View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0947_low_40 (Length: 351)

Name: NF0947_low_40
Description: NF0947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0947_low_40
NF0947_low_40
[»] scaffold0007 (1 HSPs)
scaffold0007 (214-351)||(183534-183671)
[»] chr5 (48 HSPs)
chr5 (215-351)||(6050659-6050795)
chr5 (215-347)||(6999588-6999720)
chr5 (69-135)||(38597972-38598038)
chr5 (69-145)||(34945558-34945634)
chr5 (69-131)||(8096345-8096407)
chr5 (69-135)||(13007404-13007470)
chr5 (69-135)||(9113572-9113638)
chr5 (70-136)||(14211401-14211467)
chr5 (69-131)||(25980336-25980398)
chr5 (70-135)||(2979154-2979219)
chr5 (232-337)||(25591726-25591831)
chr5 (69-135)||(24229631-24229697)
chr5 (70-135)||(28540754-28540819)
chr5 (217-290)||(30508610-30508683)
chr5 (217-290)||(30548953-30549026)
chr5 (83-136)||(31391614-31391667)
chr5 (217-348)||(27164682-27164813)
chr5 (72-131)||(43148917-43148976)
chr5 (69-131)||(6011985-6012047)
chr5 (69-131)||(11976782-11976844)
chr5 (69-131)||(13422112-13422174)
chr5 (73-135)||(26825605-26825667)
chr5 (217-278)||(25856026-25856087)
chr5 (70-133)||(10722938-10723001)
chr5 (90-145)||(11867814-11867869)
chr5 (72-131)||(34881907-34881966)
chr5 (69-131)||(10332394-10332456)
chr5 (69-131)||(38007536-38007598)
chr5 (73-134)||(8088063-8088124)
chr5 (217-278)||(23239873-23239934)
chr5 (69-145)||(14082243-14082319)
chr5 (72-131)||(3271232-3271291)
chr5 (72-131)||(4954182-4954241)
chr5 (72-131)||(7241974-7242033)
chr5 (72-131)||(7247149-7247208)
chr5 (100-135)||(15571662-15571697)
chr5 (72-131)||(16981482-16981541)
chr5 (233-284)||(36257261-36257312)
chr5 (72-131)||(41184270-41184329)
chr5 (74-128)||(8772013-8772067)
chr5 (72-138)||(27266689-27266755)
chr5 (77-131)||(28235777-28235831)
chr5 (74-144)||(37985965-37986035)
chr5 (70-135)||(19103315-19103380)
chr5 (227-287)||(10485550-10485610)
chr5 (75-127)||(26877962-26878014)
chr5 (100-144)||(41630668-41630712)
chr5 (71-131)||(42781345-42781405)
[»] chr6 (61 HSPs)
chr6 (214-351)||(17077651-17077788)
chr6 (217-351)||(11059449-11059583)
chr6 (73-145)||(9341502-9341574)
chr6 (69-145)||(12170635-12170711)
chr6 (69-145)||(20226018-20226094)
chr6 (69-145)||(22120002-22120078)
chr6 (69-135)||(23128795-23128861)
chr6 (69-143)||(28981346-28981420)
chr6 (69-134)||(3913421-3913486)
chr6 (70-130)||(30776845-30776905)
chr6 (70-133)||(7515050-7515113)
chr6 (69-136)||(29255293-29255360)
chr6 (69-132)||(32327067-32327130)
chr6 (73-135)||(67852-67914)
chr6 (69-135)||(21426533-21426599)
chr6 (220-294)||(26206808-26206882)
chr6 (69-135)||(30493709-30493775)
chr6 (69-135)||(30608362-30608428)
chr6 (69-134)||(606382-606447)
chr6 (217-278)||(17576304-17576365)
chr6 (220-347)||(15675255-15675382)
chr6 (73-135)||(679285-679347)
chr6 (69-135)||(29319724-29319790)
chr6 (73-135)||(33053019-33053081)
chr6 (70-135)||(546208-546273)
chr6 (230-335)||(21550281-21550386)
chr6 (70-131)||(29743181-29743242)
chr6 (70-126)||(8102912-8102968)
chr6 (69-152)||(26588319-26588403)
chr6 (72-131)||(8196237-8196296)
chr6 (72-131)||(12059603-12059662)
chr6 (72-131)||(25064424-25064483)
chr6 (73-135)||(7976038-7976100)
chr6 (75-145)||(9380190-9380260)
chr6 (73-131)||(33740409-33740467)
chr6 (69-131)||(35001778-35001840)
chr6 (233-282)||(5390101-5390150)
chr6 (217-278)||(17604921-17604982)
chr6 (233-290)||(18589815-18589872)
chr6 (235-288)||(25351705-25351758)
chr6 (75-131)||(10228867-10228923)
chr6 (69-145)||(31296987-31297063)
chr6 (71-131)||(32060057-32060117)
chr6 (72-131)||(8027948-8028007)
chr6 (72-131)||(8497156-8497215)
chr6 (72-131)||(12653132-12653191)
chr6 (72-131)||(17237116-17237175)
chr6 (72-131)||(17334941-17335000)
chr6 (72-131)||(23947147-23947206)
chr6 (69-132)||(27097489-27097552)
chr6 (76-131)||(33110799-33110854)
chr6 (69-136)||(34018736-34018803)
chr6 (217-280)||(34601589-34601652)
chr6 (217-280)||(34628131-34628194)
chr6 (217-280)||(34722865-34722928)
chr6 (70-136)||(1933540-1933606)
chr6 (70-135)||(14802004-14802070)
chr6 (216-278)||(18681162-18681224)
chr6 (69-131)||(28634940-28635002)
chr6 (217-254)||(2555120-2555157)
chr6 (69-118)||(6957335-6957384)
[»] chr1 (79 HSPs)
chr1 (214-351)||(10709869-10710006)
chr1 (215-351)||(26722020-26722156)
chr1 (69-135)||(35484238-35484304)
chr1 (220-347)||(32351902-32352029)
chr1 (220-350)||(5498434-5498564)
chr1 (69-143)||(14489443-14489517)
chr1 (70-135)||(24583325-24583390)
chr1 (73-138)||(48217622-48217687)
chr1 (70-135)||(48750364-48750429)
chr1 (69-145)||(7337510-7337586)
chr1 (69-145)||(10776308-10776384)
chr1 (69-145)||(51373705-51373781)
chr1 (69-144)||(27456654-27456729)
chr1 (69-131)||(13144659-13144721)
chr1 (69-135)||(49504442-49504508)
chr1 (70-135)||(34412940-34413005)
chr1 (70-135)||(36775558-36775623)
chr1 (77-130)||(37720004-37720057)
chr1 (69-134)||(45789721-45789785)
chr1 (70-135)||(49627092-49627157)
chr1 (75-151)||(31984324-31984400)
chr1 (217-281)||(39431775-39431839)
chr1 (83-145)||(5984005-5984067)
chr1 (69-135)||(11462329-11462395)
chr1 (69-135)||(29738511-29738577)
chr1 (69-127)||(31317923-31317981)
chr1 (69-131)||(34878125-34878187)
chr1 (71-144)||(31919159-31919232)
chr1 (70-131)||(44543455-44543516)
chr1 (70-135)||(45415737-45415802)
chr1 (83-131)||(27579989-27580037)
chr1 (72-131)||(5701451-5701510)
chr1 (72-131)||(11454129-11454188)
chr1 (72-131)||(31837026-31837085)
chr1 (73-135)||(15431517-15431579)
chr1 (76-130)||(16162012-16162066)
chr1 (69-131)||(16989554-16989616)
chr1 (69-131)||(21687561-21687623)
chr1 (69-127)||(35461901-35461959)
chr1 (69-131)||(38520362-38520424)
chr1 (69-131)||(47133086-47133148)
chr1 (69-131)||(50148562-50148624)
chr1 (69-123)||(51916522-51916576)
chr1 (82-135)||(14872818-14872871)
chr1 (70-135)||(19061088-19061153)
chr1 (70-135)||(21947466-21947531)
chr1 (70-135)||(24583129-24583194)
chr1 (72-136)||(7342909-7342973)
chr1 (69-145)||(12635339-12635415)
chr1 (233-281)||(20797149-20797197)
chr1 (72-131)||(7997981-7998040)
chr1 (72-131)||(9687035-9687094)
chr1 (72-131)||(9919580-9919639)
chr1 (72-131)||(50165929-50165988)
chr1 (69-132)||(50377505-50377568)
chr1 (72-131)||(51868475-51868534)
chr1 (72-131)||(51872055-51872114)
chr1 (69-131)||(8211154-8211216)
chr1 (220-282)||(22190372-22190434)
chr1 (220-294)||(25503583-25503656)
chr1 (69-127)||(31130420-31130478)
chr1 (69-135)||(44915818-44915884)
chr1 (230-263)||(3543700-3543733)
chr1 (72-129)||(9172684-9172741)
chr1 (72-129)||(9180666-9180723)
chr1 (82-135)||(18939499-18939552)
chr1 (233-278)||(26997553-26997598)
chr1 (72-129)||(34519322-34519379)
chr1 (217-278)||(35542526-35542587)
chr1 (69-125)||(1742476-1742532)
chr1 (69-145)||(4413283-4413359)
chr1 (83-131)||(7836657-7836705)
chr1 (70-134)||(13075504-13075567)
chr1 (72-136)||(19715725-19715789)
chr1 (100-136)||(26535514-26535550)
chr1 (232-284)||(32643357-32643409)
chr1 (77-137)||(34529251-34529311)
chr1 (72-136)||(40880843-40880907)
chr1 (229-269)||(41805330-41805370)
[»] chr8 (62 HSPs)
chr8 (215-349)||(45254425-45254559)
chr8 (217-350)||(17660261-17660394)
chr8 (217-336)||(36158587-36158706)
chr8 (69-134)||(16928602-16928667)
chr8 (69-145)||(23230811-23230887)
chr8 (75-135)||(37971461-37971521)
chr8 (69-131)||(8412367-8412429)
chr8 (69-131)||(30568166-30568228)
chr8 (73-135)||(31013457-31013519)
chr8 (70-135)||(43833842-43833907)
chr8 (73-145)||(41896685-41896757)
chr8 (70-145)||(15344476-15344551)
chr8 (70-145)||(15433541-15433616)
chr8 (70-145)||(15524845-15524920)
chr8 (220-347)||(16374693-16374820)
chr8 (220-294)||(4986655-4986729)
chr8 (69-135)||(7883086-7883152)
chr8 (69-131)||(24099101-24099163)
chr8 (70-132)||(42046402-42046464)
chr8 (70-135)||(7198041-7198106)
chr8 (70-135)||(14585855-14585920)
chr8 (217-278)||(20825792-20825853)
chr8 (69-145)||(45445656-45445732)
chr8 (70-145)||(18890545-18890620)
chr8 (73-135)||(1236546-1236608)
chr8 (229-287)||(13878086-13878144)
chr8 (69-135)||(21237966-21238032)
chr8 (69-135)||(27110310-27110376)
chr8 (69-138)||(17693458-17693527)
chr8 (217-278)||(41663955-41664016)
chr8 (72-136)||(33896276-33896340)
chr8 (72-135)||(3673619-3673682)
chr8 (69-144)||(41060108-41060183)
chr8 (72-131)||(44099766-44099825)
chr8 (69-135)||(14544740-14544806)
chr8 (72-138)||(14906753-14906819)
chr8 (74-136)||(37565711-37565773)
chr8 (70-135)||(10377867-10377932)
chr8 (69-134)||(33347366-33347431)
chr8 (72-136)||(2656060-2656124)
chr8 (69-145)||(9637254-9637330)
chr8 (71-131)||(17019429-17019489)
chr8 (71-131)||(17549866-17549926)
chr8 (69-137)||(34611993-34612061)
chr8 (76-136)||(36948290-36948350)
chr8 (69-125)||(41684561-41684617)
chr8 (72-131)||(4809159-4809218)
chr8 (72-131)||(9619187-9619246)
chr8 (233-288)||(12333330-12333385)
chr8 (71-138)||(13575934-13576001)
chr8 (244-287)||(25194570-25194613)
chr8 (72-131)||(29777414-29777473)
chr8 (69-135)||(7677128-7677194)
chr8 (73-123)||(8867998-8868048)
chr8 (73-131)||(25190914-25190972)
chr8 (83-145)||(29617133-29617195)
chr8 (73-131)||(43889955-43890013)
chr8 (217-278)||(8301295-8301356)
chr8 (217-278)||(20492270-20492331)
chr8 (233-281)||(10800264-10800312)
chr8 (71-131)||(33214518-33214578)
chr8 (69-145)||(34493170-34493246)
[»] chr7 (59 HSPs)
chr7 (214-351)||(34233120-34233257)
chr7 (215-345)||(4078698-4078828)
chr7 (220-347)||(13441481-13441608)
chr7 (69-145)||(40993325-40993401)
chr7 (69-135)||(8001393-8001459)
chr7 (69-135)||(34899454-34899520)
chr7 (69-135)||(39171437-39171503)
chr7 (69-135)||(42978788-42978854)
chr7 (70-135)||(48930885-48930950)
chr7 (69-145)||(48316659-48316735)
chr7 (220-347)||(33795666-33795793)
chr7 (69-131)||(37837305-37837367)
chr7 (220-294)||(45994052-45994126)
chr7 (69-135)||(47590489-47590555)
chr7 (69-135)||(48061600-48061666)
chr7 (70-131)||(45349647-45349708)
chr7 (69-135)||(12141154-12141221)
chr7 (217-336)||(18768837-18768956)
chr7 (70-145)||(25255395-25255470)
chr7 (217-335)||(8772279-8772397)
chr7 (69-135)||(28044603-28044669)
chr7 (69-151)||(35664982-35665064)
chr7 (217-278)||(17722127-17722188)
chr7 (70-135)||(35133125-35133190)
chr7 (74-135)||(35261481-35261542)
chr7 (72-136)||(433521-433585)
chr7 (72-144)||(29617550-29617621)
chr7 (69-137)||(38050913-38050981)
chr7 (69-128)||(19404604-19404663)
chr7 (72-131)||(22927700-22927759)
chr7 (226-285)||(43573026-43573085)
chr7 (69-152)||(46822590-46822673)
chr7 (83-145)||(19297038-19297100)
chr7 (69-135)||(28407765-28407831)
chr7 (223-288)||(12377562-12377627)
chr7 (70-135)||(22743122-22743187)
chr7 (217-278)||(29969466-29969527)
chr7 (83-135)||(9449998-9450050)
chr7 (73-152)||(9977061-9977141)
chr7 (69-133)||(26610627-26610691)
chr7 (69-145)||(26623636-26623712)
chr7 (72-132)||(37849026-37849086)
chr7 (72-131)||(7640605-7640664)
chr7 (72-131)||(17222830-17222889)
chr7 (72-131)||(23085709-23085768)
chr7 (71-138)||(34893429-34893496)
chr7 (69-135)||(2407773-2407839)
chr7 (73-131)||(13592340-13592398)
chr7 (95-145)||(13796802-13796852)
chr7 (69-131)||(38798963-38799025)
chr7 (73-126)||(4530232-4530285)
chr7 (73-126)||(28476413-28476466)
chr7 (70-131)||(31235612-31235673)
chr7 (70-131)||(46700217-46700277)
chr7 (74-131)||(46822203-46822260)
chr7 (233-281)||(37074174-37074222)
chr7 (84-136)||(38273228-38273280)
chr7 (233-281)||(47550414-47550462)
chr7 (233-281)||(47554879-47554927)
[»] chr4 (82 HSPs)
chr4 (215-351)||(10561910-10562046)
chr4 (215-351)||(20396984-20397120)
chr4 (215-348)||(34977354-34977487)
chr4 (274-351)||(46342445-46342522)
chr4 (69-135)||(2520975-2521041)
chr4 (220-294)||(29552391-29552465)
chr4 (69-131)||(35348507-35348569)
chr4 (70-135)||(31891135-31891200)
chr4 (217-287)||(7661895-7661965)
chr4 (69-135)||(19853359-19853425)
chr4 (230-336)||(26695362-26695468)
chr4 (76-145)||(17949178-17949247)
chr4 (76-145)||(17953030-17953099)
chr4 (69-146)||(43853628-43853705)
chr4 (220-347)||(8936497-8936624)
chr4 (220-347)||(20676458-20676585)
chr4 (69-131)||(9643576-9643638)
chr4 (220-294)||(19649171-19649245)
chr4 (69-135)||(48257479-48257545)
chr4 (69-135)||(53811224-53811289)
chr4 (69-145)||(56040493-56040569)
chr4 (70-145)||(43510382-43510457)
chr4 (72-138)||(20569450-20569516)
chr4 (69-135)||(29966522-29966588)
chr4 (69-135)||(32766710-32766776)
chr4 (72-138)||(34024268-34024334)
chr4 (69-145)||(6155067-6155146)
chr4 (70-135)||(27652139-27652204)
chr4 (70-119)||(33332438-33332487)
chr4 (74-131)||(35261392-35261449)
chr4 (70-135)||(47320260-47320325)
chr4 (70-126)||(18935987-18936043)
chr4 (69-133)||(21686089-21686153)
chr4 (98-146)||(37465667-37465715)
chr4 (74-130)||(51888063-51888119)
chr4 (217-288)||(3128582-3128653)
chr4 (72-131)||(21090342-21090401)
chr4 (72-135)||(22611379-22611442)
chr4 (73-135)||(1621362-1621424)
chr4 (69-131)||(4644058-4644120)
chr4 (302-348)||(11585858-11585904)
chr4 (69-135)||(13634311-13634377)
chr4 (69-135)||(26633518-26633584)
chr4 (69-135)||(33921250-33921316)
chr4 (73-143)||(48006598-48006668)
chr4 (69-131)||(53444318-53444380)
chr4 (217-278)||(1827128-1827189)
chr4 (70-135)||(29960797-29960862)
chr4 (217-278)||(47420296-47420357)
chr4 (77-129)||(9048866-9048918)
chr4 (72-136)||(25274078-25274142)
chr4 (69-145)||(36161897-36161973)
chr4 (72-131)||(2115418-2115477)
chr4 (72-131)||(9528707-9528766)
chr4 (76-131)||(11299864-11299919)
chr4 (69-136)||(12199541-12199607)
chr4 (69-136)||(21662632-21662699)
chr4 (69-136)||(21671396-21671463)
chr4 (217-288)||(23280285-23280356)
chr4 (98-145)||(36184717-36184764)
chr4 (88-135)||(36194904-36194951)
chr4 (92-135)||(42032399-42032442)
chr4 (72-131)||(44947612-44947671)
chr4 (74-145)||(52060775-52060846)
chr4 (72-131)||(52097746-52097805)
chr4 (72-131)||(53616480-53616539)
chr4 (73-111)||(4142615-4142653)
chr4 (69-135)||(19896470-19896536)
chr4 (153-187)||(20399739-20399773)
chr4 (69-131)||(28857601-28857663)
chr4 (72-138)||(35964806-35964872)
chr4 (73-131)||(56156493-56156551)
chr4 (72-137)||(2624645-2624710)
chr4 (70-111)||(7393418-7393459)
chr4 (77-134)||(9145746-9145803)
chr4 (82-131)||(22301050-22301099)
chr4 (69-134)||(52933796-52933861)
chr4 (73-130)||(56199297-56199354)
chr4 (69-145)||(9178539-9178615)
chr4 (70-134)||(9714107-9714171)
chr4 (70-145)||(10496521-10496597)
chr4 (91-135)||(44596856-44596900)
[»] chr3 (79 HSPs)
chr3 (69-156)||(24175978-24176065)
chr3 (217-351)||(43120274-43120407)
chr3 (70-145)||(42460914-42460989)
chr3 (154-211)||(24176086-24176143)
chr3 (70-135)||(48650582-48650647)
chr3 (69-135)||(6954543-6954609)
chr3 (217-351)||(23819984-23820114)
chr3 (69-145)||(14859655-14859731)
chr3 (70-137)||(31271680-31271747)
chr3 (69-146)||(12050495-12050572)
chr3 (217-278)||(12333675-12333736)
chr3 (69-134)||(36461284-36461349)
chr3 (69-145)||(9797381-9797457)
chr3 (72-135)||(21313211-21313274)
chr3 (217-288)||(30165910-30165981)
chr3 (70-137)||(38142698-38142765)
chr3 (69-135)||(4711657-4711723)
chr3 (76-134)||(6903102-6903160)
chr3 (70-135)||(7546790-7546856)
chr3 (69-135)||(45568292-45568358)
chr3 (73-135)||(46304371-46304433)
chr3 (69-135)||(52922964-52923030)
chr3 (70-135)||(628771-628836)
chr3 (70-135)||(21289662-21289727)
chr3 (69-134)||(44959820-44959885)
chr3 (70-135)||(53807706-53807771)
chr3 (220-347)||(27924403-27924530)
chr3 (217-336)||(46907257-46907376)
chr3 (73-135)||(9998642-9998704)
chr3 (73-135)||(10108411-10108473)
chr3 (73-135)||(10229651-10229713)
chr3 (69-135)||(21533656-21533722)
chr3 (69-131)||(33580059-33580121)
chr3 (69-131)||(40487504-40487566)
chr3 (69-135)||(40556877-40556943)
chr3 (69-131)||(50194182-50194244)
chr3 (69-134)||(35175580-35175645)
chr3 (74-135)||(51303495-51303556)
chr3 (70-135)||(51923902-51923967)
chr3 (70-145)||(16235591-16235666)
chr3 (69-152)||(47896309-47896392)
chr3 (69-112)||(48199979-48200022)
chr3 (69-135)||(21431788-21431854)
chr3 (69-135)||(32701666-32701732)
chr3 (69-135)||(43017063-43017129)
chr3 (69-131)||(46934824-46934886)
chr3 (69-135)||(54149166-54149232)
chr3 (70-135)||(8914887-8914952)
chr3 (233-290)||(11757612-11757669)
chr3 (217-278)||(19918819-19918880)
chr3 (72-133)||(21916656-21916717)
chr3 (90-135)||(38859980-38860025)
chr3 (69-133)||(7448761-7448825)
chr3 (69-133)||(7456903-7456967)
chr3 (83-135)||(10233245-10233297)
chr3 (84-131)||(2598407-2598454)
chr3 (72-131)||(3848749-3848808)
chr3 (72-131)||(25162621-25162680)
chr3 (72-131)||(25631356-25631415)
chr3 (70-145)||(27706074-27706149)
chr3 (72-131)||(29503646-29503705)
chr3 (72-131)||(30648549-30648608)
chr3 (72-131)||(32607654-32607713)
chr3 (72-131)||(36906307-36906366)
chr3 (70-145)||(41818380-41818455)
chr3 (72-131)||(44907229-44907288)
chr3 (70-129)||(53508403-53508462)
chr3 (69-131)||(12116283-12116345)
chr3 (69-131)||(22803215-22803277)
chr3 (69-131)||(38545978-38546040)
chr3 (98-144)||(52115897-52115943)
chr3 (69-138)||(953380-953449)
chr3 (70-135)||(27856340-27856405)
chr3 (69-134)||(35864813-35864878)
chr3 (73-145)||(4821971-4822043)
chr3 (233-281)||(9827300-9827348)
chr3 (72-136)||(38440421-38440485)
chr3 (74-134)||(46979832-46979892)
chr3 (70-122)||(51487270-51487322)
[»] chr2 (68 HSPs)
chr2 (70-145)||(10237065-10237140)
chr2 (70-145)||(35220504-35220579)
chr2 (69-135)||(7677721-7677787)
chr2 (70-135)||(7646664-7646729)
chr2 (70-131)||(18763658-18763719)
chr2 (74-135)||(27097260-27097321)
chr2 (69-145)||(1421852-1421927)
chr2 (69-145)||(29173565-29173641)
chr2 (70-145)||(10929841-10929916)
chr2 (69-135)||(5427717-5427783)
chr2 (69-135)||(31788642-31788708)
chr2 (69-135)||(33585583-33585649)
chr2 (70-132)||(34128533-34128595)
chr2 (76-145)||(12554036-12554105)
chr2 (72-131)||(4228315-4228374)
chr2 (72-131)||(30420861-30420920)
chr2 (241-336)||(35489271-35489366)
chr2 (77-135)||(280984-281042)
chr2 (70-136)||(4041443-4041509)
chr2 (69-135)||(4100522-4100587)
chr2 (69-135)||(4778939-4779005)
chr2 (69-131)||(12677299-12677361)
chr2 (73-135)||(19062199-19062261)
chr2 (217-335)||(28399137-28399255)
chr2 (69-130)||(1415748-1415809)
chr2 (70-135)||(3309131-3309196)
chr2 (70-143)||(17151602-17151675)
chr2 (70-135)||(17248996-17249061)
chr2 (70-131)||(33923895-33923956)
chr2 (69-145)||(11985081-11985157)
chr2 (70-134)||(14955716-14955780)
chr2 (75-131)||(19028768-19028824)
chr2 (69-129)||(31193184-31193244)
chr2 (73-144)||(4903997-4904068)
chr2 (72-131)||(9986172-9986231)
chr2 (72-131)||(27248981-27249040)
chr2 (72-131)||(40659762-40659821)
chr2 (72-126)||(6174013-6174067)
chr2 (69-131)||(8806058-8806120)
chr2 (83-145)||(10548363-10548425)
chr2 (69-131)||(24461633-24461695)
chr2 (69-135)||(28533802-28533868)
chr2 (69-131)||(29279418-29279480)
chr2 (69-131)||(36692064-36692126)
chr2 (220-281)||(4221529-4221590)
chr2 (235-284)||(39115623-39115672)
chr2 (69-133)||(17994574-17994638)
chr2 (69-125)||(28037283-28037339)
chr2 (69-133)||(36942970-36943034)
chr2 (69-145)||(37994460-37994536)
chr2 (72-131)||(84011-84070)
chr2 (69-144)||(8809456-8809531)
chr2 (72-131)||(8971458-8971517)
chr2 (220-347)||(22724090-22724217)
chr2 (72-135)||(27949614-27949677)
chr2 (72-131)||(36234190-36234249)
chr2 (69-132)||(37876454-37876517)
chr2 (83-130)||(39310728-39310775)
chr2 (72-131)||(43396970-43397028)
chr2 (226-288)||(19852418-19852480)
chr2 (75-136)||(16376124-16376185)
chr2 (103-135)||(6358763-6358795)
chr2 (233-281)||(9667609-9667657)
chr2 (235-279)||(13838670-13838714)
chr2 (74-126)||(18107603-18107655)
chr2 (233-281)||(21966183-21966231)
chr2 (74-126)||(31128638-31128690)
chr2 (69-145)||(33760041-33760117)
[»] scaffold0445 (1 HSPs)
scaffold0445 (69-131)||(1524-1586)
[»] scaffold0179 (3 HSPs)
scaffold0179 (240-313)||(11150-11223)
scaffold0179 (309-351)||(8951-8993)
scaffold0179 (309-351)||(13885-13927)
[»] scaffold0884 (1 HSPs)
scaffold0884 (69-145)||(1820-1896)
[»] scaffold0050 (1 HSPs)
scaffold0050 (69-145)||(65889-65965)
[»] scaffold0049 (1 HSPs)
scaffold0049 (69-145)||(71147-71223)
[»] scaffold0088 (1 HSPs)
scaffold0088 (75-134)||(50953-51012)
[»] scaffold0131 (1 HSPs)
scaffold0131 (217-287)||(3145-3215)
[»] scaffold0347 (1 HSPs)
scaffold0347 (69-128)||(6213-6272)
[»] scaffold0219 (1 HSPs)
scaffold0219 (69-131)||(14718-14780)
[»] scaffold0136 (1 HSPs)
scaffold0136 (69-131)||(9889-9951)
[»] scaffold0026 (1 HSPs)
scaffold0026 (69-135)||(71717-71783)
[»] scaffold0472 (1 HSPs)
scaffold0472 (217-278)||(4744-4805)
[»] scaffold0603 (1 HSPs)
scaffold0603 (73-134)||(7892-7954)
[»] scaffold0127 (1 HSPs)
scaffold0127 (69-131)||(15672-15734)
[»] scaffold0022 (1 HSPs)
scaffold0022 (70-131)||(83264-83325)
[»] scaffold0495 (1 HSPs)
scaffold0495 (75-131)||(5586-5642)
[»] scaffold0017 (1 HSPs)
scaffold0017 (73-133)||(32598-32658)
[»] scaffold0746 (1 HSPs)
scaffold0746 (230-288)||(1556-1614)
[»] scaffold0009 (1 HSPs)
scaffold0009 (69-131)||(57935-57997)
[»] scaffold1350 (1 HSPs)
scaffold1350 (217-274)||(1042-1099)
[»] scaffold0150 (1 HSPs)
scaffold0150 (70-131)||(10053-10114)
[»] scaffold0015 (1 HSPs)
scaffold0015 (69-130)||(3892-3953)


Alignment Details
Target: scaffold0007 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 214 - 351
Target Start/End: Complemental strand, 183671 - 183534
Alignment:
Q  214 ctgaagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttc 313  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  183671 ctgaagaaagatcttttgtcgtttaaggtggattttgaaaaggcctatgagtctgttgactggggttatttggattatgttcttagccgtatgtcttttc 183572  T
Q  314 cggttctgtggagaaagtggattaaagagtgtgttagt 351  Q
    |||||||||||||||||||||||| |||||||||||||    
T  183571 cggttctgtggagaaagtggattagagagtgtgttagt 183534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 4e-57; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 215 - 351
Target Start/End: Complemental strand, 6050795 - 6050659
Alignment:
Q  215 tgaagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttcc 314  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||  ||||||||||||||||    
T  6050795 tgaagaaagatcttatgttgtttaaggtggattttgaaaaggcctatgactctgtcgattggggttatttggattctgttctgggccgtatgtcttttcc 6050696  T
Q  315 ggttctgtggagaaagtggattaaagagtgtgttagt 351  Q
    ||||||||||| |||||||||||||||||||||||||    
T  6050695 ggttctgtggataaagtggattaaagagtgtgttagt 6050659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 215 - 347
Target Start/End: Original strand, 6999588 - 6999720
Alignment:
Q  215 tgaagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttcc 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |  || || |||||||||||||||||| || |  | |||||||||||| |    
T  6999588 tgaagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgattaagtcgattggggttatttggattctattatgggtcgtatgtctttttc 6999687  T
Q  315 ggttctgtggagaaagtggattaaagagtgtgt 347  Q
     | ||||||||||||||||||||||||||||||    
T  6999688 agctctgtggagaaagtggattaaagagtgtgt 6999720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 38598038 - 38597972
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  38598038 catcgctaaaaacgtaaagggtgaatttgcgaacaaactcacaacacccaagttaatagcatacaac 38597972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 34945634 - 34945558
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| || ||||||    
T  34945634 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgc 34945558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 8096345 - 8096407
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||    
T  8096345 catcgctaaaaatgtaaagggtgaatttgcgaacaaactcacaccacccaagttaatagcata 8096407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 13007470 - 13007404
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  13007470 catcgctaaaaacgtaaagggtgaatctgcaaacaaactcacagcacccaagttaatagcatacaac 13007404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 9113572 - 9113638
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||| |||||||||| || ||||||||||||||||||||||    
T  9113572 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcagaacacccaagttaatagcatacaac 9113638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 14211467 - 14211401
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    ||||||||||| ||| ||||||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  14211467 atcgctaaaaacgtatagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaaca 14211401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 25980398 - 25980336
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  25980398 catcgctaaaaacgtaaagggtgaatctgcaaacaaactcacatcacccaagttaatagcata 25980336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 2979154 - 2979219
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||| | ||||||||||||||||||||    
T  2979154 atcgctaaaaatgtatagggtgaatctgcgaacaaactcacaacatccaagttaatagcatacaac 2979219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 25591831 - 25591726
Alignment:
Q  232 ttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccggttctgtggagaaagt 331  Q
    ||||| || ||||||||||||||||| |||||||| || || ||||| |||||||| |||||| |  |||||||||||||||| || || |||||| |||    
T  25591831 ttgttcaaagtggattttgaaaaggcatatgactcggtagattgggggtatttggactctgttttgggccgtatgtcttttcctgtgctttggagagagt 25591732  T
Q  332 ggatta 337  Q
    ||||||    
T  25591731 ggatta 25591726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 24229631 - 24229697
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| |||||| |||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  24229631 catcgctaaaaacgtaaagagtgaatctgcgaacaaactcacagcacccaagttaatagcatacaac 24229697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 28540754 - 28540819
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| ||||||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  28540754 atcgctaaaaacgtatagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaac 28540819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 290
Target Start/End: Original strand, 30508610 - 30508683
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattc 290  Q
    |||||||||||| ||||||||||||||||||| ||||| || || ||||||||||| |||| ||| ||||||||    
T  30508610 aagaaagatcttatgttgtttaaggtggatttcgaaaaagcgtacgactctgttgagtgggattacttggattc 30508683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 290
Target Start/End: Original strand, 30548953 - 30549026
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattc 290  Q
    |||||||||||| ||||||||||||||||||| ||||| || || ||||||||||| |||| ||| ||||||||    
T  30548953 aagaaagatcttatgttgtttaaggtggatttcgaaaaagcgtacgactctgttgagtgggattacttggattc 30549026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 31391614 - 31391667
Alignment:
Q  83 taaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||||||||||    
T  31391614 taaagggtgaatttgcgaacaaactcacaacatccaagttaatagcatacaaca 31391667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 348
Target Start/End: Original strand, 27164682 - 27164813
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccgg 316  Q
    |||||||||||| ||||||| || ||||| ||||||||||| || ||||||||||| ||||| ||  | |||   ||| |  |  ||||||||||||||     
T  27164682 aagaaagatcttatgttgttcaaagtggactttgaaaaggcttacgactctgttgattgggggtacctagatgaggttatgggtagtatgtcttttccga 27164781  T
Q  317 ttctgtggagaaagtggattaaagagtgtgtt 348  Q
     | ||||||| |||||||||||||||||||||    
T  27164782 ctttgtggaggaagtggattaaagagtgtgtt 27164813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 43148976 - 43148917
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||||||||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  43148976 cgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcata 43148917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 6011985 - 6012047
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||| |||||| ||||||||||||| ||| ||||||||||||  ||||||||||||||||||    
T  6011985 catcgttaaaaacgtaaagggtgaatctgcgaacaaactcacatcacccaagttaatagcata 6012047  T

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Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 11976782 - 11976844
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||| | ||||||||||| ||||    
T  11976782 catcgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagttaataacata 11976844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 13422174 - 13422112
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  13422174 catcgctaaaaacgtaaaggatgaatatgcgaacaaactcacaacatccaagttaatagcata 13422112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 26825667 - 26825605
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||| ||||||||||||| | | ||||||||||||  ||||||||||||||||||||||    
T  26825667 gctaaaaacgtaaagggtgaatctacgaacaaactcacagcacccaagttaatagcatacaac 26825605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 25856026 - 25856087
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    ||||||||||| ||||||||||| ||||||||||| ||||| |||||||| ||||| |||||    
T  25856026 aagaaagatctgttgttgtttaaagtggattttgagaaggcgtatgactcagttgattgggg 25856087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 10723001 - 10722938
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcataca 133  Q
    ||||||||||||||||| ||||||| | | ||||||||||||| || |||||||||| ||||||    
T  10723001 atcgctaaaaatgtaaatggtgaatctacgaacaaactcacaacactcaagttaataacataca 10722938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 11867869 - 11867814
Alignment:
Q  90 tgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||| ||| ||||| |||||||||||||| |||||||||||||||||| ||||||    
T  11867869 tgaatctgcgaacaagctcacaatacccaaattaatagcatacaacaacaaaatgc 11867814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 34881966 - 34881907
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||  |||||| ||||| ||||||||||||||||| | ||||||||||||||||    
T  34881966 cgctaaaaacataaaggatgaatctgcaaacaaactcacaacatccaagttaatagcata 34881907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 10332394 - 10332456
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||| ||||| ||  ||||||||||||  ||||||||||||||||||    
T  10332394 catcgctaaaaacgtaaaggatgaatctgtgaacaaactcacatcacccaagttaatagcata 10332456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 38007598 - 38007536
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||| ||||||| ||  ||||||||||||  ||||||||||||||||||    
T  38007598 catcgctaaaaacgtaaaaggtgaatatgtgaacaaactcacagcacccaagttaatagcata 38007536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 8088063 - 8088124
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    |||||||| ||||| | ||||| ||| |||||||||| || |||||||||||||||||||||    
T  8088063 gctaaaaaggtaaaagatgaatctgcgaacaaactcataacacccaagttaatagcatacaa 8088124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 23239934 - 23239873
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    |||||| ||||||||||||| || |||||||||| |||||| ||||| |||||||| |||||    
T  23239934 aagaaatatcttttgttgttcaaagtggattttgcaaaggcgtatgattctgttgattgggg 23239873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 14082243 - 14082319
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||||  |||||||||||| ||| ||||||||| ||  | | |||||||||||||||||| || ||||||    
T  14082243 catcgctaaaaacataaagggtgaatctgcgaacaaactcccatcatcgaagttaatagcatacaacgacaaaatgc 14082319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 3271232 - 3271291
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| |||||||||| || | ||||||||||||||||    
T  3271232 cgctaaaaacgtaaaggatgaatctgcgaacaaactcataacatccaagttaatagcata 3271291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 4954241 - 4954182
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||||||||| ||||| ||  ||||||||||||| | | ||||||||||||||    
T  4954241 cgctaaaaatgtaaaggatgaatatgtgaacaaactcacaacatcaaagttaatagcata 4954182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 7242033 - 7241974
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||||    
T  7242033 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcata 7241974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 7247208 - 7247149
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||||    
T  7247208 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcata 7247149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 135
Target Start/End: Complemental strand, 15571697 - 15571662
Alignment:
Q  100 aacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||||| ||||||||||||||||||||||    
T  15571697 aacaaactcacaacacccaagttaatagcatacaac 15571662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 16981541 - 16981482
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||  ||||| ||| ||||||||||||| | ||||||||||||||||    
T  16981541 cgctaaaaacgtaaagaatgaatctgcgaacaaactcacaacatccaagttaatagcata 16981482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 36257312 - 36257261
Alignment:
Q  233 tgtttaaggtggattttgaaaaggcctatgactctgttgactggggttattt 284  Q
    ||||||||||||||||||| || || ||||| |||||||| |||||||||||    
T  36257312 tgtttaaggtggattttgagaaagcgtatgattctgttgattggggttattt 36257261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 41184270 - 41184329
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||||    
T  41184270 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcata 41184329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 8772013 - 8772067
Alignment:
Q  74 ctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagc 128  Q
    ||||||| ||||||| |||||||||||||||||||| |  | |||||||||||||    
T  8772013 ctaaaaacgtaaaggatgaatttgcaaacaaactcatagcatccaagttaatagc 8772067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 27266689 - 27266755
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaac 138  Q
    ||||||||| ||||| | ||||| ||| ||||||||||||  | |||||||||||||||| ||||||    
T  27266689 cgctaaaaacgtaaatgatgaatctgcgaacaaactcacagcatccaagttaatagcatataacaac 27266755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 28235831 - 28235777
Alignment:
Q  77 aaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||| | ||||| ||| ||||||||||||| | ||||||||||||||||    
T  28235831 aaaatgtaaatgatgaatctgcgaacaaactcacaacatccaagttaatagcata 28235777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 37985965 - 37986035
Alignment:
Q  74 ctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatg 144  Q
    ||||||| ||||| | ||||| ||||||||||||||||  |  ||||||||||||||||||| || |||||    
T  37985965 ctaaaaacgtaaaagatgaatctgcaaacaaactcacatcattcaagttaatagcatacaacgacaaaatg 37986035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 19103315 - 19103380
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| ||| ||||| ||| |||||||||| |  ||| ||||||||||||||||||    
T  19103315 atcgctaaaaacgtataggatgaatctgcgaacaaactcatagcaccaaagttaatagcatacaac 19103380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 10485550 - 10485610
Alignment:
Q  227 ttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttgga 287  Q
    |||||||||||||||| |||||| ||||||| ||||| ||| | || ||||| ||||||||    
T  10485550 ttttgttgtttaaggttgatttttaaaaggcgtatgattctatagattggggctatttgga 10485610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 26877962 - 26878014
Alignment:
Q  75 taaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatag 127  Q
    |||||| ||||||| ||||| ||| ||||||||||||| | ||||||||||||    
T  26877962 taaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatag 26878014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 41630712 - 41630668
Alignment:
Q  100 aacaaactcacaatacccaagttaatagcatacaacaactaaatg 144  Q
    ||||||||||||| ||| |||||||||||||||||| || |||||    
T  41630712 aacaaactcacaacacctaagttaatagcatacaacgacaaaatg 41630668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 42781405 - 42781345
Alignment:
Q  71 tcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||  ||||| ||||||||  ||||||||||||| | ||| ||||||||||||    
T  42781405 tcgctaaaaataaaaaggatgaatttgttaacaaactcacaacatccatgttaatagcata 42781345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 5e-53; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 214 - 351
Target Start/End: Original strand, 17077651 - 17077788
Alignment:
Q  214 ctgaagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttc 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| | | || |||||||||||||||||||||||| | |||||||||||||    
T  17077651 ctgaagaaagatcttttgttgtttaaggtggattttgaaaaggcttatgactttatcgattggggttatttggattctgttctaggtcgtatgtcttttc 17077750  T
Q  314 cggttctgtggagaaagtggattaaagagtgtgttagt 351  Q
    |||| |||||||||||||||||||||||||||||||||    
T  17077751 cggtcctgtggagaaagtggattaaagagtgtgttagt 17077788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 217 - 351
Target Start/End: Original strand, 11059449 - 11059583
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccgg 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| |  | || |||||||||||||    
T  11059449 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgattctgtcgattggggttatttggattctgttatgggtcgcatgtcttttccgg 11059548  T
Q  317 ttctgtggagaaagtggattaaagagtgtgttagt 351  Q
    | |||||||||||||||||||||||||||||||||    
T  11059549 tcctgtggagaaagtggattaaagagtgtgttagt 11059583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 145
Target Start/End: Original strand, 9341502 - 9341574
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| || ||||||    
T  9341502 gctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgc 9341574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 12170711 - 12170635
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||||||||||||||||| ||| | ||||||||||  ||||||||||||||||||||||| | ||||||    
T  12170711 catcgctaaaaatgtaaagggtgaatatgcgagcaaactcacagcacccaagttaatagcatacaacagcaaaatgc 12170635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 20226094 - 20226018
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||||  |||| | ||||||||| |||||||||||||||||||||||||||||||||||| || ||||||    
T  20226094 catcgctaaaaacataaatgatgaatttgcgaacaaactcacaatacccaagttaatagcatacaacgacaaaatgc 20226018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 22120078 - 22120002
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||||  |||| | ||||||||| |||||||||||||||||||||||||||||||||||| || ||||||    
T  22120078 catcgctaaaaacataaatgatgaatttgcgaacaaactcacaatacccaagttaatagcatacaacgacaaaatgc 22120002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 23128861 - 23128795
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||||||||||||||||| ||| ||||||||||||  |||||| |||||||||||||||    
T  23128861 catcgctaaaaatgtaaagggtgaatctgcgaacaaactcacagcacccaaattaatagcatacaac 23128795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 28981420 - 28981346
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaat 143  Q
    |||||||||||| ||||||||||||| ||  ||||||||||||| ||| ||||||||||||||||||||| ||||    
T  28981420 catcgctaaaaacgtaaagggtgaatatgtgaacaaactcacaacaccaaagttaatagcatacaacaacaaaat 28981346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 3913421 - 3913486
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    |||||||||||| |||||||||| || ||| ||||||||||||| |||||||||||||||||||||    
T  3913421 catcgctaaaaacgtaaagggtgcatctgcgaacaaactcacaacacccaagttaatagcatacaa 3913486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 30776905 - 30776845
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcat 130  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  30776905 atcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcat 30776845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 7515050 - 7515113
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcataca 133  Q
    ||||||||||| ||||||||||||||||| ||||||||||||  | ||||||||||||||||||    
T  7515050 atcgctaaaaacgtaaagggtgaatttgcgaacaaactcacagaaaccaagttaatagcataca 7515113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 29255293 - 29255360
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    |||||||||||| |||| |||||||| ||  ||||||||||||| |||||||||||||||||||||||    
T  29255293 catcgctaaaaacgtaatgggtgaatctgtgaacaaactcacaacacccaagttaatagcatacaaca 29255360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 32327067 - 32327130
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatac 132  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||  |||||||||||||||||||    
T  32327067 catcgctaaaaacgtaaagggtgaatatgcgaacaaactcacagcacccaagttaatagcatac 32327130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 67852 - 67914
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||| ||||||||||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  67852 gctaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaac 67914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 21426533 - 21426599
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||| ||||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  21426533 catcgctaaaaacgtaaacggtgaatatgcgaacaaactcacagcacccaagttaatagcatacaac 21426599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 26206882 - 26206808
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgtt 294  Q
    ||||| ||| |||||||||||||||| |||||||||||  |||| ||||| |||||||||||||| |||||||||    
T  26206882 aaagagcttatgttgtttaaggtggactttgaaaaggcacatgattctgtggactggggttatttagattctgtt 26206808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 30493775 - 30493709
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||| |||||| |||||| ||||| ||||||||||||||||    
T  30493775 catcgctaaaaacgtaaagggtgaatctgcgaacaaattcacaacacccaggttaatagcatacaac 30493709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 30608362 - 30608428
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||| |||||| ||||||| ||||||||||||||| ||||||| | ||||||||||||||||||||    
T  30608362 catcgttaaaaacgtaaaggatgaatttgcaaacaatctcacaacatccaagttaatagcatacaac 30608428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 606447 - 606382
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    ||||| |||||| ||||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  606447 catcgttaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaa 606382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 17576304 - 17576365
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    ||||||||||| ||||||||||| ||||||||||| ||||| |||||||| |||||||||||    
T  17576304 aagaaagatctgttgttgtttaaagtggattttgagaaggcgtatgactcagttgactgggg 17576365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 15675382 - 15675255
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccggttc 319  Q
    ||||| ||| |||||||||| ||||| ||||||||||| ||||| || || ||||||||||| || ||||||||| |  |  | ||||||||||| ||||    
T  15675382 aaagagcttatgttgtttaaagtggactttgaaaaggcttatgattcggtggactggggttacttagattctgttatgggttgcatgtcttttcctgttc 15675283  T
Q  320 tgtggagaaagtggattaaagagtgtgt 347  Q
    | |||||||| ||||  ||||| |||||    
T  15675282 tttggagaaaatggagcaaagaatgtgt 15675255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 679347 - 679285
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||| ||||||||||||| | | ||||||||||||| ||| ||||||||||||||||||    
T  679347 gctaaaaacgtaaagggtgaatctacgaacaaactcacaacacctaagttaatagcatacaac 679285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 29319724 - 29319790
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||| ||||||| ||| |||||||||| || | ||||||||||||||||||||    
T  29319724 catcgctaaaaacgtaaaaggtgaatctgcgaacaaactcataacaaccaagttaatagcatacaac 29319790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 33053019 - 33053081
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||| ||||||||||||| ||| ||||||||||||  | ||||||||||||||||||||    
T  33053019 gctaaaaacgtaaagggtgaatatgcgaacaaactcacagcatccaagttaatagcatacaac 33053081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 546273 - 546208
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| ||| ||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  546273 atcgctaaaaacgtataggatgaatctgcgaacaaactcacagcacccaagttaatagcatacaac 546208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 335
Target Start/End: Complemental strand, 21550386 - 21550281
Alignment:
Q  230 tgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccggttctgtggagaaa 329  Q
    |||| ||||| |||||||||||||| || ||||| |||||||||| ||| |||||||||||  || | |   | ||||||||||||||||||||| | ||    
T  21550386 tgttatttaaagtggattttgaaaaagcatatgattctgttgactagggctatttggattcgattatgaaaggcatgtcttttccggttctgtggcggaa 21550287  T
Q  330 gtggat 335  Q
    ||||||    
T  21550286 gtggat 21550281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 29743242 - 29743181
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||| ||||||||||||||||  ||||||||||||| | ||||||||||| ||||    
T  29743242 atcgctaaaaacgtaaagggtgaatttgagaacaaactcacaacaaccaagttaataacata 29743181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 8102968 - 8102912
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaata 126  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||  |||||||||||||    
T  8102968 atcgctaaaaacgtaaaaggtgaatctgcaaacaaactcacagcacccaagttaata 8102912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 26588319 - 26588403
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatg-ctaaaaat 152  Q
    ||||||||||||  |||||||||||  ||||||||||||||| | | ||||||||| ||||||||||| | ||||| ||||||||    
T  26588319 catcgctaaaaacttaaagggtgaagctgcaaacaaactcacgacatccaagttaagagcatacaacagcaaaatgtctaaaaat 26588403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 8196237 - 8196296
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||||||||| ||||||||| |||| |||||||  | ||||||||||||||||    
T  8196237 cgctaaaaatgtaaaggatgaatttgcgaacacactcacagcatccaagttaatagcata 8196296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 12059603 - 12059662
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  12059603 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcata 12059662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 25064483 - 25064424
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  25064483 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcata 25064424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 7976038 - 7976100
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||  |||||| ||||| ||| ||||||||||||| ||| ||||||||||||||||||    
T  7976038 gctaaaaacataaaggatgaatatgcgaacaaactcacaacacctaagttaatagcatacaac 7976100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 145
Target Start/End: Complemental strand, 9380260 - 9380190
Alignment:
Q  75 taaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||| ||||||| ||| ||||||||||||| | ||||| |||||| ||||||| || ||||||    
T  9380260 taaaaatgtaaatggtgaatatgcgaacaaactcacaacatccaagataatagaatacaacgacaaaatgc 9380190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 33740409 - 33740467
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||| ||||||| ||||| ||| |||||||||||| || ||||||||||||||||    
T  33740409 gctaaaaacgtaaaggatgaatctgcgaacaaactcacattatccaagttaatagcata 33740467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 35001840 - 35001778
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||| | ||| ||| ||||||||||||| | ||||||||||||||||    
T  35001840 catcgctaaaaacgtaaaggattaatctgcgaacaaactcacaacatccaagttaatagcata 35001778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 5390101 - 5390150
Alignment:
Q  233 tgtttaaggtggattttgaaaaggcctatgactctgttgactggggttat 282  Q
    |||||||||||||||||||||| || ||||| |||||||| |||||||||    
T  5390101 tgtttaaggtggattttgaaaaagcttatgattctgttgattggggttat 5390150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 17604921 - 17604982
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    ||||||||| | ||||||||||| ||||||||||||||||  |||||||| ||||| |||||    
T  17604921 aagaaagatatgttgttgtttaaagtggattttgaaaaggtgtatgactcagttgattgggg 17604982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 18589872 - 18589815
Alignment:
Q  233 tgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattc 290  Q
    |||||||||| |||||||||||||| || ||||| ||||| ||||||||| |||||||    
T  18589872 tgtttaaggttgattttgaaaaggcgtacgactcagttgattggggttatctggattc 18589815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 25351758 - 25351705
Alignment:
Q  235 tttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggat 288  Q
    ||||| || |||||||||||||| |||||||||||||| ||||| |||||||||    
T  25351758 tttaaagttgattttgaaaaggcttatgactctgttgattggggatatttggat 25351705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 10228923 - 10228867
Alignment:
Q  75 taaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||| ||||||| ||||||||| |||||||| ||| || ||||||||||||||||    
T  10228923 taaaaacgtaaaggatgaatttgcgaacaaacttacagtatccaagttaatagcata 10228867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 31297063 - 31296987
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||| ||||||||||||  ||| |||||||||| |  | |||| ||||||||||||||| || ||||||    
T  31297063 catcgctaaaaacgtaaagggtgaaaatgcgaacaaactcaaatcatccaaattaatagcatacaacgacaaaatgc 31296987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 32060117 - 32060057
Alignment:
Q  71 tcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||||||||||| ||| ||| |||||||| |||| | |||| |||||||||||    
T  32060117 tcgctaaaaatgtaaagggtaaatctgcgaacaaacttacaacatccaatttaatagcata 32060057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 8027948 - 8028007
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||||||| ||||||||||||  | | ||||||||||||||    
T  8027948 cgctaaaaacgtaaaggatgaatttgcgaacaaactcacatcatcaaagttaatagcata 8028007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 8497215 - 8497156
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||||    
T  8497215 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcata 8497156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 12653191 - 12653132
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||| ||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  12653191 cgctaaaaacgtacaggatgaatctgcgaacaaactcacaacatccaagttaatagcata 12653132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 17237116 - 17237175
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| |||| |||||||| | ||||||||||||||||    
T  17237116 cgctaaaaacgtaaaggatgaatctgcgaacacactcacaacatccaagttaatagcata 17237175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 17335000 - 17334941
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||| | ||||| ||| ||||||||||||| | ||||||||||||||||    
T  17335000 cgctaaaaacgtaaatgatgaatctgcgaacaaactcacaacatccaagttaatagcata 17334941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 23947147 - 23947206
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| | | ||||||||||||| | ||||||||||||||||    
T  23947147 cgctaaaaacgtaaaggatgaatctacgaacaaactcacaacatccaagttaatagcata 23947206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 27097489 - 27097552
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatac 132  Q
    ||||| |||||| |||||  |||||||||  |||||| ||||||||| ||||||||||||||||    
T  27097489 catcgttaaaaacgtaaaatgtgaatttgtgaacaaagtcacaatactcaagttaatagcatac 27097552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 33110854 - 33110799
Alignment:
Q  76 aaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||| ||||||| ||||| |||||| |||||||||| | ||||||||||||||||    
T  33110854 aaaaacgtaaaggatgaatatgcaaataaactcacaacatccaagttaatagcata 33110799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 34018803 - 34018736
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    |||||||||||| ||||| ||| ||| |||| |||||||||||| ||||||| |||||  ||||||||    
T  34018803 catcgctaaaaacgtaaatggtaaatctgcagacaaactcacaacacccaagataataatatacaaca 34018736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 280
Target Start/End: Complemental strand, 34601652 - 34601589
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggtt 280  Q
    ||||| ||||||||  ||||||||||||| || |||||||| ||||||||| |||||| |||||    
T  34601652 aagaaggatcttttactgtttaaggtggacttcgaaaaggcatatgactctattgactagggtt 34601589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 280
Target Start/End: Complemental strand, 34628194 - 34628131
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggtt 280  Q
    ||||| ||||||||  ||||||||||||| || |||||||| ||||||||| |||||| |||||    
T  34628194 aagaaggatcttttactgtttaaggtggacttcgaaaaggcatatgactctattgactagggtt 34628131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 280
Target Start/End: Complemental strand, 34722928 - 34722865
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggtt 280  Q
    ||||| ||||||||  ||||||||||||| || |||||||| ||||||||| |||||| |||||    
T  34722928 aagaaggatcttttactgtttaaggtggacttcgaaaaggcatatgactctattgactagggtt 34722865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 1933540 - 1933606
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    |||| |||||| ||||||| ||||| ||| |||||||||| | |||| || ||||||||||||||||    
T  1933540 atcgttaaaaacgtaaaggatgaatctgcgaacaaactcatagtaccgaaattaatagcatacaaca 1933606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 14802070 - 14802004
Alignment:
Q  70 atcgctaaaaatgtaa-agggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| |||| || |||||| ||| ||||||||||||  | ||||||||||||||||||||    
T  14802070 atcgctaaaaacgtaatagagtgaatctgcgaacaaactcacagcatccaagttaatagcatacaac 14802004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 278
Target Start/End: Original strand, 18681162 - 18681224
Alignment:
Q  216 gaagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    ||||||||| |||||||||||||| ||||| ||||||||| | ||||| || ||||| |||||    
T  18681162 gaagaaagagcttttgttgtttaaagtggactttgaaaagacatatgattccgttgaatgggg 18681224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 28634940 - 28635002
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||| ||||| ||  ||||||||||||| | |||||||||| |||||    
T  28634940 catcgctaaaaacgtaaaggatgaatctgtgaacaaactcacaacatccaagttaatcgcata 28635002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 2555157 - 2555120
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaa 254  Q
    |||||||||||||||||||| || ||||||||||||||    
T  2555157 aagaaagatcttttgttgttcaaagtggattttgaaaa 2555120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 6957384 - 6957335
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaataccca 118  Q
    |||||||||||| ||||||||||||| ||  ||||||||||||| |||||    
T  6957384 catcgctaaaaacgtaaagggtgaatctgtgaacaaactcacaacaccca 6957335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 5e-53; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 214 - 351
Target Start/End: Original strand, 10709869 - 10710006
Alignment:
Q  214 ctgaagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttc 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || |||| ||||||||||||||||||| | |||||||||||||    
T  10709869 ctgaagaaagatcttttgttgtttaaggtggattttgaaaaggcttatcactctgtcgattgggcttatttggattctgttctaggtcgtatgtcttttc 10709968  T
Q  314 cggttctgtggagaaagtggattaaagagtgtgttagt 351  Q
     |||||||||||||||||||||||||||||||||||||    
T  10709969 tggttctgtggagaaagtggattaaagagtgtgttagt 10710006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 215 - 351
Target Start/End: Complemental strand, 26722156 - 26722020
Alignment:
Q  215 tgaagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttcc 314  Q
    ||||||||||| |  |||||||||||||||||||  ||||||||||||||||| |||| ||||| ||||||||||||||| |  | ||||||||||||||    
T  26722156 tgaagaaagatttgatgttgtttaaggtggatttcaaaaaggcctatgactctattgattggggctatttggattctgttttggggcgtatgtcttttcc 26722057  T
Q  315 ggttctgtggagaaagtggattaaagagtgtgttagt 351  Q
    ||||||||||| |||||||||||||||||||||||||    
T  26722056 ggttctgtggaaaaagtggattaaagagtgtgttagt 26722020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 35484238 - 35484304
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||| ||||||||||||||||||||||    
T  35484238 catcgctaaaaatgtaaagggcgaatctgcgaacaaactcacaacacccaagttaatagcatacaac 35484304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 32351902 - 32352029
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccggttc 319  Q
    ||||| ||| |||||||||||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| |  |  | ||||||||||| ||||    
T  32351902 aaagagcttatgttgtttaaggtggattttgagaaggcttatgattcggtggactggggttacttagattctgttatggggtgcatgtcttttcctgttc 32352001  T
Q  320 tgtggagaaagtggattaaagagtgtgt 347  Q
    | |||||||| ||||| ||||| |||||    
T  32352002 tctggagaaaatggatcaaagaatgtgt 32352029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 220 - 350
Target Start/End: Complemental strand, 5498564 - 5498434
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccggttc 319  Q
    ||||| ||| |||||||||||||||| ||||||||||| ||||| | ||| |||| ||||||||| ||||||||| |  |  | ||||||||||| ||||    
T  5498564 aaagagcttatgttgtttaaggtggactttgaaaaggcatatgattttgtagactagggttatttagattctgttatgggttgcatgtcttttcctgttc 5498465  T
Q  320 tgtggagaaagtggattaaagagtgtgttag 350  Q
    | ||||| || ||||| ||||| ||||||||    
T  5498464 tttggaggaaatggatcaaagaatgtgttag 5498434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 14489517 - 14489443
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaat 143  Q
    |||||||||||| ||||||||||||| ||| || |||||| ||||||||||||||||| ||||||||||| ||||    
T  14489517 catcgctaaaaacgtaaagggtgaatatgctaataaactctcaatacccaagttaataacatacaacaacaaaat 14489443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 24583390 - 24583325
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  24583390 atcgctaaaaatgtaaaggatgaatctgcgaacaaactcacatcacccaagttaatagcatacaac 24583325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 48217687 - 48217622
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaac 138  Q
    |||||||||||||||| ||||||||| ||||||||||||| | |||||||||||||||| ||||||    
T  48217687 gctaaaaatgtaaaggatgaatttgcgaacaaactcacaacatccaagttaatagcatataacaac 48217622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 48750429 - 48750364
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| ||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  48750429 atcgctaaaaacgtatagggtgaatatgcgaacaaactcacaacacccaagttaatagcatacaac 48750364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 7337510 - 7337586
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||| | ||||||||||||||| ||||| | ||||||    
T  7337510 catcgctaaaaatataaagggtgaatctgcgaacaaactcacaacagccaagttaatagcatgcaacagcaaaatgc 7337586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 10776308 - 10776384
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||| |||||||||||| |||| ||||||||||||  |||||||||||||| |||||||| | ||||||    
T  10776308 catcgctaaaaacgtaaagggtgaaattgcgaacaaactcacagcacccaagttaatagaatacaacagcaaaatgc 10776384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 51373705 - 51373781
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||| |||||| ||||||||||||| | ||||||||||||||| ||||||||||||||||||| || || ||||||    
T  51373705 catcgataaaaacgtaaagggtgaatctccaaacaaactcacaacacccaagttaatagcatacgacgacaaaatgc 51373781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 27456729 - 27456654
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatg 144  Q
    ||||| |||||| ||||| | ||||||||| ||||||||||||| |||||||||||||||||||||| || |||||    
T  27456729 catcgttaaaaacgtaaaagatgaatttgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatg 27456654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 13144659 - 13144721
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||||    
T  13144659 catcgttaaaaatgtaaagggtgaatctgcgaacaaactcacaacatccaagttaatagcata 13144721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 49504442 - 49504508
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||| |||||| ||||||||||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  49504442 catcgttaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaac 49504508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 34412940 - 34413005
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| ||||||||| ||| ||||||||||||| ||||||||||||| ||||||||    
T  34412940 atcgctaaaaacgtatagggtgaatctgcgaacaaactcacaacacccaagttaataacatacaac 34413005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 36775558 - 36775623
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| ||||||||| ||| ||||||||||||| | ||||||||||||||||||||    
T  36775558 atcgctaaaaacgtatagggtgaatctgcgaacaaactcacaacatccaagttaatagcatacaac 36775623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 37720004 - 37720057
Alignment:
Q  77 aaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcat 130  Q
    |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  37720004 aaaacgtaaaaggtgaatttgcaaacaaactcacaacacccaagttaatagcat 37720057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 45789785 - 45789721
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    |||||||||||||||||||||||| ||||  ||||||| ||||| |||||||||||||||||||||    
T  45789785 catcgctaaaaatgtaaagggtgattttgagaacaaac-cacaacacccaagttaatagcatacaa 45789721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 49627157 - 49627092
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||||||| ||||| ||| ||||||||||||| |||||| |||||||||||||||    
T  49627157 atcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacacccaaattaatagcatacaac 49627092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 31984400 - 31984324
Alignment:
Q  75 taaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgctaaaaa 151  Q
    |||||| ||||||||| ||| ||| |||||| |||||| |||||||||||||||||||||| || ||||||| ||||    
T  31984400 taaaaacgtaaagggtaaatctgcgaacaaagtcacaacacccaagttaatagcatacaacgacaaaatgcttaaaa 31984324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 281
Target Start/End: Complemental strand, 39431839 - 39431775
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggtta 281  Q
    ||||| |||||  |||||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  39431839 aagaaggatctcatgttgtttaaagtggattttgaaaaggcttatgactctgttgattggggtta 39431775  T

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Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 5984067 - 5984005
Alignment:
Q  83 taaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||| ||| ||||||||||||  |||||||||||||||||||||| || ||||||    
T  5984067 taaagggtgaatatgcgaacaaactcacatcacccaagttaatagcatacaacgacaaaatgc 5984005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 11462329 - 11462395
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||| ||||||| | | ||||||||||||  ||||||||||||||||||||||    
T  11462329 catcgctaaaaacgtaaatggtgaatctacgaacaaactcacagcacccaagttaatagcatacaac 11462395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 29738511 - 29738577
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||| ||||||| ||||||||||||| ||| ||| ||||||||  ||||||||||||||||||||||    
T  29738511 catcactaaaaacgtaaagggtgaatctgcgaacgaactcacagcacccaagttaatagcatacaac 29738577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 31317981 - 31317923
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatag 127  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||  ||||||||||||||    
T  31317981 catcgttaaaaacgtaaagggtgaatttgcgaacaaactcacatcacccaagttaatag 31317923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 34878125 - 34878187
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||| ||||||| ||  ||||||||||||| ||||||||||||||||||    
T  34878125 catcgctaaaaacgtaaaaggtgaatctgtgaacaaactcacaacacccaagttaatagcata 34878187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 31919232 - 31919159
Alignment:
Q  71 tcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatg 144  Q
    |||||||||| ||||||| ||||| ||| ||||||||| ||| | |||||||||||||||||||| || |||||    
T  31919232 tcgctaaaaacgtaaaggatgaatctgcgaacaaactcgcaacatccaagttaatagcatacaacgacaaaatg 31919159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 44543516 - 44543455
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||| ||||||| ||||| ||| ||||||||||||  ||||||||||||||||||    
T  44543516 atcgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcacccaagttaatagcata 44543455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 45415802 - 45415737
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||| |||||| ||||||  |||||||    
T  45415802 atcgctaaaaacgtaaagggtgaatatgcgaacaaactcacaacacccaaattaatattatacaac 45415737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 27579989 - 27580037
Alignment:
Q  83 taaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||||||||    
T  27579989 taaagggtgaatctgcgaacaaactcacaacacccaagttaatagcata 27580037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 5701510 - 5701451
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  5701510 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcata 5701451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 11454188 - 11454129
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  11454188 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcata 11454129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 31837085 - 31837026
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||||||||| | ||| ||| |||||||||||| || ||||||||||||||||    
T  31837085 cgctaaaaatgtaaaggataaatctgcgaacaaactcacagtatccaagttaatagcata 31837026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 15431517 - 15431579
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||| ||||||| ||||| ||| ||||||||||||| | |||||| |||||||||||||    
T  15431517 gctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtgaatagcatacaac 15431579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 16162066 - 16162012
Alignment:
Q  76 aaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcat 130  Q
    ||||| ||||||||||||| ||| ||||||||||||| ||| |||||||||||||    
T  16162066 aaaaacgtaaagggtgaatctgcgaacaaactcacaacacctaagttaatagcat 16162012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 16989616 - 16989554
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||| ||||||| ||||| ||| ||| ||||||||||||||||  ||||||||||||||||||    
T  16989616 catcactaaaaacgtaaatggtaaatctgcaaacaaactcacagcacccaagttaatagcata 16989554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 21687623 - 21687561
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||| ||| ||||| ||||||| ||| ||||||||||||| |||||| |||||||||||    
T  21687623 catcgctagaaacgtaaaaggtgaatctgctaacaaactcacaacacccaaattaatagcata 21687561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 35461901 - 35461959
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatag 127  Q
    |||| ||||||||||||||||||||| ||| || |||||||||  ||||||||||||||    
T  35461901 catcactaaaaatgtaaagggtgaatctgcgaataaactcacagcacccaagttaatag 35461959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 38520362 - 38520424
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||| ||||||| ||||||| ||||||||  ||||||||||||| | ||||||||||||||||    
T  38520362 catcactaaaaacgtaaaggatgaatttgtgaacaaactcacaacatccaagttaatagcata 38520424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 47133148 - 47133086
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||| | ||| ||| ||||||||||||| | ||||||||||||||||    
T  47133148 catcgctaaaaacgtaaaggataaatctgcgaacaaactcacaacatccaagttaatagcata 47133086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 50148624 - 50148562
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||||||||||| ||||| ||| ||  ||||||||| | ||||||||||||||||    
T  50148624 catcgctaaaaatgtaaaggatgaatctgcgaaacaactcacaacatccaagttaatagcata 50148562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 51916522 - 51916576
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagtta 123  Q
    |||||||||||||||||| | ||||||||  ||||||||||||| ||||||||||    
T  51916522 catcgctaaaaatgtaaatgatgaatttgggaacaaactcacaacacccaagtta 51916576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 14872871 - 14872818
Alignment:
Q  82 gtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||||| ||| ||||||||||||  | ||||||||||||||||||||    
T  14872871 gtaaagggtgaatatgcgaacaaactcacagcatccaagttaatagcatacaac 14872818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 19061153 - 19061088
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||  |||| | ||||| ||| ||||||||||||| | ||||||||||||||||||||    
T  19061153 atcgctaaaaacataaaagatgaatgtgcgaacaaactcacaacatccaagttaatagcatacaac 19061088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 21947466 - 21947531
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||| |||||||||||||||| ||| ||| ||||||||||||  |||||||||||||  |||||||    
T  21947466 atcgttaaaaatgtaaagggtaaatctgcgaacaaactcacatcacccaagttaataaaatacaac 21947531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 24583194 - 24583129
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||||||| ||||| ||  ||||||||||||  ||||||||||||| ||||||||    
T  24583194 atcgctaaaaacgtaaaggatgaatctgtgaacaaactcacatcacccaagttaatatcatacaac 24583129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 7342973 - 7342909
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | |||||||||||||||| ||||    
T  7342973 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataaca 7342909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 12635415 - 12635339
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||||  |||| ||||||| | | |||||||| |||| | |||||||||||||||||||| || ||||||    
T  12635415 catcgctaaaaacataaaaggtgaatctccgaacaaactaacaacatccaagttaatagcatacaacgacaaaatgc 12635339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 20797197 - 20797149
Alignment:
Q  233 tgtttaaggtggattttgaaaaggcctatgactctgttgactggggtta 281  Q
    ||||||| ||||||||||||||||| || ||||||||||| ||||||||    
T  20797197 tgtttaaagtggattttgaaaaggcttacgactctgttgattggggtta 20797149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 7998040 - 7997981
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||||||||||||||||  | ||||||||||| ||||    
T  7998040 cgctaaaaacgtaaaggatgaatctgcaaacaaactcacatcatccaagttaataacata 7997981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 9687035 - 9687094
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||||    
T  9687035 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcata 9687094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 9919639 - 9919580
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||||||||| | ||| ||| ||||||||||||  | ||||||||||||||||    
T  9919639 cgctaaaaatgtaaaggataaatctgcgaacaaactcacagcatccaagttaatagcata 9919580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 50165929 - 50165988
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||  ||||||||||||| | ||||||||||||||||    
T  50165929 cgctaaaaacgtaaaggatgaatctgtgaacaaactcacaacatccaagttaatagcata 50165988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 50377568 - 50377505
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatac 132  Q
    |||||||||||| ||||||| |||| |||| ||||||||| ||  ||||||||||||| |||||    
T  50377568 catcgctaaaaacgtaaaggatgaaattgcgaacaaactctcagcacccaagttaataacatac 50377505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 51868475 - 51868534
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||||||| ||||||||||||  | ||||||||||| ||||    
T  51868475 cgctaaaaacgtaaaggatgaatttgcgaacaaactcacagcatccaagttaataacata 51868534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 51872114 - 51872055
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||||    
T  51872114 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcata 51872055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 8211154 - 8211216
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| |||||| |||||| | | ||||||||||||| | || |||||||||||||    
T  8211154 catcgctaaaaacgtaaagcgtgaatctacgaacaaactcacaacatccgagttaatagcata 8211216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 22190372 - 22190434
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttat 282  Q
    ||||| ||| |||| |||||||| |||||||||||||| || ||||||||||| ||| |||||    
T  22190372 aaagagcttatgttatttaaggttgattttgaaaaggcttacgactctgttgattggtgttat 22190434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 25503583 - 25503656
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgtt 294  Q
    ||||| ||| |||| ||||| || |||||||||||||| ||||||||  |||| ||||| |||||||||||||||    
T  25503583 aaagaacttatgttatttaaagttgattttgaaaaggcgtatgactcgattgattgggg-tatttggattctgtt 25503656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 31130420 - 31130478
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatag 127  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||  | ||||||||||||    
T  31130420 catcgctaaaaatgtaaaggatgaatatgtgaacaaactcacagcatccaagttaatag 31130478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 44915884 - 44915818
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||| ||||||| ||||||| ||||| ||| ||||||||||||  ||||||||  ||||||||||||    
T  44915884 catcactaaaaacgtaaaggatgaatatgcgaacaaactcacatcacccaagtcgatagcatacaac 44915818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 3543700 - 3543733
Alignment:
Q  230 tgttgtttaaggtggattttgaaaaggcctatga 263  Q
    |||||||||||||||||||||||||||| |||||    
T  3543700 tgttgtttaaggtggattttgaaaaggcgtatga 3543733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 9172741 - 9172684
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagca 129  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||    
T  9172741 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagca 9172684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 9180723 - 9180666
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagca 129  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||    
T  9180723 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagca 9180666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 18939552 - 18939499
Alignment:
Q  82 gtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||| ||||||| ||| |||||||||| | || ||||||||||||||||||||    
T  18939552 gtaaatggtgaatctgcgaacaaactcaaattatccaagttaatagcatacaac 18939499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 26997598 - 26997553
Alignment:
Q  233 tgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    |||||||||||| |||||| |||||||| ||||||||||| |||||    
T  26997598 tgtttaaggtgggttttgagaaggcctacgactctgttgattgggg 26997553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 34519379 - 34519322
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagca 129  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||    
T  34519379 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaggatccaagttaatagca 34519322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 35542587 - 35542526
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    |||||||| ||| ||||||| || ||||||||||||||||| | ||| |||||||| |||||    
T  35542587 aagaaagaacttctgttgttcaaagtggattttgaaaaggcgtttgattctgttgattgggg 35542526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 1742532 - 1742476
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaat 125  Q
    |||||||||||| ||||||||||||| ||  || |||||||||  ||||||||||||    
T  1742532 catcgctaaaaacgtaaagggtgaatctgtgaataaactcacatcacccaagttaat 1742476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 4413359 - 4413283
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||| ||||||| ||||| ||  |||||| |||||  || ||| |||||||||||||||| | ||||||    
T  4413359 catcgctaaaaacgtaaaggatgaatctgtgaacaaattcacagcactcaatttaatagcatacaacagcaaaatgc 4413283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 7836657 - 7836705
Alignment:
Q  83 taaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||| ||||| ||| ||||||||||||  ||||||||||||||||||    
T  7836657 taaaggatgaatctgcgaacaaactcacagcacccaagttaatagcata 7836705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 13075504 - 13075567
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    ||||||||||| ||||||||||||| ||| || || ||||||| |||||| || |||||||||||    
T  13075504 atcgctaaaaaagtaaagggtgaatctgcgaaaaatctcacaaaacccaa-tttatagcatacaa 13075567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 19715725 - 19715789
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    ||||||||| ||||||| ||||| ||| || |||||||||  | |||||||||||||||| ||||    
T  19715725 cgctaaaaacgtaaaggatgaatctgcgaataaactcacagcatccaagttaatagcatataaca 19715789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 26535550 - 26535514
Alignment:
Q  100 aacaaactcacaatacccaagttaatagcatacaaca 136  Q
    ||||||||||||| || ||||||||||||||||||||    
T  26535550 aacaaactcacaacactcaagttaatagcatacaaca 26535514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 32643409 - 32643357
Alignment:
Q  232 ttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttattt 284  Q
    ||||||||||| ||||||||||| || ||||| || ||||| |||||||||||    
T  32643409 ttgtttaaggttgattttgaaaaagcgtatgattcagttgattggggttattt 32643357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 34529311 - 34529251
Alignment:
Q  77 aaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaa 137  Q
    |||| ||||||  ||||| ||| ||||||||||||  |||||||||||||| |||||||||    
T  34529311 aaaacgtaaagattgaatctgcgaacaaactcacatcacccaagttaatagtatacaacaa 34529251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 40880843 - 40880907
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    ||||||||| ||||| | || || ||| ||||||||||||| | |||||||||||||||| ||||    
T  40880843 cgctaaaaacgtaaatgatgcatctgcgaacaaactcacaacatccaagttaatagcatataaca 40880907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 41805330 - 41805370
Alignment:
Q  229 ttgttgtttaaggtggattttgaaaaggcctatgactctgt 269  Q
    |||||||||||||| ||||||||||| || |||||||||||    
T  41805330 ttgttgtttaaggtagattttgaaaaagcatatgactctgt 41805370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 215 - 349
Target Start/End: Original strand, 45254425 - 45254559
Alignment:
Q  215 tgaagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttcc 314  Q
    |||||||||| ||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||    
T  45254425 tgaagaaagaccttctgttgtttaaggtggattttgaaaaggcttatgactctgtcgactggggttatttggattctgttttgggccgtatgtcttttcc 45254524  T
Q  315 ggttctgtggagaaagtggattaaagagtgtgtta 349  Q
    ||||||| |||||||||||||||||||||||||||    
T  45254525 ggttctgcggagaaagtggattaaagagtgtgtta 45254559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 217 - 350
Target Start/End: Complemental strand, 17660394 - 17660261
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccgg 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| |  | || |||||||||||||    
T  17660394 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgattctgtcgattggggttatttggattctgttatgggtcgcatgtcttttccgg 17660295  T
Q  317 ttctgtggagaaagtggattaaagagtgtgttag 350  Q
    | || ||||||||||||||||||| |||||||||    
T  17660294 tcctatggagaaagtggattaaagtgtgtgttag 17660261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 217 - 336
Target Start/End: Complemental strand, 36158706 - 36158587
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccgg 316  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| |||||  |  | ||||||||||| ||||    
T  36158706 aagaaagatcttatgttgtttaaggtggattttgaaaaggcttatgactctgttgattggggttatctggactctgtgttgggtcgtatgtctttcccgg 36158607  T
Q  317 ttctgtggagaaagtggatt 336  Q
     ||| |||||||||||||||    
T  36158606 ctctttggagaaagtggatt 36158587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 16928602 - 16928667
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  16928602 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaa 16928667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 23230887 - 23230811
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||| |||||| ||||||| ||| ||||||||||||| |||||||||||||||||||||| || ||||||    
T  23230887 catcgctaaaagtgtaaatggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgc 23230811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 37971521 - 37971461
Alignment:
Q  75 taaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  37971521 taaaaatgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaac 37971461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 8412367 - 8412429
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||||  |||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  8412367 catcgctaaaaacataaagggtgaatctgcaaacaaactcacaacacccaagttaatagcata 8412429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 30568166 - 30568228
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||||    
T  30568166 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcata 30568228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 31013457 - 31013519
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  31013457 gctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaac 31013519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 43833842 - 43833907
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  43833842 atcgctaaaaaagtaaatggtgaatctgcaaacaaactcacagcacccaagttaatagcatacaac 43833907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 41896757 - 41896685
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||| ||| ||||||||| ||| ||||||||||||| |||||||||||||||||||||| || ||||||    
T  41896757 gctaaaaacgtatagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgc 41896685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 15344551 - 15344476
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||| ||||||| ||||| ||| ||||||||||||  |||||||||||||||||||||| || ||||||    
T  15344551 atcgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcacccaagttaatagcatacaacgacaaaatgc 15344476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 15433616 - 15433541
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||| ||||||| ||||| ||| ||||||||||||  |||||||||||||||||||||| || ||||||    
T  15433616 atcgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcacccaagttaatagcatacaacgacaaaatgc 15433541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 15524920 - 15524845
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||| ||||||| ||||| ||| ||||||||||||  |||||||||||||||||||||| || ||||||    
T  15524920 atcgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcacccaagttaatagcatacaacgacaaaatgc 15524845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 16374693 - 16374820
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccggttc 319  Q
    ||||| ||| |||||||||||||||| ||||||||| | ||||| || || || |||||||| || ||||||||| |  | || ||||||||||| ||||    
T  16374693 aaagagcttatgttgtttaaggtggactttgaaaagacttatgattcggtggattggggttacttagattctgttatgggtcgcatgtcttttcctgttc 16374792  T
Q  320 tgtggagaaagtggattaaagagtgtgt 347  Q
    | |||||||| |||||||| || |||||    
T  16374793 tttggagaaaatggattaatgaatgtgt 16374820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 4986655 - 4986729
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgtt 294  Q
    ||||| ||| |||||||||| ||||||||||||||||| ||||||||  |||| ||||| |||||||||||||||    
T  4986655 aaagaacttatgttgtttaaagtggattttgaaaaggcttatgactcgattgattgggggtatttggattctgtt 4986729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 7883086 - 7883152
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||  |||||||||||||| |||||||    
T  7883086 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaagttaataggatacaac 7883152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 24099101 - 24099163
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||| | ||||||||||||||||    
T  24099101 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacatccaagttaatagcata 24099163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 42046464 - 42046402
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatac 132  Q
    ||||||||||| ||| ||||||||| ||| ||||||||||||| |||||||||||||||||||    
T  42046464 atcgctaaaaacgtatagggtgaatctgcgaacaaactcacaacacccaagttaatagcatac 42046402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 7198041 - 7198106
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||||||||||||| ||| || |||||||||| |||||| |||||||||||||||    
T  7198041 atcgctaaaaacgtaaagggtgaatctgcgaataaactcacaacacccaaattaatagcatacaac 7198106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 14585920 - 14585855
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| ||||||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  14585920 atcgctaaaaacgtatagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaac 14585855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 20825853 - 20825792
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    ||||||||||| ||||||||||| ||||||||||| ||||| |||||||| |||||||||||    
T  20825853 aagaaagatctgttgttgtttaaagtggattttgagaaggcgtatgactcagttgactgggg 20825792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 45445656 - 45445732
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||| |||||| ||||| ||||||| ||| ||||||||||||| | |||||||||||||||| |||||| ||||||    
T  45445656 catcgttaaaaacgtaaaaggtgaatatgcgaacaaactcacaacatccaagttaatagcataaaacaacaaaatgc 45445732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 145
Target Start/End: Original strand, 18890545 - 18890620
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||| | | ||||||||| ||| ||||||||||||  |||||||||||||||||||||| || ||||||    
T  18890545 atcgctaaaaacggatagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaacgacaaaatgc 18890620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 1236546 - 1236608
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||| ||||||| ||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  1236546 gctaaaaacgtaaaggatgaatctgcgaacaaactcacagcacccaagttaatagcatacaac 1236608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 13878086 - 13878144
Alignment:
Q  229 ttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttgga 287  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| ||||| || |||||    
T  13878086 ttgttgtttaaagtggattttgaaaaggcgtatgactctgttgattgggggtacttgga 13878144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 21238032 - 21237966
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||  ||||||||||||| ||||| |||||||| |||||||    
T  21238032 catcgctaaaaacgtaaagggtgaatctgtgaacaaactcacaacacccatgttaataggatacaac 21237966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 27110310 - 27110376
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||| ||||||||| ||| | ||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  27110310 catcactaaaaatgcaaaagatgaatatgcgaacaaactcacaacacccaagttaatagcatacaac 27110376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 17693458 - 17693527
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaac 138  Q
    ||||||||||||||||||| |||||| | | | ||||||||||| | ||||||||||| |||||||||||    
T  17693458 catcgctaaaaatgtaaagagtgaatctacgaccaaactcacaacatccaagttaataacatacaacaac 17693527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 41663955 - 41664016
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    |||||||||||||||||||| || || |||||||||||||| ||||| |||||||| |||||    
T  41663955 aagaaagatcttttgttgttcaaagtagattttgaaaaggcgtatgattctgttgattgggg 41664016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 33896340 - 33896276
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    ||||||||||||||||| ||||| ||| || |||||||||| | |||||||||||||||| ||||    
T  33896340 cgctaaaaatgtaaaggatgaatctgcgaaaaaactcacaacatccaagttaatagcatataaca 33896276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 3673682 - 3673619
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||| ||||||||||||  ||||||||||||||||  | |||||||||||| |||||||    
T  3673682 cgctaaaaacgtaaagggtgaaactgcaaacaaactcacagcatccaagttaataggatacaac 3673619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 41060108 - 41060183
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatg 144  Q
    |||| ||||||| ||||||| ||||| ||| ||||||||||||  |||||| || ||||||||||||||| |||||    
T  41060108 catcactaaaaacgtaaaggatgaatctgcgaacaaactcacatcacccaaattgatagcatacaacaacaaaatg 41060183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 44099766 - 44099825
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  44099766 cgctaaaaacgtaaaggatgaatctgctaacaaactcacaacatccaagttaatagcata 44099825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 14544740 - 14544806
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| |||| || ||||| ||||||||||||||||  | |||||||||||||| |||||    
T  14544740 catcgctaaaaacgtaatggatgaatctgcaaacaaactcacaccatccaagttaatagcaaacaac 14544806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 14906753 - 14906819
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaac 138  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | |||||||||||||||| ||||||    
T  14906753 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaggatccaagttaatagcatataacaac 14906819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 37565711 - 37565773
Alignment:
Q  74 ctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    ||||||| ||||||| ||||||||| ||||||||||||  | |||||||||||||||| ||||    
T  37565711 ctaaaaacgtaaaggatgaatttgcgaacaaactcacagcatccaagttaatagcatataaca 37565773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 10377932 - 10377867
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| || || ||||||| ||| | ||||||||||  ||||||||||||||||||||||    
T  10377932 atcgctaaaaacgtgaatggtgaatctgcgagcaaactcacagcacccaagttaatagcatacaac 10377867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 33347366 - 33347431
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    |||||||||||| ||||| ||||||| ||| |||||||||| || ||| || ||||||||||||||    
T  33347366 catcgctaaaaaggtaaaaggtgaatctgcgaacaaactcataacacctaatttaatagcatacaa 33347431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 2656124 - 2656060
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    ||||||||| ||||| | ||||||||| ||||||||||||  | |||||||||||||||| ||||    
T  2656124 cgctaaaaacgtaaatgatgaatttgcgaacaaactcacagcatccaagttaatagcatataaca 2656060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 9637254 - 9637330
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||| ||||||| ||||| ||||||  | | |||||||||| || |||||||||||||||||||||| || ||||||    
T  9637254 catcactaaaaacgtaaatggtgaaactacgaacaaactcataacacccaagttaatagcatacaacgacaaaatgc 9637330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 17019489 - 17019429
Alignment:
Q  71 tcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||| | ||||| ||||||||| ||||||||||||| | ||| ||||||||||||    
T  17019489 tcgctaaaaacgaaaaggatgaatttgcgaacaaactcacaacatccatgttaatagcata 17019429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 17549926 - 17549866
Alignment:
Q  71 tcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||| | ||||| ||||||||| ||||||||||||| | ||| ||||||||||||    
T  17549926 tcgctaaaaacgaaaaggatgaatttgcgaacaaactcacaacatccatgttaatagcata 17549866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 34612061 - 34611993
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaa 137  Q
    |||| ||||||| ||||||  ||||| ||| ||||||||||||| | |||||||||||||||| |||||    
T  34612061 catcactaaaaacgtaaagaatgaatctgcgaacaaactcacaacatccaagttaatagcatataacaa 34611993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 36948290 - 36948350
Alignment:
Q  76 aaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    |||||||||||| || | ||| | ||||||||||||| ||||||||||||||| |||||||    
T  36948290 aaaaatgtaaagagttagtttacgaacaaactcacaacacccaagttaatagcctacaaca 36948350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 41684617 - 41684561
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaat 125  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||   |||||||||||    
T  41684617 catcgctaaaaacgtaaagggtgaatatgcaaacaaacacacagctcccaagttaat 41684561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 4809218 - 4809159
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| | | ||||||||||||||    
T  4809218 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatctaagttaatagcata 4809159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 9619187 - 9619246
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||||    
T  9619187 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcata 9619246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 12333385 - 12333330
Alignment:
Q  233 tgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggat 288  Q
    |||||||||||||||| ||||| || ||||| || ||||||||||| |||||||||    
T  12333385 tgtttaaggtggatttcgaaaaagcgtatgattcagttgactgggggtatttggat 12333330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 13575934 - 13576001
Alignment:
Q  71 tcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaac 138  Q
    ||||||||||   ||||| ||||||||| ||||||||||||| | ||| |||||||||||| ||||||    
T  13575934 tcgctaaaaacaaaaaggatgaatttgcgaacaaactcacaacatccatgttaatagcataaaacaac 13576001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 287
Target Start/End: Complemental strand, 25194613 - 25194570
Alignment:
Q  244 gattttgaaaaggcctatgactctgttgactggggttatttgga 287  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||    
T  25194613 gattttgaaaaggcttatgactctgttgattggggatatttgga 25194570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 29777473 - 29777414
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||||    
T  29777473 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcata 29777414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 7677128 - 7677194
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| |||||| |||||| ||  |||||| |||||  ||||||||||||| ||||||||    
T  7677128 catcgctaaaaacgtaaagagtgaatctgtgaacaaagtcacagcacccaagttaataacatacaac 7677194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 8868048 - 8867998
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagtta 123  Q
    |||||||| ||||| ||||||||||| ||||||||||||  ||||||||||    
T  8868048 gctaaaaacgtaaaaggtgaatttgcgaacaaactcacaccacccaagtta 8867998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 25190914 - 25190972
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||  ||||| ||||||| ||| ||||||||||||  ||||||||||||||||||    
T  25190914 gctaaaatcgtaaaaggtgaatctgcgaacaaactcacagcacccaagttaatagcata 25190972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 29617133 - 29617195
Alignment:
Q  83 taaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||| |||| ||| ||||||||||||| |   ||||||||||||||||||||| ||||||    
T  29617133 taaagggcgaatctgcgaacaaactcacaacatttaagttaatagcatacaacaacaaaatgc 29617195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 43889955 - 43890013
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||| ||||||| ||||| |||||||||| |||||  | ||||||||||||||||    
T  43889955 gctaaaaacgtaaaggatgaatctgcaaacaaaatcacagcatccaagttaatagcata 43890013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 8301356 - 8301295
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    |||||||| ||| ||||||| || ||||||||||||||||| | ||| |||||||| |||||    
T  8301356 aagaaagaacttctgttgttcaaagtggattttgaaaaggcgtttgattctgttgattgggg 8301295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 20492331 - 20492270
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    |||||||| ||| ||||||| || ||||||||||||||||| | ||| |||||||| |||||    
T  20492331 aagaaagaacttctgttgttcaaagtggattttgaaaaggcgtttgattctgttgattgggg 20492270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 10800264 - 10800312
Alignment:
Q  233 tgtttaaggtggattttgaaaaggcctatgactctgttgactggggtta 281  Q
    ||||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  10800264 tgtttaaagtggattttgaaaaagcttatgattctgttgattggggtta 10800312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 33214518 - 33214578
Alignment:
Q  71 tcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||| ||||||||||||| | | |||||||| |||  ||| ||||||||||||||    
T  33214518 tcgctaaaaacgtaaagggtgaatctacgaacaaactaacagcaccaaagttaatagcata 33214578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 34493246 - 34493170
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||||   ||||||||||| | | ||||||||||||| || |||||||||| ||| |||| || ||||||    
T  34493246 catcgctaaaaacaaaaagggtgaatctacgaacaaactcacaaaactcaagttaataacatgcaacgacaaaatgc 34493170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 1e-50; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 214 - 351
Target Start/End: Complemental strand, 34233257 - 34233120
Alignment:
Q  214 ctgaagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttc 313  Q
    |||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||||||||||| |    
T  34233257 ctgaagaaagatcttttgatgttcaaggtggattttgaaaaagcctatgactctgtcgactggggttatttggattctgttctggggcgtatgtctttcc 34233158  T
Q  314 cggttctgtggagaaagtggattaaagagtgtgttagt 351  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  34233157 cggttctgtggaggaagtggattaaagagtgtgttagt 34233120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 215 - 345
Target Start/End: Complemental strand, 4078828 - 4078698
Alignment:
Q  215 tgaagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttcc 314  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||||||| |||||||||||||  |  |||||||||||||    
T  4078828 tgaagaaagatcttttgttgttcaaggtggatttcgaaaaggcttatgactctgtcgattggggttatctggattctgttctgggtggtatgtcttttcc 4078729  T
Q  315 ggttctgtggagaaagtggattaaagagtgt 345  Q
    |||||| |||||| |||||||||||||||||    
T  4078728 ggttctttggagagagtggattaaagagtgt 4078698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 13441608 - 13441481
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccggttc 319  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||| || || |||||||||||||| ||||||||| |  |  | ||||||||||| ||||    
T  13441608 aaagagcttatgttgtttaaggtggattttgaaaaggcttatgattcggtggactggggttatttagattctgttatggggtgcatgtcttttcctgttc 13441509  T
Q  320 tgtggagaaagtggattaaagagtgtgt 347  Q
    | |||||||| ||||| ||||| |||||    
T  13441508 tttggagaaaatggatcaaagaatgtgt 13441481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 40993401 - 40993325
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||| |||||||| || ||||||    
T  40993401 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaataacatacaacgacaaaatgc 40993325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 8001393 - 8001459
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  8001393 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaac 8001459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 34899454 - 34899520
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||| | ||||||||||||||||||||    
T  34899454 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacatccaagttaatagcatacaac 34899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 39171437 - 39171503
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| |||||||||||||| |  ||||||||||||||||||||||    
T  39171437 catcgctaaaaacgtaaagggtgaatctgcaaacaaactcatagcacccaagttaatagcatacaac 39171503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 42978854 - 42978788
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  42978854 catcgctaaaaacgtaaagggtgaatctgcgaacgaactcacaacacccaagttaatagcatacaac 42978788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 48930950 - 48930885
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  48930950 atcgctaaaaacgtataggttgaatctgcgaacaaactcacaatacccaagttaatagcatacaac 48930885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 48316659 - 48316735
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||||  |||||||||||| ||| ||||||||||||  |||||||||||||||||||||| || ||||||    
T  48316659 catcgctaaaaacctaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaacgacaaaatgc 48316735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 33795666 - 33795793
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccggttc 319  Q
    ||||| ||| |||||||||| | ||||||||||||||| ||||||||  |||| | |||||||||||| |||||| |   ||  |||||||| || ||||    
T  33795666 aaagaccttatgttgtttaaagcggattttgaaaaggcgtatgactcgattgatttgggttatttggactctgttttggcccaaatgtctttccctgttc 33795765  T
Q  320 tgtggagaaagtggattaaagagtgtgt 347  Q
    | |||||||| ||||||| |||||||||    
T  33795766 tttggagaaaatggattagagagtgtgt 33795793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 37837305 - 37837367
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||  ||||||||||||||||||    
T  37837305 catcgctaaaaacgtaaagggtgaatatgcgaacaaactcacagcacccaagttaatagcata 37837367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 45994126 - 45994052
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgtt 294  Q
    ||||| ||| |||||||||| ||||||||||||||||| ||||||||  |||| ||||| |||||||||||||||    
T  45994126 aaagaacttatgttgtttaaagtggattttgaaaaggcgtatgactcgattgattgggggtatttggattctgtt 45994052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 47590555 - 47590489
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||| |||| ||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||    
T  47590555 catcgctgaaaacgtaaagggtaaatctgcaaacaaactcacaacacccaagttaatagcttacaac 47590489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 48061666 - 48061600
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||| ||||||| ||||||||||||| ||| |||||||||| || ||||||||||||||||||||||    
T  48061666 catctctaaaaacgtaaagggtgaatctgcgaacaaactcataacacccaagttaatagcatacaac 48061600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 45349647 - 45349708
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||| ||||||||||||  ||| ||||||||||||| ||||||||||||||||||    
T  45349647 atcgctaaaaacgtaaagggtgaacctgcgaacaaactcacaacacccaagttaatagcata 45349708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 12141154 - 12141221
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaa-tacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||| ||||||| ||| |||||||||||||  ||||||||||||||||||||||    
T  12141154 catcgctaaaaacgtaaaaggtgaatatgcgaacaaactcacaacaacccaagttaatagcatacaac 12141221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 336
Target Start/End: Complemental strand, 18768956 - 18768837
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccgg 316  Q
    ||||| || ||| |||| ||||| |||||||||||||| | |||||| |||||||||||||  ||||||||||| ||| | |   | |||||||||||||    
T  18768956 aagaaggagcttatgttatttaaagtggattttgaaaaagtctatgattctgttgactgggactatttggattcggttatgaaaggcatgtcttttccgg 18768857  T
Q  317 ttctgtggagaaagtggatt 336  Q
    || ||||| | |||||||||    
T  18768856 ttttgtggtggaagtggatt 18768837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 25255470 - 25255395
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||| |||||||||| || ||| ||||||||||||| | | |||||||||||||||||| || ||||||    
T  25255470 atcgctaaaaacgtaaagggtgtatctgcgaacaaactcacaacatctaagttaatagcatacaacgacaaaatgc 25255395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 335
Target Start/End: Complemental strand, 8772397 - 8772279
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttct--aagccgtatgtcttttcc 314  Q
    ||||| || ||| |||| ||||| |||||||||||||| |||||||| |||||||||||||  || |||||||| ||| |  |||||  |||||||||||    
T  8772397 aagaaggagcttatgttatttaaagtggattttgaaaaagcctatgattctgttgactgggactacttggattcggttatgaaagcc--atgtcttttcc 8772300  T
Q  315 ggttctgtggagaaagtggat 335  Q
    |||| ||||| | ||||||||    
T  8772299 ggttttgtggcggaagtggat 8772279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 28044603 - 28044669
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| | | |||||||||| || | ||||||||||||||||||||    
T  28044603 catcgctaaaaacgtaaagggtgaatctacgaacaaactcataacatccaagttaatagcatacaac 28044669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 35664982 - 35665064
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgctaaaaa 151  Q
    |||||||||||| |||||||   ||| ||  |||||||||||| ||||||||||||||||||||||| || |||||| |||||    
T  35664982 catcgctaaaaacgtaaaggagaaatctgtgaacaaactcacagtacccaagttaatagcatacaacgacaaaatgccaaaaa 35665064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 17722188 - 17722127
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    |||||||| ||||| |||||||| ||||||||||||||||| ||||| |||||||| |||||    
T  17722188 aagaaagaccttttattgtttaaagtggattttgaaaaggcgtatgattctgttgattgggg 17722127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 35133190 - 35133125
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||| |||||| ||| ||||||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  35133190 atcgttaaaaacgtatagggtgaatctgcgaacaaactcacatcacccaagttaatagcatacaac 35133125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 35261542 - 35261481
Alignment:
Q  74 ctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||  |||||| ||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  35261542 ctaaaaacataaaggatgaatctgcgaacaaactcacaatatccaagttaatagcatacaac 35261481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 433521 - 433585
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| | |||||||||||||||| ||||    
T  433521 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataaca 433585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 29617550 - 29617621
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatg 144  Q
    ||||||||| ||||| ||||||| ||||||||||||||||| | ||||||||||||||  ||||||| |||||    
T  29617550 cgctaaaaacgtaaatggtgaatctgcaaacaaactcacaaca-ccaagttaatagcactcaacaacaaaatg 29617621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 38050913 - 38050981
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaa 137  Q
    |||||||||||||||||||||||||||| |||| ||| |||||| | |||| | ||||| |||||||||    
T  38050913 catcgctaaaaatgtaaagggtgaatttacaaataaattcacaacatccaaatcaatagaatacaacaa 38050981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 19404604 - 19404663
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagc 128  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||  | |||||||||||||    
T  19404604 catcgctaaaaatgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagc 19404663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 22927700 - 22927759
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||||||||| ||||||||| ||||||||||||  | ||||||| ||||||||    
T  22927700 cgctaaaaatgtaaaggatgaatttgcgaacaaactcacagcaaccaagttgatagcata 22927759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 43573085 - 43573026
Alignment:
Q  226 cttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttg 285  Q
    ||||||||||| ||||||||||||||||| || || ||||||||||| |||| |||||||    
T  43573085 cttttgttgttcaaggtggattttgaaaaagcgtacgactctgttgaatgggattatttg 43573026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 46822590 - 46822673
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgctaaaaat 152  Q
    |||||||| ||| |||||  |||||| ||| ||||||||||||| | |||||||||||||||||||  || |||||||| ||||    
T  46822590 catcgctacaaacgtaaaaagtgaatatgcgaacaaactcacaacatccaagttaatagcatacaatgacaaaatgctacaaat 46822673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 19297100 - 19297038
Alignment:
Q  83 taaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||| ||| ||||||||||||| |||||| ||||||||||| |||| | ||||||    
T  19297100 taaagggtgaatctgcgaacaaactcacaacacccaaattaatagcatataacagcaaaatgc 19297038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 28407765 - 28407831
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||||  |||||||| ||| ||| ||||||||||||  | ||||||||||||||||||||    
T  28407765 catcgctaaaaacataaagggtaaatctgcgaacaaactcacagcatccaagttaatagcatacaac 28407831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 12377562 - 12377627
Alignment:
Q  223 gatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggat 288  Q
    |||||||||||||||||||| || || |||||| | ||||| | |||||| |||||||||||||||    
T  12377562 gatcttttgttgtttaaggtcgacttcgaaaagacttatgattttgttgattggggttatttggat 12377627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 22743187 - 22743122
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| ||||||||| ||| || |||||| ||| |||||| |||||||||||||||    
T  22743187 atcgctaaaaacgtatagggtgaatctgcgaaaaaactcccaacacccaaattaatagcatacaac 22743122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 29969527 - 29969466
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    |||||||||||| ||||||| || ||||||||||||||||| | ||| |||||||| |||||    
T  29969527 aagaaagatcttctgttgttcaaagtggattttgaaaaggcgtttgattctgttgattgggg 29969466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 9449998 - 9450050
Alignment:
Q  83 taaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||| ||||||||||||| ||| || |||||||||||||||    
T  9449998 taaagggtgaatatgcgaacaaactcacaacacctaaattaatagcatacaac 9450050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 9977061 - 9977141
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatg-ctaaaaat 152  Q
    |||||||| ||||||||||||| ||  || ||| |||||| | |||||||||||||||||||| || ||||| ||||||||    
T  9977061 gctaaaaacgtaaagggtgaatctgtgaaaaaattcacaacatccaagttaatagcatacaacgacaaaatgtctaaaaat 9977141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 26610627 - 26610691
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcataca 133  Q
    ||||| |||||| ||||| ||||||| ||| |||||||||||| |||| |||||||||| |||||    
T  26610627 catcgttaaaaacgtaaaaggtgaatctgcgaacaaactcacagtaccaaagttaatagtataca 26610691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 26623636 - 26623712
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||||  | ||||||||||| ||| ||| || ||||||    
T  26623636 catcgcttaaaacgtaaagggtgaatctgcgaacaaactcacaacgctcaagttaatagtatagaacgacaaaatgc 26623712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 37849086 - 37849026
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatac 132  Q
    ||||||||||||||||  | ||| ||||||||||||||||  | |||||||||||||||||    
T  37849086 cgctaaaaatgtaaagaataaatctgcaaacaaactcacagcatccaagttaatagcatac 37849026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 7640605 - 7640664
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||| | ||||| ||| ||||||||||||| | ||||||||||||||||    
T  7640605 cgctaaaaacgtaaatgatgaatctgcgaacaaactcacaacatccaagttaatagcata 7640664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 17222830 - 17222889
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||| |||||| ||||| ||| ||||||||||||| | |||||||| |||||||    
T  17222830 cgctaaaaatataaaggatgaatctgcgaacaaactcacaacatccaagttactagcata 17222889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 23085768 - 23085709
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| |||||||||||| || |||| |||||||||||    
T  23085768 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagtatccaaattaatagcata 23085709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 138
Target Start/End: Complemental strand, 34893496 - 34893429
Alignment:
Q  71 tcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaac 138  Q
    ||||||||||| | |||| ||||| ||  ||||||||||||||| ||| |||||||||||| ||||||    
T  34893496 tcgctaaaaatattaaggatgaatctgtgaacaaactcacaatatccatgttaatagcataaaacaac 34893429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 2407839 - 2407773
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||| |||||| |||||| |||||| ||| ||||||||||||| ||| | |||| |||||||||||    
T  2407839 catcgttaaaaacgtaaagagtgaatctgcgaacaaactcacaacacctatgttagtagcatacaac 2407773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 13592340 - 13592398
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||||||| ||||| ||| ||||||||||||  | | ||||||||||||||    
T  13592340 gctaaaaatgtaaaggatgaatctgcgaacaaactcacagcatcgaagttaatagcata 13592398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 13796802 - 13796852
Alignment:
Q  95 ttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||| ||||||||||||| | |||||||||||||||||||| || ||||||    
T  13796802 ttgcgaacaaactcacaacatccaagttaatagcatacaacgacaaaatgc 13796852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 38799025 - 38798963
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||| |||||| ||| | ||||||| ||| ||||||||||||| | ||||||||||||||||    
T  38799025 catcgttaaaaacgtacaaggtgaatctgcgaacaaactcacaacatccaagttaatagcata 38798963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 4530285 - 4530232
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaata 126  Q
    ||||||||||||||| |||||| ||| |  |||||||||| |||||||||||||    
T  4530285 gctaaaaatgtaaagtgtgaatctgcgatgaaactcacaacacccaagttaata 4530232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 28476466 - 28476413
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaata 126  Q
    |||||||| ||||| ||||||| ||||||||||||||||  || ||||||||||    
T  28476466 gctaaaaacgtaaatggtgaatctgcaaacaaactcacagcactcaagttaata 28476413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 31235612 - 31235673
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||| ||||||  ||||||||  ||||||||||||  | ||||||||||||||||    
T  31235612 atcgctaaaaacgtaaagaatgaatttgtgaacaaactcacagcatccaagttaatagcata 31235673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 46700277 - 46700217
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||| ||||||  |||||||||||| ||||| ||||||||||| |||| |||||||||||||    
T  46700277 atcgttaaaaacataaagggtgaatctgcaa-caaactcacaacaccctagttaatagcata 46700217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 46822260 - 46822203
Alignment:
Q  74 ctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||||    
T  46822260 ctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcata 46822203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 37074174 - 37074222
Alignment:
Q  233 tgtttaaggtggattttgaaaaggcctatgactctgttgactggggtta 281  Q
    ||||||| ||||||||||||||||| |||||||| || || ||||||||    
T  37074174 tgtttaaagtggattttgaaaaggcttatgactcggtggattggggtta 37074222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 38273280 - 38273228
Alignment:
Q  84 aaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    ||||| ||||||||| ||||||||||||| | ||| |||||||||||| ||||    
T  38273280 aaaggatgaatttgctaacaaactcacaacatccatgttaatagcataaaaca 38273228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 47550462 - 47550414
Alignment:
Q  233 tgtttaaggtggattttgaaaaggcctatgactctgttgactggggtta 281  Q
    ||||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  47550462 tgtttaaagtggattttgaaaaagcttatgattctgttgattggggtta 47550414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 47554927 - 47554879
Alignment:
Q  233 tgtttaaggtggattttgaaaaggcctatgactctgttgactggggtta 281  Q
    ||||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  47554927 tgtttaaagtggattttgaaaaagcttatgattctgttgattggggtta 47554879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 5e-50; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 215 - 351
Target Start/End: Original strand, 10561910 - 10562046
Alignment:
Q  215 tgaagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttcc 314  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||| |  | ||||||||||||||    
T  10561910 tgaagaaagatcttttgttgtttaaggtggatttcgaaaaggcctatgactctgtcgattggggttatttggattctgttttgggtcgtatgtcttttcc 10562009  T
Q  315 ggttctgtggagaaagtggattaaagagtgtgttagt 351  Q
    |||| |||||||||| |||||||||||||||||||||    
T  10562010 ggttttgtggagaaaatggattaaagagtgtgttagt 10562046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 215 - 351
Target Start/End: Complemental strand, 20397120 - 20396984
Alignment:
Q  215 tgaagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttcc 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||| |    ||||||||||||||    
T  20397120 tgaagaaagatcttttgttgtttaaggtggattttgaaaaggcctaggattctgttgattggggttatttggattctgttatggatcgtatgtcttttcc 20397021  T
Q  315 ggttctgtggagaaagtggattaaagagtgtgttagt 351  Q
    | |||| ||||||||||| ||||||||||||||||||    
T  20397020 gattctatggagaaagtgaattaaagagtgtgttagt 20396984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 215 - 348
Target Start/End: Complemental strand, 34977487 - 34977354
Alignment:
Q  215 tgaagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttcc 314  Q
    |||||||||||||| || |||||||||||||||| |||||||| ||||||| ||| || | ||||||| ||||||||||| |  | ||||||||||||||    
T  34977487 tgaagaaagatcttatgctgtttaaggtggatttcgaaaaggcttatgactttgtcgattagggttatatggattctgttttgggtcgtatgtcttttcc 34977388  T
Q  315 ggttctgtggagaaagtggattaaagagtgtgtt 348  Q
    |||||| |||||| ||||||| ||||||||||||    
T  34977387 ggttctttggagatagtggatcaaagagtgtgtt 34977354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 351
Target Start/End: Complemental strand, 46342522 - 46342445
Alignment:
Q  274 tggggttatttggattctgttctaagccgtatgtcttttccggttctgtggagaaagtggattaaagagtgtgttagt 351  Q
    |||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46342522 tggggttatttggattctgttctgggtcgtatgtcttttccggttttgtggagaaagtggattaaagagtgtgttagt 46342445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 2521041 - 2520975
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  2521041 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaac 2520975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 29552391 - 29552465
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgtt 294  Q
    ||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||    
T  29552391 aaagaccttttgttgtttaaagtggattttgaaaaggcatatgactcggttgattggggttatttggactctgtt 29552465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 35348569 - 35348507
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  35348569 catcgctaaaaacgtaaagggtgaatctgcaaacaaactcacaacacccaagttaatagcata 35348507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 31891135 - 31891200
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  31891135 atcgctaaaaacgtatagggtgaatttgcgaacaaactcacaacacccaagttaatagcatacaac 31891200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 7661895 - 7661965
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttgga 287  Q
    ||||| |||||||||||||||||||| ||||||||||| || ||||| |||||||| ||||||||||||||    
T  7661895 aagaaggatcttttgttgtttaaggtcgattttgaaaaagcgtatgattctgttgattggggttatttgga 7661965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 19853359 - 19853425
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||| |||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  19853359 catcgttaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaac 19853425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 230 - 336
Target Start/End: Complemental strand, 26695468 - 26695362
Alignment:
Q  230 tgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccggttctgtggagaaa 329  Q
    |||| ||||| |||||||||||||| || ||||| |||||||||||||| ||||||||||| ||| | |   | ||||||||||||||||||||| | ||    
T  26695468 tgttatttaaagtggattttgaaaaagcatatgattctgttgactggggctatttggattcggttatgaaaggcatgtcttttccggttctgtggcggaa 26695369  T
Q  330 gtggatt 336  Q
    |||||||    
T  26695368 gtggatt 26695362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 17949178 - 17949247
Alignment:
Q  76 aaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||||||||| ||||||| ||| ||||||    
T  17949178 aaaaatgtaaagggtgaatctgcgaacaaactcacaacacccaagttaataacatacaagaacaaaatgc 17949247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 17953030 - 17953099
Alignment:
Q  76 aaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||||||||| ||||||| ||| ||||||    
T  17953030 aaaaatgtaaagggtgaatctgcgaacaaactcacaacacccaagttaataacatacaagaacaaaatgc 17953099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 43853705 - 43853628
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgct 146  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||| | ||||||||||| ||||||||||| |||||||    
T  43853705 catcgctaaaaatgtaaatggttaatctgcgaacaaactcacaacatccaagttaataacatacaacaacaaaatgct 43853628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 8936624 - 8936497
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccggttc 319  Q
    ||||| ||| |||| ||||| ||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||| |   |   |||||||| || ||||    
T  8936624 aaagaccttatgttatttaaagtggattttgaaaaggcatatgactcggttgattgggggtatttggattctgttttgtccaagatgtctttccctgttc 8936525  T
Q  320 tgtggagaaagtggattaaagagtgtgt 347  Q
    | |||||||| ||||| | |||||||||    
T  8936524 tttggagaaaatggataagagagtgtgt 8936497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 20676585 - 20676458
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccggttc 319  Q
    ||||| ||| ||||||||||||| || ||||||||||| ||||| || || ||||||||||| || ||||||||| |  |  | ||||||||||| ||||    
T  20676585 aaagagcttatgttgtttaaggtagactttgaaaaggcatatgattcggtggactggggttacttagattctgttatgggttgcatgtcttttcctgttc 20676486  T
Q  320 tgtggagaaagtggattaaagagtgtgt 347  Q
    | |||||||| ||||| ||||| |||||    
T  20676485 tttggagaaaatggatcaaagaatgtgt 20676458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 9643638 - 9643576
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||| ||||| ||||||| || ||||||||||||||||||||| ||||||||||||||||||    
T  9643638 catcgataaaagtgtaaagagtaaatttgcaaacaaactcacaacacccaagttaatagcata 9643576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 19649245 - 19649171
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgtt 294  Q
    ||||| ||| |||||||||| ||||||||||||||||| ||||||||  |||| ||||| |||||||||||||||    
T  19649245 aaagaacttatgttgtttaaagtggattttgaaaaggcgtatgactcgattgattgggggtatttggattctgtt 19649171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 48257479 - 48257545
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||| |||||| ||||||||||||| ||| ||||||||||||| | ||||||||||||||||||||    
T  48257479 catcgttaaaaacgtaaagggtgaatctgcgaacaaactcacaaaatccaagttaatagcatacaac 48257545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 53811289 - 53811224
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||| ||||| ||||||| ||||||||||||||||||||||    
T  53811289 catcgctaaaaacgtaaagggtgaatctgcgaacaa-ctcacaacacccaagttaatagcatacaac 53811224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 56040493 - 56040569
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||| ||||||||||||| ||| | ||||||||||  | |||||||||||||||||||| || ||||||    
T  56040493 catcgctaaaaacgtaaagggtgaatctgcgagcaaactcacagcatccaagttaatagcatacaacgacaaaatgc 56040569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 43510457 - 43510382
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||  ||||||||||||  |||||||| || ||||||    
T  43510457 atcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaagttaatgacatacaacgacaaaatgc 43510382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 20569516 - 20569450
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaac 138  Q
    ||||||||| ||||||| ||||| ||| |||||||||||| || |||||||||||||||| ||||||    
T  20569516 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacattatccaagttaatagcatataacaac 20569450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 29966588 - 29966522
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||| |||||| ||||||| ||||| ||| ||||||||||||| | ||||||||||||||||||||    
T  29966588 catcgttaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatacaac 29966522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 32766776 - 32766710
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| | ||||||||||| ||  ||||||||||||  ||||||||||||||||||||||    
T  32766776 catcgctaaaaacgcaaagggtgaatctgagaacaaactcacagcacccaagttaatagcatacaac 32766710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 34024268 - 34024334
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaac 138  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| | |||||||||||||||| ||||||    
T  34024268 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacaac 34024334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 6155067 - 6155146
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaat---acccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||||  |||||||||||| ||| |||||||||||| |   |||||||||||||||||||||| || ||||||    
T  6155067 catcgctaaaaacataaagggtgaatctgcgaacaaactcacagtagcacccaagttaatagcatacaacgacaaaatgc 6155146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 27652204 - 27652139
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| ||| ||||| ||| ||||||||||||| || |||||||||||||||||||    
T  27652204 atcgctaaaaacgtataggatgaatctgcgaacaaactcacaacactcaagttaatagcatacaac 27652139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 33332438 - 33332487
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaa 119  Q
    ||||||||||| ||||||||||||||||| ||||||||||||| ||||||    
T  33332438 atcgctaaaaacgtaaagggtgaatttgcgaacaaactcacaacacccaa 33332487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 35261449 - 35261392
Alignment:
Q  74 ctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||| ||||||| ||||| ||||||||||||||||| | ||||||||||||||||    
T  35261449 ctaaaaacgtaaaggatgaatctgcaaacaaactcacaacatccaagttaatagcata 35261392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 47320260 - 47320325
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||||||  ||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  47320260 atcgctaaaaacgtaaagaatgaatctgcgaacaaactcacagcacccaagttaatagcatacaac 47320325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 18936043 - 18935987
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaata 126  Q
    |||||||||||  || ||||||||| ||||||||||||||||| |||||||||||||    
T  18936043 atcgctaaaaacatatagggtgaatctgcaaacaaactcacaacacccaagttaata 18935987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 21686089 - 21686153
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcataca 133  Q
    |||||||| ||| ||||||||||||| ||| ||||||||||||  ||||||||||||| ||||||    
T  21686089 catcgctacaaacgtaaagggtgaatatgcgaacaaactcacagcacccaagttaataacataca 21686153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 37465715 - 37465667
Alignment:
Q  98 caaacaaactcacaatacccaagttaatagcatacaacaactaaatgct 146  Q
    ||||||||||||||| |||||||||||||||||||||| || |||||||    
T  37465715 caaacaaactcacaacacccaagttaatagcatacaacgacaaaatgct 37465667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 51888063 - 51888119
Alignment:
Q  74 ctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcat 130  Q
    |||||||||||||||||| || ||| ||||||||||||| ||| |||||||||||||    
T  51888063 ctaaaaatgtaaagggtggatatgcgaacaaactcacaacacctaagttaatagcat 51888119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 3128582 - 3128653
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggat 288  Q
    ||||| ||||||||| ||||||||||  ||||||||||||| | ||| ||||| || |||||||||||||||    
T  3128582 aagaaggatcttttgctgtttaaggttaattttgaaaaggcgtttgattctgtggattggggttatttggat 3128653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 21090401 - 21090342
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| |||||||||||||||| || ||||||||||| ||||    
T  21090401 cgctaaaaacgtaaaggatgaatctgcaaacaaactcacactatccaagttaataacata 21090342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 22611442 - 22611379
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||| ||||||||||||| ||| ||||||||||||  |||||| |||||| ||||||||    
T  22611442 cgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaatttaataccatacaac 22611379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 1621362 - 1621424
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||| ||| ||||||||| ||| ||||||||||||| | |||||||||| |||||||||    
T  1621362 gctaaaaacgtatagggtgaatctgcgaacaaactcacaacatccaagttaattgcatacaac 1621424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 4644120 - 4644058
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||| ||||| ||| ||||| ||||||| | ||||||||||||||||    
T  4644120 catcgctaaaaacgtaaaggatgaatctgcgaacaagctcacaacatccaagttaatagcata 4644058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 11585858 - 11585904
Alignment:
Q  302 gtatgtcttttccggttctgtggagaaagtggattaaagagtgtgtt 348  Q
    |||||||||||||| || |||||||||||||||| ||||||||||||    
T  11585858 gtatgtcttttccgattttgtggagaaagtggatgaaagagtgtgtt 11585904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 13634377 - 13634311
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||  ||||||||||||| | | |||||| |||||  ||||||||||||||||||||||    
T  13634377 catcgctaaaagcgtaaagggtgaatctccgaacaaattcacagcacccaagttaatagcatacaac 13634311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 26633518 - 26633584
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||| ||||||| ||||||||||||| ||| ||||||||||||| | | ||| ||||||||||||||    
T  26633518 catcactaaaaacgtaaagggtgaatctgcgaacaaactcacaacatctaagctaatagcatacaac 26633584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 33921316 - 33921250
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||| ||||  ||||||| |||| ||| ||||||||||||| | ||||||||||||||||||||    
T  33921316 catcgctgaaaacataaagggagaatatgcgaacaaactcacaacatccaagttaatagcatacaac 33921250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 143
Target Start/End: Complemental strand, 48006668 - 48006598
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaat 143  Q
    |||||||||||||| | ||||| ||| |||||| |||||||  || |||||||||||||||||||| ||||    
T  48006668 gctaaaaatgtaaaagatgaatatgcgaacaaattcacaatgtcctagttaatagcatacaacaacaaaat 48006598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 53444380 - 53444318
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||| ||||||| | | ||||||||||||  ||||||||||||||||||    
T  53444380 catcgctaaaaacgtaaaaggtgaatctacgaacaaactcacagcacccaagttaatagcata 53444318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 1827128 - 1827189
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    |||||||||||||||||||| || |||||||||||||| || ||||| | |||||| |||||    
T  1827128 aagaaagatcttttgttgttcaaagtggattttgaaaaagcgtatgattttgttgattgggg 1827189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 29960797 - 29960862
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||  |||| ||||||| ||| ||||||||||||  ||||||||||| ||||||||||    
T  29960797 atcgctaaaaacataaaaggtgaatctgcgaacaaactcacagcacccaagttaaaagcatacaac 29960862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 47420357 - 47420296
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    |||||||| ||||||||||| || ||||||||||||||||| ||||| || ||||| |||||    
T  47420357 aagaaagaccttttgttgttcaaagtggattttgaaaaggcgtatgattcggttgattgggg 47420296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 9048918 - 9048866
Alignment:
Q  77 aaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagca 129  Q
    |||| ||||||||||||| || |||||||||||||| ||||||||| ||||||    
T  9048918 aaaacgtaaagggtgaatctgtaaacaaactcacaacacccaagtttatagca 9048866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 25274142 - 25274078
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| | | |||||||||||||| ||||    
T  25274142 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatctaagttaatagcatataaca 25274078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 36161973 - 36161897
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||| |||||| |||||| |||||| ||  ||||||||||||| ||||||||||||| |||| ||| || ||||||    
T  36161973 catcgttaaaaacgtaaagagtgaatctgtgaacaaactcacaacacccaagttaataacatataacgaccaaatgc 36161897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 2115418 - 2115477
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||  |||||| ||||| ||| |||||||||||| || ||||||||||||||||    
T  2115418 cgctaaaaacataaaggatgaatctgcgaacaaactcacagtatccaagttaatagcata 2115477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 9528707 - 9528766
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| |  |||||||||||||||    
T  9528707 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacattcaagttaatagcata 9528766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 11299864 - 11299919
Alignment:
Q  76 aaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||| ||||||| ||||| ||| ||||||||||||| ||||||||||||| ||||    
T  11299864 aaaaacgtaaaggatgaatctgcgaacaaactcacaacacccaagttaataacata 11299919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 12199541 - 12199607
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    |||||||| ||| ||||| ||||||| ||| ||||||||||||| ||||||| ||||| |||||||||    
T  12199541 catcgctacaaacgtaaatggtgaatctgcgaacaaactcacaacacccaag-taataacatacaaca 12199607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 21662699 - 21662632
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    ||||||||||||  |||| ||||||  ||| ||||| ||||||| || ||||||||||||||||||||    
T  21662699 catcgctaaaaacataaatggtgaaactgcgaacaacctcacaacactcaagttaatagcatacaaca 21662632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 21671463 - 21671396
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    ||||||||||||  |||| ||||||  ||| ||||| ||||||| || ||||||||||||||||||||    
T  21671463 catcgctaaaaacataaatggtgaaactgcgaacaacctcacaacactcaagttaatagcatacaaca 21671396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 23280356 - 23280285
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggat 288  Q
    ||||| |||||  ||||||||||||| |||||||| || |||| ||| | |||||| |||||||||||||||    
T  23280356 aagaaggatctaatgttgtttaaggtagattttgagaaagcctgtgattatgttgattggggttatttggat 23280285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 36184764 - 36184717
Alignment:
Q  98 caaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||||||| | |||||||||||||||||||| || ||||||    
T  36184764 caaacaaactcacaacatccaagttaatagcatacaacgacaaaatgc 36184717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 36194951 - 36194904
Alignment:
Q  88 ggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||| ||| ||||||||||||| | ||||||||||||||||||||    
T  36194951 ggtgaatctgcgaacaaactcacaacatccaagttaatagcatacaac 36194904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 42032399 - 42032442
Alignment:
Q  92 aatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||||||||||||| |  |||||||||||||||||||    
T  42032399 aatttgcaaacaaactcacaacattcaagttaatagcatacaac 42032442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 44947671 - 44947612
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| | ||||||||||| ||||    
T  44947671 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaataacata 44947612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 52060775 - 52060846
Alignment:
Q  74 ctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||||  |||||| |||||||||||||| || |  ||| ||||||| |||||||||| ||||||    
T  52060775 ctaaaaatgtaaaatgtgaatctgcaaacaaactcataacattcaaattaatagtatacaacaacaaaatgc 52060846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 52097746 - 52097805
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||||||||| ||| || |||||||||| | ||||||||||| ||||    
T  52097746 cgctaaaaacgtaaagggtgaatatgcgaataaactcacaacatccaagttaataccata 52097805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 53616480 - 53616539
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||||    
T  53616480 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcata 53616539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 111
Target Start/End: Original strand, 4142615 - 4142653
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcaca 111  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  4142615 gctaaaaatgtaaagggtgaatctgcgaacaaactcaca 4142653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 19896470 - 19896536
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||| |||||| ||||| ||||||| ||| |||||||||| |  | ||||||||||||||||||||    
T  19896470 catcgttaaaaacgtaaatggtgaatctgcgaacaaactcatatcatccaagttaatagcatacaac 19896536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 20399739 - 20399773
Alignment:
Q  153 gaatactcgtgtttccagatctgcaacgttgacga 187  Q
    |||||||||||| ||||||||||||||||||||||    
T  20399739 gaatactcgtgtctccagatctgcaacgttgacga 20399773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 28857663 - 28857601
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||| ||||| ||| ||||||||||||    ||||||||||||||||    
T  28857663 catcgctaaaaacgtaaaggatgaatctgcgaacaaactcacagctgccaagttaatagcata 28857601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 35964806 - 35964872
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaac 138  Q
    ||||||||| ||||||  ||| ||||| ||||| ||||||| | |||||||||||||||| ||||||    
T  35964806 cgctaaaaacgtaaagaatgagtttgcgaacaatctcacaacatccaagttaatagcatataacaac 35964872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 56156493 - 56156551
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||| ||||| ||||||| ||| ||||||||||||| ||||| || |||||||||    
T  56156493 gctaaaaacgtaaaaggtgaatctgcgaacaaactcacaacacccaggtaaatagcata 56156551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 2624710 - 2624645
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaa 137  Q
    |||||||||  |||||  ||||||||| ||||||||||||| |||| | ||||||||||| |||||    
T  2624710 cgctaaaaaaataaagaatgaatttgcgaacaaactcacaacaccccatttaatagcatataacaa 2624645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 7393459 - 7393418
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcaca 111  Q
    ||||||||||||||||||||||||| ||| |||||| |||||    
T  7393459 atcgctaaaaatgtaaagggtgaatatgcgaacaaattcaca 7393418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 9145746 - 9145803
Alignment:
Q  77 aaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    |||||||||| ||||||| ||| ||| ||||||||| ||| || ||||||||||||||    
T  9145746 aaaatgtaaaaggtgaatctgcgaacgaactcacaacacctaaattaatagcatacaa 9145803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 22301099 - 22301050
Alignment:
Q  82 gtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  22301099 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcata 22301050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 52933796 - 52933861
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    ||||||||||||||||||| || ||| |||  |||||||||||  || |||||||||| |||||||    
T  52933796 catcgctaaaaatgtaaagcgtaaatctgcgcacaaactcacatcactcaagttaataacatacaa 52933861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 56199354 - 56199297
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcat 130  Q
    |||||||| ||||||| ||||| ||| ||||||||||||  | |||||||||||||||    
T  56199354 gctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcat 56199297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 9178615 - 9178539
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||| ||||||  |||||||||||  ||| |||||||||||   || ||||||||||||||||||| || ||||||    
T  9178615 catcgttaaaaacataaagggtgaaactgcgaacaaactcacgtcacacaagttaatagcatacaacgacaaaatgc 9178539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 9714171 - 9714107
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    |||| |||||| ||||||||||||  ||| ||||||||||||| || |||||||| | |||||||    
T  9714171 atcgttaaaaacgtaaagggtgaacctgcgaacaaactcacaacactcaagttaacaacatacaa 9714107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 10496597 - 10496521
Alignment:
Q  70 atcgctaaaaatgt-aaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||| || ||||| ||||| ||| |||||||||| |  ||||||||||||||||||| ||| | ||||||    
T  10496597 atcgctaaaaacgttaaaggatgaatctgcgaacaaactcaaagcacccaagttaatagcatacgacagcaaaatgc 10496521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 44596900 - 44596856
Alignment:
Q  91 gaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||| ||| ||||||||||||  ||||||||||||||||||||||    
T  44596900 gaatctgcgaacaaactcacagcacccaagttaatagcatacaac 44596856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 7e-40; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 24175978 - 24176065
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgctaaaaatgaat 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24175978 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaatttaatagcatacaacaactaaatgctaaaaatgaat 24176065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 217 - 351
Target Start/End: Original strand, 43120274 - 43120407
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccgg 316  Q
    |||||||||||| |||||||||||||| ||||| ||||||| |||||||||||||||||||| ||| |||| ||| |  |  | ||||||||||| ||||    
T  43120274 aagaaagatcttatgttgtttaaggtg-attttcaaaaggcttatgactctgttgactggggctatctggactctatgttgggtcgtatgtctttcccgg 43120372  T
Q  317 ttctgtggagaaagtggattaaagagtgtgttagt 351  Q
    |||| |||||||||||||||   ||||||||||||    
T  43120373 ttctttggagaaagtggatttgtgagtgtgttagt 43120407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 42460989 - 42460914
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||| ||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||| ||||||    
T  42460989 atcgctataaatgtaaagggtgaatctgcgaacaaactcacagtacccaagttaatagcatacaacaacaaaatgc 42460914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 24176086 - 24176143
Alignment:
Q  154 aatactcgtgtttccagatctgcaacgttgacgatcttttaatagaaatcaaattaac 211  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24176086 aatactcgtgttttcagatctgcaacgttgacgatcttttaatagaaatcaaattaac 24176143  T

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Target: chr3; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 48650582 - 48650647
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  48650582 atcgctaaaaatgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaac 48650647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 6954543 - 6954609
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  6954543 catcgctaaaaacgtaaagggtgaatctgcaaacaaactcacagcacccaagttaatagcatacaac 6954609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 351
Target Start/End: Complemental strand, 23820114 - 23819984
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccgg 316  Q
    |||||||||| | |||||||||||||||||||||||||||| |||||     |||||||||| ||| |||| |||||  |  | ||||||||||| ||||    
T  23820114 aagaaagatcgtatgttgtttaaggtggattttgaaaaggcttatga----tttgactggggctatctggactctgtgttgggtcgtatgtctttcccgg 23820019  T
Q  317 ttctgtggagaaagtggattaaagagtgtgttagt 351  Q
    |||| |||||||||||||||   ||||||||||||    
T  23820018 ttctttggagaaagtggattcgtgagtgtgttagt 23819984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 14859731 - 14859655
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||||||| ||||||||| ||| ||||| ||||||| |||||||||||||||||||||| || ||||||    
T  14859731 catcgctaaaaatgtatagggtgaatctgctaacaatctcacaacacccaagttaatagcatacaacgacaaaatgc 14859655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 31271680 - 31271747
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaa 137  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||| |||||||||||||    
T  31271680 atcgctaaaaacgtaaagggtgaatctgcaaacaaactcacaacacctaagttattagcatacaacaa 31271747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 12050495 - 12050572
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgct 146  Q
    |||| ||||||||||||||||||||||||| |||||||||||| ||  |||||||||| |||||||| || |||||||    
T  12050495 catctctaaaaatgtaaagggtgaatttgcgaacaaactcacactattcaagttaataacatacaacgacaaaatgct 12050572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 12333675 - 12333736
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  12333675 aagaaagatctgttgttgtttaaagtggattttgaaaaggcgtatgactcagttgactgggg 12333736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 36461284 - 36461349
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    |||||||||||||||||||||||||| ||| ||||||||||||  || ||||||||||||||||||    
T  36461284 catcgctaaaaatgtaaagggtgaatctgctaacaaactcacagcactcaagttaatagcatacaa 36461349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 9797381 - 9797457
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||| || ||||||||||||| | ||||||||||||||  |||||||||||||||||||||| || ||||||    
T  9797381 catcgctaagaacgtaaagggtgaatatacaaacaaactcacagcacccaagttaatagcatacaacgacaaaatgc 9797457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 21313274 - 21313211
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||||||||||||||| | | ||||||||||||  ||||||||||||||||||||||    
T  21313274 cgctaaaaatgtaaagggtgaatctccgaacaaactcacagcacccaagttaatagcatacaac 21313211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 30165910 - 30165981
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggat 288  Q
    ||||| |||||||||||||||||||| ||||||||||| || ||||| ||| |||| |||||||||||||||    
T  30165910 aagaaggatcttttgttgtttaaggtcgattttgaaaaagcatatgattctattgattggggttatttggat 30165981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 38142765 - 38142698
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaa 137  Q
    ||||||||||||||||||||||||| ||||||||||||||||  |  ||||||||||| |||||||||    
T  38142765 atcgctaaaaatgtaaagggtgaatatgcaaacaaactcacagcattcaagttaatagtatacaacaa 38142698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 4711723 - 4711657
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||| |||||||  |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  4711723 catcactaaaaacataaaggatgaatctgcaaacaaactcacaacacccaagttaatagcatacaac 4711657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 6903160 - 6903102
Alignment:
Q  76 aaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    ||||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||||    
T  6903160 aaaaatgtaaaggatgaatttacaaacaaactcacaatatctaagttaatagcatacaa 6903102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 7546856 - 7546790
Alignment:
Q  70 atcgctaaaaatgta-aagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  7546856 atcgctaaaaacgtataagggtgaatctgcaaacaaactcacagcacccaagttaatagcatacaac 7546790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 45568292 - 45568358
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||| || |||||||||  ||||||||||||||||||||||    
T  45568292 catcgctaaaaacgtaaagggtgaatctgcgaataaactcacatcacccaagttaatagcatacaac 45568358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 46304371 - 46304433
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||| ||||||||||||| ||| ||||||||||||| || |||||||||||||||||||    
T  46304371 gctaaaaacgtaaagggtgaatctgcgaacaaactcacaacactcaagttaatagcatacaac 46304433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 52922964 - 52923030
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||  | ||||||||||||||||||||    
T  52922964 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcagccaagttaatagcatacaac 52923030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 628771 - 628836
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||||||| ||||| ||| ||||||||||||| |||||||||||||| |||||||    
T  628771 atcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacacccaagttaatagaatacaac 628836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 21289662 - 21289727
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| ||||||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  21289662 atcgctaaaaacgtatagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaac 21289727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 44959820 - 44959885
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    |||||||||||| ||||||||||||| |||||| |||||||||  | |||||||||||||||||||    
T  44959820 catcgctaaaaacgtaaagggtgaatctgcaaataaactcacagcatccaagttaatagcatacaa 44959885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 53807706 - 53807771
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||||||| ||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  53807706 atcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaccacccaagttaatagcatacaac 53807771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 27924403 - 27924530
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccggttc 319  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||||||||||  | || |||||| |  | |||||| |  | |  ||||||||||| |||     
T  27924403 aaagatcttatgttgttcaagctggattttgaaaaggcttatgactctgtaaattgaggttatctaaactctgttttgggtcacatgtcttttcccgttt 27924502  T
Q  320 tgtggagaaagtggattaaagagtgtgt 347  Q
    | |||||||||||||||| |||||||||    
T  27924503 tatggagaaagtggattagagagtgtgt 27924530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 336
Target Start/End: Original strand, 46907257 - 46907376
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccgg 316  Q
    ||||| ||||||||| | ||||||||||||||||| ||||| |||  ||| || || ||||||||| ||||| | ||| |  | |||||||||||||| |    
T  46907257 aagaaggatcttttgctatttaaggtggattttgagaaggcttatacctcggtggattggggttatctggatgccgttttgggtcgtatgtcttttcctg 46907356  T
Q  317 ttctgtggagaaagtggatt 336  Q
    |  |||||||||||||||||    
T  46907357 tgttgtggagaaagtggatt 46907376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 9998704 - 9998642
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||| ||||||||||||| | | ||||||||||||  ||||||||||||||||||||||    
T  9998704 gctaaaaacgtaaagggtgaatctacgaacaaactcacagcacccaagttaatagcatacaac 9998642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 10108473 - 10108411
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||| ||||||||||||| | | ||||||||||||  ||||||||||||||||||||||    
T  10108473 gctaaaaacgtaaagggtgaatctacgaacaaactcacagcacccaagttaatagcatacaac 10108411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 10229713 - 10229651
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||| ||||||||||||| | | ||||||||||||  ||||||||||||||||||||||    
T  10229713 gctaaaaacgtaaagggtgaatctacgaacaaactcacagcacccaagttaatagcatacaac 10229651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 21533656 - 21533722
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||| ||| ||| ||| ||||||||||||  ||||||||||||||||||||||    
T  21533656 catcgctaaaaacgtaaaaggtaaatctgcgaacaaactcacagcacccaagttaatagcatacaac 21533722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 33580121 - 33580059
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||| ||||||| ||||||||||||| ||| |||||| |||||| ||||||||||||||||||    
T  33580121 catcactaaaaacgtaaagggtgaatctgcgaacaaaatcacaacacccaagttaatagcata 33580059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 40487566 - 40487504
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||||  ||||| |||||||||| ||||||||||||| ||||||||||||| ||||    
T  40487566 catcgctaaaaacataaagagtgaatttgcgaacaaactcacaacacccaagttaataacata 40487504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 40556943 - 40556877
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||||  |||||||||||| ||| ||||||||||||| ||||||||  ||||||||||||    
T  40556943 catcgctaaaaacataaagggtgaatctgcgaacaaactcacaacacccaagtgcatagcatacaac 40556877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 50194182 - 50194244
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  50194182 catcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcata 50194244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 35175645 - 35175580
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    |||||||||||| ||||| | ||||| ||| ||||||||||||| || ||||||||||||||||||    
T  35175645 catcgctaaaaacgtaaaagatgaatctgcgaacaaactcacaacactcaagttaatagcatacaa 35175580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 51303495 - 51303556
Alignment:
Q  74 ctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||| ||| | ||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  51303495 ctaaaaacgtatatggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaac 51303556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 51923967 - 51923902
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| ||| || || ||| ||||||||||||| ||||||||||||||||||||||    
T  51923967 atcgctaaaaacgtataggatggatatgcgaacaaactcacaacacccaagttaatagcatacaac 51923902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 16235666 - 16235591
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||| ||| ||||| ||| ||| ||||||||||||  | |||||||||||||||||||| || ||||||    
T  16235666 atcgctaaaaacgtatagggtaaatctgcgaacaaactcacaccatccaagttaatagcatacaacgacaaaatgc 16235591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 47896392 - 47896309
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgctaaaaat 152  Q
    |||| |||||||  ||||||| |||| | | ||||||||||||| || ||||||||||||||||||| || |||||||| ||||    
T  47896392 catccctaaaaacttaaagggagaatctacgaacaaactcacaacactcaagttaatagcatacaacgacaaaatgctacaaat 47896309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 48200022 - 48199979
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaa 112  Q
    |||||||||||| ||||||||||||||||| |||||||||||||    
T  48200022 catcgctaaaaacgtaaagggtgaatttgcgaacaaactcacaa 48199979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 21431854 - 21431788
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||| ||||||| ||| ||||| ||||||  ||||||||||||| ||||||||    
T  21431854 catcgctaaaaacgtaaatggtgaatctgcgaacaatctcacagcacccaagttaatatcatacaac 21431788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 32701732 - 32701666
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||||| |||| ||||||| ||| ||||||||||||  | ||||||| ||||||||||||    
T  32701732 catcgctaaaaatataaaaggtgaatctgcgaacaaactcacagcatccaagttcatagcatacaac 32701666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 43017129 - 43017063
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||| ||||| ||  || |||||||||| ||| ||||||||||||||||||    
T  43017129 catcgctaaaaacgtaaaggatgaatatgtgaataaactcacaacacctaagttaatagcatacaac 43017063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 46934886 - 46934824
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||| ||||| | | ||||||||||||| | ||||||||||||||||    
T  46934886 catcgctaaaaacgtaaaggatgaatctacgaacaaactcacaacatccaagttaatagcata 46934824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 54149232 - 54149166
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||  ||| ||| ||||||||  ||||| ||||||||||||||||    
T  54149232 catcgctaaaaacgtaaagggtgaacctgcgaactaactcacatcacccaggttaatagcatacaac 54149166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 8914952 - 8914887
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| | ||||||| ||| ||||||||||||  || |||||||||||||||||||    
T  8914952 atcgctaaaaacgtataaggtgaatctgcgaacaaactcacatcactcaagttaatagcatacaac 8914887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 11757612 - 11757669
Alignment:
Q  233 tgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattc 290  Q
    |||||||||| |||||||||||||| || ||||| ||||| ||||||||| |||||||    
T  11757612 tgtttaaggttgattttgaaaaggcttacgactcagttgattggggttatctggattc 11757669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 19918819 - 19918880
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    |||||||| ||||||||||| || ||||||||||||||||| ||||| ||||| || |||||    
T  19918819 aagaaagaccttttgttgttcaaagtggattttgaaaaggcgtatgattctgtagattgggg 19918880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 21916717 - 21916656
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcataca 133  Q
    ||||||||||||||||| ||||| ||  ||||||||||||  | ||||||||||||||||||    
T  21916717 cgctaaaaatgtaaaggatgaatctgagaacaaactcacatcatccaagttaatagcataca 21916656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 38859980 - 38860025
Alignment:
Q  90 tgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  38859980 tgaatctgcgaacaaactcacaacacccaagttaatagcatacaac 38860025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 7448761 - 7448825
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcataca 133  Q
    ||||| |||||| ||||| ||||||| ||| ||||||||||||  ||| ||||||||||||||||    
T  7448761 catcgataaaaacgtaaatggtgaatctgcgaacaaactcacatcacctaagttaatagcataca 7448825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 7456903 - 7456967
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcataca 133  Q
    ||||| |||||| ||||| ||||||| ||| ||||||||||||  ||| ||||||||||||||||    
T  7456903 catcgataaaaacgtaaatggtgaatctgcgaacaaactcacatcacctaagttaatagcataca 7456967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 10233297 - 10233245
Alignment:
Q  83 taaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| | | ||||||||||||  ||||||||||||||||||||||    
T  10233297 taaagggtgaatgtacgaacaaactcacagcacccaagttaatagcatacaac 10233245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 2598454 - 2598407
Alignment:
Q  84 aaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||| |||||||||||||||||||||||||  || ||||||||||||    
T  2598454 aaaggatgaatttgcaaacaaactcacaatattcatgttaatagcata 2598407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 3848749 - 3848808
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||||    
T  3848749 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcata 3848808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 25162680 - 25162621
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| |||||  || ||||||||||||| | ||||||||||||||||    
T  25162680 cgctaaaaacgtaaaggatgaatccgcgaacaaactcacaacatccaagttaatagcata 25162621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 25631356 - 25631415
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||||||||| ||||| ||| ||||||||||||  | ||||||||||| ||||    
T  25631356 cgctaaaaatgtaaaggatgaatctgcgaacaaactcacatcatccaagttaataacata 25631415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 145
Target Start/End: Original strand, 27706074 - 27706149
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||| ||| |||| |||| ||  |||||||| |||  |||||||||||||||||||||| || ||||||    
T  27706074 atcgctaaaaacgtatagggcgaatctgggaacaaactaacagcacccaagttaatagcatacaacgacaaaatgc 27706149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 29503705 - 29503646
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||||||||| ||||| ||| |||| |||||||  | ||||||||||||||||    
T  29503705 cgctaaaaatgtaaaggatgaatatgcgaacatactcacagaatccaagttaatagcata 29503646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 30648549 - 30648608
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||  |||||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  30648549 cgctaaaaacataaaggatgaatctgcgaacaaactcacaacatccaagttaatagcata 30648608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 32607713 - 32607654
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| | ||| ||||||||||||    
T  32607713 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaggttaatagcata 32607654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 36906366 - 36906307
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||||    
T  36906366 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcata 36906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 41818455 - 41818380
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||| |||||||||||  | | ||||||||||||  ||| | ||||||||||| ||||||| ||||||    
T  41818455 atcgctaaaaatataaagggtgaaactacgaacaaactcacatcaccaatgttaatagcatgcaacaacaaaatgc 41818380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 44907229 - 44907288
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| | |||| |||||||||||    
T  44907229 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaaattaatagcata 44907288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 53508462 - 53508403
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagca 129  Q
    |||||||||||  |||||||||||| ||| |||||| |||||| | ||||||||||||||    
T  53508462 atcgctaaaaacataaagggtgaatctgcgaacaaaatcacaacatccaagttaatagca 53508403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 12116345 - 12116283
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||| | ||||||||||||||||    
T  12116345 catcgctaaaaacgtaaaggatgaatctaagaacaaactcacaacatccaagttaatagcata 12116283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 22803277 - 22803215
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||| | ||||||  ||||||||||||  | ||||||||||||||||    
T  22803277 catcgctaaaaacgtaaaggataaatttgtgaacaaactcacagcatccaagttaatagcata 22803215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 38546040 - 38545978
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||| ||||||| ||||||||||||| ||  ||||||||| ||  ||||||||||||||||||    
T  38546040 catcactaaaaacgtaaagggtgaatctgggaacaaactcccaccacccaagttaatagcata 38545978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 52115897 - 52115943
Alignment:
Q  98 caaacaaactcacaatacccaagttaatagcatacaacaactaaatg 144  Q
    ||||||||||||||| ||||||||||||| |||| |||||| |||||    
T  52115897 caaacaaactcacaacacccaagttaataacatataacaacaaaatg 52115943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 953380 - 953449
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaac 138  Q
    |||||||||||| |||||  |||||||| | || |||||||||| ||| |||||||| ||||| ||||||    
T  953380 catcgctaaaaacgtaaaaagtgaatttacgaataaactcacaaaacctaagttaatcgcataaaacaac 953449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 27856405 - 27856340
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||||| | ||||| ||| ||||||||||||  | ||||||||||||||| ||||    
T  27856405 atcgctaaaaacgtaaaagatgaatctgcgaacaaactcacatcatccaagttaatagcatgcaac 27856340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 35864813 - 35864878
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    |||| ||||||| |||||   ||||||||| ||||| ||||||| | |||||||||||||||||||    
T  35864813 catctctaaaaacgtaaaaaatgaatttgcgaacaacctcacaacatccaagttaatagcatacaa 35864878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 4822043 - 4821971
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||  |||||  ||||| ||| ||||||||||||  |||||||||||||||||| |||| | ||||||    
T  4822043 gctaaaaacataaagaatgaatctgcgaacaaactcacatcacccaagttaatagcatataacagcaaaatgc 4821971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 9827300 - 9827348
Alignment:
Q  233 tgtttaaggtggattttgaaaaggcctatgactctgttgactggggtta 281  Q
    ||||||| ||||||||||||||||| |||||||| || || ||||||||    
T  9827300 tgtttaaagtggattttgaaaaggcgtatgactcggtggattggggtta 9827348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 38440421 - 38440485
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    ||||||||| ||||||| ||||| ||| | ||||||||||  | |||||||||||||||| ||||    
T  38440421 cgctaaaaacgtaaaggatgaatctgcgagcaaactcacagcatccaagttaatagcatataaca 38440485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 46979832 - 46979892
Alignment:
Q  74 ctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    ||||||| ||||||| | ||| |||||||||||||| || | |||||||||||| ||||||    
T  46979832 ctaaaaacgtaaaggattaatctgcaaacaaactcataacatccaagttaatagtatacaa 46979892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 51487322 - 51487270
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagtt 122  Q
    ||||||||||| ||||||||||||| ||| |||||| |||||| || ||||||    
T  51487322 atcgctaaaaacgtaaagggtgaatctgcgaacaaattcacaacactcaagtt 51487270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 145
Target Start/End: Original strand, 10237065 - 10237140
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||| ||| ||||||||| ||| ||||||||||||| |||||||||||||||||||||| || ||||||    
T  10237065 atcgctaaaaacgtatagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgc 10237140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 35220579 - 35220504
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||  |||||||||||||||||||||| || ||||||    
T  35220579 atcgctaaaaacgtaaagggtgaatatgcgaacaaactcacagcacccaagttaatagcatacaacgacaaaatgc 35220504  T

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Target: chr2; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 7677721 - 7677787
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||| |||||| |||||||||||||||||  ||||||||||||||||||||||    
T  7677721 catcgctaaaaacgtaaaaggtgaacttgcaaacaaactcacagcacccaagttaatagcatacaac 7677787  T

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Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 7646729 - 7646664
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||||| ||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  7646729 atcgctaaaaacgtaaaaggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaac 7646664  T

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Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 18763719 - 18763658
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||||    
T  18763719 atcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcata 18763658  T

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Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 27097260 - 27097321
Alignment:
Q  74 ctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  27097260 ctaaaaacgtaaagggtgaatctgcaaacaaactcacaacacccaagttaatagtatacaac 27097321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 1421927 - 1421852
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||| ||||||| ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  1421927 catcactaaaaacgtaaagg-tgaatctgcaaacaaactcacaacacccaagttaatagcatacaacgacaaaatgc 1421852  T

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Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 29173565 - 29173641
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||| ||||||| ||||| ||| ||||||||||||| ||| ||||||||| ||||||||||| ||||||    
T  29173565 catcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacaccaaagttaataacatacaacaacaaaatgc 29173641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 10929916 - 10929841
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||  |||||||||||| ||||||||||||||||  | ||||||||||||||| ||||||| ||||||    
T  10929916 atcgctaaaaacataaagggtgaatatgcaaacaaactcacagcatccaagttaatagcattcaacaacaaaatgc 10929841  T

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Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 5427717 - 5427783
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||  ||||||||||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  5427717 catcgctaaaagcgtaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaac 5427783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 31788708 - 31788642
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||  | ||||||||||||||||||||    
T  31788708 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcatccaagttaatagcatacaac 31788642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 33585583 - 33585649
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||| |||||| ||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  33585583 catcgttaaaaacgtaaaggatgaatatgcgaacaaactcacaacacccaagttaatagcatacaac 33585649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 34128533 - 34128595
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatac 132  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||| ||||||||||| |||||    
T  34128533 atcgcaaaaaatgtaaagggtgaatctgcaaacaacctcacaatatccaagttaataacatac 34128595  T

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Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 12554036 - 12554105
Alignment:
Q  76 aaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||| ||||||||||||| ||| ||||||||||||| ||||||||||||| |||||||| || ||||||    
T  12554036 aaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatatcatacaacgacaaaatgc 12554105  T

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Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 4228374 - 4228315
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||||||||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  4228374 cgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcata 4228315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 30420920 - 30420861
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||||||||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  30420920 cgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcata 30420861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 336
Target Start/End: Complemental strand, 35489366 - 35489271
Alignment:
Q  241 gtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccggttctgtggagaaagtggatt 336  Q
    |||||||||||||| || |||||||||||||| ||||| ||||||||||| ||| | |   ||||||||||||| ||| ||||| | |||||||||    
T  35489366 gtggattttgaaaaagcatatgactctgttgattggggctatttggattcggttatgaaaggtatgtcttttcctgttttgtggcggaagtggatt 35489271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 281042 - 280984
Alignment:
Q  77 aaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||| ||||||||||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  281042 aaaacgtaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaac 280984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 4041443 - 4041509
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    |||| |||||| ||||||||||||| ||| ||||||||||||| ||| ||||||||||||| |||||    
T  4041443 atcgttaaaaacgtaaagggtgaatctgcgaacaaactcacaacacctaagttaatagcatgcaaca 4041509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 4100587 - 4100522
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||| | ||||||||||| ||||||||    
T  4100587 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaaca-ccaagttaatatcatacaac 4100522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 4779005 - 4778939
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||  |||||| |||||| ||||||||    
T  4779005 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaaattaataacatacaac 4778939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 12677299 - 12677361
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||||  |||||||||||| ||| || ||||||| |||||||||||||||||||||    
T  12677299 catcgctaaaaacataaagggtgaatctgcgaataaactcataatacccaagttaatagcata 12677361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 19062199 - 19062261
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||| ||||||||||||| ||| | ||||||||||  ||||||||||||||||||||||    
T  19062199 gctaaaaacgtaaagggtgaatctgcgagcaaactcacatcacccaagttaatagcatacaac 19062261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 335
Target Start/End: Original strand, 28399137 - 28399255
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttct--aagccgtatgtcttttcc 314  Q
    ||||| || ||| |||| ||||| |||||||||||||| |||||||| |||||||||||||  || |||||||| ||| |  |||||  |||||||||||    
T  28399137 aagaaggagcttatgttatttaaagtggattttgaaaaagcctatgattctgttgactgggactacttggattcggttatgaaagcc--atgtcttttcc 28399234  T
Q  315 ggttctgtggagaaagtggat 335  Q
    |||| ||||| | ||||||||    
T  28399235 ggttttgtggcggaagtggat 28399255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 1415809 - 1415748
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcat 130  Q
    |||||||||||| || || ||||||| ||| ||||||||||||| |||||||||||||||||    
T  1415809 catcgctaaaaacgttaaaggtgaatctgcgaacaaactcacaacacccaagttaatagcat 1415748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 3309196 - 3309131
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||| ||||||||| ||| || |||||||||  ||||||||||||||||||||||    
T  3309196 atcgctaaaaacgtatagggtgaatctgcgaataaactcacagcacccaagttaatagcatacaac 3309131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 17151675 - 17151602
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaat 143  Q
    |||| |||||| ||||||||||||| |||  |||||||||||| |  |||||||||||||||||||||| ||||    
T  17151675 atcgttaaaaacgtaaagggtgaatatgcggacaaactcacaacattcaagttaatagcatacaacaacaaaat 17151602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 17248996 - 17249061
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||||| ||||| | ||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  17248996 atcgctaaaaacgtaaatgatgaatctgcgaacaaactcacagcacccaagttaatagcatacaac 17249061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 33923956 - 33923895
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||| ||||| ||||||| ||| ||||||||||||  ||||||||||||||||||    
T  33923956 atcgctaaaaaggtaaaaggtgaatatgcgaacaaactcacagcacccaagttaatagcata 33923895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 11985081 - 11985157
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||| ||||| | ||||||||| |||||| |||||| | |||||||||||| |||||||| | ||||||    
T  11985081 catcgctaaaaacgtaaatgatgaatttgcgaacaaattcacaacatccaagttaataggatacaacagcaaaatgc 11985157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 14955780 - 14955716
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    |||||||||||| |||||| ||||| ||| ||||||||||||| ||| ||||||||| |||||||    
T  14955780 atcgctaaaaatataaaggatgaatctgcgaacaaactcacaacacctaagttaataacatacaa 14955716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 19028768 - 19028824
Alignment:
Q  75 taaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||||||| ||||| ||||||| || |||||||||||||||    
T  19028768 taaaaatgtaaaaggtgaatttgcgaacaatctcacaacactcaagttaatagcata 19028824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 31193184 - 31193244
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagca 129  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||| |||||| |||| ||||    
T  31193184 catcactaaaaacgtaaagggtgaatttgcgaacaaactcacaacacccaatttaacagca 31193244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 4903997 - 4904068
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatg 144  Q
    |||||||| ||||||| ||||| | | ||||||||||||| | |||||||||||||||||||| || |||||    
T  4903997 gctaaaaacgtaaaggctgaatctacgaacaaactcacaacatccaagttaatagcatacaacgacaaaatg 4904068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 9986172 - 9986231
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  9986172 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcata 9986231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 27248981 - 27249040
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  27248981 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcata 27249040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 40659762 - 40659821
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||| | ||||||||||||||||    
T  40659762 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcata 40659821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 6174067 - 6174013
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaata 126  Q
    ||||||||||||||||| ||||| ||| ||||||||||||| | |||||||||||    
T  6174067 cgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagttaata 6174013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 8806120 - 8806058
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||| ||||| ||| ||||| ||||||| | ||||||||||||||||    
T  8806120 catcgctaaaaacgtaaaggatgaatctgcgaacaatctcacaacatccaagttaatagcata 8806058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 10548425 - 10548363
Alignment:
Q  83 taaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||| ||| |||||| |||||||||||||| | ||||||||||| ||||||||||| ||||||    
T  10548425 taaatggtcaatttgtaaacaaactcacaacatccaagttaataacatacaacaacaaaatgc 10548363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 24461695 - 24461633
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||| ||||  ||| ||||||||||||| ||| ||||||||||||||    
T  24461695 catcgctaaaaacgtaaaggatgaacctgcgaacaaactcacaacaccaaagttaatagcata 24461633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 28533802 - 28533868
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||| |||||| ||||| |||| || ||| ||||||||||||| || |||||||||||||||||||    
T  28533802 catcgttaaaaacgtaaaaggtggatctgcgaacaaactcacaacactcaagttaatagcatacaac 28533868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 29279418 - 29279480
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||| ||||||| ||| ||||||||||||| |||  |||||||||||||    
T  29279418 catcgctaaaaacgtaaatggtgaatatgcgaacaaactcacaacaccatagttaatagcata 29279480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 36692126 - 36692064
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| || ||||||||||||| ||  ||||||||||||| | ||||||||||||||||    
T  36692126 catcgctaagaacgtaaagggtgaatctgtgaacaaactcacaacaaccaagttaatagcata 36692064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 4221529 - 4221590
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggtta 281  Q
    ||||||||| |||| ||||| || ||||||||||| || ||||| |||||||||||||||||    
T  4221529 aaagatcttatgttatttaaagttgattttgaaaaagcatatgaatctgttgactggggtta 4221590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 39115623 - 39115672
Alignment:
Q  235 tttaaggtggattttgaaaaggcctatgactctgttgactggggttattt 284  Q
    |||||||| ||||||||||| |||||||||||| |||| |||||||||||    
T  39115623 tttaaggtagattttgaaaaagcctatgactctattgattggggttattt 39115672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 17994574 - 17994638
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcataca 133  Q
    |||||||| ||| |||| || ||||| ||| ||||||||||||| | ||||||||||||||||||    
T  17994574 catcgctacaaacgtaacggatgaatatgcgaacaaactcacaacatccaagttaatagcataca 17994638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 28037339 - 28037283
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaat 125  Q
    ||||| |||||||||||| | ||||||||| |||||||||||||||  |||||||||    
T  28037339 catcgttaaaaatgtaaatgatgaatttgcgaacaaactcacaatatacaagttaat 28037283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 36942970 - 36943034
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcataca 133  Q
    |||||||||||| ||||||||||||| ||| |||| |||||||  |||||  |||||||||||||    
T  36942970 catcgctaaaaacgtaaagggtgaatctgcgaacatactcacagcacccagattaatagcataca 36943034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 37994536 - 37994460
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||| ||||||  ||||| | ||||| ||| ||||||||||||| |||||||||||||||||| |||| | ||||||    
T  37994536 catccctaaaatcgtaaaagatgaatctgcgaacaaactcacaacacccaagttaatagcatataacagcaaaatgc 37994460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 84011 - 84070
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||  | ||||||||||||||||    
T  84011 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcata 84070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 8809531 - 8809456
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatg 144  Q
    |||| ||||||| ||||| | || || ||| ||||||||||||| | |||||||||||||||||||| || |||||    
T  8809531 catcactaaaaacgtaaaagatggatctgcgaacaaactcacaacatccaagttaatagcatacaacgacaaaatg 8809456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 8971458 - 8971517
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||| |||||||||| ||||| ||| ||||||||||||  | ||||||||||||||||    
T  8971458 cgctaagaatgtaaaggatgaatatgcgaacaaactcacagcatccaagttaatagcata 8971517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 22724090 - 22724217
Alignment:
Q  220 aaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttccggttc 319  Q
    ||||| ||| ||||||| || ||||||||||||||||| |||||||| ||  | ||||| |||||||| ||||||    | |||||||||| ||   | |    
T  22724090 aaagaccttatgttgttcaaagtggattttgaaaaggcatatgactcggtatattggggctatttggactctgtttagggtcgtatgtcttctcatatgc 22724189  T
Q  320 tgtggagaaagtggattaaagagtgtgt 347  Q
    | |||||||||||||||| |||| ||||    
T  22724190 tttggagaaagtggattagagagcgtgt 22724217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 27949677 - 27949614
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    ||||||||| ||||| | ||||| | | ||||||||||||| | ||||||||||||||||||||    
T  27949677 cgctaaaaacgtaaatgatgaatctccgaacaaactcacaacatccaagttaatagcatacaac 27949614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 36234249 - 36234190
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||| ||||| ||  ||||||||||||| | ||||||||||||||||    
T  36234249 cgctaaaaacgtaaaggatgaatctgtgaacaaactcacaacatccaagttaatagcata 36234190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 37876454 - 37876517
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatac 132  Q
    ||||||||||||  |||| ||||||| ||| ||||||||| ||  |||||||||||||||||||    
T  37876454 catcgctaaaaacataaatggtgaatctgcgaacaaactcgcatcacccaagttaatagcatac 37876517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 39310728 - 39310775
Alignment:
Q  83 taaagggtgaatttgcaaacaaactcacaatacccaagttaatagcat 130  Q
    |||||||||||| ||  ||||||||||||| |||||||||||||||||    
T  39310728 taaagggtgaatctgtgaacaaactcacaacacccaagttaatagcat 39310775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 43396970 - 43397028
Alignment:
Q  72 cgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||| ||||||||||||| || || |||||| |||| ||||||||||||||||||    
T  43396970 cgctaaaaacgtaaagggtgaatctggaa-caaactaacaacacccaagttaatagcata 43397028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 19852418 - 19852480
Alignment:
Q  226 cttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggat 288  Q
    ||||||||||| ||||||||||||||||| || || ||||| |||||||| || ||| |||||    
T  19852418 cttttgttgttcaaggtggattttgaaaaagcgtacgactcggttgactgagggtatctggat 19852480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 16376185 - 16376124
Alignment:
Q  75 taaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaaca 136  Q
    |||||||||| | ||||||| ||| ||||||||||||  | |||||||||| ||||||||||    
T  16376185 taaaaatgtagacggtgaatctgcgaacaaactcacatcatccaagttaatcgcatacaaca 16376124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 6358763 - 6358795
Alignment:
Q  103 aaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||||| ||||||||||||||||||||||    
T  6358763 aaactcacaacacccaagttaatagcatacaac 6358795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 9667609 - 9667657
Alignment:
Q  233 tgtttaaggtggattttgaaaaggcctatgactctgttgactggggtta 281  Q
    ||||||| ||||||||||||||||| || ||||| ||||| ||||||||    
T  9667609 tgtttaaagtggattttgaaaaggcttacgactcagttgattggggtta 9667657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 13838670 - 13838714
Alignment:
Q  235 tttaaggtggattttgaaaaggcctatgactctgttgactggggt 279  Q
    ||||||||||||||||| ||||| |||||||| ||||| ||||||    
T  13838670 tttaaggtggattttgagaaggcatatgactccgttgattggggt 13838714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 18107603 - 18107655
Alignment:
Q  74 ctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaata 126  Q
    ||||||| |||||| |||||| ||| ||||||||||||| || ||||||||||    
T  18107603 ctaaaaacgtaaagagtgaatatgcgaacaaactcacaacacgcaagttaata 18107655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 21966231 - 21966183
Alignment:
Q  233 tgtttaaggtggattttgaaaaggcctatgactctgttgactggggtta 281  Q
    ||||||| ||||||||||||||||| |||||||| || || ||||||||    
T  21966231 tgtttaaagtggattttgaaaaggcttatgactcggtggattggggtta 21966183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 31128638 - 31128690
Alignment:
Q  74 ctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaata 126  Q
    ||||||||||||||| | ||| ||| ||||||||||||| | |||||||||||    
T  31128638 ctaaaaatgtaaaggattaatctgcgaacaaactcacaacatccaagttaata 31128690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 33760041 - 33760117
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||| ||||||| ||| | || ||||||||| |||  || |||||||||||| ||||||| | ||||||    
T  33760041 catcgctaaaaacgtaaaggatgagtctgtaaacaaactaacagcacacaagttaatagcttacaacagcaaaatgc 33760117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 1586 - 1524
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||    
T  1586 catcgctaaaaacgtaaagggtgaatctgcaaacaaactcacaacatccaagttaatagcata 1524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 313
Target Start/End: Complemental strand, 11223 - 11150
Alignment:
Q  240 ggtggattttgaaaaggcctatgactctgttgactggggttatttggattctgttctaagccgtatgtcttttc 313  Q
    ||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||| |  | |||||||||||||    
T  11223 ggtggatttcgaaaaggcctatgactctgttgattggggctatttggattctgttatggggcgtatgtcttttc 11150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 351
Target Start/End: Complemental strand, 8993 - 8951
Alignment:
Q  309 ttttccggttctgtggagaaagtggattaaagagtgtgttagt 351  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8993 ttttccggttctgtggagaaagtggattaaagagtgtgttagt 8951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 351
Target Start/End: Complemental strand, 13927 - 13885
Alignment:
Q  309 ttttccggttctgtggagaaagtggattaaagagtgtgttagt 351  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13927 ttttccggttctgtggagaaagtggattaaagagtgtgttagt 13885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 1820 - 1896
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||| ||||||||||||| ||| |||||||||| || ||||||||||||| ||||||||| | ||||||    
T  1820 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcataacacccaagttaataacatacaacagcaaaatgc 1896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 65889 - 65965
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    ||||| |||||||||||||||||||| ||| |||||||||| || || ||||||||||||||||||| || ||||||    
T  65889 catcggtaaaaatgtaaagggtgaatctgcgaacaaactcataacactcaagttaatagcatacaacgacaaaatgc 65965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 71147 - 71223
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaacaactaaatgc 145  Q
    |||||||||||| ||||||| | ||| | |||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  71147 catcgctaaaaacgtaaaggattaatctacaaacaaacttacaacacccaagttaatagcatacaacaacaaaatgc 71223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 51012 - 50953
Alignment:
Q  75 taaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    |||||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  51012 taaaaatgtaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaa 50953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 3145 - 3215
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttgga 287  Q
    ||||| |||||||||||||||||||| |||||||||||||| ||||| ||||| || ||||| ||||||||    
T  3145 aagaaggatcttttgttgtttaaggttgattttgaaaaggcgtatgattctgtagattggggctatttgga 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 6272 - 6213
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagc 128  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||| | |||||||||||||    
T  6272 catcactaaaaatgtaaaaggtgaatctgcaaacaaactcacaacatccaagttaatagc 6213  T

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Target: scaffold0219 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 14718 - 14780
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||| |||||||| |||||| ||||||||| ||||||||||||  ||||||||||||||||||    
T  14718 catcactaaaaatataaaggatgaatttgcgaacaaactcacagcacccaagttaatagcata 14780  T

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Target: scaffold0136 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 9889 - 9951
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||  |||||||| |||||||||    
T  9889 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaagtcaatagcata 9951  T

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Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 71717 - 71783
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaac 135  Q
    |||||||| ||| ||||||||||||| | | ||||||||||||  ||||||||||||||||||||||    
T  71717 catcgctagaaacgtaaagggtgaatctccgaacaaactcacagcacccaagttaatagcatacaac 71783  T

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Target: scaffold0472 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 4805 - 4744
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgactgggg 278  Q
    |||||||||||||||||||| || ||||||||||||||||| | ||| |||||||| |||||    
T  4805 aagaaagatcttttgttgttcaaagtggattttgaaaaggcgtttgattctgttgattgggg 4744  T

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Target: scaffold0603 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 7954 - 7892
Alignment:
Q  73 gctaaaaatgta-aagggtgaatttgcaaacaaactcacaatacccaagttaatagcatacaa 134  Q
    |||||||| ||| |||||||||| ||| ||||||||||||| ||||||||||||| |||||||    
T  7954 gctaaaaacgtacaagggtgaatatgcgaacaaactcacaacacccaagttaataacatacaa 7892  T

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Target: scaffold0127 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 15734 - 15672
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||||  ||||| |||||| ||| ||||||||||||  ||||||||||||||||||    
T  15734 catcgctaaaaacataaagagtgaatctgcgaacaaactcacagcacccaagttaatagcata 15672  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 83264 - 83325
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    ||||||||||| ||||| | ||||| ||| ||||||||||||| | ||||||||||||||||    
T  83264 atcgctaaaaacgtaaatgatgaatctgcgaacaaactcacaacatccaagttaatagcata 83325  T

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Target: scaffold0495 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 5642 - 5586
Alignment:
Q  75 taaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||| ||||||| ||||||||| |||||||| ||| || ||||||||||||||||    
T  5642 taaaaacgtaaaggatgaatttgcgaacaaacttacagtatccaagttaatagcata 5586  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 32598 - 32658
Alignment:
Q  73 gctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcataca 133  Q
    |||||||| ||||||||||||| ||  ||||||||||||| || ||||||||||| |||||    
T  32598 gctaaaaacgtaaagggtgaatctgggaacaaactcacaacactcaagttaatagtataca 32658  T

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Target: scaffold0746 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 1556 - 1614
Alignment:
Q  230 tgttgtttaaggtggattttgaaaaggcctatgactctgttgactggggttatttggat 288  Q
    |||| |||||||||||||| ||||| || ||||| || ||||||||||| |||||||||    
T  1556 tgttatttaaggtggatttcgaaaaagcttatgattcggttgactgggggtatttggat 1614  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 57935 - 57997
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||||||||||| ||||||| | ||| ||| ||||||||||||  | ||||||||||||||||    
T  57935 catcgctaaaaacgtaaaggataaatctgcgaacaaactcacagcatccaagttaatagcata 57997  T

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Target: scaffold1350 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 1099 - 1042
Alignment:
Q  217 aagaaagatcttttgttgtttaaggtggattttgaaaaggcctatgactctgttgact 274  Q
    |||||| |||||||||| || ||||| || ||||| ||||| ||||||||||||||||    
T  1099 aagaaatatcttttgttattcaaggtagactttgagaaggcgtatgactctgttgact 1042  T

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Target: scaffold0150 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 10053 - 10114
Alignment:
Q  70 atcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcata 131  Q
    |||| |||||| | ||||| ||||||||| ||||||||||||| | ||| ||||||||||||    
T  10053 atcgataaaaacgaaaaggatgaatttgcgaacaaactcacaacatccatgttaatagcata 10114  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 3892 - 3953
Alignment:
Q  69 catcgctaaaaatgtaaagggtgaatttgcaaacaaactcacaatacccaagttaatagcat 130  Q
    |||||||||||||||||||||| ||| ||| | ||||||| ||  | |||||||||||||||    
T  3892 catcgctaaaaatgtaaagggtaaatctgcgatcaaactcccatcatccaagttaatagcat 3953  T

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