View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0947_low_83 (Length: 251)
Name: NF0947_low_83
Description: NF0947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0947_low_83 |
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Alignment Details
Target: chr1 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 31980469 - 31980227
Alignment:
| Q |
1 |
ttgaaattcttgatcataattgatggggaaggtgtagatgaagaaggcttttgaagaatttgatgatgatgttgatgtgaggaagcttcactgatagttg |
100 |
Q |
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| T |
31980469 |
ttgaaattcttgatcataattgatggggaaggtgtagatgaagaaggcttttgaagaatttgatgatgatgttgatgtgaggaagcttcactgatagttg |
31980370 |
T |
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| Q |
101 |
tagaaattggacttgtgggtggagattttgattcaagagttgaatttgaaaaacataggttgaggttcctcagatttcttgtgtttggcatgtttctatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31980369 |
tagaaattggacttgtgggtggagattttgattcaagagttgaatttgaaaaacataggttgaggttcctcagatttcttgtgtttggcatgtttctatg |
31980270 |
T |
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| Q |
201 |
tacttgtaaaatgaagatgtcaacattcaagaggccctttgct |
243 |
Q |
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| T |
31980269 |
tacttgtaaaatgaagatgtcaacattcaagaggccctttgct |
31980227 |
T |
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