaaacaatctcagcaggagcatctctcctattgggcct 7444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 214
Target Start/End: Complemental strand, 20833039 - 20832870
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| |  ||||||| ||| |||||||||| | ||||||| ||||| |||||||| || || ||||||||||||||||||||||    
T  20833039 tcattgcagttataacaaacaacatctcccctcttgcaatcagctagtgtgtgtcctttctgaccacacctgaaacaattcttctcatctttagtacaaa 20832940  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttggg 214  Q
    ||||||| |||||||||||||| ||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  20832939 cattactcttgtggcctttctcgccacacttgtagcaaacaatatcaacaggagcatctctcctcttggg 20832870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 19857525 - 19857697
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||| ||||||| ||||| ||||||||||||||||||||||||| | ||||||| ||||| |||||||| |||||||||||||||||| ||  ||| |    
T  19857525 tcattgtagttataacaaacaatgtctccccgcttacaatcagctagtgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacaga 19857624  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| ||||||||||| |||||||||||| | ||||||||||| | || ||||||||||||||| |||||    
T  19857625 cattactcttgtggcctttttcaccacacttgaagcaaacaatctcggtagaagcatctctcctcttaggcct 19857697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 46 - 214
Target Start/End: Original strand, 21961279 - 21961447
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| ||||| || || || || |||||||| ||||||||  ||||||||||||| |||||||| ||||| ||| |||||||||||  ||||||    
T  21961279 cattgcagttgtagcagacaatatccccacgcttacattcagctaaactgtgtcccttctgaccacacctgaagcacttcctctcatctttaccacaaac 21961378  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttggg 214  Q
    ||| || ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21961379 attgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttggg 21961447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 20297635 - 20297806
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| ||||| || ||||| || ||||| || |||||||   |||| |||||||  |||||||| ||||| ||| |||||||||||  ||||||    
T  20297635 cattgcagttgtagcagacaatgtccccacgcttgcattcagctaggctgtgacccttctaaccacacctgaagcacttcctctcatctttaccacaaac 20297734  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20297735 attactcttgtggcatttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 20297806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 24096751 - 24096582
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    |||||||| |||||||| ||||| || |||||||| ||||||| | ||||||| ||||| ||||||||||| || ||| |||||||| ||  |||| |||    
T  24096751 ttgcagttgtagcaaacaatgtccccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacacttcctctcatctctaccacaagcat 24096652  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  24096651 tactcttgtggcctttttcaccacacttgaaacaaacaatctcaacaggagcatctctcctcttgggcct 24096582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 52988993 - 52989164
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| ||||| || ||||| || |||||||| ||||||||  |||| |||||||| |||||||| || || ||| |||||||||||  ||||||    
T  52988993 cattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccacacctgaaacacttcctctcatctttaccacaaac 52989092  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||| || ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  52989093 attgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcct 52989164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 217
Target Start/End: Complemental strand, 38909964 - 38909793
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  38909964 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 38909865  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  38909864 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcct 38909793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 48426125 - 48426296
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  48426125 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 48426224  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  48426225 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcct 48426296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 20074847 - 20074682
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| ||||| || || || || ||||| || ||||| ||  |||| |||||||| |||||||| ||||| ||| ||||||||||| |||||||    
T  20074847 cattgcagttgtagcagacaatatccccacgcttgcattcagccaagctgtgacccttctgaccacacctgaagcacttcctctcatctttactacaaac 20074748  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||| || ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  20074747 attgctcttgtggcctttctcaccacacttgtaacacacaatctcagtgggagcatctctcctctt 20074682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 46 - 214
Target Start/End: Complemental strand, 31537135 - 31536967
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||||||  | |||||| ||  ||||||    
T  31537135 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcattttctatcatctctaccacaaac 31537036  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttggg 214  Q
    ||| || ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  31537035 attgctcttgtggcctttctcaccacacttataacaaacaatctcagaaggagcatctctcctcttggg 31536967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 21739145 - 21739003
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    |||||||||||| ||||  ||||||| ||||| |||||||||||||| ||||||||||||  |  |||||||||||| ||||||||||||||||||||||    
T  21739145 cgcttacaatcaactaaggtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacaaacattactcttgtggcctttctcaccacact 21739046  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    || | |||| |||||||| ||||||| |||||||||| |||||    
T  21739045 tgaagcaaataatctcagtaggagcacctctcctcttaggcct 21739003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 21742691 - 21742519
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||| ||||| |||||||| |  || || ||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||     ||| |    
T  21742691 tcattacagttgtagcaaacaacatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctcggtcacata 21742592  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||||||||||||| | |||| |||||||| |||||||||||||||||| |||||    
T  21742591 cattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcct 21742519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 66 - 217
Target Start/End: Original strand, 37680321 - 37680472
Alignment:
Q  66 atgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 165  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  37680321 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 37680420  T
Q  166 caccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  37680421 caccacacttgtagcaaacaatctcaacaggagtatctctcctcttgggcct 37680472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 22015881 - 22015712
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    ||||||||||| ||||| |  || || ||||| |||||||||||  ||||||| ||||| |||||||| ||||| |||||||||||| ||  ||||||||    
T  22015881 ttgcagttataacaaacaacatccccacgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaaacat 22015782  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||| || ||||||||| | |||||||| |  | ||||||||||||| |||| |||||    
T  22015781 tacttttttggcctttttctccacacttgaatcaaacaatatttgtaggagcatctctcttctttggcct 22015712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 18273114 - 18273184
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||||| |||||    
T  18273114 caaacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatctcttctctt 18273184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 20853884 - 20853737
Alignment:
Q  60 caaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 159  Q
    ||||| || ||||| ||||| || ||||| || || || |||||||| || || || || ||||||||||||||||  || ||| ||||||| |||||||    
T  20853884 caaacgatatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggc 20853785  T
Q  160 ctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcc 207  Q
    | ||| ||||||| |||||||||||||  ||| ||||||||| |||||    
T  20853784 ccttcacaccacatttgtaacaaacaacatcaacaggagcatttctcc 20853737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 21228600 - 21228538
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||||| ||||| ||| ||||||||||||| |||||||||||    
T  21228600 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 21228538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 16379406 - 16379463
Alignment:
Q  137 agtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagca 194  Q
    ||||||||||||||||||||||||||||||||||||    || |||||||||||||||    
T  16379406 agtacaaacattacttttgtggcctttctcaccacaagcatagcaaacaatctcagca 16379463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 24784901 - 24784839
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||||||| | ||| |||| |||||||| |||||||||||    
T  24784901 acaaacattgctcttgtggcctttctcaccataattgaaacagacaatctccgcaggagcatc 24784839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 22435777 - 22435715
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||||||||| ||| || | |||||||  |||||||||||    
T  22435777 acaaacattgctcttgtggcctttctcaccacaattgaaatagacaatcttcgcaggagcatc 22435715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 33388072 - 33388018
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||| || ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  33388072 caaacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag 33388018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 21833627 - 21833672
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  21833627 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 21833672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 21842531 - 21842579
Alignment:
Q  144 acattacttttgtggcctttctcaccacacttgtaacaaacaatctcag 192  Q
    ||||| ||||||||||||||| ||||||| ||| |||| ||||||||||    
T  21842531 acattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 21842579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 5279 - 5115
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||||||||| |  |||| ||||||||||||||||||  ||||||||||||| |||||||| ||||| ||||||||||| |||  ||| |    
T  5279 tcattgcagttatagcaaacaacatctctccgcttacaatcagctaaagtgtgtcccttctgaccacacctgaagcacttcttctcatccttatcacaga 5180  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctc 209  Q
    ||||||| ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||    
T  5179 cattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggagcatctctcctc 5115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 5287 - 5459
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| | ||||||||||||||||| ||||||| ||||||| ||||  |||||||| ||||| |||||||||||||||  ||| |    
T  5287 tcattgcagttataacaaacaacgtctccccgcttacaattagctaatgtgtgtcctttctaaccacacctgaagcacttcttctcatctttatcacaga 5386  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||||  ||||||||||||| || |||||||| |||||||||||||||||||||||||||||| |||||||    
T  5387 cattactcctgtggcctttctcgccgcacttgtagcaaacaatctcagcaggagcatctctcctcgtgggcct 5459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 153726 - 153898
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||| ||||| |||||||| ||||| |||||||||||| ||  ||| |    
T  153726 tcattgcagttatagcaaacaatgtctccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaga 153825  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| || |||| ||| |||||||||||| | |||||||||||||  |||||||||||||||||||||||    
T  153826 cattactcttatggcttttttcaccacacttgaagcaaacaatctcagtgggagcatctctcctcttgggcct 153898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 23508 - 23454
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagca 194  Q
    |||| ||||||| || |||||||||||||||||  |||| |||||||||||||||    
T  23508 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagca 23454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 96; Significance: 3e-47; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 50 - 217
Target Start/End: Original strand, 319482 - 319649
Alignment:
Q  50 gcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacatta 149  Q
    ||||||||| ||||| |  |||||||||||||||| ||||||| ||||||| ||||| |||||||| ||||| |||||||||||||||  ||| ||||||    
T  319482 gcagttataacaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacagacatta 319581  T
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    || |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  319582 ctcttgtggcctttctcgccacacttgtagcaaacaatcccagcaggagcatctctcctattgggcct 319649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 213
Target Start/End: Original strand, 325941 - 326109
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| |  |||||||||||||||| ||||||| ||||||| ||||| |||||| | ||||| |||||||||||||||  ||| |    
T  325941 tcattgcagttataacaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacttgaagcacttcttctcatctttatcacaga 326040  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgg 213  Q
    ||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  326041 cattactcttgtggtctttctcgccacacttgtagcaaacaatctcagcaggagcatctctcctattgg 326109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 200451 - 200401
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctca 191  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  200451 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctca 200401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 3e-47; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 7357473 - 7357644
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| ||||| || |||||||| ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| |||||||||||  | ||||    
T  7357473 cattgcagttgtagcagacaatgtctccacgcttgcattcagctaaattgtgacccttctgaccacacctgaagcacttcctctcatctttaccataaac 7357572  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7357573 attgctcttgtggcctttctcaccactcttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 7357644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 51 - 217
Target Start/End: Original strand, 16150847 - 16151013
Alignment:
Q  51 cagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattac 150  Q
    |||||||||||||| |  || || ||||| |||||||||| | ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  16150847 cagttatagcaaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattac 16150946  T
Q  151 ttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    | |||||||||||||| |||||||| || |||||||| ||| |||||||||||||||||||||||||    
T  16150947 tcttgtggcctttctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcct 16151013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 51 - 217
Target Start/End: Original strand, 16154993 - 16155159
Alignment:
Q  51 cagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattac 150  Q
    |||||||||||||| |  || || ||||| |||||||||| | ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  16154993 cagttatagcaaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattac 16155092  T
Q  151 ttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    | |||||||||||||| |||||||| || |||||||| ||| |||||||||||||||||||||||||    
T  16155093 tcttgtggcctttctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcct 16155159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 18259646 - 18259818
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||   ||||||| ||||| |||||||| ||||| |||||||||||| ||  |||||    
T  18259646 tcattgcagttatagcaaacaatgtccccacgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaaa 18259745  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| ||||||||||| |||||||||||  | |||||||| | || |||||||||| |||||||||||||    
T  18259746 cattactcttgtggcctttttcaccacacttaaagcaaacaatattagtaggagcatctgtcctcttgggcct 18259818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 217
Target Start/End: Complemental strand, 3261860 - 3261689
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  3261860 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 3261761  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  3261760 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcct 3261689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 20893236 - 20893408
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||||||||| ||| | || || || || ||||| || ||||||||  ||||||||||||| |||||||| ||||| ||| |||||||| ||  |||||    
T  20893236 tcattgcagttgtagtagacaatatccccacgcttgcattcagctaaattgtgtcccttctgaccacacctgaagcacttcctctcatctctaccacaaa 20893335  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||| || |||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  20893336 cattgctcttgttgcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcct 20893408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 44658903 - 44658761
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| ||||||||||||||||||||||    
T  44658903 cgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacact 44658804  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||| |||||||||||| |||||||||||||||||||||||||    
T  44658803 tgtagcaaacaatctcaacaggagcatctctcctcttgggcct 44658761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 48 - 217
Target Start/End: Original strand, 15266984 - 15267153
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    ||||||||||||||||| ||||||||  |||||||||||||||   ||||||| ||||| |||||||| ||||| |||||||||||| |   ||||||||    
T  15266984 ttgcagttatagcaaacaatgtctccatgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctctgtcacaaacat 15267083  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||| || ||||| |||||| |||||||| | |||||||| |  | ||||||||||||||||||||||||    
T  15267084 tactcttatggcccttctcatcacacttgaagcaaacaatattcgtaggagcatctctcctcttgggcct 15267153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 94 - 214
Target Start/End: Complemental strand, 11204250 - 11204130
Alignment:
Q  94 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagc 193  Q
    |||| |||||||| |||||||| ||||||||  | |||||| ||  ||||||||| || ||||||||||||||||||||||| ||||||||||||||||     
T  11204250 tgtgacccttctgaccacacctgaagcattttctatcatctctaccacaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcaga 11204151  T
Q  194 aggagcatctctcctcttggg 214  Q
    |||||||||||||||||||||    
T  11204150 aggagcatctctcctcttggg 11204130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 217
Target Start/End: Complemental strand, 29450603 - 29450432
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| || || ||| | ||||||     ||||||    
T  29450603 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaaacacttcctatcatctcctccacaaac 29450504  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  29450503 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttaggcct 29450432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 14993434 - 14993262
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||||||||| |||||||| |  || ||  |||| |||||||||||  ||||||| ||||| |||||||| ||||| |||||||  ||      |||||    
T  14993434 tcattgcagttgtagcaaacaacatccccatgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttcttctcacggtcacaaa 14993335  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| ||||||||||| |||||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  14993334 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcct 14993262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 76 - 209
Target Start/End: Original strand, 15073595 - 15073728
Alignment:
Q  76 gcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacactt 175  Q
    |||| |||||||||||| ||||||| |||| |||||||||||| || |||||||||||      ||| |||||||| ||||||||||| |||||||||||    
T  15073595 gcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggcctttttcaccacactt 15073694  T
Q  176 gtaacaaacaatctcagcaggagcatctctcctc 209  Q
    | |||| |||||||||| ||||||||||||||||    
T  15073695 gaaacagacaatctcagtaggagcatctctcctc 15073728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 45 - 207
Target Start/End: Original strand, 27903590 - 27903752
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||| |||||||| ||||| || ||||| ||||| || ||||| || |  || || ||||| ||||| || || || |||||||||||||| || || |    
T  27903590 tcattacagttataacaaacaatatctccacgcttgcattcagccaacacatgacctttctgaccacatctgaaacacttcttctcatctttggtgcaga 27903689  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcc 207  Q
    ||||||| |||||||||||| |||||||||||||||||||||  ||| |||||||||||||||    
T  27903690 cattactcttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggagcatctctcc 27903752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 202
Target Start/End: Complemental strand, 51603829 - 51603702
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  51603829 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 51603730  T
Q  175 tgtaacaaacaatctcagcaggagcatc 202  Q
    |  | || || |||||||||||||||||    
T  51603729 taaagcacactatctcagcaggagcatc 51603702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 202
Target Start/End: Complemental strand, 53750507 - 53750380
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  53750507 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 53750408  T
Q  175 tgtaacaaacaatctcagcaggagcatc 202  Q
    |  | || || |||||||||||||||||    
T  53750407 taaagcacactatctcagcaggagcatc 53750380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 8708978 - 8709040
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  8708978 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatct 8709040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 211
Target Start/End: Original strand, 13879368 - 13879480
Alignment:
Q  99 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggag 198  Q
    ||||||| |||||| |  ||||| |||||||| || | | | || |||||||| |||||||| ||||||||||||||||||||||||||||||| || |     
T  13879368 cccttctttccacatcggaagcacttcttctcctcatcattgcatacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtagaaa 13879467  T
Q  199 catctctcctctt 211  Q
    ||||||| |||||    
T  13879468 catctcttctctt 13879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 18224185 - 18224123
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||  |||||||||||||| ||||| ||| ||||||||||||| |||||||||||    
T  18224185 acaaacattacacttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 18224123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 13513650 - 13513712
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||| ||||| ||| |||| |||||||| |||||||||||    
T  13513650 acaaacattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagcatc 13513712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 8336 - 8399
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    |||| ||||||| ||||||||||||||||||||  | || || ||||||||| |||||||||||    
T  8336 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 8399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 14697401 - 14697464
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    |||| ||||||| || |||||||||||||||||  | || |||||||||||||||| |||||||    
T  14697401 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcagcagtagcatct 14697464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 15743 - 15685
Alignment:
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    ||||||| ||||||||||||||||||||  | || || ||||||||| |||||||||||    
T  15743 cattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 15685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 18604531 - 18604469
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||||| ||||| ||  |||||| |||||| | |||||||||    
T  18604531 acaaacattactcttgtggcctttctcgccacagttaaaacaaataatctccgaaggagcatc 18604469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 14300681 - 14300636
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  14300681 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 14300636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 8851 - 9017
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    |||||||| |||||||| ||||| || ||||| ||||||||||   ||||||| ||||| |||||||| || || |||||||||||||||||||||||||    
T  8851 ttgcagttgtagcaaacaatgtcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacat 8950  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttggg 214  Q
    |||| |||||||| ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||    
T  8951 tactcttgtggccattctcgccacacttataacaaacaatctcatcaggagcatctctcctcttggg 9017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 205
Target Start/End: Complemental strand, 924 - 764
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| || || || ||||| ||||||||||   ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||    
T  924 tcattgcagttataacaaacaatatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaa 825  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctct 205  Q
    ||||||| || ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  824 cattactcttatggcctttcttgccacacttgtaacaaacaatctcagcaggagcatctct 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 34571 - 34743
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| | ||| || |||||||||||| ||||| ||||||| ||||  |||||||| ||||| |||||||||||| ||  ||| |    
T  34571 tcattgcagttataacaaacaacgtccccacgcttacaatcaactaatgtgtgtcctttctaaccacacctgaagcacttcttctcatctctatcacaga 34670  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  34671 cattactcttgtggcctttctcaccacacttgaaacaaacaatgtcagtaggagcatctctcctcttgggcct 34743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 46 - 217
Target Start/End: Complemental strand, 1676 - 1505
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| ||||| |  ||||| || ||||| || ||||||||  ||||||||||||| |||||||| ||||| ||| |||||||||||  ||||||    
T  1676 cattgcagttgtagcagataatgtccccacgcttgcattcagctaaactgtgtcccttctgaccacacctgaagcacttcctctcatctttaccacaaac 1577  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  1576 attactcttgtgtcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcct 1505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 98623 - 98481
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||||||||   ||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  98623 cgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacact 98524  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||||||| |||||||||||||||||||||| |||||||||    
T  98523 tgtaacaaacgatctcagcaggagcatctctccacttgggcct 98481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 176230 - 176385
Alignment:
Q  54 ttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttt 153  Q
    ||||||||||| |  || || ||||| |||||||||||| ||||||| |||| |||||||||||| || |||||||||||      ||| |||||||| |    
T  176230 ttatagcaaacaacatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactct 176329  T
Q  154 tgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctc 209  Q
    |||||||||| |||||||||||| |||| |||||||| | ||||||||||||||||    
T  176330 tgtggcctttttcaccacacttgaaacagacaatctctgtaggagcatctctcctc 176385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 882 - 713
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    ||||||||||| ||||| ||||| || |||||||||||||||| | ||||||||||||| |||||||| ||||| |||||||||||| ||  ||||||||    
T  882 ttgcagttataacaaacaatgtccccacgcttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcatctctatcacaaacat 783  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||| ||||||||||| |||||||||||| | ||| |||| || | ||||||||||||||||||||||||    
T  782 tactcttgtggcctttttcaccacacttgaagcaatcaatgtccgtaggagcatctctcctcttgggcct 713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 23078151 - 23077982
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    |||||||| |||||||| |||||||| |||||||| |||||||   ||||||| ||||| |||||||| || |||||| |||||||| ||  |||| |||    
T  23078151 ttgcagttgtagcaaacaatgtctccacgcttacattcagctagggtgtgtcctttctgaccacacctgaaacatttcctctcatctctaccacaagcat 23078052  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    | |||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  23078051 tgcttttgtggcctttttcaccacacttgaaacatacaatctcagcaggagcatctctcctcttgggcct 23077982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 20345402 - 20345573
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| ||||| || ||||| || ||||| || ||| |||   |||| |||||||| |||||||| ||||| ||| | |||||||||  ||||||    
T  20345402 cattgcagttgtagcagacaatgtccccacgcttgcattcaactagactgtgacccttctgaccacacctgaagcacttcctatcatctttaccacaaac 20345501  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20345502 attactcttgtgggctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 20345573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 22505799 - 22505970
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| ||||| || ||||| || |||||||| ||||||||  | |||||| |||| |||||||| ||||| ||| |||| ||||||  ||||||    
T  22505799 cattgcagttgtagcagacaatgtccccacgcttacattcagctaagctatgtcccatctgaccacacctgaagcacttcctctcgtctttaccacaaac 22505898  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  22505899 attgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcct 22505970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 23563417 - 23563245
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| |||||  ||||||| | |||||| ||||||| | ||||||| ||||| |||||||| ||||| |||||||||||| ||  ||| |    
T  23563417 tcattgcagttataacaaacattgtctccacccttacagtcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaga 23563318  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| ||||||||||| |||||||||||| | |||||||| |||| ||||||||||||||||||||||||    
T  23563317 cattactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaggagcatctctcctcttgggcct 23563245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 25851192 - 25851363
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| ||||| || |||||||| |||||  | |||||||   |||| |||||||| |||||||| ||||| ||| | |||||||||  ||||||    
T  25851192 cattgcagttgtagcagacaatgtctccacgcttgtattcagctagactgtgacccttctgaccacacctgaagcacttcctatcatctttaccacaaac 25851291  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||    
T  25851292 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaagagcatctctcctcttgggcct 25851363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 217
Target Start/End: Complemental strand, 14884239 - 14884068
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || ||||| || ||||| ||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||| ||    
T  14884239 cattgcagttgtaacagacaatgtccccacgcttgcattcagccaaactgtgacccttctgaccacacctgaagcacttcctatcatctctcccacagac 14884140  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14884139 attactcttgtggcctttctcaccacacttgtaacaaacaatctcagctggagcatctctcctcttgggcct 14884068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 202
Target Start/End: Complemental strand, 17266553 - 17266426
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||| ||||  ||||| ||||||||||||||||| ||||| ||||||||||| |  |||||||| ||||| ||||| |||||||| |||||||    
T  17266553 cgcttgcaatcggctagcatgtgacccttctgtccacacctgaagcacttcttctcatcctcggtacaaacgttactcttgtgacctttctcgccacact 17266454  T
Q  175 tgtaacaaacaatctcagcaggagcatc 202  Q
    |  |||| || |||||||||||||||||    
T  17266453 taaaacacactatctcagcaggagcatc 17266426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 16258189 - 16258119
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  16258189 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctctt 16258119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 22591908 - 22591838
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  22591908 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctctt 22591838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 22595463 - 22595393
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  22595463 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctctt 22595393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 23669847 - 23669917
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||| |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  23669847 caaacattactcttgtggcctttctcaccacactggtaggaaacaatctcagcaggagcatctctcctctt 23669917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 21870432 - 21870355
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||||||||| |||||| ||||||||||||||||| | ||||  ||||||| |||||||||||||||||| |||||    
T  21870432 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcct 21870355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 21874712 - 21874635
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||||||||| |||||| ||||||||||||||||| | ||||  ||||||| |||||||||||||||||| |||||    
T  21874712 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcct 21874635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 18782346 - 18782408
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||||| ||||| ||| ||||||||||||| |||||||||||    
T  18782346 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 18782408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 28892176 - 28892050
Alignment:
Q  60 caaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 159  Q
    ||||| |||||||||||||| || ||||| || |  || || ||||| || || || || |||||||||||||||| ||| ||| ||||||| |||||||    
T  28892176 caaacgatgtctccccgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggc 28892077  T
Q  160 ctttctcaccacacttgtaacaaacaa 186  Q
    | ||| ||||||| |||||||||||||    
T  28892076 ccttcacaccacatttgtaacaaacaa 28892050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 20824647 - 20824728
Alignment:
Q  120 catttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcat 201  Q
    |||||||||||||||| ||| ||| ||||||| |||||||| ||| ||||||| |||||||||||||  ||| |||||||||    
T  20824647 catttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaacaacatcaacaggagcat 20824728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 21561176 - 21561108
Alignment:
Q  143 aacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||| |||||||| |||| |||||||||| | |||||||||||||||||| ||||||| |||||    
T  21561176 aacattactcttgtggcccttcttaccacacttgaagcaaacaatctcagcaggaacatctcttctctt 21561108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 21983328 - 21983260
Alignment:
Q  143 aacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||| |||||||| |||||||||||| | || |||||||||||||||||| ||||||| |||||    
T  21983328 aacattactcttgtggcccttctcaccacacctatagcaaacaatctcagcaggaacatctcttctctt 21983260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 186
Target Start/End: Original strand, 20779086 - 20779173
Alignment:
Q  99 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaa 186  Q
    |||||||| || || || || ||||||||||||||||  || ||| ||||||| |||||||| ||| ||||||| |||||||||||||    
T  20779086 cccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttcacaccacatttgtaacaaacaa 20779173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 22465084 - 22465231
Alignment:
Q  60 caaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 159  Q
    ||||| || ||||| ||||| || ||||| || || || |||||||| || || || || ||||||||||||||||   | ||| ||||||| |||||||    
T  22465084 caaacgatatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttggatgcaagcattactcttgtggc 22465183  T
Q  160 ctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcc 207  Q
    | ||| ||||||| |||||||||| ||  ||| ||||||||| |||||    
T  22465184 ccttcacaccacatttgtaacaaataacatcaacaggagcatttctcc 22465231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 43122685 - 43122752
Alignment:
Q  144 acattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    |||||||| ||||||||  |||| ||||||||||| ||||||||||| ||| || |||||||||||||    
T  43122685 acattactcttgtggcccctctcgccacacttgtagcaaacaatctctgcatgaacatctctcctctt 43122752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 23526283 - 23526345
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||| |||| || |||||||||||||||||||| ||  |||| ||||||||||||||||||||    
T  23526283 acaagcattgctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 23526345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 20803830 - 20803891
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||| || |||||||||||||||||| | ||| |||| |||||||| |||||||||||    
T  20803830 caaacatttctcttgtggcctttctcaccataattgaaacagacaatctccgcaggagcatc 20803891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 41774084 - 41774129
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||    
T  41774084 cttttgtggcctttctcaccacaattgaaacacacaatctcagcag 41774129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 26735882 - 26735819
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    |||| ||||||| || ||||||||||||| |||  |||| |||||||||||| |||||||||||    
T  26735882 acaagcattactcttatggcctttctcacaacaagtgtagcaaacaatctcaacaggagcatct 26735819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 21631556 - 21631498
Alignment:
Q  137 agtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||| |||||||  |||||||||||||||||||  |||| ||||||| ||||||||    
T  21631556 agtacaagcattactcgtgtggcctttctcaccacaagtgtagcaaacaacctcagcag 21631498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 23461203 - 23461265
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||||||||| ||| || | ||||| || |||||||||||    
T  23461203 acaaacattgctcttgtggcctttctcaccacaattgaaatagacaatttccgcaggagcatc 23461265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 23474426 - 23474480
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagca 194  Q
    |||| ||||||| || |||||||||||||||||  |||| |||||||||||||||    
T  23474426 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagca 23474480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 14996883 - 14996838
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  14996883 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 14996838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 19773202 - 19773247
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  19773202 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 19773247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 22330031 - 22329986
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  22330031 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 22329986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 27521648 - 27521693
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  27521648 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 27521693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 27682544 - 27682499
Alignment:
Q  150 cttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||    
T  27682544 cttttgtggcctttctcaccacaattgaaacacacaatctctgcag 27682499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 22351155 - 22351203
Alignment:
Q  144 acattacttttgtggcctttctcaccacacttgtaacaaacaatctcag 192  Q
    ||||| ||||||||||||||| ||||||| ||| |||| ||||||||||    
T  22351155 acattgcttttgtggcctttcccaccacagttgaaacacacaatctcag 22351203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 9842 - 9670
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||||||||| |  |||||||||||||||||| |||   ||||||| ||||| |||||||| ||||| ||||||||||| |||  ||| |    
T  9842 tcattgcagttatagcaaacaacatctccccgcttacaatcaactagggtgtgtcctttctgaccacacctgaagcacttcttctcatccttatcacaga 9743  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| || |||||    
T  9742 cattactcttgtggcccttctcaccacacttgtagcaaacaatatcagcaggagcatctctcctgtttggcct 9670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 23920 - 23844
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcc 216  Q
    |||| ||||||| ||||||||||||||||||||  | ||||| ||||||||| || ||| |||| || |||| ||||    
T  23920 acaagcattactcttgtggcctttctcaccacaagtataacagacaatctcaacatgagtatctttcttcttaggcc 23844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 37173 - 37345
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||||||||| || || || | |||||||||||||| | ||||||||||||| |||||||| ||||| |||||||||||||||  |||||    
T  37173 tcattgcagttatagcaaacaatatccccacacttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcatctttatcacaaa 37272  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||| ||||||||| | |||| ||| |||| |||||  |||||||||||||||||    
T  37273 cattactcttgtggcctttctcgccacacttgaagcaaaaaatatcagtaggagtgtctctcctcttgggcct 37345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 22356 - 22528
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||||||||| |  || || ||||| |||||| |||   ||||||| ||||| |||||| | ||||||||||||||||| |||||| |||    
T  22356 tcattgcagttatagcaaacaacatcaccacgcttgcaatcaactagggtgtgtcctttctgaccacacttgaagcatttcttctcatccttagtaaaaa 22455  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  22456 cattactcttgtggcctttctcgccacacttgtaacaaacgatctcaacaggagcatctctcctattgggcct 22528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 46 - 217
Target Start/End: Complemental strand, 872 - 701
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||| ||||||||||| || ||||| || |||||||| ||||||||  |||||||||| || |||||||| ||||| ||| |||| ||||||  ||||||    
T  872 catttcagttatagcagacaatgtccccacgcttacattcagctaaactgtgtcccttttgaccacacctgaagcacttcctctcgtctttaccacaaac 773  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||| || |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||    
T  772 attgctcttgtggcctttctcaccaaacttgtaacaaacaatctcagaaggagcatctctcctcttaggcct 701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 696 - 867
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| ||||| || ||||| || |||||||| ||||||||  |||| |||||||| || ||||| ||||| ||| |||||||||||  ||||||    
T  696 cattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccgcacctgaagcacttcctctcatctttaccacaaac 795  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||| || ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  796 attgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcct 867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 46 - 217
Target Start/End: Complemental strand, 514422 - 514251
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| ||||| || ||||| || | |||||| |||| |||  ||||||||||||| |||||||| ||||| ||| |||| ||||||  ||||||    
T  514422 cattgcagttgtagcagacaatgtccccacacttacattcagttaagctgtgtcccttctgaccacacctgaagcacttcctctcgtctttaccacaaac 514323  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  514322 attgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcct 514251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 4889 - 4747
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||  |||||||    
T  4889 cgcttgcaatcagctaacatgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattactcttgtggcctttctggccacact 4790  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    | ||||| || ||||||||||||||||||||||| || |||||    
T  4789 tataacagactatctcagcaggagcatctctcctatttggcct 4747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 17517 - 17382
Alignment:
Q  82 aatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaaca 181  Q
    |||| |||||| |||| ||||| ||  ||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||| |||||    
T  17517 aatccgctaatgtgtgacccttttgatcacacctaaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttataaca 17418  T
Q  182 aacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||| ||||||||||||||||||||||| || |||||    
T  17417 aactatctcagcaggagcatctctcctattcggcct 17382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 4493 - 4351
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    |||||||||||||||||| ||||||| ||||| |||||||| |||||||||||||||||| ||  |||||||||||| || ||||||||||| |||||||    
T  4493 cgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacaaacattactcttttggcctttctcgccacact 4394  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    || | |||||||| |||| ||||||||||||||||||||||||    
T  4393 tgaagcaaacaatatcagtaggagcatctctcctcttgggcct 4351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 202
Target Start/End: Complemental strand, 17097 - 16979
Alignment:
Q  84 tcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaa 183  Q
    ||||||||| |||| |||||||  |||||||  || ||||||||| | || |  | ||||||| | || |||||||||||||||||||| ||| |||||     
T  17097 tcagctaatgtgtgacccttcttgccacaccagaaacatttcttcacctcctctggacaaacagtgctcttgtggcctttctcaccacaattgaaacaag 16998  T
Q  184 caatctcagcaggagcatc 202  Q
     ||||||||||||| ||||    
T  16997 taatctcagcaggaacatc 16979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 214
Target Start/End: Complemental strand, 8532 - 8363
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| | ||| || ||||| ||||||||||   ||||||||||||| |||||||| || || ||||||||||| ||||||||||    
T  8532 tcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatccttagtacaaa 8433  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttggg 214  Q
    ||||||| |||||||| ||||| |||||||| ||||||||||| ||| || |||||||||||||||||||    
T  8432 cattactcttgtggccattctcgccacacttataacaaacaatatcaacatgagcatctctcctcttggg 8363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 214
Target Start/End: Complemental strand, 18746 - 18577
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| | ||| || ||||| ||||||||||   ||||||||||||| |||||||| || || ||||||||||| ||||||||||    
T  18746 tcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatccttagtacaaa 18647  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttggg 214  Q
    ||||||| |||||||| ||||| |||||||| ||||||||||| ||| || |||||||||||||||||||    
T  18646 cattactcttgtggccattctcgccacacttataacaaacaatatcaacatgagcatctctcctcttggg 18577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 48 - 217
Target Start/End: Original strand, 251856 - 252025
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    |||||||| |||||||| |||||||| |||||||| ||||||| | ||||||| ||||| ||||||||||| |||||| |||||||| ||  |||| |||    
T  251856 ttgcagttttagcaaacaatgtctccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacatttcctctcatctctaccacaagcat 251955  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
      |||||||||||||| |||||||||||| |||| ||||||||| || ||||||||||||||||||||||    
T  251956 agcttttgtggcctttttcaccacacttgaaacacacaatctcaacaagagcatctctcctcttgggcct 252025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 229827 - 229765
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  229827 acaaacattgctcttgtggcctttctcaccacaattgaaacaaacaatctccgcaggagcatc 229765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 1557 - 1385
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||||||||| |||||||| ||||| || | |||||| |||||||   ||||||||||||  ||||||||||| |||||| || ||||| ||  ||||     
T  1557 tcattgcagttgtagcaaacaatgtccccacacttacattcagctagggtgtgtcccttctaaccacacctaaaacatttcctcacatctctaccacaag 1458  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||| || ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1457 cattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggagcatctctcctcttgggcct 1385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 84; Significance: 4e-40; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 64663 - 64500
Alignment:
Q  54 ttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttt 153  Q
    |||||||||||||  || || ||||| |||| ||||| | ||||||| ||||| |||||||| || |||||||||||||| || |||||||||||||| |    
T  64663 ttatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactct 64564  T
Q  154 tgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| || |||||    
T  64563 tgtggcctttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcct 64500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 49241 - 49078
Alignment:
Q  54 ttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttt 153  Q
    |||||||||||||  || || ||||| |||| ||||| | ||||||| ||||| |||||||| || |||||||||||||| || |||||||||||||| |    
T  49241 ttatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactct 49142  T
Q  154 tgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||| || |||||    
T  49141 tgtggcccttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcct 49078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 58275 - 58112
Alignment:
Q  54 ttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttt 153  Q
    |||||||||||||  || || ||||| |||| ||||| | ||||||| ||||| |||||||| || |||||||||||||| || |||||||||||||| |    
T  58275 ttatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactct 58176  T
Q  154 tgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||| || |||||    
T  58175 tgtggcccttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcct 58112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 29858 - 30030
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||||||  |||| ||||| ||||| || | ||||||||||||||   |||||||||| || |||||||| ||||| |||||||||||| ||  |||||    
T  29858 tcattgcaaatataacaaacgatgtccccacacttacaatcagctagagtgtgtcccttttgaccacacctgaagcacttcttctcatctctatcacaaa 29957  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    | ||||| |||||||||||||||||||||||| | ||||| || |||| |||| |||||||||||||||||||    
T  29958 cgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggaacatctctcctcttgggcct 30030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 84; Significance: 4e-40; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 115797 - 115968
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    ||||||| |||||||| ||||| || || ||||| ||||||||||| | ||| ||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  115797 cattgcaattatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaac 115896  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||||||||||||||||| ||||||||  | ||||| || ||||||||||  ||||| | |||||||||    
T  115897 attacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctcttcccttgggcct 115968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 93889 - 93808
Alignment:
Q  120 catttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcat 201  Q
    |||||||||||||||| ||| ||| ||||||| |||||||| ||| ||||||| ||||||||||||| |||| |||||||||    
T  93889 catttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaacaacctcaacaggagcat 93808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 211
Target Start/End: Original strand, 11211 - 11377
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||||||||| ||||| || ||||| || |||||||| ||||||| |  |||||||||||| |||||||| ||||| ||| |||||||| ||  ||||     
T  11211 tcattgcagttgtagcagacaatgtccccacgcttacattcagctagtgcgtgtcccttctgaccacacctgaagcacttcctctcatctctaccacaag 11310  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    |||| || ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  11311 cattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctctt 11377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 939 - 770
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    ||||||||||||||||| ||||| || |||||||||||||||| | ||||||| ||||| |||||| | ||||| |||||||||||| ||  ||| ||||    
T  939 ttgcagttatagcaaacaatgtcaccacgcttacaatcagctagtgtgtgtcctttctgaccacacatgaagcacttcttctcatctctatcacagacat 840  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||| ||||||||||| |||||||||||| | |||||||| ||   ||||||||||||||||||||||||    
T  839 tactcttgtggcctttttcaccacacttgaagcaaacaatatccataggagcatctctcctcttgggcct 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 16871 - 17043
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||| ||||| |||||||| || || || ||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||  |  ||| |    
T  16871 tcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacaca 16970  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||| ||||||||| |||||| |||||||| |||||||||||||||||| |||||    
T  16971 cattactcttgtggcctttctctccacacttgaaacaaataatctcagtaggagcatctctcctcttaggcct 17043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 50339 - 50511
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||||||||| |||||||| || || || |||||||||||||||||  ||||||| ||||| |||||||| || || ||||||||||||     |||||    
T  50339 tcattgcagttgtagcaaacaatatccccacgcttacaatcagctaaggtgtgtcctttctgaccacacctgaaacacttcttctcatctcggtcacaaa 50438  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||| |||| |||||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  50439 cattactcttgtggtctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcct 50511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 53493 - 53321
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||| |||||||| || || | ||| || ||||| |||||| |||  |||||||| || || |||||||| || |||||||||||||| ||||||||||    
T  53493 tcattacagttataacataccacgtcaccacgcttgcaatcaactaggatgtgtcctttttgaccacacctgaatcatttcttctcatccttagtacaaa 53394  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||| ||||||||||||||||| ||| ||||| ||||||||||||| ||||||||    
T  53393 cattactcttgtggcctttctcgccacacttgtaacaaacgatcccagcaagagcatctctcctattgggcct 53321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 201
Target Start/End: Original strand, 54281 - 54437
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| |  || || ||||| |||| |||||   ||||||||||||| |||||||| || || ||||||||||||||||||||||    
T  54281 tcattgcagttataacaaacaacatcaccacgcttgcaataagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatctttagtacaaa 54380  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcat 201  Q
    ||||||| |||||||||||||| ||||||||||||||||| ||||||||| ||||||    
T  54381 cattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaagagcat 54437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 953 - 781
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||||||||||||  |||| ||||| || ||||||||||||||||   ||| ||| ||||| |||||||| ||||| |||||||||||| ||  |||||    
T  953 tcattgcagttataataaacaatgtccccacgcttacaatcagctagagtgtatcctttctgaccacacctgaagcacttcttctcatctctatcacaaa 854  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    | ||||| ||||||||||| |||||||||||| | ||||||||||| | ||||||||||||||||||||||||    
T  853 cgttactcttgtggcctttttcaccacacttgaagcaaacaatctcggtaggagcatctctcctcttgggcct 781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 164471 - 164299
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| |  |  || ||||| |||||| ||||  ||||||| ||||| |||||||| || || ||||||||||| |||| |||||    
T  164471 tcattgcagttataacaaacaacattaccacgcttgcaatcaactaaagtgtgtcctttctgaccacacctgaaacacttcttctcatccttagaacaaa 164372  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  164371 cattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcgtctctcctattgggcct 164299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 30549 - 30487
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||| |||| || |||||||||||||||||||| ||  |||| ||||||||||||||||||||    
T  30549 acaagcattgctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 30487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 43428 - 43352
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcc 216  Q
    |||| ||||||| ||||||||||||||||||||  | || || ||||| |||||| || ||||| || |||||||||    
T  43428 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatttcagcaagaccatctttcttcttgggcc 43352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 41970 - 42141
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  41970 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 42069  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  42070 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcct 42141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 48 - 217
Target Start/End: Original strand, 6042 - 6211
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    ||||||||||| ||||| ||||| || ||||| |||||||||| | ||||||| ||||| ||||| || ||||| |||||||||||| ||  ||| ||||    
T  6042 ttgcagttataacaaacaatgtccccacgcttgcaatcagctagtgtgtgtcctttctgaccacatctgaagcacttcttctcatctctatcacagacat 6141  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||| ||||||||||| |||||||||||| | |||||||| |||| | ||||||||||||||||||||||    
T  6142 tactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaagagcatctctcctcttgggcct 6211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 1369 - 1209
Alignment:
Q  57 tagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgt 156  Q
    |||||||| || || || |||||||| ||||||||  ||||||| ||||| |||||||| ||||| |||||||||||| ||  |||| ||||||| ||||    
T  1369 tagcaaacaatatccccacgcttacattcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgt 1270  T
Q  157 ggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||| ||||||  ||||||| ||||||||||||||||||||||||    
T  1269 ggcctttttcaccacacttgaaacaaattatctcagtaggagcatctctcctcttgggcct 1209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 45 - 213
Target Start/End: Original strand, 5415 - 5583
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||| ||||| |||||||| |  || || |||||||||||||||||  ||||||| ||||| |||||||| ||||| ||||||||||||     |||||    
T  5415 tcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctcggtcacaaa 5514  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgg 213  Q
    ||||||| ||||||||||| |||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  5515 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgg 5583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 94 - 214
Target Start/End: Complemental strand, 566 - 446
Alignment:
Q  94 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagc 193  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||  | ||||| |||||||     
T  566 tgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagt 467  T
Q  194 aggagcatctctcctcttggg 214  Q
    |||||||||||||||||||||    
T  466 aggagcatctctcctcttggg 446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 7990 - 8150
Alignment:
Q  57 tagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgt 156  Q
    |||||||| || || || |||||||| ||||||||  ||||||| ||||| |||||||| ||||| |||||||||||| ||  |||| ||||||| ||||    
T  7990 tagcaaacaatatccccacgcttacattcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgt 8089  T
Q  157 ggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||| ||||||  ||||||| ||||||||||||||||||||||||    
T  8090 ggcctttttcaccacacttgaaacaaattatctcagtaggagcatctctcctcttgggcct 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 4374 - 4202
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||| ||||| |||||||| || || || ||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||  |  ||| |    
T  4374 tcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacaca 4275  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||||||||| | ||||||||||||||||| | |||| |||||||| |||||||||||||||||| |||||    
T  4274 cattacttttgtagtctttctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcct 4202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 354 - 182
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| ||||| || |||||||||||||||| | ||||||  ||||| |||||| | ||||| |||||||||||| ||  ||| |    
T  354 tcattgcagttataacaaacaatgtccccacgcttacaatcagctagtgtgtgtcttttctgaccacacatgaagcacttcttctcatctctatcacaga 255  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||| ||||||||| | |||||||| |||| |||||| ||||| |||||||||||    
T  254 cattactcttgtggcctttctcgccacacttgaagcaaacaatatcagtaggagcctctctgctcttgggcct 182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 15306 - 15478
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| |  || || ||||| ||||||||||   ||||||  ||||| |||||||| ||||| |||||||| || ||||||||||    
T  15306 tcattgcagttataacaaacaacatcaccacgcttgcaatcagctagagtgtgtcatttctgaccacacctgaagcacttcttctcgtccttagtacaaa 15405  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||| |||||||| || || | |||||||||||||||||||||||| ||||||||    
T  15406 cattactcttgtggcctttctcgccacacttatagcagaaaatctcagcaggagcatctctcctattgggcct 15478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 1869 - 1746
Alignment:
Q  94 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagc 193  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||  || |||||    
T  1869 tgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaattatttcagc 1770  T
Q  194 aggagcatctctcctcttgggcct 217  Q
    || |||||||||||||||||||||    
T  1769 agtagcatctctcctcttgggcct 1746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 217
Target Start/End: Original strand, 40322 - 40464
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||| ||||| ||||| |||||||  |||||||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||||||    
T  40322 cgcttgcaatccgctaacatgtgacccttctaaccacacctgaagcacttcttatcatctttggtacaaacattactcttgtggcctttctcgccacact 40421  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    | ||||| || ||||||||||||||||||||||| || |||||    
T  40422 tataacagactatctcagcaggagcatctctcctattcggcct 40464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 63558 - 63417
Alignment:
Q  76 gcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacactt 175  Q
    ||||||||||||||||  ||||||| ||||| |||||||| || || ||||||||||||     |||||||||||| ||||||||||| |||||||||||    
T  63558 gcttacaatcagctaaagtgtgtcctttctgaccacacctgaaacacttcttctcatctcggtcacaaacattactcttgtggcctttatcaccacactt 63459  T
Q  176 gtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    | |||||||||| |||| ||||||||||||||||||||||||    
T  63458 gaaacaaacaatatcagtaggagcatctctcctcttgggcct 63417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 77 - 202
Target Start/End: Complemental strand, 65336 - 65211
Alignment:
Q  77 cttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttg 176  Q
    |||||||| ||| ||  ||||||| ||||| |||||||| ||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  65336 cttacaattagccaacgtgtgtcctttctgaccacacctgaagcactttttctcatctttggtacaaacattactcttgtggcctttctcgccacacttg 65237  T
Q  177 taacaaacaatctcagcaggagcatc 202  Q
    |||||||||| |||||||||||||||    
T  65236 taacaaacaacctcagcaggagcatc 65211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 62812 - 62670
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    |||||||||||||||||  ||||| | ||||| |||||||||||||| ||||||||||| |    ||| |||||||| ||||||||||||||||||||||    
T  62812 cgcttacaatcagctaaagtgtgtactttctgaccacacctaaagcacttcttctcatcatggtcacatacattactcttgtggcctttctcaccacact 62713  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    || |  ||||||| |||| |||||||||||||||||| |||||    
T  62712 tgaattaaacaatatcagtaggagcatctctcctcttaggcct 62670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 23972 - 23821
Alignment:
Q  66 atgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 165  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||| |||||||| |||||||||||||    
T  23972 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacatacattactcttgtggcctttct 23873  T
Q  166 caccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  23872 caccacacttgtatcaaacaatctcaacaggagcatctctcctcttgggcct 23821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 72; Significance: 6e-33; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 45 - 176
Target Start/End: Complemental strand, 12482 - 12351
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| ||||| || |||||||||||| ||||| ||||||| |||||  ||||||||||||| |||||||||||||||  | |||    
T  12482 tcattgcagttataacaaacaatgtccccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaagcacttcttctcatctttacgaaaaa 12383  T
Q  145 cattacttttgtggcctttctcaccacacttg 176  Q
    ||||||| |||||||||||||| |||||||||    
T  12382 cattactcttgtggcctttctcgccacacttg 12351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 45 - 176
Target Start/End: Complemental strand, 20662 - 20531
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    |||||||||||||| ||||| ||||| || |||||||||||| ||||| ||||||| |||||  ||||||||||||| |||||||||||||||  | |||    
T  20662 tcattgcagttataacaaacaatgtccccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaagcacttcttctcatctttacgaaaaa 20563  T
Q  145 cattacttttgtggcctttctcaccacacttg 176  Q
    ||||||| |||||||||||||| |||||||||    
T  20562 cattactcttgtggcctttctcgccacacttg 20531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 575 - 440
Alignment:
Q  82 aatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaaca 181  Q
    |||| |||||| ||||||| ||||| |||||||| ||||| |||||||||||| ||  ||||||| ||||||||||||||||||| ||||||||| ||||    
T  575 aatctgctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctgtatcacaaacactacttttgtggcctttctcgccacacttgaaaca 476  T
Q  182 aacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| ||   ||||||||||||||||||||||||    
T  475 aacaatatctataggagcatctctcctcttgggcct 440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 43480 - 43317
Alignment:
Q  54 ttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttt 153  Q
    ||||||||||| |  || || |||||||||||||||||  ||||||| |||||||||||||||||||| ||||||||||||  |  ||| |||||||| |    
T  43480 ttatagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcgatcacacacattactct 43381  T
Q  154 tgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| || |||| ||||||| |||| |||||||||  |||||||||||||||||| |||||    
T  43380 tgtggcccttttcacgacacttgaaacagacaatctcattaggagcatctctcctcttaggcct 43317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 81 - 208
Target Start/End: Original strand, 263496 - 263623
Alignment:
Q  81 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaac 180  Q
    ||||| ||||| | ||| |||||||| |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||||||  |||    
T  263496 caatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaac 263595  T
Q  181 aaacaatctcagcaggagcatctctcct 208  Q
    |||| |||||||||||||||||||||||    
T  263596 aaactatctcagcaggagcatctctcct 263623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 1302 - 1205
Alignment:
Q  117 aagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttggg 214  Q
    ||||| ||| |||||||| ||  ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1302 aagcacttcctctcatctctaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttggg 1205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 5212 - 5043
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    |||||||| ||||| || |||||||| |||||||| |||||||   ||||||| ||||| |||||||| || |||||| |||||| | ||  |||| |||    
T  5212 ttgcagttgtagcagacaatgtctccacgcttacattcagctagggtgtgtcctttctgaccacacctgaaacatttcctctcatttctaccacaagcat 5113  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |  ||||||||||||| ||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||    
T  5112 tgtttttgtggcctttttcatcactcttttaacaaacaatttcagcaggagcatctctcctcttgggcct 5043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 9827 - 9694
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| ||||| ||||| | ||| |||||||  |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  9827 cgcttgcaatccgctaaaaggtgacccttctaaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacact 9728  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcct 208  Q
    |  ||||||| |||||||||||||||||||||||    
T  9727 taaaacaaactatctcagcaggagcatctctcct 9694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 30393 - 30224
Alignment:
Q  48 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 147  Q
    |||||||| ||||| || ||||| ||   |||||| ||||||| | ||||||| ||||  ||||||||||| |||||| ||| |||| ||  |||| |||    
T  30393 ttgcagttgtagcatacaatgtccccattcttacattcagctagtttgtgtcctttcttaccacacctaaaacatttcctcttatctctaccacaagcat 30294  T
Q  148 tacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    | || ||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  30293 tgctcttgtggcctttttcaccacacttataacaaacaatctcagcaggagcatctttcctcttgggcct 30224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 5704 - 5840
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    |||||||||||||||||  ||||||| ||||| |||||||||||||| ||||||||||||  |  ||| || ||||| ||||||||||||||||||||||    
T  5704 cgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacacacgttactcttgtggcctttctcaccacact 5803  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    || | ||||  ||||||| ||||||||||||||||||    
T  5804 tgaagcaaattatctcagtaggagcatctctcctctt 5840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 11812 - 11643
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || ||||| |  ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||| ||    
T  11812 cattgcagttgtaacagacaatgtccccacgcttgctttcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacatac 11713  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggc 215  Q
    |||||| ||||||||||||| |||||||||||| || ||||||||| | || ||||||||||||||||||    
T  11712 attactcttgtggcctttcttaccacacttgtatcatacaatctcatctggtgcatctctcctcttgggc 11643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 46 - 214
Target Start/End: Complemental strand, 67177 - 67009
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| ||||| || ||||| ||  ||||||| |||||||   |||||||||| || |||||||| || |||||| |||||| | ||  ||||||    
T  67177 cattgcagttgtagcagacaatgtccccaagcttacattcagctaggttgtgtcccttttgaccacacctgaaacatttcctctcatgtctaccacaaac 67078  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttggg 214  Q
    ||| || ||||||||||| ||||||||||| |||||||||||||| | |||||||||||||||||||||    
T  67077 attgctcttgtggcctttttcaccacacttataacaaacaatctcggaaggagcatctctcctcttggg 67009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 6318 - 6155
Alignment:
Q  54 ttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttt 153  Q
    |||||||| || || || || ||||||||||||||||  | ||| |||||||| |||||||| ||||| ||||||||||| || |||||||| ||||| |    
T  6318 ttatagcatacaatatcgccacgcttacaatcagctagcacgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactct 6219  T
Q  154 tgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||||||||| ||||||||  ||||||| |||||  |||||||||||||||| || |||||    
T  6218 tgtggcctttctcgccacacttaaaacaaactatctcgacaggagcatctctcctattcggcct 6155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 208
Target Start/End: Original strand, 203651 - 203778
Alignment:
Q  81 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaac 180  Q
    ||||| ||||| | ||| |||||||| |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||||||  |||    
T  203651 caatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaac 203750  T
Q  181 aaacaatctcagcaggagcatctctcct 208  Q
    |||| |||||| ||||||||||||||||    
T  203751 aaactatctcaccaggagcatctctcct 203778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 424637 - 424697
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagca 200  Q
    ||||||||| ||||||||||||||| ||||||| ||| | || |||||||||| |||||||    
T  424637 acaaacattgcttttgtggcctttcacaccacagttgaagcacacaatctcagtaggagca 424697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 75 - 217
Target Start/End: Original strand, 1984 - 2126
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    |||||||||||||||||  | ||||| |||||||||||||||||||| ||||||||||||     ||| |||||||| ||||||||||||||||||||||    
T  1984 cgcttacaatcagctaaagtatgtcctttctgtccacacctaaagcacttcttctcatctcggtcacacacattactcttgtggcctttctcaccacact 2083  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    || | |||| ||| |||| ||||||||||| |||||| |||||    
T  2084 tgaagcaaataatttcagtaggagcatctcacctcttaggcct 2126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 801 - 910
Alignment:
Q  108 ccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcc 207  Q
    |||||||| ||| | |||||||||||||||  ||| |||||||| |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||    
T  801 ccacacctgaagtacttcttctcatctttatcacagacattactcttgtggcctttctagccacacttgtagcaaacaatctcagcaggagcatctctcc 900  T
Q  208 tcttgggcct 217  Q
    |||| |||||    
T  901 tcttaggcct 910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 70342 - 70514
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 144  Q
    ||||| ||||| |||||||| || || || ||||| |||||||| ||| ||||||| ||||||||||| || || || ||||||||||||     ||| |    
T  70342 tcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatctcggtcacaca 70441  T
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||| |||||||||||||||||||||||  | |||| |||||||| |||||||||||||||||| |||||    
T  70442 cattactcttgtggcctttctcaccacacttaaagcaaataatctcagtaggagcatctctcctcttaggcct 70514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 75 - 217
Target Start/End: Original strand, 42962 - 43104
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    |||||| |||| |||||  ||||||| ||||| | |||||||||||| ||||||||||||     |||||||||||| |||||||||||||||| |||||    
T  42962 cgcttaaaatccgctaaagtgtgtcctttctgactacacctaaagcacttcttctcatctcggtcacaaacattactcttgtggcctttctcacaacact 43061  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    || ||||||  ||||||| |||||||||||||||||| |||||    
T  43062 tgaaacaaattatctcagtaggagcatctctcctcttaggcct 43104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 202
Target Start/End: Complemental strand, 50385 - 50258
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    |||||||| ||||||| | ||||||||||||  ||||| | ||| ||| ||||  | |||   | |||| |||| ||||||||||||||||||||||| |    
T  50385 cgcttacactcagctagtgtgtgtcccttcttcccacagcgaaaacatctctttccctctcccggacaagcattgcttttgtggcctttctcaccacaat 50286  T
Q  175 tgtaacaaacaatctcagcaggagcatc 202  Q
    |  | || ||||||||||||||| ||||    
T  50285 taaagcagacaatctcagcaggaacatc 50258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 76 - 209
Target Start/End: Original strand, 51916 - 52049
Alignment:
Q  76 gcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacactt 175  Q
    |||| |||| ||||||  ||||||| ||||  |||||||||||||| ||||||||||||  |  ||| |||||||| |||||||||||||||||||||||    
T  51916 gcttgcaataagctaaagtgtgtcctttcttaccacacctaaagcacttcttctcatctcgatcacatacattactcttgtggcctttctcaccacactt 52015  T
Q  176 gtaacaaacaatctcagcaggagcatctctcctc 209  Q
    | |||| | |||||||| ||||||||||||||||    
T  52016 gaaacagataatctcagtaggagcatctctcctc 52049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 5877 - 5800
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  5877 acaaacattactcttgtggcctttttcaccacacttgtaataaacaatatcagtaggagcatctctcctcttgggcct 5800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 202
Target Start/End: Original strand, 30169 - 30325
Alignment:
Q  46 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 145  Q
    |||||||||| || || || ||||| || |||||||| |||||||   ||||||  ||||| |||||||| || || ||| |||||||| ||  ||||||    
T  30169 cattgcagttgtaacagacaatgtccccacgcttacattcagctaggttgtgtcttttctgaccacacctgaatcacttcctctcatctctaccacaaac 30268  T
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
     || |||||||||||||||||||||||||||||||||||||||| || | |||||||    
T  30269 gttgcttttgtggcctttctcaccacacttgtaacaaacaatcttagaaagagcatc 30325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 12052 - 12176
Alignment:
Q  66 atgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 165  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  12052 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 12151  T
Q  166 caccacacttgtaacaaacaatctc 190  Q
    ||||||||||||| |||||||||||    
T  12152 caccacacttgtagcaaacaatctc 12176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 209
Target Start/End: Original strand, 5866 - 6000
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| |||||||||||| ||||||| ||||||||||| || || || ||||||| ||||  |  ||| |||||||| ||||||||||||||||||||||    
T  5866 cgcttgcaatcagctaatgtgtgtcctttctgtccacatctgaaacacttcttcttatctcaatcacacacattactcttgtggcctttctcaccacact 5965  T
Q  175 tgtaacaaacaatctcagcaggagcatctctcctc 209  Q
    || || | ||| |||||  ||| ||||||||||||    
T  5966 tgaaatagacagtctcattaggggcatctctcctc 6000  T

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Target: scaffold0031 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 217
Target Start/End: Original strand, 115936 - 116030
Alignment:
Q  123 ttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||||||||| ||  |||||||||||| ||||||||||| ||||||||| || |||||||||| |||| ||||||||| |||||||| |||||    
T  115936 ttcttctcatctctatcacaaacattactcttgtggcctttttcaccacacatgaaacaaacaatatcagtaggagcatccctcctcttaggcct 116030  T

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Target: scaffold0188 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 33334 - 33270
Alignment:
Q  153 ttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    ||||||||||| |||||||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  33334 ttgtggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcct 33270  T

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Target: scaffold0180 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 31012 - 30917
Alignment:
Q  116 aaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    |||||| |||||||||||   | | ||| ||||||| |||||||| ||||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  31012 aaagcacttcttctcatcaccattgcaagcattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctcttctctt 30917  T

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Target: scaffold0609 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 1269 - 1339
Alignment:
Q  141 caaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||| |||| || |||||    
T  1269 caaacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatcccttctctt 1339  T

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Target: scaffold0609; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 7908 - 7957
Alignment:
Q  162 ttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    ||||||||||||||||||||||||||||||| |||| |||| || |||||    
T  7908 ttctcaccacacttgtaacaaacaatctcagtaggaacatcccttctctt 7957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 17489 - 17551
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||||||||||| ||| |||| |||||||| |||||||||||    
T  17489 acaaacattactcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatc 17551  T

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Target: scaffold0161 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 36156 - 36228
Alignment:
Q  139 tacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    |||| |||||||| ||||||||||||||||||||| |||| |||||||||| || ||| |||||||| |||||    
T  36156 tacagacattactcttgtggcctttctcaccacacctgtagcaaacaatcttagtaggggcatctcttctctt 36228  T

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Target: scaffold0100 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 16584 - 16521
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    |||| ||||||| |||||||| ||||||||||||||||| ||||||| ||||||||||| ||||    
T  16584 acaagcattactcttgtggcccttctcaccacacttgtagcaaacaacctcagcaggagtatct 16521  T

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Target: scaffold1220 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 202
Target Start/End: Original strand, 1 - 127
Alignment:
Q  76 gcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacactt 175  Q
    |||| |||||||||||  | || |||||||  |||||||  || ||||||||| | || || | ||||||||| |||||||||||||||||||||||  |    
T  1 gcttgcaatcagctaaagtatgacccttcttgccacaccggaaacatttcttcacctcctttggacaaacattgcttttgtggcctttctcaccacaaat 100  T
Q  176 gtaacaaacaatctcagcaggagcatc 202  Q
    | |||| |||||||| ||| |||||||    
T  101 gaaacagacaatctccgcaagagcatc 127  T

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Target: scaffold0289 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 117 - 179
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||||||||| ||| |||| |||||||| |||||||||||    
T  117 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctctgcaggagcatc 179  T

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Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 171447 - 171509
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||||||||||| |||||||||  ||||||| | ||||||||    
T  171447 acaaacattactcttgtggcctttctcaccacaattgtaacaagtaatctcaactggagcatc 171509  T

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Target: scaffold1914 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 1246 - 1145
Alignment:
Q  99 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggag 198  Q
    |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| ||||||||  | || || |||||||||| ||    
T  1246 cccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcatactatctcagcagaag 1147  T
Q  199 ca 200  Q
    ||    
T  1146 ca 1145  T

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Target: scaffold0309 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 12961 - 13046
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctc 130  Q
    ||||| ||||| |||||||| |  || || |||||||||||||||||  ||||||| ||||| |||||||||||||| ||||||||    
T  12961 tcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctc 13046  T

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Target: scaffold2059 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 744 - 668
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcc 216  Q
    |||||||||||| |||||| ||||||||||||| ||| |||||  ||||||||| |||||||| ||| |||| ||||    
T  744 acaaacattactcttgtggtctttctcaccacaattgaaacaagtaatctcagctggagcatccctcttcttaggcc 668  T

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Target: scaffold0509 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 12162 - 12214
Alignment:
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcagga 197  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||    
T  12162 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtagga 12214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 3215 - 3271
Alignment:
Q  161 tttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcct 217  Q
    |||||| ||||||||| | |||| |||||||| ||||||||||||||||||||||||    
T  3215 tttctccccacacttgaagcaaataatctcagtaggagcatctctcctcttgggcct 3271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 1311 - 1370
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagc 199  Q
    |||| ||||||| ||||||||||||||||||||  | ||||||||||||||| |||||||    
T  1311 acaagcattactcttgtggcctttctcaccacaagtataacaaacaatctcaacaggagc 1370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 445 - 504
Alignment:
Q  142 aaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcat 201  Q
    ||||||| || |||||||||||||||||||| ||  |||| |||||||||||||||||||    
T  445 aaacattgctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcat 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 207
Target Start/End: Original strand, 1589 - 1676
Alignment:
Q  120 catttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcc 207  Q
    ||||||||||||||||  || ||| ||||||| |||||||| ||  ||||||| |||||||||||||  ||| ||||||||| |||||    
T  1589 catttcttctcatcttgggtgcaagcattactcttgtggcccttaacaccacatttgtaacaaacaacatcaacaggagcatttctcc 1676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 202
Target Start/End: Complemental strand, 10197 - 10071
Alignment:
Q  76 gcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctt-tagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||||||||||||||| | || |||||||  |||||||  || ||||||||  | || | ||| ||||||||| || |||||||||||||||||||| |    
T  10197 gcttacaatcagctaatgtatgacccttcttgccacaccggaaacatttctttacctcctctag-acaaacattgctcttgtggcctttctcaccacaat 10099  T
Q  175 tgtaacaaacaatctcagcaggagcatc 202  Q
    || |||| |||||||| | |||||||||    
T  10098 tgaaacagacaatctccgtaggagcatc 10071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 3863 - 3796
Alignment:
Q  144 acattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    |||||||| ||||||||  |||| ||||||||||| |||||||||||| ||| | |||||||||||||    
T  3863 acattactcttgtggcccctctcgccacacttgtagcaaacaatctcaacagaaacatctctcctctt 3796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 7754 - 7696
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggag 198  Q
    |||||||||||| |||||||||||| | ||||| ||| |||||||||| || |||||||    
T  7754 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggag 7696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 202
Target Start/End: Original strand, 36762 - 36889
Alignment:
Q  75 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 174  Q
    ||||| |||||||||||  | || |||||||  |||||||  || ||||||||| | || |  | ||||||||| || |||||||||||||||||||| |    
T  36762 cgcttgcaatcagctaacgtatgacccttcttgccacaccggaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcaccacaat 36861  T
Q  175 tgtaacaaacaatctcagcaggagcatc 202  Q
    || |||| || ||||| |||||||||||    
T  36862 tgaaacagacgatctccgcaggagcatc 36889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 18174 - 18237
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    |||| ||||||| || |||||||||||||||||  |||| |||||||||||||||| |||||||    
T  18174 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagcagtagcatct 18237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 110882 - 110819
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    |||| ||||||| ||||||||||||||||||||  | || || ||||||||| |||||||||||    
T  110882 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 110819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 455 - 393
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||| ||||| ||| ||||||||||||| | |||||||||    
T  455 acaaacattgctcttgtggcctttctcgccacaattgaaacaaacaatctccgtaggagcatc 393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 208 - 270
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||| | ||||| ||| |||||||||| || |||||||||||    
T  208 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 14007 - 13945
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||||||||| ||  |||| |||||||| |||||||||||    
T  14007 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgcaggagcatc 13945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 5327 - 5389
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| || ||||| ||||| ||||| ||| ||||||||||||| |||||||||||    
T  5327 acaaacattactcttatggcccttctcgccacagttgaaacaaacaatctccgcaggagcatc 5389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 369 - 431
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||| |||| || |||||||||||||||||||| ||  |||||||||||||||||||| ||||    
T  369 acaagcattgctcttgtggcctttctcaccacaattaaaacaaacaatctcagcaggaacatc 431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 29839 - 29925
Alignment:
Q  123 ttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctc 209  Q
    ||||||||||| |   ||||||||||||| |||||||| || |||||||||||| || | || ||||||  ||||||||||||||||    
T  29839 ttcttctcatcatggttacaaacattactcttgtggcccttttcaccacacttgaaatagactatctcaataggagcatctctcctc 29925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 13099 - 13037
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||| | ||||| ||| |||||||||| || |||||||||||    
T  13099 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 13037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 41484 - 41536
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcag 192  Q
    ||||||||| ||||||||||||||| ||||||| ||| |||| ||||||||||    
T  41484 acaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 41536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 21946 - 21995
Alignment:
Q  153 ttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||||||||||| ||  |||| ||||||||||||||||||||    
T  21946 ttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 21995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 37370 - 37419
Alignment:
Q  153 ttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||||||||||| ||  |||| ||||||||||||||||||||    
T  37370 ttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 37419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 104561 - 104618
Alignment:
Q  146 attacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    |||||| ||||||||||||||||||||  | || |||||||||||| |||||||||||    
T  104561 attactcttgtggcctttctcaccacaagtatagcaaacaatctcaacaggagcatct 104618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 139585 - 139509
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcc 216  Q
    |||||||||||| |||||||||||||||||||| ||| | |||  ||||||||| |||| ||| ||| |||| ||||    
T  139585 acaaacattactcttgtggcctttctcaccacaattgaagcaagtaatctcagctggagtatccctcttcttaggcc 139509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 179 - 250
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctctt 211  Q
    |||||||||||| |||||||||||||||||||| ||| | |||  ||||||| | |||||||| ||| ||||    
T  179 acaaacattactcttgtggcctttctcaccacaattgaagcaagtaatctcaactggagcatccctcttctt 250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 7202 - 7265
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    |||| ||||||| || |||||||||||||||||  | || |||||||||||| |||||||||||    
T  7202 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatct 7265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 14332 - 14395
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    |||| ||||||| || |||||||||||||||||  | || |||||||||||| |||||||||||    
T  14332 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatct 14395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 48059 - 48122
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    |||| ||||||| ||||||||||||||||||||  | || || ||||||||| |||||||||||    
T  48059 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 48122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 55441 - 55383
Alignment:
Q  145 cattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatct 203  Q
    ||||||| ||||||||||||||||||||  | || || ||||||||| |||||||||||    
T  55441 cattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 55383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 353 - 291
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||| ||||||| ||||||||||||||||||||  |  |||| |||||||| |||||||||||    
T  353 acaagcattactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatc 291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 9418 - 9356
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||| ||||||| ||||||||||||||||||||  |  |||| |||||||| |||||||||||    
T  9418 acaagcattactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatc 9356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 15739 - 15793
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagca 194  Q
    |||| ||||||| || |||||||||||||||||  |||| |||||||||||||||    
T  15739 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagca 15793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 202
Target Start/End: Complemental strand, 28959 - 28841
Alignment:
Q  84 tcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaacaaa 183  Q
    ||||||||| |||| |||||||  |||||||  || ||||||||  | || |||| ||||||||| || |||||||||||||| ||||| ||| ||||      
T  28959 tcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctccttaggacaaacattgctcttgtggcctttctcgccacaattgaaacagg 28860  T
Q  184 caatctcagcaggagcatc 202  Q
     ||||| ||||||| ||||    
T  28859 taatcttagcaggaacatc 28841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 11331 - 11269
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||||||||| ||  |||| |||||||| | |||||||||    
T  11331 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgtaggagcatc 11269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 15016 - 14954
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    ||||||||| || |||||||||||||||||||| ||  |||| |||||||| | |||||||||    
T  15016 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgtaggagcatc 14954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 10214 - 10152
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||| | ||| | ||| |||||||||| || |||||||||||    
T  10214 acaaacattactcttgtggcctttcccgccatagttgaaacaaacaatatccgcaggagcatc 10152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 12869 - 12807
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||||||||||| |||||||||||| | ||| | ||| |||||||||| || |||||||||||    
T  12869 acaaacattactcttgtggcctttcccgccatagttgaaacaaacaatatccgcaggagcatc 12807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 32208 - 32270
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatc 202  Q
    |||| |||| || |||||||||||||| ||||| ||  |||| ||||||||||||||||||||    
T  32208 acaagcattgctcttgtggcctttctcgccacaattaaaacagacaatctcagcaggagcatc 32270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 26678 - 26736
Alignment:
Q  137 agtacaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcag 195  Q
    ||||||| ||||||| ||||||||||||||||||||  | || ||||||| ||||||||    
T  26678 agtacaagcattactcttgtggcctttctcaccacaagtatagcaaacaacctcagcag 26736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 216395 - 216341
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcagca 194  Q
    |||| ||||||| || |||||||||||||||||  |||| |||||||||||||||    
T  216395 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagca 216341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 1243 - 1178
Alignment:
Q  144 acattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctc 209  Q
    |||||||  ||||||||||| |||||||| ||  |||| ||||||| || ||||||||||||||||    
T  1243 acattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctc 1178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 2195 - 2228
Alignment:
Q  175 tgtaacaaacaatctcagcaggagcatctctcct 208  Q
    |||||||||| |||||||||||||||||||||||    
T  2195 tgtaacaaactatctcagcaggagcatctctcct 2228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 202
Target Start/End: Original strand, 3134 - 3255
Alignment:
Q  81 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtaac 180  Q
    |||||||||||| |||| |||||||  |||||||  || || |||| | | || | || |||| || |||| |||||||||||||||||||| ||| ||     
T  3134 caatcagctaatgtgtgacccttcttgccacaccggaaacacttctccacctcctcaggacaagcagtactcttgtggcctttctcaccacaattgaaag 3233  T
Q  181 aaacaatctcagcaggagcatc 202  Q
    ||  ||||||||||||| ||||    
T  3234 aagtaatctcagcaggaacatc 3255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 134
Target Start/End: Original strand, 12194 - 12283
Alignment:
Q  45 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatct 134  Q
    ||||| ||||| |||||||| || || || | ||| |||||||| ||| ||||||| ||||||||||| || || || ||||||||||||    
T  12194 tcattacagttgtagcaaacaatatccccacacttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatct 12283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 28256 - 28191
Alignment:
Q  144 acattacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctc 209  Q
    |||||||  ||||||||||| |||||||| ||  |||| ||||||| || ||||||||||||||||    
T  28256 acattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctc 28191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 10701 - 10749
Alignment:
Q  144 acattacttttgtggcctttctcaccacacttgtaacaaacaatctcag 192  Q
    ||||| ||||||||||||||| ||||||| ||| |||| ||||||||||    
T  10701 acattgcttttgtggcctttcccaccacaattgaaacacacaatctcag 10749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 3871 - 3903
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccaca 172  Q
    |||| ||||||||||||||||||||||||||||    
T  3871 acaagcattacttttgtggcctttctcaccaca 3903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 17952 - 17920
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccaca 172  Q
    |||||||||||| ||||||||||||||||||||    
T  17952 acaaacattactcttgtggcctttctcaccaca 17920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 13449 - 13397
Alignment:
Q  140 acaaacattacttttgtggcctttctcaccacacttgtaacaaacaatctcag 192  Q
    |||| ||||||| || |||||||||||||||||  |||| |||||||||||||    
T  13449 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcag 13397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 25808 - 25876
Alignment:
Q  147 ttacttttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggc 215  Q
    ||||| ||||| |||||||||||||| ||||||||||| || ||| ||||||  |||  ||||||||||    
T  25808 ttactcttgtgacctttctcaccacatttgtaacaaactatttcaacaggagtctcttccctcttgggc 25876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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