View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0947_low_79 (Length: 255)

Name: NF0947_low_79
Description: NF0947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0947_low_79
NF0947_low_79
[»] chr6 (36 HSPs)
chr6 (1-64)||(878029-878092)
chr6 (1-64)||(878172-878235)
chr6 (1-63)||(24736775-24736837)
chr6 (4-56)||(7765185-7765237)
chr6 (4-60)||(18611945-18612001)
chr6 (1-56)||(15008249-15008304)
chr6 (1-64)||(33345534-33345597)
chr6 (4-56)||(16967559-16967611)
chr6 (1-56)||(4102621-4102676)
chr6 (1-56)||(4338130-4338185)
chr6 (4-55)||(27079731-27079782)
chr6 (3-60)||(21384929-21384986)
chr6 (3-56)||(22857621-22857674)
chr6 (3-55)||(11140401-11140453)
chr6 (2-56)||(10698721-10698776)
chr6 (4-55)||(15008074-15008125)
chr6 (1-56)||(30909192-30909247)
chr6 (10-56)||(10588897-10588943)
chr6 (10-56)||(28129369-28129415)
chr6 (10-56)||(29157781-29157827)
chr6 (10-60)||(29163316-29163366)
chr6 (3-56)||(25119414-25119467)
chr6 (3-56)||(30387144-30387197)
chr6 (4-56)||(4338216-4338268)
chr6 (4-56)||(22031738-22031790)
chr6 (1-56)||(4338173-4338228)
chr6 (10-48)||(18611775-18611813)
chr6 (10-56)||(19281428-19281474)
chr6 (10-56)||(26713118-26713164)
chr6 (3-56)||(7371042-7371095)
chr6 (3-56)||(20522792-20522845)
chr6 (199-227)||(878366-878394)
chr6 (1-37)||(4102597-4102633)
chr6 (1-37)||(7765056-7765092)
chr6 (1-37)||(30909235-30909271)
chr6 (4-40)||(30909371-30909407)
[»] chr2 (51 HSPs)
chr2 (1-64)||(18297379-18297442)
chr2 (1-64)||(2264431-2264494)
chr2 (1-64)||(4578893-4578955)
chr2 (1-64)||(14550626-14550689)
chr2 (1-62)||(4578765-4578825)
chr2 (4-60)||(4281040-4281096)
chr2 (4-60)||(20710551-20710607)
chr2 (10-60)||(24183537-24183587)
chr2 (1-62)||(2264300-2264361)
chr2 (1-62)||(25193637-25193698)
chr2 (1-62)||(25193768-25193829)
chr2 (3-56)||(31711557-31711610)
chr2 (3-55)||(1095313-1095365)
chr2 (4-56)||(36636154-36636206)
chr2 (1-57)||(41345473-41345529)
chr2 (10-60)||(3147226-3147276)
chr2 (10-56)||(19246716-19246762)
chr2 (10-60)||(37867208-37867258)
chr2 (10-56)||(43823293-43823339)
chr2 (3-60)||(12449183-12449240)
chr2 (3-56)||(20661539-20661592)
chr2 (3-56)||(31783840-31783893)
chr2 (3-56)||(42364539-42364592)
chr2 (1-64)||(4579023-4579083)
chr2 (4-56)||(28049149-28049201)
chr2 (1-53)||(39548471-39548523)
chr2 (4-56)||(41345298-41345350)
chr2 (1-56)||(28056013-28056068)
chr2 (10-56)||(4281221-4281267)
chr2 (10-56)||(22588462-22588508)
chr2 (3-49)||(30777477-30777523)
chr2 (14-56)||(39548441-39548483)
chr2 (10-56)||(43823470-43823516)
chr2 (10-60)||(44915431-44915481)
chr2 (3-60)||(20193967-20194024)
chr2 (4-56)||(3928212-3928264)
chr2 (1-53)||(13081278-13081330)
chr2 (4-56)||(13081318-13081370)
chr2 (3-55)||(15252965-15253017)
chr2 (10-50)||(34726746-34726786)
chr2 (4-56)||(36636330-36636382)
chr2 (4-56)||(44341889-44341941)
chr2 (4-38)||(12449100-12449134)
chr2 (10-56)||(16111567-16111613)
chr2 (14-56)||(16141415-16141457)
chr2 (10-56)||(22596448-22596494)
chr2 (4-38)||(31711663-31711697)
chr2 (4-37)||(16111668-16111701)
chr2 (3-56)||(35126637-35126690)
chr2 (1-38)||(43823327-43823364)
chr2 (10-38)||(22588364-22588392)
[»] chr7 (42 HSPs)
chr7 (1-64)||(48691827-48691890)
chr7 (1-64)||(46572778-46572841)
chr7 (1-64)||(15974064-15974127)
chr7 (1-64)||(48306130-48306193)
chr7 (3-60)||(5728727-5728784)
chr7 (1-56)||(32090040-32090095)
chr7 (10-56)||(32090083-32090129)
chr7 (3-60)||(31192496-31192553)
chr7 (3-60)||(34227816-34227873)
chr7 (3-56)||(44426645-44426698)
chr7 (4-56)||(24360546-24360598)
chr7 (4-56)||(30430542-30430594)
chr7 (4-56)||(39007221-39007273)
chr7 (4-56)||(44140502-44140554)
chr7 (1-56)||(48830201-48830256)
chr7 (10-56)||(43742303-43742349)
chr7 (3-56)||(31365318-31365371)
chr7 (3-56)||(41065913-41065966)
chr7 (4-56)||(46024818-46024870)
chr7 (4-56)||(48830380-48830432)
chr7 (1-56)||(27334928-27334983)
chr7 (1-56)||(39007178-39007233)
chr7 (10-56)||(6846723-6846769)
chr7 (10-60)||(10566141-10566191)
chr7 (10-56)||(10569746-10569792)
chr7 (10-56)||(26945658-26945704)
chr7 (4-53)||(25779497-25779546)
chr7 (4-56)||(27334971-27335023)
chr7 (4-56)||(32091312-32091364)
chr7 (4-60)||(33798502-33798558)
chr7 (4-56)||(42773744-42773796)
chr7 (4-56)||(46346148-46346200)
chr7 (1-60)||(46346101-46346160)
chr7 (2-40)||(34876226-34876264)
chr7 (2-56)||(38837673-38837727)
chr7 (3-56)||(7843663-7843716)
chr7 (1-38)||(24360410-24360447)
chr7 (1-38)||(25779361-25779398)
chr7 (3-56)||(32604854-32604907)
chr7 (3-56)||(45478361-45478414)
chr7 (1-38)||(48830244-48830281)
chr7 (3-55)||(6620666-6620718)
[»] chr1 (73 HSPs)
chr1 (1-64)||(23174606-23174669)
chr1 (1-64)||(23174737-23174800)
chr1 (1-53)||(2741553-2741605)
chr1 (4-56)||(23319239-23319291)
chr1 (4-60)||(37642898-37642954)
chr1 (4-63)||(23921142-23921201)
chr1 (1-56)||(23921324-23921379)
chr1 (10-56)||(17893217-17893263)
chr1 (10-56)||(18928832-18928878)
chr1 (2-56)||(31763821-31763875)
chr1 (10-56)||(35197600-35197646)
chr1 (10-60)||(45849249-45849299)
chr1 (3-56)||(47693810-47693863)
chr1 (3-55)||(11354456-11354508)
chr1 (1-61)||(11422357-11422417)
chr1 (4-56)||(16116473-16116525)
chr1 (4-56)||(28322611-28322663)
chr1 (4-56)||(51801052-51801104)
chr1 (4-55)||(20506521-20506572)
chr1 (1-56)||(20506695-20506750)
chr1 (1-56)||(31084003-31084058)
chr1 (3-54)||(46590705-46590756)
chr1 (2-64)||(180493-180555)
chr1 (10-56)||(17811137-17811183)
chr1 (10-56)||(21256051-21256097)
chr1 (10-56)||(31084189-31084235)
chr1 (10-56)||(35197424-35197470)
chr1 (10-56)||(44687868-44687914)
chr1 (10-56)||(45890391-45890437)
chr1 (3-56)||(14229305-14229358)
chr1 (10-55)||(18057583-18057628)
chr1 (3-56)||(24368462-24368515)
chr1 (3-56)||(32595151-32595204)
chr1 (4-56)||(2741513-2741565)
chr1 (3-55)||(12070555-12070607)
chr1 (4-56)||(19850655-19850707)
chr1 (4-56)||(30788784-30788836)
chr1 (4-56)||(31528999-31529051)
chr1 (4-56)||(44261083-44261135)
chr1 (1-64)||(180632-180695)
chr1 (1-56)||(19216602-19216657)
chr1 (1-56)||(28322568-28322623)
chr1 (1-56)||(44261123-44261178)
chr1 (1-56)||(44687782-44687837)
chr1 (1-55)||(30788824-30788878)
chr1 (10-56)||(33157045-33157091)
chr1 (3-60)||(9040991-9041048)
chr1 (10-55)||(16116655-16116700)
chr1 (3-56)||(18952530-18952583)
chr1 (3-56)||(23277353-23277406)
chr1 (3-56)||(29945264-29945317)
chr1 (12-56)||(30802979-30803023)
chr1 (4-56)||(33097816-33097868)
chr1 (3-55)||(35754616-35754668)
chr1 (4-56)||(51420862-51420914)
chr1 (1-53)||(51801012-51801064)
chr1 (2-53)||(31528959-31529010)
chr1 (10-56)||(1395218-1395264)
chr1 (10-52)||(9628547-9628589)
chr1 (10-60)||(10498040-10498090)
chr1 (10-56)||(19216568-19216614)
chr1 (10-60)||(32143708-32143758)
chr1 (10-60)||(51904822-51904872)
chr1 (1-38)||(10497898-10497935)
chr1 (3-56)||(14389891-14389944)
chr1 (1-38)||(20506670-20506707)
chr1 (1-38)||(21256201-21256238)
chr1 (1-38)||(23277328-23277365)
chr1 (1-38)||(23921299-23921336)
chr1 (1-38)||(31084046-31084083)
chr1 (1-38)||(37642763-37642800)
chr1 (1-56)||(10497857-10497910)
chr1 (10-38)||(11354370-11354398)
[»] scaffold0338 (1 HSPs)
scaffold0338 (1-64)||(6301-6364)
[»] scaffold0238 (1 HSPs)
scaffold0238 (1-64)||(24530-24593)
[»] chr8 (50 HSPs)
chr8 (1-64)||(7058962-7059025)
chr8 (1-64)||(1209575-1209638)
chr8 (3-56)||(185928-185981)
chr8 (3-56)||(10586005-10586058)
chr8 (4-60)||(24473185-24473241)
chr8 (3-56)||(1773233-1773286)
chr8 (3-60)||(5106675-5106732)
chr8 (3-56)||(17656665-17656718)
chr8 (3-56)||(34343296-34343349)
chr8 (4-56)||(23397224-23397276)
chr8 (1-64)||(4835868-4835931)
chr8 (1-64)||(4841313-4841376)
chr8 (4-55)||(35301841-35301892)
chr8 (10-53)||(42434363-42434406)
chr8 (10-56)||(9853043-9853089)
chr8 (10-55)||(1672184-1672229)
chr8 (3-56)||(27506850-27506903)
chr8 (3-60)||(32644187-32644244)
chr8 (1-56)||(9852837-9852892)
chr8 (1-56)||(13526182-13526237)
chr8 (5-56)||(13526225-13526276)
chr8 (1-56)||(13615717-13615772)
chr8 (5-56)||(13615760-13615811)
chr8 (10-56)||(2523557-2523603)
chr8 (10-56)||(40022599-40022645)
chr8 (10-56)||(40246596-40246642)
chr8 (3-56)||(23504637-23504690)
chr8 (3-56)||(35448281-35448334)
chr8 (1-62)||(4835723-4835788)
chr8 (1-62)||(4841168-4841233)
chr8 (4-56)||(18026930-18026982)
chr8 (1-56)||(12356129-12356184)
chr8 (1-56)||(23397049-23397104)
chr8 (10-53)||(28698089-28698132)
chr8 (1-56)||(30652400-30652454)
chr8 (5-56)||(34647382-34647433)
chr8 (1-56)||(34647558-34647613)
chr8 (14-57)||(39022768-39022811)
chr8 (10-56)||(6783487-6783533)
chr8 (10-56)||(17792836-17792882)
chr8 (10-56)||(18161343-18161389)
chr8 (3-56)||(2541134-2541186)
chr8 (15-56)||(8439132-8439173)
chr8 (10-55)||(15260083-15260128)
chr8 (11-56)||(23940758-23940803)
chr8 (11-56)||(30652368-30652412)
chr8 (1-38)||(34647533-34647570)
chr8 (1-38)||(40022750-40022787)
chr8 (10-38)||(1773136-1773164)
chr8 (20-60)||(45409698-45409738)
[»] chr4 (67 HSPs)
chr4 (1-64)||(10473294-10473357)
chr4 (3-60)||(16474960-16475017)
chr4 (4-56)||(38010498-38010550)
chr4 (1-64)||(638771-638834)
chr4 (1-64)||(10473425-10473488)
chr4 (10-54)||(25573687-25573731)
chr4 (1-56)||(25573642-25573697)
chr4 (1-52)||(26577471-26577522)
chr4 (1-64)||(38245700-38245763)
chr4 (1-64)||(45256665-45256728)
chr4 (10-56)||(8157233-8157279)
chr4 (10-60)||(36924295-36924345)
chr4 (4-62)||(50644484-50644542)
chr4 (3-56)||(12722882-12722935)
chr4 (3-56)||(21995717-21995770)
chr4 (3-56)||(31763052-31763105)
chr4 (3-56)||(37059859-37059912)
chr4 (3-56)||(54895451-54895504)
chr4 (4-60)||(1728828-1728884)
chr4 (4-56)||(21097900-21097952)
chr4 (4-60)||(30358618-30358674)
chr4 (1-56)||(6385737-6385792)
chr4 (1-56)||(17109863-17109918)
chr4 (4-55)||(22180430-22180481)
chr4 (1-56)||(25573599-25573654)
chr4 (1-56)||(29826091-29826146)
chr4 (4-55)||(49137340-49137391)
chr4 (1-56)||(49137514-49137569)
chr4 (10-56)||(27765053-27765099)
chr4 (10-60)||(36309470-36309520)
chr4 (10-60)||(36621178-36621228)
chr4 (3-60)||(1492719-1492776)
chr4 (4-57)||(24687031-24687084)
chr4 (3-56)||(43374494-43374547)
chr4 (4-56)||(6385780-6385832)
chr4 (3-55)||(8166023-8166075)
chr4 (4-56)||(9553072-9553124)
chr4 (1-56)||(1729008-1729063)
chr4 (1-48)||(30358404-30358451)
chr4 (2-56)||(33883427-33883481)
chr4 (10-60)||(48077313-48077363)
chr4 (10-56)||(50562895-50562941)
chr4 (3-56)||(2124489-2124542)
chr4 (3-60)||(6768450-6768507)
chr4 (2-55)||(6841965-6842018)
chr4 (4-53)||(29825918-29825967)
chr4 (4-56)||(18924045-18924097)
chr4 (4-55)||(8165907-8165958)
chr4 (4-55)||(43852156-43852207)
chr4 (1-56)||(50644304-50644359)
chr4 (10-56)||(10374097-10374143)
chr4 (4-38)||(31762975-31763009)
chr4 (10-60)||(47567950-47568000)
chr4 (10-60)||(52325158-52325207)
chr4 (1-38)||(1728983-1729020)
chr4 (3-56)||(9967814-9967867)
chr4 (10-55)||(16299339-16299384)
chr4 (1-38)||(29826066-29826103)
chr4 (1-38)||(38010538-38010575)
chr4 (1-38)||(49137489-49137526)
chr4 (1-38)||(50644347-50644384)
chr4 (3-56)||(53865111-53865164)
chr4 (4-56)||(4169187-4169239)
chr4 (1-53)||(16299373-16299425)
chr4 (1-56)||(20862153-20862206)
chr4 (1-57)||(24687071-24687127)
chr4 (10-38)||(33883340-33883368)
[»] chr5 (33 HSPs)
chr5 (3-56)||(39086564-39086617)
chr5 (1-61)||(28069437-28069497)
chr5 (2-64)||(34329969-34330031)
chr5 (1-64)||(2826228-2826291)
chr5 (10-56)||(8949475-8949521)
chr5 (3-60)||(11660922-11660979)
chr5 (3-56)||(23155689-23155742)
chr5 (3-60)||(39861720-39861777)
chr5 (4-56)||(4675494-4675546)
chr5 (4-56)||(23334934-23334986)
chr5 (10-56)||(16668227-16668273)
chr5 (10-56)||(33857487-33857533)
chr5 (3-56)||(15059480-15059533)
chr5 (3-60)||(23155572-23155629)
chr5 (3-56)||(42746566-42746619)
chr5 (4-56)||(33868751-33868803)
chr5 (10-56)||(703862-703908)
chr5 (10-56)||(11376525-11376571)
chr5 (3-53)||(20134346-20134396)
chr5 (10-56)||(22671850-22671896)
chr5 (10-56)||(22830642-22830688)
chr5 (5-55)||(42746688-42746738)
chr5 (10-55)||(35915889-35915934)
chr5 (1-56)||(4675534-4675587)
chr5 (4-56)||(25191854-25191906)
chr5 (3-55)||(39166285-39166337)
chr5 (4-38)||(11660839-11660873)
chr5 (1-35)||(33868791-33868825)
chr5 (1-38)||(8949509-8949546)
chr5 (1-38)||(16668202-16668239)
chr5 (3-56)||(36864114-36864167)
chr5 (10-38)||(703776-703804)
chr5 (4-60)||(16668047-16668103)
[»] chr3 (42 HSPs)
chr3 (1-64)||(51361717-51361780)
chr3 (1-64)||(52986697-52986760)
chr3 (3-60)||(36185845-36185902)
chr3 (1-56)||(41191797-41191852)
chr3 (1-64)||(52986828-52986891)
chr3 (10-56)||(8718901-8718947)
chr3 (10-56)||(9070788-9070834)
chr3 (4-56)||(28299556-28299608)
chr3 (4-60)||(34562606-34562662)
chr3 (4-56)||(39194555-39194607)
chr3 (1-60)||(28299466-28299525)
chr3 (1-56)||(28299513-28299568)
chr3 (1-64)||(31852959-31853022)
chr3 (12-62)||(7044574-7044624)
chr3 (10-56)||(23755885-23755931)
chr3 (10-56)||(41191620-41191666)
chr3 (4-54)||(53595438-53595488)
chr3 (3-56)||(16653543-16653596)
chr3 (3-56)||(19012438-19012491)
chr3 (8-61)||(19384588-19384641)
chr3 (3-56)||(27446157-27446210)
chr3 (1-62)||(50754838-50754899)
chr3 (1-62)||(50754969-50755030)
chr3 (4-56)||(23756055-23756107)
chr3 (4-56)||(47728951-47729003)
chr3 (5-56)||(51681423-51681474)
chr3 (1-56)||(53595478-53595533)
chr3 (10-56)||(47924310-47924356)
chr3 (10-60)||(49053366-49053416)
chr3 (4-57)||(8061551-8061604)
chr3 (11-56)||(12974135-12974180)
chr3 (10-55)||(16276904-16276949)
chr3 (4-56)||(23699871-23699923)
chr3 (4-56)||(23718326-23718378)
chr3 (4-56)||(23736782-23736834)
chr3 (1-53)||(53595521-53595573)
chr3 (2-56)||(8036933-8036987)
chr3 (3-56)||(14743590-14743643)
chr3 (1-38)||(23755919-23755956)
chr3 (1-38)||(34562763-34562800)
chr3 (10-38)||(8718768-8718796)
chr3 (10-38)||(9070655-9070683)
[»] scaffold0097 (1 HSPs)
scaffold0097 (4-60)||(14390-14446)
[»] scaffold0129 (1 HSPs)
scaffold0129 (11-60)||(20060-20109)
[»] scaffold0194 (1 HSPs)
scaffold0194 (4-56)||(28433-28485)
[»] scaffold0004 (1 HSPs)
scaffold0004 (3-55)||(96046-96098)
[»] scaffold0455 (1 HSPs)
scaffold0455 (10-56)||(7956-8002)
[»] scaffold0291 (1 HSPs)
scaffold0291 (3-56)||(9654-9707)
[»] scaffold0249 (1 HSPs)
scaffold0249 (10-49)||(23684-23723)
[»] scaffold0036 (1 HSPs)
scaffold0036 (10-57)||(108654-108701)
[»] scaffold0534 (1 HSPs)
scaffold0534 (10-56)||(9962-10008)
[»] scaffold0154 (1 HSPs)
scaffold0154 (4-46)||(37261-37303)
[»] scaffold0019 (1 HSPs)
scaffold0019 (10-56)||(72567-72613)
[»] scaffold0009 (1 HSPs)
scaffold0009 (10-56)||(203136-203182)
[»] scaffold0126 (1 HSPs)
scaffold0126 (3-56)||(37680-37733)
[»] scaffold0050 (1 HSPs)
scaffold0050 (4-60)||(21829-21885)


Alignment Details
Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 878029 - 878092
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  878029 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttggcattccg 878092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 878172 - 878235
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  878172 caaaatgggtttggagtacaactcacagaaaccattttcacaacaaaatggttttgacattccg 878235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 24736837 - 24736775
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattcc 63  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  24736837 caaaatgggtttggagtacaactcacagaaaccatttccacaacaaaatggttttggcattcc 24736775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 7765185 - 7765237
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  7765185 aatggttttggagtacaactcacagaaaccatttccacaacaaaatggttttg 7765237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 18611945 - 18612001
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  18611945 aatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttgacat 18612001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15008304 - 15008249
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  15008304 caaaatggttttggagtacaactcacataaaccatttccacagcaaaatggttttg 15008249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33345597 - 33345534
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||| ||||||||||||||   ||||||||||| |||||||    
T  33345597 caaaatgggtttggagtacaactcacagaaaccatttccacagataaatggttttggcattccg 33345534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 16967611 - 16967559
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  16967611 aatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttg 16967559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4102676 - 4102621
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||| ||||||||||||| |||||||||||||| |||||||||||||    
T  4102676 caaaatggttttgaagtacaactcacataaaccatttccacagcaaaatggttttg 4102621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4338185 - 4338130
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||| |||||||||||||||||||||||  |||||||||||||    
T  4338185 caaaatggttttggagtccaactcacaaaaaccatttccactgcaaaatggttttg 4338130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 27079782 - 27079731
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||||    
T  27079782 aatggttttggagtacaactcacagaaatcatttccacaacaaaatggtttt 27079731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 21384986 - 21384929
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| |||||||||||||||||| ||||||||| || | |||||||||||||||||    
T  21384986 aaatggttttggagtacaactcacagaaaccattttcatagcaaaatggttttgacat 21384929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 22857674 - 22857621
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| ||||||||||||||  ||||||||||||    
T  22857674 aaatggttttggagtacaactcacagaaaccatttccacagtaaaatggttttg 22857621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 11140453 - 11140401
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||| |||||||||||||||||| |||  ||||||||||||||||||||||    
T  11140453 aaatggttttggagtacaactcacagaaattatttccacaacaaaatggtttt 11140401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 10698776 - 10698721
Alignment:
Q  2 aaaatgggtttggagtac-aactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||| |||||||||| |||||||| |||||||||||||| |||||||||||||    
T  10698776 aaaatggttttggagtactaactcacagaaaccatttccacagcaaaatggttttg 10698721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 15008125 - 15008074
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    ||||| ||||||||||| |||||| |||||||||||||| ||||||||||||    
T  15008125 aatggttttggagtacagctcacagaaaccatttccacagcaaaatggtttt 15008074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30909192 - 30909247
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| ||||||||||||| |||| |||||||||||| | |||||||||||||    
T  30909192 caaaatggttttggagtacaacacacagaaaccatttccatagcaaaatggttttg 30909247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 10588943 - 10588897
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||||    
T  10588943 tttggagtacaactcacagaaactatttccacagcaaaatggttttg 10588897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 28129369 - 28129415
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||    
T  28129369 tttggagtacaactcaccaaaaccatttccacagcacaatggttttg 28129415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 29157781 - 29157827
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||||||||||||| |||||| ||||||    
T  29157781 tttggagtacaactcacagaaaccatttccacagcaaaatagttttg 29157827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 29163316 - 29163366
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||||||||| ||||| ||| |||||||||| |||||||||||||||||    
T  29163316 tttggagtacaattcacataaatcatttccacagcaaaatggttttgacat 29163366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 25119467 - 25119414
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  25119467 aaatggttttggagtacaactgacagaaaccatttacacagcaaaatggttttg 25119414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 30387197 - 30387144
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||||||||| ||| ||||||| |||||    
T  30387197 aaatggttttggagtacaactcacagaaaccatttctacagcaaaatgattttg 30387144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 4338268 - 4338216
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||| | ||| |||||||||| |||||||||||||    
T  4338268 aatggttttggagtacaactcatagaaatcatttccacagcaaaatggttttg 4338216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 22031790 - 22031738
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||| ||||||||| ||||||||| |||| |||||||||||||    
T  22031790 aatggttttggagtccaactcacagaaaccattttcacagcaaaatggttttg 22031738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4338228 - 4338173
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||| ||||| ||| |||||||||||||  |||||||||||||    
T  4338228 caaaatggttttggagtccaactaacagaaaccatttccactgcaaaatggttttg 4338173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 18611775 - 18611813
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaa 48  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  18611775 tttggagtacaactcacagaaaccatttccacagcaaaa 18611813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 19281474 - 19281428
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||| |||| |||| |||||||||||||    
T  19281474 tttggagtacaactcacagaaactattttcacagcaaaatggttttg 19281428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 26713164 - 26713118
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||||||| ||| || |||||||||||||| |||||||||||||    
T  26713164 tttggagtacagctcccagaaaccatttccacatcaaaatggttttg 26713118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 7371095 - 7371042
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||||||||| | | |||||| ||||||    
T  7371095 aaatggttttggagtacaactcacagaaaccatttctaaagcaaaatagttttg 7371042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 20522845 - 20522792
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||| | |||||||||||  |||||||| ||||||    
T  20522845 aaatggttttggagtacaactcatagaaaccatttccgaaacaaaattgttttg 20522792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Original strand, 878366 - 878394
Alignment:
Q  199 ggggtgtaggaagtaattatgttgggatt 227  Q
    |||||||||||||||||||||||||||||    
T  878366 ggggtgtaggaagtaattatgttgggatt 878394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4102633 - 4102597
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccattt 37  Q
    |||||||| |||||||||||||||||| |||||||||    
T  4102633 caaaatggttttggagtacaactcacagaaaccattt 4102597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7765056 - 7765092
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccattt 37  Q
    |||||||  ||||||||||||||||||||||||||||    
T  7765056 caaaatgattttggagtacaactcacaaaaaccattt 7765092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 30909235 - 30909271
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccattt 37  Q
    |||||||| |||||||||||||||||| |||||||||    
T  30909235 caaaatggttttggagtacaactcacagaaaccattt 30909271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 30909371 - 30909407
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttcca 40  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  30909371 aatggttttggagtacaactcacagaaaccatttcca 30909407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18297442 - 18297379
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18297442 caaaatgggtttggagtacaactcacaaaaaccatttccacagcaaaatggttttgacattccg 18297379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 2264431 - 2264494
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  2264431 caaaatgagtttggagtacaactcacaaaaatcatttccacaacaaaatggttttggcattccg 2264494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4578955 - 4578893
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  4578955 caaaatgggtttggagtacaactcacaaaaacca-ttccacagcaaaatggttttggcattccg 4578893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 14550689 - 14550626
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| |||||||    
T  14550689 caaaatgggtttggagtacaactcacataaatcatttccacagcaaaatggttttggcattccg 14550626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4578825 - 4578765
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattc 62  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  4578825 caaaatgggtttggagtacaactcacaaaaacca-ttccacagcaaaatggttttggcattc 4578765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 4281096 - 4281040
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  4281096 aatggttttggagtataactcacagaaaccatttccacaacaaaatggttttgacat 4281040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 20710551 - 20710607
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  20710551 aatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttgacat 20710607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 24183587 - 24183537
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  24183587 tttggagtacaactcacataaaccatttccacaacaaaatgattttgacat 24183537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2264300 - 2264361
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattc 62  Q
    |||||| |||||||||||||||||||| |||||||||| ||| ||||||||||||| |||||    
T  2264300 caaaattggtttggagtacaactcacagaaaccatttctacagcaaaatggttttggcattc 2264361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25193637 - 25193698
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattc 62  Q
    ||||||||||||||||||||||||||| ||||||||| || | ||||||||||||| |||||    
T  25193637 caaaatgggtttggagtacaactcacagaaaccattttcaaagcaaaatggttttggcattc 25193698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25193768 - 25193829
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattc 62  Q
    ||||||||||||||||||||||||||| ||||||||| || | ||||||||||||| |||||    
T  25193768 caaaatgggtttggagtacaactcacagaaaccattttcaaagcaaaatggttttggcattc 25193829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 31711557 - 31711610
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  31711557 aaatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttg 31711610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 1095365 - 1095313
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  1095365 aaatggttttggagtacaactcacagaaaccatttccacagcaaaatggtttt 1095313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 36636206 - 36636154
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  36636206 aatggttttggagtacaactcacaaaaaccatttccacagcaaaatgattttg 36636154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41345529 - 41345473
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttga 57  Q
    |||||||| ||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  41345529 caaaatggttttggagtacaacacacagaaaccatttccacatcaaaatggttttga 41345473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 3147276 - 3147226
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  3147276 tttggagtacaactcacataaaccatttccacagcaaaattgttttgacat 3147226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 19246716 - 19246762
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  19246716 tttggagtacaactcacagaaaccatttccacagcaaaatggttttg 19246762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 37867208 - 37867258
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  37867208 tttggagtacaactcacagaaaccatttccacagcaaaatagttttgacat 37867258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 43823293 - 43823339
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  43823293 tttggagtacaactcacataaatcatttccacaacaaaatggttttg 43823339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 12449240 - 12449183
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| |||||||||||||||| | ||||||||| |||| |||||||||||||||||    
T  12449240 aaatggttttggagtacaactcaaagaaaccattttcacagcaaaatggttttgacat 12449183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 20661592 - 20661539
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| || ||||||||||| |||||||||||||    
T  20661592 aaatggttttggagtacaactcacagaagccatttccacagcaaaatggttttg 20661539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 31783840 - 31783893
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||| ||||||||||||| |||||||||||||| |||||||||||||    
T  31783840 aaatggttttgaagtacaactcacagaaaccatttccacagcaaaatggttttg 31783893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 42364539 - 42364592
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  42364539 aaatggttttggagtacaactcacagaaaccattttcacagcaaaatggttttg 42364592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4579083 - 4579023
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    |||||||||||||||||||||||  ||||||||| ||||||| ||||||||||||| |||||||    
T  4579083 caaaatgggtttggagtacaact--caaaaacca-ttccacagcaaaatggttttggcattccg 4579023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 28049149 - 28049201
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| ||||||||||||||||| ||||||||||||||| || ||||||||||    
T  28049149 aatggttttggagtacaactcaccaaaaccatttccacagcacaatggttttg 28049201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39548471 - 39548523
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtt 53  Q
    |||||||| |||||||||||||||||| |||||||||||||  ||||||||||    
T  39548471 caaaatggttttggagtacaactcacataaaccatttccactgcaaaatggtt 39548523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 41345350 - 41345298
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||| |||||||    
T  41345350 aatggttttggagtacaactcacataaaccatttccacagcaaaacggttttg 41345298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28056068 - 28056013
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| ||||||||| |||||||| ||||||||| |||| |||||||||||||    
T  28056068 caaaatggttttggagtataactcacagaaaccattttcacagcaaaatggttttg 28056013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 4281267 - 4281221
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||||    
T  4281267 tttggagtacaactcacagaaacaatttccacagcaaaatggttttg 4281221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 22588508 - 22588462
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| ||| |||||||||||||||||| |||||    
T  22588508 tttggagtacaactcacagaaatcatttccacaacaaaatgtttttg 22588462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 30777523 - 30777477
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaat 49  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||    
T  30777523 aaatggttttggagtacaactcacagaaaccatttccacagcaaaat 30777477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 39548441 - 39548483
Alignment:
Q  14 gagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||| |||||||||||||| |||||||||||||    
T  39548441 gagtacaactcacagaaaccatttccacagcaaaatggttttg 39548483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 43823470 - 43823516
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||||||||||||| ||||||| |||||    
T  43823470 tttggagtacaactcacataaaccatttccacagcaaaatgattttg 43823516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 44915481 - 44915431
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||||||||| ||||| ||||||||| |||| |||||||||||||||||    
T  44915481 tttggagtacaattcacagaaaccattttcacagcaaaatggttttgacat 44915431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 20194024 - 20193967
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| |||||||||||||||||| ||| ||||| ||||  ||||||||||||||||    
T  20194024 aaatggttttggagtacaactcacagaaatcattttcacagtaaaatggttttgacat 20193967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 3928212 - 3928264
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||| ||||||||| ||||||||| |||| |||||||||||||    
T  3928212 aatggttttggagtccaactcacagaaaccattttcacagcaaaatggttttg 3928264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13081330 - 13081278
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtt 53  Q
    |||||||| |||||||| ||||||||| |||||||||||||  ||||||||||    
T  13081330 caaaatggttttggagtccaactcacagaaaccatttccactgcaaaatggtt 13081278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 13081370 - 13081318
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||| | ||||||||||| |||||||||||||| |||||||||||||    
T  13081370 aatggttttgaaatacaactcacagaaaccatttccacagcaaaatggttttg 13081318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 15253017 - 15252965
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||| |||||||||||||| ||||||||||||| | ||| |||||||||||    
T  15253017 aaatggttttggagtacaacttacaaaaaccattttcccaataaaatggtttt 15252965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 34726786 - 34726746
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatg 50  Q
    |||||||||||||||||| |||||||||||||| |||||||    
T  34726786 tttggagtacaactcacagaaaccatttccacagcaaaatg 34726746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 36636382 - 36636330
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||| ||||||||||||| ||| |||||||||| |||||||||||||    
T  36636382 aatggttttgaagtacaactcacataaatcatttccacagcaaaatggttttg 36636330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 44341941 - 44341889
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||| ||||||||| ||||||||| |||| |||||||||||||    
T  44341941 aatggttttggagtccaactcacagaaaccattttcacagcaaaatggttttg 44341889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 12449134 - 12449100
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttc 38  Q
    ||||| |||||||||||||||||||||||||||||    
T  12449134 aatggttttggagtacaactcacaaaaaccatttc 12449100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 16111567 - 16111613
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| ||||||||| ||||  ||||||||||||    
T  16111567 tttggagtacaactcacagaaaccattttcacagtaaaatggttttg 16111613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 16141457 - 16141415
Alignment:
Q  14 gagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||| ||| |||||||||||||||||| |||||    
T  16141457 gagtacaactcacagaaatcatttccacaacaaaatgattttg 16141415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 22596494 - 22596448
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||| |||| |||||||||| ||||||||||||    
T  22596494 tttggtgtacaactcacagaaactatttccacaataaaatggttttg 22596448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 31711663 - 31711697
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttc 38  Q
    ||||| |||||||||||||||||||||||||||||    
T  31711663 aatggttttggagtacaactcacaaaaaccatttc 31711697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 16111668 - 16111701
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccattt 37  Q
    ||||| ||||||||||||||||||||||||||||    
T  16111668 aatggttttggagtacaactcacaaaaaccattt 16111701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 35126690 - 35126637
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| ||| ||||||||||  |||||| |||||    
T  35126690 aaatggttttggagtacaactcacagaaatcatttccacagtaaaatgattttg 35126637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43823327 - 43823364
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  43823327 caaaatggttttggagtacaactcacataaaccatttc 43823364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 22588392 - 22588364
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttc 38  Q
    |||||||||||||||||||||||||||||    
T  22588392 tttggagtacaactcacaaaaaccatttc 22588364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 48691827 - 48691890
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48691827 caaaataggtttggagtacaactcacaaaaaccatttccacagcaaaatggttttgacattccg 48691890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 46572841 - 46572778
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||    
T  46572841 caaaatgggtttggagtacaactcatagaaaccatttccacaacaaaatggttttggcattccg 46572778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 15974127 - 15974064
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    |||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| |||||||    
T  15974127 caaaatggatttggagtacaactcacagaaaccatttccacagcaaaatggttttggcattccg 15974064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 48306130 - 48306193
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||| |||||||    
T  48306130 caaaatgggtttggagtacaactcacagaaaccatttccacagcaaaatgattttggcattccg 48306193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 5728727 - 5728784
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  5728727 aaatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttgacat 5728784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32090095 - 32090040
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  32090095 caaaatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttg 32090040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 32090129 - 32090083
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  32090129 tttggagtacaactcacaaaaaccatttccacagcaaaatggttttg 32090083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 31192553 - 31192496
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| |||||||||||| ||||| |||||||||||||| |||||||||||||||||    
T  31192553 aaatggttttggagtacaattcacagaaaccatttccacagcaaaatggttttgacat 31192496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 34227873 - 34227816
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  34227873 aaatggttttggagtacaactcacacaaaccattttcacaacaaaatgattttgacat 34227816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 44426645 - 44426698
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  44426645 aaatggttttggagtacaactcacataaaccatttccacagcaaaatggttttg 44426698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 24360546 - 24360598
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  24360546 aatggttttggagtacaactcacagaaaccatttccacatcaaaatggttttg 24360598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 30430542 - 30430594
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  30430542 aatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttg 30430594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 39007273 - 39007221
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  39007273 aatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttg 39007221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 44140554 - 44140502
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  44140554 aatggttttggagtacaactcacaaaaactatttccacagcaaaatggttttg 44140502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48830201 - 48830256
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| ||||||||||||| |||| |||||||||||||| |||||||||||||    
T  48830201 caaaatggttttggagtacaacacacagaaaccatttccacagcaaaatggttttg 48830256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 43742303 - 43742349
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  43742303 tttggagtacaactcacagaaaccatttccacagcaaaatggttttg 43742349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 31365318 - 31365371
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||| ||||| |||||||||||||| |||||||||||||    
T  31365318 aaatggttttggagtacaagtcacataaaccatttccacagcaaaatggttttg 31365371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 41065966 - 41065913
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| ||| |||||||||||||| |||||||||||||| |||||||||||||    
T  41065966 aaatggttttcgagtacaactcacagaaaccatttccacagcaaaatggttttg 41065913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 46024818 - 46024870
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||||||| |||||||||| ||||||| |||||    
T  46024818 aatggttttggagtacaactcacaaaaatcatttccacagcaaaatgattttg 46024870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 48830380 - 48830432
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||| ||||||||| |||||||||||||    
T  48830380 aatggttttggagtacaactcacagaaactatttccacatcaaaatggttttg 48830432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27334983 - 27334928
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||| ||||||||| |||||||||||||| ||||||| |||||    
T  27334983 caaaatggttttggagtccaactcacagaaaccatttccacagcaaaatgattttg 27334928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39007233 - 39007178
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||||||||||||| ||||||||||||   |||||||||||||    
T  39007233 caaaatggttttggagtacaactcacataaaccatttccattgcaaaatggttttg 39007178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 6846769 - 6846723
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||    
T  6846769 tttggagtacaactcatagaaaccatttccacagcaaaatggttttg 6846723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 10566191 - 10566141
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||||||||||||||| |||| |||||||||| || ||||||||||||||    
T  10566191 tttggagtacaactcaccaaaatcatttccacagcacaatggttttgacat 10566141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 10569746 - 10569792
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||    
T  10569746 tttggagtacaactcaccaaaaccatttccacagcacaatggttttg 10569792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 26945704 - 26945658
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||||    
T  26945704 tttggagtacaactcacagaaactatttccacagcaaaatggttttg 26945658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 25779497 - 25779546
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtt 53  Q
    ||||| |||||||||||||||| | |||||||||||||| ||||||||||    
T  25779497 aatggttttggagtacaactcatagaaaccatttccacagcaaaatggtt 25779546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 27335023 - 27334971
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| ||| |||||||| ||||| |||||||||||||| |||||||||||||    
T  27335023 aatggttttagagtacaattcacagaaaccatttccacagcaaaatggttttg 27334971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 32091312 - 32091364
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||| ||||||||| ||||||| |||||    
T  32091312 aatggttttggagtacaactcacagaaactatttccacagcaaaatgtttttg 32091364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 33798502 - 33798558
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||| |||||| ||||||||||| ||| |||||||||| ||||||| |||||||||    
T  33798502 aatggttttggaatacaactcacataaatcatttccacagcaaaatgattttgacat 33798558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 42773796 - 42773744
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||| |||||||||| ||||||||||||||| || ||||||||||    
T  42773796 aatggttttggattacaactcaccaaaaccatttccacagcacaatggttttg 42773744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 46346200 - 46346148
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| ||||||||| |||| |||||| ||||||    
T  46346200 aatggttttggagtacaactcacagaaaccattttcacagcaaaatagttttg 46346148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 46346160 - 46346101
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| | |||||||| |||| |||| |||||||||||||  |||||||||||||||||    
T  46346160 caaaatagttttggagtccaacccacagaaaccatttccactgcaaaatggttttgacat 46346101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 34876226 - 34876264
Alignment:
Q  2 aaaatgggtttggagtacaactcacaaaaaccatttcca 40  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  34876226 aaaatggttttggagtacaactcacagaaaccatttcca 34876264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 38837727 - 38837673
Alignment:
Q  2 aaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||| ||||||||| || ||||| |||||||||||| | |||||||||||||    
T  38837727 aaaatggttttggagtataattcacagaaaccatttccaaagcaaaatggttttg 38837673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 7843716 - 7843663
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||  |||| |||| |||||||||||||    
T  7843716 aaatggttttggagtacaactcacagaaattattttcacagcaaaatggttttg 7843663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24360410 - 24360447
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  24360410 caaaatggttttggagtacaactcacagaaaccatttc 24360447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25779361 - 25779398
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  25779361 caaaatggttttggagtacaactcacagaaaccatttc 25779398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 32604907 - 32604854
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| ||||||||| || ||||| |||||||||||| | |||||||||||||    
T  32604907 aaatggttttggagtataattcacagaaaccatttccaaagcaaaatggttttg 32604854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 45478361 - 45478414
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||| ||||||||||||| ||||||||| |||| |||||| ||||||    
T  45478361 aaatggttttgaagtacaactcacagaaaccattttcacagcaaaatagttttg 45478414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 48830244 - 48830281
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  48830244 caaaatggttttggagtacaactcacagaaaccatttc 48830281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 6620666 - 6620718
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||| ||||| ||||||| |||| |||||||||||||| ||||||| ||||    
T  6620666 aaatggttttggggtacaacacacagaaaccatttccacagcaaaatgatttt 6620718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 23174669 - 23174606
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  23174669 caaaatgggtttggagtacaactcacagaaaccatttccacaacaaaatggttttggcattccg 23174606  T

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Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 23174800 - 23174737
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  23174800 caaaatgggtttggagtacaactcacagaaaccatttccacaacaaaatggttttggcattccg 23174737  T

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Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2741553 - 2741605
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtt 53  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  2741553 caaaatgggtttggagtacaactcacagaaaccatttccactacaaaatggtt 2741605  T

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Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 23319291 - 23319239
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  23319291 aatggttttggagtacaactcacagaaaccatttccacaacaaaatggttttg 23319239  T

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Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 37642898 - 37642954
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  37642898 aatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttgacat 37642954  T

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Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 23921201 - 23921142
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattcc 63  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  23921201 aatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttggcattcc 23921142  T

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Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23921379 - 23921324
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||| |||||||||||||||||||||||||||| |||||||||||||    
T  23921379 caaaatggttttgaagtacaactcacaaaaaccatttccacagcaaaatggttttg 23921324  T

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Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 17893263 - 17893217
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  17893263 tttggagtacaactcacaaaaactatttccacaacaaaatggttttg 17893217  T

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Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 18928832 - 18928878
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  18928832 tttggagtacaactcacagaaaccatttccacaacaaaatggttttg 18928878  T

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Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 31763821 - 31763875
Alignment:
Q  2 aaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||||||||||||    
T  31763821 aaaatggttttggagtacaactcacaaaaaccatttccacagtaaaatggttttg 31763875  T

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Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 35197646 - 35197600
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  35197646 tttggagtacaactcacaaaaaccatttccacagcaaaatggttttg 35197600  T

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Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 45849299 - 45849249
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  45849299 tttggagtacaactaacaaaaaccatttccacagcaaaatggttttgacat 45849249  T

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Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 47693863 - 47693810
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  47693863 aaatggttttggagtacaactcacacaaaccatttccacagcaaaatggttttg 47693810  T

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Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 11354508 - 11354456
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  11354508 aaatggttttggagtacaactcacagaaaccatttccacagcaaaatggtttt 11354456  T

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Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11422357 - 11422417
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacatt 61  Q
    ||||||||||||||||||||||||||| |||||| ||||||| ||||||| ||||| ||||    
T  11422357 caaaatgggtttggagtacaactcacacaaaccacttccacatcaaaatgattttggcatt 11422417  T

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Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 16116473 - 16116525
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||| |||||    
T  16116473 aatggttttggagtacaactcacagaaaccatttccacaacaaaatgattttg 16116525  T

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Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 28322663 - 28322611
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  28322663 aatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttg 28322611  T

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Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 51801104 - 51801052
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  51801104 aatggttttggagtacaactcacaaaagccatttccacagcaaaatggttttg 51801052  T

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Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 20506572 - 20506521
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  20506572 aatggttttggagtacaactcacataaaccatttccacagcaaaatggtttt 20506521  T

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Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20506750 - 20506695
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| ||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  20506750 caaaatggattttgagtacaacacacataaaccatttccacaacaaaatggttttg 20506695  T

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Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31084003 - 31084058
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| ||||||||||||| |||| |||||||||||||| |||||||||||||    
T  31084003 caaaatggttttggagtacaacacacagaaaccatttccacagcaaaatggttttg 31084058  T

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Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 46590756 - 46590705
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttt 54  Q
    |||||| |||| ||||||||||||||||| ||||||||||||||||||||||    
T  46590756 aaatggttttgaagtacaactcacaaaaatcatttccacaacaaaatggttt 46590705  T

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Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 180493 - 180555
Alignment:
Q  2 aaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    |||||||||||||||||||||||| | |||| |||||||||  |||||||||||| |||||||    
T  180493 aaaatgggtttggagtacaactcatagaaacaatttccacagaaaaatggttttggcattccg 180555  T

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Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 17811137 - 17811183
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  17811137 tttggagtacaactcacaaaaaccattttcacagcaaaatggttttg 17811183  T

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Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 21256097 - 21256051
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  21256097 tttggagtacaactcacagaaaccatttccacagcaaaatggttttg 21256051  T

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Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 31084189 - 31084235
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  31084189 tttggagtacaactcacataaaccatttccacagcaaaatggttttg 31084235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 35197470 - 35197424
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||    
T  35197470 tttggagtacaactcacagaaaccatttccacaacaagatggttttg 35197424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 44687914 - 44687868
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||    
T  44687914 tttgaagtacaactcacataaaccatttccacaacaaaatggttttg 44687868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 45890391 - 45890437
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  45890391 tttggagtacaactcacataaaccatttccacagcaaaatggttttg 45890437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 14229358 - 14229305
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||| |||||    
T  14229358 aaatggttttggagtacaactcacagaaaccatttccacatcaaaatgattttg 14229305  T

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Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 18057583 - 18057628
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  18057583 tttggagtacaactcacagaaaccatttccacagcaaaatggtttt 18057628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 24368462 - 24368515
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  24368462 aaatggttttgaagtacaactcacaaaaatcattttcacaacaaaatggttttg 24368515  T

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Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 32595151 - 32595204
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||||||||||||  |||||||||||||    
T  32595151 aaatggttttggagtacaactcacagaaaccatttccacggcaaaatggttttg 32595204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 2741513 - 2741565
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||| ||||    
T  2741513 aatggttttggagtacaactcacagaaaccatttccacagcaaaatgggtttg 2741565  T

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Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 12070607 - 12070555
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||| ||||    
T  12070607 aaatggttttggagtacaactcacagaaaccatttccacagcaaaatgatttt 12070555  T

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Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 19850655 - 19850707
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| ||||||||||||||||| ||||||||||||||| || ||||||||||    
T  19850655 aatggttttggagtacaactcaccaaaaccatttccacagcacaatggttttg 19850707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 30788784 - 30788836
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  30788784 aatggttttggagtacaactcacagaaaccattttcacagcaaaatggttttg 30788836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 31529051 - 31528999
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| ||||||||||||||  ||||||||||||    
T  31529051 aatggttttggagtacaactcacataaaccatttccacagaaaaatggttttg 31528999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 44261083 - 44261135
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||||||||||    
T  44261083 aatggttttggagtacgagtcacagaaaccatttccacaacaaaatggttttg 44261135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 180632 - 180695
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||| |||||||||  |||  ||| |||||||| |||||||    
T  180632 caaaatgggtttggagtacaactcacagaaaccatttttacagaaaactggttttggcattccg 180695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19216602 - 19216657
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||| ||||||||| |||||||||||||  |||||||||||||    
T  19216602 caaaatggttttggagtccaactcacagaaaccatttccactgcaaaatggttttg 19216657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28322623 - 28322568
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||| ||||||||| |||||||||||||  |||||||||||||    
T  28322623 caaaatggttttggagtccaactcacagaaaccatttccactgcaaaatggttttg 28322568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44261123 - 44261178
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||| ||||||||| |||||||||||||  |||||||||||||    
T  44261123 caaaatggttttggagtccaactcacagaaaccatttccactgcaaaatggttttg 44261178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44687837 - 44687782
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| | |||||||| |||||||||||||||||||||||  |||||||||||||    
T  44687837 caaaatagttttggagtccaactcacaaaaaccatttccactgcaaaatggttttg 44687782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30788824 - 30788878
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||||| |||||||| ||||||||||||||||||| |||  ||||||||||||    
T  30788824 caaaatggttttggagtccaactcacaaaaaccattttcactgcaaaatggtttt 30788878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 33157045 - 33157091
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||    
T  33157045 tttggagtacaactcacagaaaccatttccacaggaaaatggttttg 33157091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 9041048 - 9040991
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| |||||||||||| ||| | ||||||||||||||  ||||||||||||||||    
T  9041048 aaatggttttggagtacaattcatagaaaccatttccacagtaaaatggttttgacat 9040991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 16116655 - 16116700
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||    
T  16116655 tttggagtacaactcacagaaaccattttcacatcaaaatggtttt 16116700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 18952583 - 18952530
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| ||||||||||||||  |||||| |||||    
T  18952583 aaatggttttggagtacaactcacagaaaccatttccacagtaaaatgattttg 18952530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 23277406 - 23277353
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| ||| ||||||||| |||| ||||| ||||||||||||||||||||||    
T  23277406 aaatggtttttgagtacaacacacagaaaccgtttccacaacaaaatggttttg 23277353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 29945264 - 29945317
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||||||||  ||| |||||||||||||    
T  29945264 aaatggttttggagtacaactcacagaaaccatttttacagcaaaatggttttg 29945317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 30802979 - 30803023
Alignment:
Q  12 tggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||    
T  30802979 tggagtacaactcacataaaccatttccacagcaaaatgattttg 30803023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 33097816 - 33097868
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||| ||||||||| |||||||||||||| ||||||| |||||    
T  33097816 aatggttttggagtccaactcacagaaaccatttccacagcaaaatgattttg 33097868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 35754616 - 35754668
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||| |||||||||||||| ||| ||| |||||||||| ||||||||||||    
T  35754616 aaatggttttggagtacaacttacagaaatcatttccacagcaaaatggtttt 35754668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 51420862 - 51420914
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||| ||||||||| |||||||||||||| ||||||| |||||    
T  51420862 aatggttttggagtgcaactcacagaaaccatttccacagcaaaatgattttg 51420914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 51801064 - 51801012
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtt 53  Q
    |||||||| |||||||| ||||||||| |||||||||||||  ||||||||||    
T  51801064 caaaatggttttggagtccaactcacagaaaccatttccactgcaaaatggtt 51801012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 31529010 - 31528959
Alignment:
Q  2 aaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtt 53  Q
    ||||||| |||||||| ||||||||| |||||||||||||  ||||||||||    
T  31529010 aaaatggttttggagtccaactcacagaaaccatttccactgcaaaatggtt 31528959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 1395218 - 1395264
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||| ||||||||| ||||||| |||||    
T  1395218 tttggagtacaactcacagaaactatttccacagcaaaatgattttg 1395264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 9628589 - 9628547
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggt 52  Q
    |||||||||||||||||| ||||||||||||||  ||||||||    
T  9628589 tttggagtacaactcacagaaaccatttccacagtaaaatggt 9628547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 10498040 - 10498090
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||||||||||||||   || ||||||||||| |||||||||||||||||    
T  10498040 tttggagtacaactcattgaagccatttccacagcaaaatggttttgacat 10498090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 19216568 - 19216614
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| || | ||||||||| |||||||||||||    
T  19216568 tttggagtacaactcacagaagcaatttccacagcaaaatggttttg 19216614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 32143758 - 32143708
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||||||||| ||||| ||| ||||||||||  ||||||||||||||||    
T  32143758 tttggagtacaattcacagaaatcatttccacagtaaaatggttttgacat 32143708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 51904872 - 51904822
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||||||||| ||||| ||| ||||||||||  ||||||||||||||||    
T  51904872 tttggagtacaattcacagaaatcatttccacagtaaaatggttttgacat 51904822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10497898 - 10497935
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  10497898 caaaatggttttggagtacaactcacagaaaccatttc 10497935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 14389891 - 14389944
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| ||||||||| |||||||| ||||||||||||   |||||||||||||    
T  14389891 aaatggttttggagtataactcacagaaaccatttccaaggcaaaatggttttg 14389944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20506707 - 20506670
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  20506707 caaaatggttttggagtacaactcacataaaccatttc 20506670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 21256238 - 21256201
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  21256238 caaaatggttttggagtacaactcacagaaaccatttc 21256201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23277365 - 23277328
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  23277365 caaaatggttttggagtacaactcacagaaaccatttc 23277328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23921336 - 23921299
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  23921336 caaaatggttttggagtacaactcacagaaaccatttc 23921299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31084046 - 31084083
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  31084046 caaaatggttttggagtacaactcacagaaaccatttc 31084083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 37642763 - 37642800
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  37642763 caaaatggttttggagtacaactcacagaaaccatttc 37642800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10497857 - 10497910
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||||||||  ||| ||| |||||||||| |||||||||||||    
T  10497857 caaaatggttttggagtacaac--acagaaatcatttccacagcaaaatggttttg 10497910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 11354398 - 11354370
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttc 38  Q
    |||||||||||||||||||||||||||||    
T  11354398 tttggagtacaactcacaaaaaccatttc 11354370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6301 - 6364
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||    
T  6301 caaaatgggtttggagtacaactcacagaaaccatttccacagcaaaatggttttggcattccg 6364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 24593 - 24530
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||    
T  24593 caaaatgggtttggagtacaactcacagaaaccatttccacagcaaaatggttttggcattccg 24530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7058962 - 7059025
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||    
T  7058962 caaaatgggtttggagtacaactcacagaaaccatttccatagcaaaatggttttgacattccg 7059025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1209575 - 1209638
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| |||||||    
T  1209575 caaaatgggtttggagtacaactcacagaaatcatttccacagcaaaatggttttggcattccg 1209638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 185928 - 185981
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  185928 aaatggttttggagtacaactcacagaaaccatttccacaacaaaatggttttg 185981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 10586058 - 10586005
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  10586058 aaatggttttggagtacaactcacagaaaccatttccacaacaaaatggttttg 10586005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 24473241 - 24473185
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  24473241 aatggttttggagtacaactcacaacaaccatttccacatcaaaatggttttgacat 24473185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 1773286 - 1773233
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  1773286 aaatggttttggagtacaactcacaaaaaccatttccacagcaaaatgattttg 1773233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 5106732 - 5106675
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| ||| || |||||||||||||||||||||||||| |||||||||||||||||    
T  5106732 aaatggttttagaatacaactcacaaaaaccatttccacagcaaaatggttttgacat 5106675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 17656665 - 17656718
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  17656665 aaatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttg 17656718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 34343296 - 34343349
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||| |||||||||||||||||||||||||||| |||||||||||||    
T  34343296 aaatggttttgaagtacaactcacaaaaaccatttccacagcaaaatggttttg 34343349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 23397224 - 23397276
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  23397224 aatggttttggagtacaactcacagaaaccatttccacatcaaaatggttttg 23397276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4835931 - 4835868
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||| ||||||||||||||||| | ||||||||||||||  |||||||||||| |||||||    
T  4835931 caaaatgagtttggagtacaactcatagaaaccatttccacagaaaaatggttttggcattccg 4835868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4841376 - 4841313
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||| ||||||||||||||||| | ||||||||||||||  |||||||||||| |||||||    
T  4841376 caaaatgagtttggagtacaactcatagaaaccatttccacagaaaaatggttttggcattccg 4841313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 35301892 - 35301841
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  35301892 aatggttttggagtacaactcacataaaccatttccacagcaaaatggtttt 35301841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 42434363 - 42434406
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggtt 53  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  42434363 tttggagtacaactcacataaaccatttccacaacaaaatggtt 42434406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 9853043 - 9853089
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  9853043 tttggagtacaactcacaaaaaccatttccacagcaaaatgattttg 9853089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 1672184 - 1672229
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  1672184 tttggagtacaactcacagaaaccatttccacagcaaaatggtttt 1672229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 27506903 - 27506850
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||| ||||||||| |||||||||||||    
T  27506903 aaatggttttggagtacaactcacagaaactatttccacagcaaaatggttttg 27506850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 32644244 - 32644187
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| |||||||||||||||||| ||| |||||||||| |||||| ||||||||||    
T  32644244 aaatggttttggagtacaactcacagaaatcatttccacagcaaaatagttttgacat 32644187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9852837 - 9852892
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| ||||||||||||| |||| |||||||||||||| ||||||| |||||    
T  9852837 caaaatggttttggagtacaacacacagaaaccatttccacagcaaaatgattttg 9852892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13526237 - 13526182
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||| ||||||||| |||||||||||||  |||||||||||||    
T  13526237 caaaatggttttggagtccaactcacagaaaccatttccactgcaaaatggttttg 13526182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 13526276 - 13526225
Alignment:
Q  5 atgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||| |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  13526276 atggttttggagtacaactcacagaaaccattttcacagcaaaatggttttg 13526225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13615772 - 13615717
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||| ||||||||| |||||||||||||  |||||||||||||    
T  13615772 caaaatggttttggagtccaactcacagaaaccatttccactgcaaaatggttttg 13615717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 13615811 - 13615760
Alignment:
Q  5 atgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||| |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  13615811 atggttttggagtacaactcacagaaaccattttcacagcaaaatggttttg 13615760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 2523557 - 2523603
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||    
T  2523557 tttggagtacaactcacataaaccatttccactccaaaatggttttg 2523603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 40022645 - 40022599
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||||||||||||| ||||||| |||||    
T  40022645 tttggagtacaactcacagaaaccatttccacagcaaaatgattttg 40022599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 40246642 - 40246596
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||    
T  40246642 tttggagtacaactcacagaaaccatttccactgcaaaatggttttg 40246596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 23504690 - 23504637
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| || |||||| |||| |||||||||||||    
T  23504690 aaatggttttggagtacaactcacagaatccattttcacagcaaaatggttttg 23504637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 35448281 - 35448334
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| | |||||||||||||||| ||| |||||||||| |||||||||||||    
T  35448281 aaatggttatggagtacaactcacagaaatcatttccacagcaaaatggttttg 35448334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4835788 - 4835723
Alignment:
Q  1 caaaatgggtttggagtacaactcacaa----aaaccatttccacaacaaaatggttttgacattc 62  Q
    |||||||||||||||||||||||||||     ||||||||||||||  |||||||||||| |||||    
T  4835788 caaaatgggtttggagtacaactcacatgcataaaccatttccacagaaaaatggttttggcattc 4835723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4841233 - 4841168
Alignment:
Q  1 caaaatgggtttggagtacaactcacaa----aaaccatttccacaacaaaatggttttgacattc 62  Q
    |||||||||||||||||||||||||||     ||||||||||||||  |||||||||||| |||||    
T  4841233 caaaatgggtttggagtacaactcacatgcataaaccatttccacagaaaaatggttttggcattc 4841168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 18026930 - 18026982
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||| ||||||||| ||||||||| |||| |||||||||||||    
T  18026930 aatggttttggagtccaactcacagaaaccattttcacagcaaaatggttttg 18026982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12356129 - 12356184
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||| ||||||||| ||||||||| |||  |||||||||||||    
T  12356129 caaaatggttttggagtccaactcacagaaaccattttcactgcaaaatggttttg 12356184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 23397049 - 23397104
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| ||||||||||||| || | ||||||||| |||| |||||||||||||    
T  23397049 caaaatggttttggagtacaacacatagaaaccattttcacagcaaaatggttttg 23397104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 28698132 - 28698089
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggtt 53  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||    
T  28698132 tttggagtccaactcacagaaaccatttccactacaaaatggtt 28698089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30652400 - 30652454
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| ||||||||||||| |||| |||||||||||||  |||||||||||||    
T  30652400 caaaatggttttggagtacaacacacagaaaccatttccac-gcaaaatggttttg 30652454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 34647433 - 34647382
Alignment:
Q  5 atgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||| |||||||||||||| ||| |||||||||||||| ||||||| |||||    
T  34647433 atggttttggagtacaacttacataaaccatttccacagcaaaatgattttg 34647382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34647613 - 34647558
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| ||||||||| ||  |||| |||||||||||||| |||||||||||||    
T  34647613 caaaatggttttggagtataatacacagaaaccatttccacagcaaaatggttttg 34647558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 39022768 - 39022811
Alignment:
Q  14 gagtacaactcacaaaaaccatttccacaacaaaatggttttga 57  Q
    |||||||||||||| |||||||||||||| |||||| |||||||    
T  39022768 gagtacaactcacagaaaccatttccacagcaaaatagttttga 39022811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 6783487 - 6783533
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||| |||| |||| |||||||||||||    
T  6783487 tttggagtacaactcacagaaactattttcacagcaaaatggttttg 6783533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 17792882 - 17792836
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| ||| ||||| |||| |||||||||||||    
T  17792882 tttggagtacaactcacagaaatcatttacacagcaaaatggttttg 17792836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 18161343 - 18161389
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||| ||||| ||||||||||||||  ||||||||||||    
T  18161343 tttggagtacaaatcacagaaaccatttccacagtaaaatggttttg 18161389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 2541186 - 2541134
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  2541186 aaatggttttggagtacaactcacagaaacc-tttccacagtaaaatggttttg 2541134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 8439173 - 8439132
Alignment:
Q  15 agtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||||||||| ||| |||||||||| |||||||||||||    
T  8439173 agtacaactcacataaatcatttccacagcaaaatggttttg 8439132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 15260128 - 15260083
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||| ||||||||||| ||||||||| |||| ||||||||||||    
T  15260128 tttggattacaactcacataaaccattttcacagcaaaatggtttt 15260083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 23940803 - 23940758
Alignment:
Q  11 ttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||||||||||| | ||||||||| |||| |||||||||||||    
T  23940803 ttggagtacaactcatagaaaccattttcacagcaaaatggttttg 23940758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 30652368 - 30652412
Alignment:
Q  11 ttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||| |||||| |||||||||||||| |||||||||||||    
T  30652368 ttggagtaca-ctcacagaaaccatttccacatcaaaatggttttg 30652412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 34647570 - 34647533
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  34647570 caaaatggttttggagtacaactcacagaaaccatttc 34647533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 40022787 - 40022750
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  40022787 caaaatggttttggagtacaactcacagaaaccatttc 40022750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 1773164 - 1773136
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttc 38  Q
    |||||||||||||||||||||||||||||    
T  1773164 tttggagtacaactcacaaaaaccatttc 1773136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 45409738 - 45409698
Alignment:
Q  20 aactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||||||||| ||||| ||||||||||| ||||||||||    
T  45409738 aactcacaaaaatcattttcacaacaaaatagttttgacat 45409698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10473294 - 10473357
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||    
T  10473294 caaaatgggtttggagtacaactcacagaaaccatttccacagcaaaatggttttggcattccg 10473357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 16475017 - 16474960
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16475017 aaatggttttggagtacaactcacagaaaccatttccacaacaaaatggttttgacat 16474960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 38010498 - 38010550
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38010498 aatggttttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 38010550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 638771 - 638834
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    |||||||||||||||||||||||||||||||||||||||| |  |||||||||||| |||||||    
T  638771 caaaatgggtttggagtacaactcacaaaaaccatttccatagaaaaatggttttggcattccg 638834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10473425 - 10473488
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||| |||||| |||||||    
T  10473425 caaaatgggtttggagtacaactcacagaaactatttccacaacaaaatagttttggcattccg 10473488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 25573731 - 25573687
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttt 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  25573731 tttggagtacaactcacaaaaaccatttccacaacaaaatggttt 25573687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25573697 - 25573642
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| || ||||||||||||||| ||||||||||||||||||||||||||||    
T  25573697 caaaatggtttaggagtacaactcacagaaaccatttccacaacaaaatggttttg 25573642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26577522 - 26577471
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggt 52  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  26577522 caaaatgggtttggattacaactcacagaaaccatttccacaacaaaatggt 26577471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38245700 - 38245763
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||||| |||||||    
T  38245700 caaaatgggtttgtagtacaactcacagaaaccatttacacagcaaaatggttttggcattccg 38245763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 45256665 - 45256728
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||||| |||||||    
T  45256665 caaaatgggtttggaatacaactcacataaaccatttctacagcaaaatggttttggcattccg 45256728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 8157279 - 8157233
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  8157279 tttggagtacaactcacagaaaccatttccacaacaaaatggttttg 8157233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 36924295 - 36924345
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  36924295 tttggagtacaactcacagaaaccatttccacagcaaaatggttttgacat 36924345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 50644484 - 50644542
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattc 62  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||| |||||    
T  50644484 aatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttggcattc 50644542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 12722935 - 12722882
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  12722935 aaatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttg 12722882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 21995717 - 21995770
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  21995717 aaatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttg 21995770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 31763105 - 31763052
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  31763105 aaatggttttggagtacaactcacagaaaccatttccacaccaaaatggttttg 31763052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 37059912 - 37059859
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  37059912 aaatggttttggagtacaactcacaaaaaccatttccacagcaaaatagttttg 37059859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 54895451 - 54895504
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  54895451 aaatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttg 54895504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 1728884 - 1728828
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||| ||| |||||||||||| |||||||||||||||||||||||| |||||||||    
T  1728884 aatggttttcgagtacaactcataaaaaccatttccacaacaaaatgattttgacat 1728828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 21097900 - 21097952
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  21097900 aatggttttggagtacaactcacataaaccatttccacatcaaaatggttttg 21097952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 30358618 - 30358674
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||| ||| |||||||||||||| |||||||||||||| |||||||||||||||||    
T  30358618 aatggttttagagtacaactcacagaaaccatttccacagcaaaatggttttgacat 30358674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6385792 - 6385737
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||    
T  6385792 caaaatggttttggagtccaactcacagaaaccatttccacagcaaaatggttttg 6385737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17109918 - 17109863
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||  |||||||||||||||||| |||||||||||||| |||||||||||||    
T  17109918 caaaatgattttggagtacaactcacagaaaccatttccacagcaaaatggttttg 17109863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 22180481 - 22180430
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  22180481 aatggttttggagtacaactcacataaaccatttccacagcaaaatggtttt 22180430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25573654 - 25573599
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||    
T  25573654 caaaatggttttggagtccaactcacagaaaccatttccacagcaaaatggttttg 25573599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29826146 - 29826091
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| ||||||||||||| |||| |||||||||||||| |||||||||||||    
T  29826146 caaaatggttttggagtacaacacacagaaaccatttccacagcaaaatggttttg 29826091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 49137391 - 49137340
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  49137391 aatggttttggagtacaactcacataaaccatttccacagcaaaatggtttt 49137340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49137569 - 49137514
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| || |||||||||| |||| ||||||||||||||||||||||||||||    
T  49137569 caaaatggtttcggagtacaacacacagaaaccatttccacaacaaaatggttttg 49137514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 27765053 - 27765099
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  27765053 tttggagtacaactcacacaaaccatttccacagcaaaatggttttg 27765099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 36309470 - 36309520
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  36309470 tttggagtacaactcacataaatcatttccacagcaaaatggttttgacat 36309520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 36621228 - 36621178
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  36621228 tttggagtataactcacaaaaatcatttccacagcaaaatggttttgacat 36621178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 1492719 - 1492776
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| |||||||||||||||||| |||||||||||| |  ||||||||||||||||    
T  1492719 aaatggttttggagtacaactcacagaaaccatttccatagtaaaatggttttgacat 1492776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 24687031 - 24687084
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttga 57  Q
    ||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  24687031 aatggttttgaagtacaaatcacaaaaaccatttccacagcaaaatggttttga 24687084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 43374494 - 43374547
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||||||||||| | |||||||||||||    
T  43374494 aaatggttttggagtacaactcacataaaccatttccatagcaaaatggttttg 43374547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 6385832 - 6385780
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||| | |||||||||||||| |||||||||||||    
T  6385832 aatggttttggagtacaactcatagaaaccatttccacagcaaaatggttttg 6385780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 8166075 - 8166023
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||| |||||    
T  8166075 aaatggttttggagtacaactcacagaaaccatttccacagcaaaatagtttt 8166023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 9553124 - 9553072
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||| |||||    
T  9553124 aatggttttggagtacaactcacagaaaccatttccacagcaaaatgattttg 9553072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1729063 - 1729008
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| ||||||||||||| |||| ||| |||||||||| |||||||||||||    
T  1729063 caaaatggttttggagtacaacacacagaaatcatttccacagcaaaatggttttg 1729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 30358404 - 30358451
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaa 48  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||    
T  30358404 caaaatggttttggagtacaacacacagaaaccatttccacaacaaaa 30358451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 33883481 - 33883427
Alignment:
Q  2 aaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||| |||||||||||||||||| ||||||||||||||  |||||| |||||    
T  33883481 aaaatggttttggagtacaactcacataaaccatttccacagtaaaatgattttg 33883427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 48077363 - 48077313
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||| |||||||||||| |||||||||||||| ||||||| |||||||||    
T  48077363 tttggtgtacaactcacagaaaccatttccacagcaaaatgattttgacat 48077313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 50562941 - 50562895
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  50562941 tttggagtacaactcacagaaaccatttacacagcaaaatggttttg 50562895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 2124542 - 2124489
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| ||||||||| |||||||| |||||||||||||| ||||||| |||||    
T  2124542 aaatggttttggagtaaaactcacagaaaccatttccacagcaaaatgattttg 2124489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 6768450 - 6768507
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| |||||||||||||||| | ||||||||| |||| |||||| ||||||||||    
T  6768450 aaatggttttggagtacaactcatagaaaccattttcacagcaaaatagttttgacat 6768507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 6842018 - 6841965
Alignment:
Q  2 aaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    ||||||| |||||||||||||| ||| ||||||||||||||  |||||||||||    
T  6842018 aaaatggttttggagtacaacttacagaaaccatttccacagtaaaatggtttt 6841965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 29825967 - 29825918
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtt 53  Q
    ||||| ||||||||| |||||||| |||||||||||||| ||||||||||    
T  29825967 aatggttttggagtagaactcacagaaaccatttccacagcaaaatggtt 29825918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 18924045 - 18924097
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||| ||||||||||||| |||| ||||||||| |||||||||||||    
T  18924045 aatggttttgaagtacaactcacagaaacaatttccacagcaaaatggttttg 18924097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 8165958 - 8165907
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    ||||| |||||| ||||||||||| |||||||||||||| |||||| |||||    
T  8165958 aatggttttggaatacaactcacagaaaccatttccacagcaaaatagtttt 8165907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 43852207 - 43852156
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    ||||| |||||||||||||||||| |||||| ||||||| ||||||| ||||    
T  43852207 aatggttttggagtacaactcacagaaaccaattccacagcaaaatgatttt 43852156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50644304 - 50644359
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| ||||||||  |||||||| ||| |||||||||| |||||||||||||    
T  50644304 caaaatggttttggagtgtaactcacataaatcatttccacagcaaaatggttttg 50644359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 10374097 - 10374143
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| ||||||||| |||  |||||||||||||    
T  10374097 tttggagtacaactcacagaaaccattttcacggcaaaatggttttg 10374143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 31763009 - 31762975
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttc 38  Q
    ||||| |||||||||||||||||||||||||||||    
T  31763009 aatggttttggagtacaactcacaaaaaccatttc 31762975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 47567950 - 47568000
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||||||||| ||||| |||||||||||| |  ||||||||||||||||    
T  47567950 tttggagtacaattcacagaaaccatttccatagtaaaatggttttgacat 47568000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 52325158 - 52325207
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||| ||||||| ||||| |||||||||||||| |||||||||||||||||    
T  52325158 tttgaagtacaa-tcacagaaaccatttccacagcaaaatggttttgacat 52325207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 1729020 - 1728983
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  1729020 caaaatggttttggagtacaactcacataaaccatttc 1728983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 9967867 - 9967814
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||| ||||| |||||||||||| |  ||||||||||||    
T  9967867 aaatggttttggagtacaattcacagaaaccatttccatagtaaaatggttttg 9967814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 16299339 - 16299384
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||| ||||||||||||| |||||||||||||| ||||||| ||||    
T  16299339 tttgaagtacaactcacagaaaccatttccacatcaaaatgatttt 16299384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29826103 - 29826066
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  29826103 caaaatggttttggagtacaactcacagaaaccatttc 29826066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38010538 - 38010575
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  38010538 caaaatggttttggagtacaactcacagaaaccatttc 38010575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 49137526 - 49137489
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  49137526 caaaatggttttggagtacaactcacataaaccatttc 49137489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 50644347 - 50644384
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  50644347 caaaatggttttggagtacaactcacagaaaccatttc 50644384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 53865111 - 53865164
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| ||||||||||||||||| ||||||||||  | | |||||||||||||    
T  53865111 aaatggttttggagtacaactcacgaaaaccatttttatagcaaaatggttttg 53865164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 4169187 - 4169239
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||| | ||||||||||| |||||||||||||| |||||| ||||||    
T  4169187 aatggttttgtactacaactcacagaaaccatttccacagcaaaatagttttg 4169239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16299373 - 16299425
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtt 53  Q
    |||||||  ||| |||||||||||||| |||||||||||||  ||||||||||    
T  16299373 caaaatgattttagagtacaactcacagaaaccatttccactgcaaaatggtt 16299425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20862153 - 20862206
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||||  || |||  ||||||||||||||||||||||||||||    
T  20862153 caaaatggttttggagta--acacacggaaaccatttccacaacaaaatggttttg 20862206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24687071 - 24687127
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttga 57  Q
    |||||||| |||| ||| ||||||||| |||||||||||||  |||||| |||||||    
T  24687071 caaaatggttttgaagttcaactcacagaaaccatttccactgcaaaatagttttga 24687127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 33883368 - 33883340
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttc 38  Q
    |||||||||||||||||||||||||||||    
T  33883368 tttggagtacaactcacaaaaaccatttc 33883340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 39086564 - 39086617
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39086564 aaatggttttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 39086617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28069497 - 28069437
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacatt 61  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||    
T  28069497 caaaatgggtttggagtacaactcacagaaaccatttccacagcaaaatggttttggcatt 28069437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 34329969 - 34330031
Alignment:
Q  2 aaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||||||||||| |||||||    
T  34329969 aaaatgggtttggagtacaactcacaaaaattatttccacagcaaaatggttttggcattccg 34330031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2826291 - 2826228
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    |||||||| |||||||||||||||||| |||| ||||||||| ||||||||||||| |||||||    
T  2826291 caaaatggatttggagtacaactcacagaaactatttccacagcaaaatggttttggcattccg 2826228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 8949475 - 8949521
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  8949475 tttggagtacaactcacaaaaaccatttccacagcaaaatggttttg 8949521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 11660979 - 11660922
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| |||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  11660979 aaatggttttggaatacaactcacagaaaccatttccacagcaaaatggttttgacat 11660922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 23155689 - 23155742
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  23155689 aaatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttg 23155742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 39861777 - 39861720
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| |||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  39861777 aaatggttttggagtacaactcacataaatcatttccacagcaaaatggttttgacat 39861720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 4675494 - 4675546
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  4675494 aatggttttggagtacaactcacataaaccatttccacaacaaaattgttttg 4675546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 23334986 - 23334934
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  23334986 aatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttg 23334934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 16668273 - 16668227
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||||||||||||||| || |||||||||||||    
T  16668273 tttggagtacaactcacaaaaaccatttcctcagcaaaatggttttg 16668227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 33857533 - 33857487
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  33857533 tttggagtacaattcacagaaaccatttccacaacaaaatggttttg 33857487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 15059480 - 15059533
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||| ||||||||| |||||||||||||    
T  15059480 aaatggttttggagtacaactcacagaaactatttccacagcaaaatggttttg 15059533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 23155572 - 23155629
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| |||||||||||||||||| ||||||||| |||| ||||||| |||||||||    
T  23155572 aaatggttttggagtacaactcacagaaaccattttcacagcaaaatgattttgacat 23155629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 42746566 - 42746619
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||| ||||||||| |||||||||||||    
T  42746566 aaatggttttggagtacaactcacataaactatttccacagcaaaatggttttg 42746619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 33868751 - 33868803
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| ||| |||||||||| |||||||||||||    
T  33868751 aatggttttggagtacaactcacataaatcatttccacagcaaaatggttttg 33868803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 703908 - 703862
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||    
T  703908 tttggaatacaactcacaaaaaccatttccacagtaaaatggttttg 703862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 11376571 - 11376525
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||| |||||||||| |||||||||||||| |||||||||||||    
T  11376571 tttggagaacaactcacagaaaccatttccacagcaaaatggttttg 11376525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 20134396 - 20134346
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtt 53  Q
    |||||| |||||||||||||||||| ||| |||||||||| ||||||||||    
T  20134396 aaatggttttggagtacaactcacataaatcatttccacagcaaaatggtt 20134346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 22671850 - 22671896
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||    
T  22671850 tttggagtacaactcatagaaaccatttccacagcaaaatggttttg 22671896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 22830642 - 22830688
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| ||||||||||||||| |||||| |||||    
T  22830642 tttggagtacaactcacataaaccatttccacaaaaaaatgattttg 22830688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 42746688 - 42746738
Alignment:
Q  5 atgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||| |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  42746688 atggttttggagtacaactcacataaactatttccacagcaaaatggtttt 42746738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 35915889 - 35915934
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||    
T  35915889 tttggagtacaactcacagaaaccatttccactgcaaaatggtttt 35915934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4675534 - 4675587
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| | ||||||||||||||||||||  ||||||||||| |||||||||||||    
T  4675534 caaaattgttttggagtacaactcacaaa--ccatttccacagcaaaatggttttg 4675587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 25191906 - 25191854
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| ||||| ||||||||||| ||||||||||||||| || ||||||||||    
T  25191906 aatggttttggtgtacaactcaccaaaaccatttccacatcacaatggttttg 25191854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 39166337 - 39166285
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||| ||||||||| |||||||| |||||||||||| | ||||||||||||    
T  39166337 aaatggttttggagtataactcacagaaaccatttccatagcaaaatggtttt 39166285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 11660873 - 11660839
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttc 38  Q
    ||||| |||||||||||||||||||||||||||||    
T  11660873 aatggttttggagtacaactcacaaaaaccatttc 11660839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 33868791 - 33868825
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccat 35  Q
    |||||||| ||||||||||||||||||||||||||    
T  33868791 caaaatggttttggagtacaactcacaaaaaccat 33868825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8949509 - 8949546
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  8949509 caaaatggttttggagtacaactcacagaaaccatttc 8949546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16668239 - 16668202
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  16668239 caaaatggttttggagtacaactcacagaaaccatttc 16668202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 36864114 - 36864167
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||| ||||||||||| |||| ||||||||| |||||| ||||||    
T  36864114 aaatggttttggaatacaactcacagaaactatttccacagcaaaatagttttg 36864167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 703804 - 703776
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttc 38  Q
    |||||||||||||||||||||||||||||    
T  703804 tttggagtacaactcacaaaaaccatttc 703776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 16668103 - 16668047
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||| ||| |||||||||||||| ||| |||||||||   ||||||||||||||||    
T  16668103 aatggttttagagtacaactcacagaaatcatttccacggaaaaatggttttgacat 16668047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 51361780 - 51361717
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||    
T  51361780 caaaatgggtttggagtacaactcagagaaatcatttccacaacaaaatggttttggcattccg 51361717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 52986760 - 52986697
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||| |||||||||||| | ||||||||||||| |||||||    
T  52986760 caaaatgggtttggagtacaactcacagaaaccatttccatagcaaaatggttttggcattccg 52986697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 36185902 - 36185845
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  36185902 aaatggttttggagtacaactcacaaaaaccatttccacagaaaaatggttttgacat 36185845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41191852 - 41191797
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  41191852 caaaatggttttggagtacaacacacagaaaccatttccacaacaaaatggttttg 41191797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 52986891 - 52986828
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||| | ||||||||||||||  |||||||||||| |||||||    
T  52986891 caaaatgggtttggagtacaactcatagaaaccatttccacagtaaaatggttttggcattccg 52986828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 8718901 - 8718947
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  8718901 tttggagtacaactcacagaaaccatttccacaacaaaatggttttg 8718947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 9070788 - 9070834
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  9070788 tttggagtacaactcacagaaaccatttccacaacaaaatggttttg 9070834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 28299608 - 28299556
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||||||    
T  28299608 aatggttttggagtacaactcacggaaaccatttccacaacaaaatggttttg 28299556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 34562662 - 34562606
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||| |||||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  34562662 aatggttttggagtacaactcacataaaccattttcacagcaaaatggttttgacat 34562606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 39194607 - 39194555
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  39194607 aatggttttggagtacaactcacataaaccatttccacatcaaaatggttttg 39194555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28299525 - 28299466
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||||||| |||||||| ||||||||| |||||||||||||  |||||||||||||||||    
T  28299525 caaaatggttttggagtccaactcacagaaaccatttccactgcaaaatggttttgacat 28299466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28299568 - 28299513
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| |||||||||||||||||| |||||||||||| | |||||||||||||    
T  28299568 caaaatggttttggagtacaactcacagaaaccatttccatagcaaaatggttttg 28299513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 31852959 - 31853022
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattccg 64  Q
    ||||||||||||||||||||||||||| ||||||||||||||   ||||| ||||| |||||||    
T  31852959 caaaatgggtttggagtacaactcacagaaaccatttccacagataaatgattttggcattccg 31853022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 7044624 - 7044574
Alignment:
Q  12 tggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattc 62  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  7044624 tggagtacaactcacataaatcattttcacaacaaaatggttttgacattc 7044574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 23755885 - 23755931
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  23755885 tttggagtacaactcacagaaaccatttccacagcaaaatggttttg 23755931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 41191666 - 41191620
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  41191666 tttggagtacaactcacaaaaaccatttccacagcaaaatgattttg 41191620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 53595438 - 53595488
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttt 54  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||    
T  53595438 aatggttttggagtacaactcacagaaaccatttccacagcaaaatggttt 53595488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 16653543 - 16653596
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||| ||||||||||||| |||||||||||||| |||||||||||||    
T  16653543 aaatggttttgaagtacaactcacagaaaccatttccacagcaaaatggttttg 16653596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 19012438 - 19012491
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||| ||||||||||||| |||||||||||||| |||||||||||||    
T  19012438 aaatggttttgaagtacaactcacagaaaccatttccacagcaaaatggttttg 19012491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 19384641 - 19384588
Alignment:
Q  8 ggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacatt 61  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||| ||||    
T  19384641 ggtttggagtacaactcacagaaaccatttccacagaaaaatggttttggcatt 19384588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 27446210 - 27446157
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||| ||||| |||||||||||||| |||||||||||||    
T  27446210 aaatggttttggagtacaattcacagaaaccatttccacagcaaaatggttttg 27446157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 50754838 - 50754899
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattc 62  Q
    ||||||||||||||||||||||||||| |||| ||||||| | | ||||||||||| |||||    
T  50754838 caaaatgggtttggagtacaactcacagaaactatttccatagctaaatggttttggcattc 50754899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 50754969 - 50755030
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacattc 62  Q
    ||||||||||||||||||||||||||| |||| ||||||| | | ||||||||||| |||||    
T  50754969 caaaatgggtttggagtacaactcacagaaactatttccatagctaaatggttttggcattc 50755030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 23756055 - 23756107
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| || ||||||||||| |||||||||||||    
T  23756055 aatggttttggagtacaactcacagaagccatttccacatcaaaatggttttg 23756107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 47728951 - 47729003
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||| | |||||||||||||| |||||||||||||    
T  47728951 aatggttttggagtacaactcatagaaaccatttccacagcaaaatggttttg 47729003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 51681474 - 51681423
Alignment:
Q  5 atgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||| |||||||||||||||||| |||||||||||||| ||||||| |||||    
T  51681474 atggttttggagtacaactcacagaaaccatttccacagcaaaatgattttg 51681423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 53595478 - 53595533
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||| || ||| ||||||||||| |||||||||||||| |||||||||||||    
T  53595478 caaaatggtttcggaatacaactcacagaaaccatttccacatcaaaatggttttg 53595533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 47924356 - 47924310
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||| ||||||||||||| |||||||||||||| |||||||||||||    
T  47924356 tttgcagtacaactcacagaaaccatttccacagcaaaatggttttg 47924310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 49053416 - 49053366
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    |||| ||||||||||||| |||||||||||||| ||||||| |||||||||    
T  49053416 tttgaagtacaactcacagaaaccatttccacagcaaaatgattttgacat 49053366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 8061551 - 8061604
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttga 57  Q
    ||||| ||||||||||||||||| |||||||| |||||| || |||||||||||    
T  8061551 aatggttttggagtacaactcaccaaaaccatctccacagcacaatggttttga 8061604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 12974180 - 12974135
Alignment:
Q  11 ttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||| |||||||||||| |||||||||||||| |||||||||||||    
T  12974180 ttggtgtacaactcacagaaaccatttccacagcaaaatggttttg 12974135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 16276949 - 16276904
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||||||||||||||| |||||||||||||| ||||||| ||||    
T  16276949 tttggagtacaactcacagaaaccatttccacagcaaaatgttttt 16276904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 23699871 - 23699923
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||| ||||||||||| |||||||||||||| || ||||||||||    
T  23699871 aatggttttggaatacaactcacagaaaccatttccacagcagaatggttttg 23699923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 23718326 - 23718378
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||| ||||||||||| |||||||||||||| || ||||||||||    
T  23718326 aatggttttggaatacaactcacagaaaccatttccacagcagaatggttttg 23718378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 23736782 - 23736834
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||| ||||||||||| |||||||||||||| || ||||||||||    
T  23736782 aatggttttggaatacaactcacagaaaccatttccacagcagaatggttttg 23736834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 53595521 - 53595573
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtt 53  Q
    |||||||| |||||||| ||||||||| |||||||||||||  ||||||||||    
T  53595521 caaaatggttttggagtccaactcacataaaccatttccactgcaaaatggtt 53595573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 8036987 - 8036933
Alignment:
Q  2 aaaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||| ||||||||||||||||   |||||||||||||  |||||||||||||    
T  8036987 aaaatggttttggagtacaactcaaggaaaccatttccaccgcaaaatggttttg 8036933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 14743590 - 14743643
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||  ||||||||| |||||| ||||||    
T  14743590 aaatggttttggagtacaactcacataaattatttccacagcaaaatagttttg 14743643  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 23755919 - 23755956
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  23755919 caaaatggttttggagtacaactcacagaaaccatttc 23755956  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 34562800 - 34562763
Alignment:
Q  1 caaaatgggtttggagtacaactcacaaaaaccatttc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  34562800 caaaatggttttggagtacaactcacagaaaccatttc 34562763  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 38
Target Start/End: Original strand, 8718768 - 8718796
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttc 38  Q
    |||||||||||||||||||||||||||||    
T  8718768 tttggagtacaactcacaaaaaccatttc 8718796  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 38
Target Start/End: Original strand, 9070655 - 9070683
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttc 38  Q
    |||||||||||||||||||||||||||||    
T  9070655 tttggagtacaactcacaaaaaccatttc 9070683  T

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Target: scaffold0097 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 14390 - 14446
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  14390 aatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttgacat 14446  T

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Target: scaffold0129 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 20109 - 20060
Alignment:
Q  11 ttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  20109 ttggagtacaactcacagaaacaatttccacaacaaaatggttttgacat 20060  T

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Target: scaffold0194 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 28433 - 28485
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  28433 aatggttttggagtacaactcacagaaaccatttccacagcaaaatggttttg 28485  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 96046 - 96098
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggtttt 55  Q
    |||||| |||||||||||| ||||| |||||||||||||| ||||||||||||    
T  96046 aaatggttttggagtacaaatcacagaaaccatttccacagcaaaatggtttt 96098  T

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Target: scaffold0455 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 7956 - 8002
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||    
T  7956 tttggagtacaactcaccaaaaccatttccacagcacaatggttttg 8002  T

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Target: scaffold0291 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 9707 - 9654
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| |||| ||||||||| |||||| ||||||    
T  9707 aaatggttttggagtacaactcacataaactatttccacagcaaaatagttttg 9654  T

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Target: scaffold0249 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 23723 - 23684
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaat 49  Q
    |||||||||||||||||| |||||||||||||| ||||||    
T  23723 tttggagtacaactcacagaaaccatttccacagcaaaat 23684  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 108654 - 108701
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttga 57  Q
    ||||||||||||||||| |||||||| |||||| || |||||||||||    
T  108654 tttggagtacaactcaccaaaaccatctccacagcacaatggttttga 108701  T

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Target: scaffold0534 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 9962 - 10008
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||| ||||||||||||||| || ||||||||||    
T  9962 tttggattacaactcaccaaaaccatttccacagcacaatggttttg 10008  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 37261 - 37303
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaa 46  Q
    ||||| |||||||||||||| |||||||| |||||||||||||    
T  37261 aatggttttggagtacaactgacaaaaactatttccacaacaa 37303  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 72567 - 72613
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| ||| ||||| |||| |||||||||||||    
T  72567 tttggagtacaactcacagaaatcatttgcacagcaaaatggttttg 72613  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 203182 - 203136
Alignment:
Q  10 tttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||||||||||||||| |||| ||||||||| |||||| ||||||    
T  203182 tttggagtacaactcacagaaacaatttccacagcaaaatagttttg 203136  T

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Target: scaffold0126 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 37680 - 37733
Alignment:
Q  3 aaatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttg 56  Q
    |||||| |||||||||||||||||| ||| ||||| |||| ||||||| |||||    
T  37680 aaatggttttggagtacaactcacagaaatcattttcacagcaaaatgattttg 37733  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 21885 - 21829
Alignment:
Q  4 aatgggtttggagtacaactcacaaaaaccatttccacaacaaaatggttttgacat 60  Q
    ||||| |||| |||||||||||| ||| ||||||||||| || |||| |||||||||    
T  21885 aatggttttgaagtacaactcaccaaacccatttccacagcacaatgattttgacat 21829  T

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